Miyakogusa Predicted Gene

Lj2g3v3338860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3338860.1 tr|G7KEP4|G7KEP4_MEDTR Histidine kinase cytokinin
receptor OS=Medicago truncatula GN=MTR_5g097410 PE,75.86,0,seg,NULL;
CHASE,CHASE; coiled-coil,NULL; no description,NULL; no
description,CHASE; Homodimeric doma,CUFF.40055.1
         (641 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139...   617   e-177
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948...   508   e-144
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   445   e-125
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   444   e-125
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   444   e-125

>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
           chr5:13911743-13916337 REVERSE LENGTH=1176
          Length = 1176

 Score =  617 bits (1592), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 326/583 (55%), Positives = 391/583 (67%), Gaps = 42/583 (7%)

Query: 72  CEERAQALLQRYNVSRKQLHALASLISGSDQILS-NCIDERRLQMLLSSGIISPQLLMCP 130
           C    + L +  NV+R ++H L SL S SDQ+ S  C  E    M  + GI +  L +  
Sbjct: 60  CNGEEKVLYRHQNVTRSEIHDLVSLFSDSDQVTSFECHKESSPGMWTNYGI-TCSLSVRS 118

Query: 131 ENQELQ------------REHGCVADSLESIEQCPILDDLVQARLELSFPLIPXXXXXXX 178
           + QE +                C+  +LE I Q P   +       L   L         
Sbjct: 119 DKQETRGLPWNLGLGHSISSTSCMCGNLEPILQQPENLEEENHEEGLEQGL--------- 169

Query: 179 XXXXXXXXXXXXCGKDHVCSSNLIKGCCLVFTGILMCYKLSSFCLLWRSQKQKLVXXXXX 238
                              SS L      +  G+L+C+K+       R ++++ V     
Sbjct: 170 -------------------SSYLRNAWWCLILGVLVCHKIYVSHSKARGERKEKVHLQEA 210

Query: 239 XXXXXXXXFVQGPSKGAGKWWKRLLVVFVSLGIVGSGWLFWHLNTDIMQRRVEMLANMCD 298
                     Q  S+GAG+W K +L++ +  G+  S W FW  N +I+ +R E LANMCD
Sbjct: 211 LAPKKQQQRAQTSSRGAGRWRKNILLLGILGGVSFSVWWFWDTNEEIIMKRRETLANMCD 270

Query: 299 ERARMLQDQFNVSMNHVHALAILVSTFHHGKNPSAVDQKIFGEYTESTAFERPLTSGVAY 358
           ERAR+LQDQFNVS+NHVHAL+ILVSTFHHGK PSA+DQ+ F EYTE T FERPLTSGVAY
Sbjct: 271 ERARVLQDQFNVSLNHVHALSILVSTFHHGKIPSAIDQRTFEEYTERTNFERPLTSGVAY 330

Query: 359 AFKVLHSERIHFENQHGWTIKKMESENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSH 418
           A KV HSER  FE +HGW IKKME+E++ +VQDC+PEN DPAPIQDEYAPVIFAQETVSH
Sbjct: 331 ALKVPHSEREKFEKEHGWAIKKMETEDQTVVQDCVPENFDPAPIQDEYAPVIFAQETVSH 390

Query: 419 IVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNSKLPPDATVEQ 478
           IVS+DMMSG+EDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVY++ LPPDAT EQ
Sbjct: 391 IVSVDMMSGEEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYDTSLPPDATEEQ 450

Query: 479 RVEATVGYLGASYDIPSLVDKLLHQLASKQTIVVNVYDTTNASSPIAMYGTDVADTGLLK 538
           RVEAT+GYLGASYD+PSLV+KLLHQLASKQTI V+VYDTTN S  I MYG+++ D     
Sbjct: 451 RVEATIGYLGASYDMPSLVEKLLHQLASKQTIAVDVYDTTNTSGLIKMYGSEIGDISEQH 510

Query: 539 ISSIDFGDPLRKHEMHCRFKQRPPHPWTATNASVGVFVITLLLGYIFYAAINRIAEVEDD 598
           ISS+DFGDP R HEMHCRFK + P PWTA   S+ V VIT L+GYI Y AINRIA VE+D
Sbjct: 511 ISSLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFLVGYILYEAINRIATVEED 570

Query: 599 YRQMRKLKVRAEAAEVAKSQFLATVSHEIRTPTTGVLGNGKAL 641
            ++MR+LK RAEAA++AKSQFLATVSHEIRTP  GVLG  K L
Sbjct: 571 CQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKML 613


>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
           chr1:9487780-9492027 FORWARD LENGTH=1036
          Length = 1036

 Score =  508 bits (1308), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/389 (63%), Positives = 310/389 (79%), Gaps = 2/389 (0%)

Query: 250 GPSKGAGKWWKRLLVVFVSLGIVGSGWLFWHLNTDIMQRRVEMLANMCDERARMLQDQFN 309
           G  K    WW++L+VV+V   ++ S W FW+ ++  M++R E LA+MCDERARMLQDQFN
Sbjct: 83  GSVKFNKAWWRKLVVVWVVFWVLVSIWTFWYFSSQAMEKRKETLASMCDERARMLQDQFN 142

Query: 310 VSMNHVHALAILVSTFHHGKNPSAVDQKIFGEYTESTAFERPLTSGVAYAFKVLHSERIH 369
           VSMNHV A++IL+STFHHGK PSA+DQ+ F EYT+ T+FERPLTSGVAYA +VLHSER  
Sbjct: 143 VSMNHVQAMSILISTFHHGKIPSAIDQRTFSEYTDRTSFERPLTSGVAYAMRVLHSEREE 202

Query: 370 FENQHGWTIKKMES--ENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSG 427
           FE Q GWTI+KM S  +N     D   E L+P+P+Q+EYAPVIFAQ+TVSH+VS+DM+SG
Sbjct: 203 FERQQGWTIRKMYSLEQNPVHKDDYDLEALEPSPVQEEYAPVIFAQDTVSHVVSLDMLSG 262

Query: 428 KEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNSKLPPDATVEQRVEATVGYL 487
           KEDREN+LRAR+SGKGVLT+PF L+K+N LGV+LTFAVY   LP +AT ++R+EAT GYL
Sbjct: 263 KEDRENVLRARSSGKGVLTAPFPLIKTNRLGVILTFAVYKRDLPSNATPKERIEATNGYL 322

Query: 488 GASYDIPSLVDKLLHQLASKQTIVVNVYDTTNASSPIAMYGTDVADTGLLKISSIDFGDP 547
           G  +DI SLV+ LL QLASKQTI+VNVYD TN S PI+MYGT+V+  GL ++S + FGDP
Sbjct: 323 GGVFDIESLVENLLQQLASKQTILVNVYDITNHSQPISMYGTNVSADGLERVSPLIFGDP 382

Query: 548 LRKHEMHCRFKQRPPHPWTATNASVGVFVITLLLGYIFYAAINRIAEVEDDYRQMRKLKV 607
           LRKHEM CRFKQ+PP P  +   S G+ VI LL+ +I +A ++RI +VE+D  +M++LK 
Sbjct: 383 LRKHEMRCRFKQKPPWPVLSMVTSFGILVIALLVAHIIHATVSRIHKVEEDCDKMKQLKK 442

Query: 608 RAEAAEVAKSQFLATVSHEIRTPTTGVLG 636
           +AEAA+VAKSQFLATVSHEIRTP  GVLG
Sbjct: 443 KAEAADVAKSQFLATVSHEIRTPMNGVLG 471


>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-368016
           REVERSE LENGTH=1080
          Length = 1080

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/379 (58%), Positives = 277/379 (73%), Gaps = 16/379 (4%)

Query: 260 KRLLVVFVSLGIVGSGWLFWHLNTDIMQRRVEMLANMCDERARMLQDQFNVSMNHVHALA 319
           K L++  + +G + SG   W  + + + RR E+L +MCD+RARMLQDQF+VS+NHVHALA
Sbjct: 129 KALILWIIIVGFISSGIYQWMDDANKI-RREEVLVSMCDQRARMLQDQFSVSVNHVHALA 187

Query: 320 ILVSTFHHGKNPSAVDQKIFGEYTESTAFERPLTSGVAYAFKVLHSERIHFENQHGWTIK 379
           ILVSTFH+ KNPSA+DQ+ F EYT  TAFERPL SGVAYA KV++ ER  FE QH W IK
Sbjct: 188 ILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKVVNFEREMFERQHNWVIK 247

Query: 380 KMESENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARA 439
            M+               +P+P++DEYAPVIF+Q++VS++ S+DMMSG+EDRENILRAR 
Sbjct: 248 TMDRG-------------EPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENILRARE 294

Query: 440 SGKGVLTSPFKLLKSNHLGVVLTFAVYNSKLPPDATVEQRVEATVGYLGASYDIPSLVDK 499
           +GK VLTSPF+LL+++HLGVVLTF VY S LP + TVE+R+ AT GYLG ++D+ SLV+ 
Sbjct: 295 TGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVESLVEN 354

Query: 500 LLHQLASKQTIVVNVYDTTNASSPIAMYGT--DVADTGLLKISSIDFGDPLRKHEMHCRF 557
           LL QLA  Q IVV+VYD TNAS P+ MYG   + AD  L   S +DFGDP RKH+M CR+
Sbjct: 355 LLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKMICRY 414

Query: 558 KQRPPHPWTATNASVGVFVITLLLGYIFYAAINRIAEVEDDYRQMRKLKVRAEAAEVAKS 617
            Q+ P P          F I  L+GYI Y A   I +VEDD+ +M++LKVRAEAA+VAKS
Sbjct: 415 HQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKS 474

Query: 618 QFLATVSHEIRTPTTGVLG 636
           QFLATVSHEIRTP  G+LG
Sbjct: 475 QFLATVSHEIRTPMNGILG 493


>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-367429
           REVERSE LENGTH=1057
          Length = 1057

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/379 (58%), Positives = 277/379 (73%), Gaps = 16/379 (4%)

Query: 260 KRLLVVFVSLGIVGSGWLFWHLNTDIMQRRVEMLANMCDERARMLQDQFNVSMNHVHALA 319
           K L++  + +G + SG   W  + + + RR E+L +MCD+RARMLQDQF+VS+NHVHALA
Sbjct: 106 KALILWIIIVGFISSGIYQWMDDANKI-RREEVLVSMCDQRARMLQDQFSVSVNHVHALA 164

Query: 320 ILVSTFHHGKNPSAVDQKIFGEYTESTAFERPLTSGVAYAFKVLHSERIHFENQHGWTIK 379
           ILVSTFH+ KNPSA+DQ+ F EYT  TAFERPL SGVAYA KV++ ER  FE QH W IK
Sbjct: 165 ILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKVVNFEREMFERQHNWVIK 224

Query: 380 KMESENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARA 439
            M+               +P+P++DEYAPVIF+Q++VS++ S+DMMSG+EDRENILRAR 
Sbjct: 225 TMDRG-------------EPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENILRARE 271

Query: 440 SGKGVLTSPFKLLKSNHLGVVLTFAVYNSKLPPDATVEQRVEATVGYLGASYDIPSLVDK 499
           +GK VLTSPF+LL+++HLGVVLTF VY S LP + TVE+R+ AT GYLG ++D+ SLV+ 
Sbjct: 272 TGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVESLVEN 331

Query: 500 LLHQLASKQTIVVNVYDTTNASSPIAMYGT--DVADTGLLKISSIDFGDPLRKHEMHCRF 557
           LL QLA  Q IVV+VYD TNAS P+ MYG   + AD  L   S +DFGDP RKH+M CR+
Sbjct: 332 LLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKMICRY 391

Query: 558 KQRPPHPWTATNASVGVFVITLLLGYIFYAAINRIAEVEDDYRQMRKLKVRAEAAEVAKS 617
            Q+ P P          F I  L+GYI Y A   I +VEDD+ +M++LKVRAEAA+VAKS
Sbjct: 392 HQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKS 451

Query: 618 QFLATVSHEIRTPTTGVLG 636
           QFLATVSHEIRTP  G+LG
Sbjct: 452 QFLATVSHEIRTPMNGILG 470


>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-367429
           REVERSE LENGTH=1057
          Length = 1057

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/379 (58%), Positives = 277/379 (73%), Gaps = 16/379 (4%)

Query: 260 KRLLVVFVSLGIVGSGWLFWHLNTDIMQRRVEMLANMCDERARMLQDQFNVSMNHVHALA 319
           K L++  + +G + SG   W  + + + RR E+L +MCD+RARMLQDQF+VS+NHVHALA
Sbjct: 106 KALILWIIIVGFISSGIYQWMDDANKI-RREEVLVSMCDQRARMLQDQFSVSVNHVHALA 164

Query: 320 ILVSTFHHGKNPSAVDQKIFGEYTESTAFERPLTSGVAYAFKVLHSERIHFENQHGWTIK 379
           ILVSTFH+ KNPSA+DQ+ F EYT  TAFERPL SGVAYA KV++ ER  FE QH W IK
Sbjct: 165 ILVSTFHYHKNPSAIDQETFAEYTARTAFERPLLSGVAYAEKVVNFEREMFERQHNWVIK 224

Query: 380 KMESENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARA 439
            M+               +P+P++DEYAPVIF+Q++VS++ S+DMMSG+EDRENILRAR 
Sbjct: 225 TMDRG-------------EPSPVRDEYAPVIFSQDSVSYLESLDMMSGEEDRENILRARE 271

Query: 440 SGKGVLTSPFKLLKSNHLGVVLTFAVYNSKLPPDATVEQRVEATVGYLGASYDIPSLVDK 499
           +GK VLTSPF+LL+++HLGVVLTF VY S LP + TVE+R+ AT GYLG ++D+ SLV+ 
Sbjct: 272 TGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERIAATAGYLGGAFDVESLVEN 331

Query: 500 LLHQLASKQTIVVNVYDTTNASSPIAMYGT--DVADTGLLKISSIDFGDPLRKHEMHCRF 557
           LL QLA  Q IVV+VYD TNAS P+ MYG   + AD  L   S +DFGDP RKH+M CR+
Sbjct: 332 LLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSHESKLDFGDPFRKHKMICRY 391

Query: 558 KQRPPHPWTATNASVGVFVITLLLGYIFYAAINRIAEVEDDYRQMRKLKVRAEAAEVAKS 617
            Q+ P P          F I  L+GYI Y A   I +VEDD+ +M++LKVRAEAA+VAKS
Sbjct: 392 HQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKS 451

Query: 618 QFLATVSHEIRTPTTGVLG 636
           QFLATVSHEIRTP  G+LG
Sbjct: 452 QFLATVSHEIRTPMNGILG 470