Miyakogusa Predicted Gene
- Lj2g3v3337810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3337810.1 tr|B9HNH1|B9HNH1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_804402 PE=4 SV=1,26.22,6e-19,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.40048.1
(268 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 7e-67
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 202 2e-52
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 156 2e-38
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 3e-36
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 9e-36
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 9e-34
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 3e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 3e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 9e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 1e-32
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 135 2e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 3e-32
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 6e-32
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 6e-32
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 7e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 134 9e-32
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 1e-31
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 1e-31
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 1e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 132 3e-31
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 5e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 5e-31
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 7e-31
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 130 7e-31
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 2e-30
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 2e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 3e-30
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 5e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 5e-30
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 1e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 5e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 5e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 6e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 4e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 5e-28
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 6e-28
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 2e-27
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 3e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 118 4e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 6e-27
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 6e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 6e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 8e-26
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 4e-25
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 4e-25
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 4e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 108 3e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 8e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 9e-24
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 105 4e-23
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 4e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 104 5e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 5e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 104 6e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 7e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 8e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 103 1e-22
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 101 5e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 2e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 5e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 9e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 97 1e-20
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 95 5e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 94 8e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 89 4e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 7e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 9e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 84 1e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 83 2e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 82 3e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 3e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 8e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 77 1e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 76 2e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 75 4e-14
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 75 5e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 75 6e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 74 1e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 74 1e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 73 2e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 73 2e-13
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 73 2e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 70 1e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 70 1e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 9e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 66 2e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 3e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 64 9e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 62 6e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 6e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 7e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 61 7e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 59 3e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 59 5e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 58 6e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 58 7e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 58 7e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 57 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 57 2e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 57 2e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 56 2e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 56 3e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 56 3e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 3e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 56 3e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 5e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 5e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 55 7e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 55 7e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 7e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 9e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 53 2e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 8e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 51 9e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 50 1e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 50 2e-06
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 49 3e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 49 3e-06
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 7e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 8e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 9e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 9e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 1e-05
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 250 bits (639), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
Query: 1 MACKLLKEMRALGW-IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
MA LL+EM+ +PS+ TYTSVI V+QGN+ +A+RLKDEM++ G+ +N++ ATSL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ GHC D+ SAL LFD++ + G +PN+VTFSVLI+ K G MEKA E Y +M+++G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
P+VF V +++G+ K E A +L DE+ E G+A+V N +LSWLC GK EA L
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L KM S+G+ P++VSYN+++LGHCR+ MD A V + IL+KGLKPN TY+ LIDG F+
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 240 KGDFERAFGVFEQMMAAN 257
D + A V M ++N
Sbjct: 526 NHDEQNALEVVNHMTSSN 543
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +EM G P+ TYTS++ + + +AL ++DEM N GV ++I +L+
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ SA LF E++E G+ P+ ++ LI +G+M A +LY +M G++
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G K L A L E G + + Y ++++ L G+ V+ +
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
++M VTP+++ YN +I GH R+G +D+A+ + + +L KG+ P+ T+ L+ G
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG----- 67
G P+ TY+ +I C R + AL + + M +S + VN +V +++ G C +G
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 68 -------------------------------DINSALKLFDEIVEAGVAPNAVTFSVLID 96
+++SA+ ++E+ G++PN +T++ L++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 97 CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-A 155
K M++A E+ + MK G++ + L+ GF K++ +E+A L E +E G+
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
S YN L+S LG +V A +L KM+ G+ L +Y +I G + G + A +
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+ GL P+ + YT +++G KKG F + +FE+M N
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
+++ +QG EA L +M + G+ N++ ++M GHC +++ A +F I+E
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
G+ PN T+S+LID + + A E+ N M I+ + + ++ G K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 142 AYRLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A LL +E S ++YN ++ G++ A ++M G++P++++Y ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C+ MD A + + + KG+K + Y LIDGF K+ + E A +F +++ N
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+Y S+I ++G + A+ +EM +G+ N+I TSLM G C ++ AL++ DE+
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
GV + + LID K +ME A L++ + G+ P+ I L+ GF+ +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A L + ++ G+ + TY L+ L G ++ A L +M + G+ P + Y I
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ G +KG + + K + PN L Y +I G +++G+ + AF + ++M+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L E+ G PS+ Y S+I GN+V AL L +M+ G+ ++ T+L+
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G++ A +L+ E+ G+ P+ + ++V+++ SK G K +++ MK + P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ G ++ L+ A+RL DE ++ GI T++IL+S G + V A +L
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L EM+A+G +P E YT ++ ++G V+ +++ +EM + V N+++ +++
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSME 105
GH G+++ A +L DE+++ G+ P+ TF +L+ S ++G+++
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV--SGQVGNLQ 844
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 39 RLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCS 98
+L D + G VN L+ + + A+ + ++++E V P + +
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 99 SKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASV 157
+ S+ +A ELY+RM +G+ + L++ ++ A +L A+E G
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKGV-TPSLVSYNHIILGHCRKGCMDDAYSVMN 216
+ Y++ + C + A +LL +M K + PS +Y +IL ++G MDDA + +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 217 RILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+L G+ N + T LI G K D A +F++M
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
KL D G N+ F+ L++ SK + A ++ N+M + + P V L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
++N L A L V G+ VT +L+ K EA +L + + +G P
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGL-KPNALTYTPLIDGFFKKGDFERAFGVFE 251
+ Y+ + C+ + A S++ + +K L P+ TYT +I K+G+ + A + +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 252 QMMAANANLQITQFTPL 268
+M++ ++ + T L
Sbjct: 329 EMLSDGISMNVVAATSL 345
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 160/258 (62%), Gaps = 1/258 (0%)
Query: 1 MACKLLKEMRA-LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
MA LL+EMR LG S+ TYTSVI V++GN+ EA+R+ DEMV G+P+++I ATSL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ G+C ++ AL LF+ + E G+AP+ V FSV+++ K MEKA E Y RMK + I
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
P+ +V +++G K E A + +++ E IA N + C GKV A +
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M KG+ P++V YN+++L HCR MD A S+ + +L+KGL+PN TY+ LIDGFFK
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 240 KGDFERAFGVFEQMMAAN 257
D + A+ V QM A+N
Sbjct: 532 NKDEQNAWDVINQMNASN 549
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 127/240 (52%), Gaps = 1/240 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +EM G P+ T+TS+I + + AL + EM + + +++ +L+
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C D+ +A LF E+ E G+ PN ++ LI +G M+ A +LY +M GI
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F ++ G K + A L E ++ GI + + +L++ L G+ ++A +L
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M K VTP+++ Y+ +I GH R+G +++A+ + + +L+KG+ + + L+ G +K
Sbjct: 789 EEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 4/255 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
M L+KE R + S +Y S+I V+ G+ A+ EM +G N++ TSL+
Sbjct: 576 MLQNLIKEKR---YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C ++ AL++ E+ + + + LID K M+ A+ L++ + +G+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V + L+ GF+ ++ A L + V GI+ + TY ++ L G + A +L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+++ G+ P + + ++ G +KG A ++ + KK + PN L Y+ +I G +
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 240 KGDFERAFGVFEQMM 254
+G+ AF + ++M+
Sbjct: 813 EGNLNEAFRLHDEML 827
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 30 RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAV 89
+QG V A M G+ N++ ++M HC + +++ A +F E++E G+ PN
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
T+S+LID K + A+++ N+M + I ++ G K A +L
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 150 VEHGIASV--VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
++ S+ +YN ++ +G A +M G +P++V++ +I G C+
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
MD A + + + LK + Y LIDGF KK D + A+ +F ++
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P +V+ + VR + EA + ++MV GV + + LM+ A+K
Sbjct: 201 VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVK 260
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK-LMGIQPTVFIVKFLLKGF 133
+F ++ G P+ + FS+ + + K + A +L M+ +G+ + ++ F
Sbjct: 261 IFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAF 320
Query: 134 QKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K+ +E A R++DE V GI SV+ L++ C ++ +A +L ++M +G+ P
Sbjct: 321 VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
V ++ ++ C+ M+ A R+ + P+++ +I G K E A +F
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
++ A+ F +V+ V P + ++ + +++A E+YN+M L+G+ +
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK- 186
L++ ++ E A ++ + G + +++ + C +V A +LL +M K
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
GV S +Y +I+ ++G M++A VM+ ++ G+ + + T L++G+ K + +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 247 FGVFEQM 253
+F +M
Sbjct: 365 LDLFNRM 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L E+ LG +P E + ++ ++G ++A ++ +EM V N+++ ++++
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID-------CSSKIGSM 104
GH G++N A +L DE++E G+ + F++L+ +SKI S+
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSL 858
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
F+ L++ + M+ A + + M + P V V +L + N+++ A + ++ V
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
G+A VT +L+ K EA + ++MS+G P + ++ + C+ +
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 210 DAYSVMNRILKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
A ++ + K G+ + TYT +I F K+G+ E A V ++M+ + + T L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 148/252 (58%), Gaps = 1/252 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL+ M G P+ +Y VI R+G + E + EM G ++ + +L+KG+
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G+ + AL + E++ G+ P+ +T++ LI K G+M +A E ++M++ G+ P
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ GF ++ + AYR+L E ++G + SVVTYN L++ C GK+ +A +L+
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M KG++P +VSY+ ++ G CR +D+A V +++KG+KP+ +TY+ LI GF ++
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 243 FERAFGVFEQMM 254
+ A ++E+M+
Sbjct: 501 TKEACDLYEEML 512
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 133/246 (54%), Gaps = 2/246 (0%)
Query: 10 RALGWIPSEGTYTSVIGTCVR-QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
+A G++P +Y +V+ +R + N+ A + EM+ S V N+ L++G C G+
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
I+ AL LFD++ G PN VT++ LID K+ ++ F+L M L G++P +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G ++ ++ +L E G + VTYN L+ C G +A + +M+ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+TPS+++Y +I C+ G M+ A ++++ +GL PN TYT L+DGF +KG A+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 248 GVFEQM 253
V +M
Sbjct: 401 RVLREM 406
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 16/256 (6%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L++M+ G P +Y++V+ R +V EALR+K EMV G+ + I +SL++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C A L++E++ G+ P+ T++ LI+ G +EKA +L+N M G+ P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAV-EHGIASVVTYNILLS--------------- 165
V L+ G KQ+ A RLL + E + S VTY+ L+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 166 WLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP 225
C G + EA + + M+ K P +YN +I GHCR G + AY++ ++K G
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 226 NALTYTPLIDGFFKKG 241
+ +T L+ K+G
Sbjct: 674 HTVTVIALVKALHKEG 689
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 145/272 (53%), Gaps = 18/272 (6%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A ++L+EM G+ PS TY ++I G CV G + +A+ + ++M G+ +++ ++++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCV-TGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C D++ AL++ E+VE G+ P+ +T+S LI + ++A +LY M +G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P F L+ + + LE A +L +E VE G+ VVTY++L++ L + EA L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 180 LDKMMSKGVTPSLVSYN---------------HIILGHCRKGCMDDAYSVMNRILKKGLK 224
L K+ + PS V+Y+ +I G C KG M +A V +L K K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
P+ Y +I G + GD +A+ ++++M+ +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 2/212 (0%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG-SMEKAFELYNRMKLM 117
++K + L I+ AL + G P ++++ ++D + + ++ A ++ M
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEA 176
+ P VF L++GF ++ A L D+ G + +VVTYN L+ C L K+ +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
LL M KG+ P+L+SYN +I G CR+G M + V+ + ++G + +TY LI G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 237 FFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ K+G+F +A + +M+ + +T L
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 51/279 (18%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +EM G P TY+S+I Q EA L +EM+ G+P + T+L+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C+ GD+ AL+L +E+VE GV P+ VT+SVLI+ +K +A L ++ P
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 122 TVFI----------VKF-----LLKGFQKQNMLENAYRLLDEAV-EHGIASVVTYNILLS 165
+ ++F L+KGF + M+ A ++ + + ++ YNI++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 166 WLCGLGKVVEACNLLDKMMSKGVTPSLVS----------------YNHII---LGHC--- 203
C G + +A L +M+ G V+ N +I L C
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 204 -------------RKGCMDDAYSVMNRILKKGLKPNALT 229
R+G MD V+ + K G PN ++
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 142/253 (56%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K EM + P TYT++I + G++VEA +L EM G+ + + T L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G + A ++ + +++AG +PN VT++ LID K G ++ A EL + M +G+QP
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F ++ G K +E A +L+ E G+ A VTY L+ C G++ +A +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ KG+ P++V++N ++ G C G ++D ++N +L KG+ PNA T+ L+ + +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 241 GDFERAFGVFEQM 253
+ + A +++ M
Sbjct: 610 NNLKAATAIYKDM 622
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 143/266 (53%), Gaps = 1/266 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL++ M+ G P+ Y S+IG R + EA EM+ G+ + +V T+L+ G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C GDI +A K F E+ + P+ +T++ +I +IG M +A +L++ M G++P
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G+ K +++A+R+ + ++ G + +VVTY L+ LC G + A LL +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M G+ P++ +YN I+ G C+ G +++A ++ GL + +TYT L+D + K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
++A + ++M+ I F L
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M G P+ TYT++I ++G++ A L EM G+ NI S++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+I A+KL E AG+ + VT++ L+D K G M+KA E+ M G+QP
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T+ L+ GF MLE+ +LL+ + GIA + T+N L+ C + A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S+GV P +Y +++ GHC+ M +A+ + + KG + TY+ LI GF K+
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 241 GDFERAFGVFEQM 253
F A VF+QM
Sbjct: 680 KKFLEAREVFDQM 692
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 7/273 (2%)
Query: 3 CKL------LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVA 56
CKL EM G +P YT++I ++G++ A + EM + + +++
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
T+++ G C +GD+ A KLF E+ G+ P++VTF+ LI+ K G M+ AF ++N M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
G P V L+ G K+ L++A LL E + G+ ++ TYN +++ LC G + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A L+ + + G+ V+Y ++ +C+ G MD A ++ +L KGL+P +T+ L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
GF G E + M+A T F L
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +E +G + +Y VI + G + EA L M G ++I ++++ G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+++ KL + + G+ PN+ + +I +I + +A E ++ M GI P
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ GF K+ + A + E I V+TY ++S C +G +VEA L +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG+ P V++ +I G+C+ G M DA+ V N +++ G PN +TYT LIDG K+GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 244 ERAFGVFEQM 253
+ A + +M
Sbjct: 473 DSANELLHEM 482
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 145/268 (54%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL EM G P T+T +I + G++ +A R+ + M+ +G N++ T+L+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD++SA +L E+ + G+ PN T++ +++ K G++E+A +L + G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ + K ++ A +L E + G+ ++VT+N+L++ C G + + LL
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M++KG+ P+ ++N ++ +C + + A ++ + +G+ P+ TY L+ G K
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
+ + A+ +F++M ++ ++ ++ L
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL M G+ P +Y++V+ R G + + +L + M G+ N + S++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + + A + F E++ G+ P+ V ++ LID K G + A + + M I P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF + + A +L E G+ VT+ L++ C G + +A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+ G +P++V+Y +I G C++G +D A +++ + K GL+PN TY +++G K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G+ E A + + AA N +T L
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 47/242 (19%)
Query: 70 NSALKLFDEIV----EAGVAPNA--VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+S ++ FD +V + G P V F VL+D G + +A ++ +M G+ +V
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVD----FGLLREARRVFEKMLNYGLVLSV 210
Query: 124 FIVKFLLKGFQKQ-NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
L K A + E E G+ +V +YNI++ ++C LG++ EA +LL
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA-------------- 227
M KG TP ++SY+ ++ G+CR G +D + ++ + +KGLKPN+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 228 ---------------------LTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+ YT LIDGF K+GD A F +M + + + +T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 267 PL 268
+
Sbjct: 391 AI 392
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 35/190 (18%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ E A G TYT+++ + G + +A + EM+ G+ I+ LM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID------------------CSSKIG- 102
G CL G + KL + ++ G+APNA TF+ L+ CS +G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 103 ----------------SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+M++A+ L+ MK G +V L+KGF K+ A +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 147 DEAVEHGIAS 156
D+ G+A+
Sbjct: 690 DQMRREGLAA 699
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL M A G P+ T+ S++ + N+ A + +M + GV + +L+KGH
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C ++ A LF E+ G + + T+SVLI K +A E++++M+ G+
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
I F K + +DE +E+
Sbjct: 702 EIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 142/253 (56%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K EM + P TYT++I + G++VEA +L EM G+ + + T L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G + A ++ + +++AG +PN VT++ LID K G ++ A EL + M +G+QP
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F ++ G K +E A +L+ E G+ A VTY L+ C G++ +A +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ KG+ P++V++N ++ G C G ++D ++N +L KG+ PNA T+ L+ + +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 241 GDFERAFGVFEQM 253
+ + A +++ M
Sbjct: 610 NNLKAATAIYKDM 622
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 143/266 (53%), Gaps = 1/266 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL++ M+ G P+ Y S+IG R + EA EM+ G+ + +V T+L+ G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C GDI +A K F E+ + P+ +T++ +I +IG M +A +L++ M G++P
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G+ K +++A+R+ + ++ G + +VVTY L+ LC G + A LL +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M G+ P++ +YN I+ G C+ G +++A ++ GL + +TYT L+D + K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
++A + ++M+ I F L
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M G P+ TYT++I ++G++ A L EM G+ NI S++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+I A+KL E AG+ + VT++ L+D K G M+KA E+ M G+QP
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T+ L+ GF MLE+ +LL+ + GIA + T+N L+ C + A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S+GV P +Y +++ GHC+ M +A+ + + KG + TY+ LI GF K+
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 241 GDFERAFGVFEQM 253
F A VF+QM
Sbjct: 680 KKFLEAREVFDQM 692
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 7/273 (2%)
Query: 3 CKL------LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVA 56
CKL EM G +P YT++I ++G++ A + EM + + +++
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
T+++ G C +GD+ A KLF E+ G+ P++VTF+ LI+ K G M+ AF ++N M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
G P V L+ G K+ L++A LL E + G+ ++ TYN +++ LC G + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A L+ + + G+ V+Y ++ +C+ G MD A ++ +L KGL+P +T+ L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
GF G E + M+A T F L
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +E +G + +Y VI + G + EA L M G ++I ++++ G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+++ KL + + G+ PN+ + +I +I + +A E ++ M GI P
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ GF K+ + A + E I V+TY ++S C +G +VEA L +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG+ P V++ +I G+C+ G M DA+ V N +++ G PN +TYT LIDG K+GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 244 ERAFGVFEQM 253
+ A + +M
Sbjct: 473 DSANELLHEM 482
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 145/268 (54%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL EM G P T+T +I + G++ +A R+ + M+ +G N++ T+L+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD++SA +L E+ + G+ PN T++ +++ K G++E+A +L + G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ + K ++ A +L E + G+ ++VT+N+L++ C G + + LL
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M++KG+ P+ ++N ++ +C + + A ++ + +G+ P+ TY L+ G K
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
+ + A+ +F++M ++ ++ ++ L
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL M G+ P +Y++V+ R G + + +L + M G+ N + S++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + + A + F E++ G+ P+ V ++ LID K G + A + + M I P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF + + A +L E G+ VT+ L++ C G + +A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+ G +P++V+Y +I G C++G +D A +++ + K GL+PN TY +++G K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G+ E A + + AA N +T L
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 47/242 (19%)
Query: 70 NSALKLFDEIV----EAGVAPNA--VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+S ++ FD +V + G P V F VL+D G + +A ++ +M G+ +V
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVD----FGLLREARRVFEKMLNYGLVLSV 210
Query: 124 FIVKFLLKGFQKQ-NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
L K A + E E G+ +V +YNI++ ++C LG++ EA +LL
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA-------------- 227
M KG TP ++SY+ ++ G+CR G +D + ++ + +KGLKPN+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 228 ---------------------LTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+ YT LIDGF K+GD A F +M + + + +T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 267 PL 268
+
Sbjct: 391 AI 392
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 35/190 (18%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ E A G TYT+++ + G + +A + EM+ G+ I+ LM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID------------------CSSKIG- 102
G CL G + KL + ++ G+APNA TF+ L+ CS +G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 103 ----------------SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+M++A+ L+ MK G +V L+KGF K+ A +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 147 DEAVEHGIAS 156
D+ G+A+
Sbjct: 690 DQMRREGLAA 699
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL M A G P+ T+ S++ + N+ A + +M + GV + +L+KGH
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C ++ A LF E+ G + + T+SVLI K +A E++++M+ G+
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
I F K + +DE +E+
Sbjct: 702 EIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L ++M S Y+ VI + + G+ +AL L +EM G+ +++ +SL+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G + K+ E++ + P+ VTFS LID K G + +A ELYN M GI
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF K+N L A ++ D V G +VTY+IL++ C +V + L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
++ SKG+ P+ ++YN ++LG C+ G ++ A + ++ +G+ P+ +TY L+DG
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
G+ +A +FE+M + L I
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGI 490
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 133/251 (52%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+L+EM IP T++++I V++G ++EA L +EM+ G+ + I SL+ G
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C ++ A ++FD +V G P+ VT+S+LI+ K ++ L+ + G+ P
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ GF + L A L E V G+ SVVTY ILL LC G++ +A + +K
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M +T + YN II G C +DDA+S+ + KG+KP+ +TY +I G KKG
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 243 FERAFGVFEQM 253
A +F +M
Sbjct: 541 LSEADMLFRKM 551
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 138/258 (53%), Gaps = 1/258 (0%)
Query: 12 LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
LG+ P T+++++ +G V EA+ L D MV +++ ++L+ G CL G ++
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
AL L D +VE G P+ VT+ +++ K G+ A +L+ +M+ I+ +V ++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 132 GFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
K ++A L +E GI A VVTY+ L+ LC GK + +L +M+ + + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+V+++ +I ++G + +A + N ++ +G+ P+ +TY LIDGF K+ A +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 251 EQMMAANANLQITQFTPL 268
+ M++ I ++ L
Sbjct: 374 DLMVSKGCEPDIVTYSIL 391
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M + G P TY+ +I + + V + +RL E+ + G+ N I +L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G +N+A +LF E+V GV P+ VT+ +L+D G + KA E++ +M+ +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ I ++ G + +++A+ L + G+ VVTYN+++ LC G + EA L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 181 DKMMSKGVTPSLVSYNHIILGH 202
KM G TP +YN +I H
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAH 570
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T T +I R+ ++ A + G + I ++L+ G CL G ++ A+ L D +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
VE P+ VT S LI+ G + +A L +RM G QP +L K
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A L + E I ASVV Y+I++ LC G +A +L ++M KG+ +V+Y+ +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
I G C G DD ++ ++ + + P+ +T++ LID F K+G A ++ +M+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 47 SGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEK 106
+G+ ++ T ++ +C + A + + G P+ +TFS L++ G + +
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 107 AFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLS 165
A L +RM M +P + V L+ G + + A L+D VE+G VTY +L+
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 166 WLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP 225
LC G A +L KM + + S+V Y+ +I C+ G DDA S+ N + KG+K
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 226 NALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ +TY+ LI G G ++ + +M+ N + F+ L
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 37/181 (20%)
Query: 4 KLLKEMRALGWIPSEGTY-TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
+L +E+ + G IP+ TY T V+G C + G + A L EMV+ GVP +++ L+ G
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 63 HCLLGDINSALKLFDE-----------------------------------IVEAGVAPN 87
C G++N AL++F++ + + GV P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
VT++V+I K GS+ +A L+ +MK G P F L++ + L ++ L++
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 148 E 148
E
Sbjct: 585 E 585
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL EMR G P TY ++ ++G + EA++ ++M +SG N+I +++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G A KL +++ G +P+ VTF++LI+ + G + +A ++ +M G QP
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
LL GF K+ ++ A L+ V G +VTYN +L+ LC GKV +A +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+++ SKG +P L++YN +I G + G A +++ + K LKP+ +TY+ L+ G ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 241 GDFERA---FGVFEQM 253
G + A F FE+M
Sbjct: 498 GKVDEAIKFFHEFERM 513
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 144/268 (53%), Gaps = 4/268 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L+ + G +P TY +I + G + AL + D M V +++ ++++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G + A+++ D +++ P+ +T+++LI+ + + + A +L + M+ G P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ G K+ L+ A + L++ G +V+T+NI+L +C G+ ++A LL
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+ KG +PS+V++N +I CRKG + A ++ ++ + G +PN+L+Y PL+ GF K+
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
+RA E+M++ I + +
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TY +++ + G + +A+ + D M+ ++I T L++ C + A+KL
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
DE+ + G P+ VT++VL++ K G +++A + N M G QP V +L+
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+A +LL + + G + SVVT+NIL+++LC G + A ++L+KM G P+ +S
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YN ++ G C++ MD A + R++ +G P+ +TY ++ K G E A + Q+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L M P TYT +I R V A++L DEM + G +++ L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A+K +++ +G PN +T ++++ G A +L M G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+V L+ ++ +L A +L++ +HG + ++YN LL C K+ A L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M+S+G P +V+YN ++ C+ G ++DA ++N++ KG P +TY +IDG K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G +A + ++M A + ++ L
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
VR G + E + + MV G +II T+L++G C LG A K+ + + +G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
+T++V+I K G + A + +R M + P V +L+ L+ A +LD
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 149 AVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
++ V+TY IL+ C V A LLD+M +G TP +V+YN ++ G C++G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTP 267
+D+A +N + G +PN +T+ ++ G + A + M+ + + F
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 268 L 268
L
Sbjct: 350 L 350
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL +M G+ PS T+ +I R+G + A+ + ++M G N + L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ A++ + +V G P+ VT++ ++ K G +E A E+ N++ G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ G K A +LLDE + +TY+ L+ L GKV EA
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ G+ P+ V++N I+LG C+ D A + ++ +G KPN +YT LI+G +
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 241 GDFERAFGVFEQM 253
G + A + ++
Sbjct: 568 GMAKEALELLNEL 580
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L++M G P+ +Y ++ ++ + A+ + MV+ G +I+ +++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G + A+++ +++ G +P +T++ +ID +K G KA +L + M+ ++P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ G ++ ++ A + E GI + VT+N ++ LC + A + L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
M+++G P+ SY +I G +G +A ++N + KGL
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 144/259 (55%), Gaps = 1/259 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
++ G IP YT +I R+G + A+ L++EM+ G ++++ +++ G C
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ A KLF+E+ E + P++ T ++LID K+G+++ A EL+ +MK I+ V
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
LL GF K ++ A + + V I + ++Y+IL++ LC G + EA + D+M+SK
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ P+++ N +I G+CR G D S + +++ +G P+ ++Y LI GF ++ + +AF
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 248 GVFEQMMAANANLQITQFT 266
G+ ++M L FT
Sbjct: 641 GLVKKMEEEQGGLVPDVFT 659
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 133/255 (52%), Gaps = 1/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L+ M G+ P TY +VI + G A + EM+ SG+ + SL+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C GD+ K+F ++ V P+ V FS ++ ++ G+++KA +N +K G+ P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
I L++G+ ++ M+ A L +E ++ G A VVTYN +L LC + EA L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M + + P + +I GHC+ G + +A + ++ +K ++ + +TY L+DGF K
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 241 GDFERAFGVFEQMMA 255
GD + A ++ M++
Sbjct: 529 GDIDTAKEIWADMVS 543
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL EM P T T +I + GN+ A+ L +M + ++++ +L+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +GDI++A +++ ++V + P +++S+L++ G + +AF +++ M I+P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
TV I ++KG+ + + L++ + G + ++YN L+ + +A L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 181 DKMMSK--GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
KM + G+ P + +YN I+ G CR+ M +A V+ +++++G+ P+ TYT +I+GF
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 239 KKGDFERAFGVFEQMM 254
+ + AF + ++M+
Sbjct: 704 SQDNLTEAFRIHDEML 719
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
+R+ G+ S ++IG+ VR G V A + E+ SGV +N+ ++ C G
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ ++ E GV P+ VT++ LI S G ME+AFEL N M G P V+
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G K E A + E + G++ TY LL C G VVE + M S+
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
V P LV ++ ++ R G +D A N + + GL P+ + YT LI G+ +KG A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 248 GVFEQMMAANANLQITQFTPL 268
+ +M+ + + + +
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTI 451
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L EM G TY +++ ++ + EA +L +EM + + T L+
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GHC LG++ +A++LF ++ E + + VT++ L+D K+G ++ A E++ M I
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
PT L+ + L A+R+ DE + I +V+ N ++ C G + +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK--GLKPNALTYTPLIDGF 237
L+KM+S+G P +SYN +I G R+ M A+ ++ ++ ++ GL P+ TY ++ GF
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFT 266
++ + A V +M+ N + +T
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 130/265 (49%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +++ G P TY ++I +G + EA L + M G + +++ G C
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G A ++F E++ +G++P++ T+ L+ + K G + + ++++ M+ + P +
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKM 183
++ F + L+ A + E G I V Y IL+ C G + A NL ++M
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ +G +V+YN I+ G C++ + +A + N + ++ L P++ T T LIDG K G+
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
+ A +F++M L + + L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTL 521
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+ N F +LI + + +A E + ++ G ++ L+ + +E
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 142 AYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A+ + E G+ +V T NI+++ LC GK+ + L ++ KGV P +V+YN +I
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
+ KG M++A+ +MN + KG P TY +I+G K G +ERA VF +M+ + +
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 261 QITQFTPL 268
T + L
Sbjct: 339 DSTTYRSL 346
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
++ + +I T V+ + EA + + G V+I +L+ +G + A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
EI +GV N T +++++ K G MEK ++++ G+ P + L+ + +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 137 NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
++E A+ L++ G + V TYN +++ LC GK A + +M+ G++P +Y
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+++ C+KG + + V + + + + P+ + ++ ++ F + G+ ++A F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 256 A 256
A
Sbjct: 404 A 404
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 144/268 (53%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L+EM+ +G +P +Y +I C G++ A +DEMV G+ +L+
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + I +A L EI E G+ ++VT+++LI+ + G +KAF L++ M GIQP
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
T F L+ ++N A L ++ V G+ +V N L+ C +G + A +LL
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M + P V+YN ++ G C +G ++A +M + ++G+KP+ ++Y LI G+ KK
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
GD + AF V ++M++ N + + L
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 1/233 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L++E+R G + TY +I + G+ +A L DEM+ G+ TSL+ C
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
A +LF+++V G+ P+ V + L+D IG+M++AF L M +M I P
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L++G + E A L+ E GI ++YN L+S G A + D+M
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+S G P+L++YN ++ G + + A ++ + +G+ PN ++ +I+
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
L I +A + ++ + N TF+++I+ K G ++KA M++ GI+PT+
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L++GF + +E A ++ E G + TYN +LSW+C G+ E +L +M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMK 319
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP------------------- 225
G+ P VSYN +I G G ++ A++ + ++K+G+ P
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 226 ----------------NALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+++TY LI+G+ + GD ++AF + ++MM +Q TQFT
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT--DGIQPTQFT 434
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 70 NSALKLFDEIVEAG---VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
NS LFDE+V A + + F +L+ C ++ +++A E + MK G P
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+L + N +ENA+ + I S V T+NI+++ LC GK+ +A L M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G+ P++V+YN ++ G +G ++ A +++ + KG +P+ TY P++ +G R
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---R 310
Query: 246 AFGVFEQM 253
A V +M
Sbjct: 311 ASEVLREM 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LLKEM + P + TY ++ +G EA L EM G+ + I +L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ GD A + DE++ G P +T++ L+ SK E A EL MK GI P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 139/258 (53%), Gaps = 1/258 (0%)
Query: 12 LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
LG+ P+ T++++I +G V EAL L D MV G ++I +L+ G CL G
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A+ L D++VE G PNAVT+ +++ K G A EL +M+ I+ ++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 132 GFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
G K L+NA+ L +E GI + ++TYNIL+ C G+ + LL M+ + + P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
++V+++ +I ++G + +A + ++ +G+ P+ +TYT LIDGF K+ ++A +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 251 EQMMAANANLQITQFTPL 268
+ M++ + I F L
Sbjct: 392 DLMVSKGCDPNIRTFNIL 409
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL++M Y+ +I + G++ A L +EM G+ NII L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G + KL ++++ + PN VTFSVLID K G + +A EL+ M GI
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF K+N L+ A +++D V G ++ T+NIL++ C ++ + L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
KM +GV V+YN +I G C G ++ A + ++ + + PN +TY L+DG
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
G+ E+A +FE++ + L I
Sbjct: 486 NGESEKALEIFEKIEKSKMELDI 508
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL++M P+ T++ +I + V++G + EA L EM++ G+ + I TSL+ G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C ++ A ++ D +V G PN TF++LI+ K ++ EL+ +M L G+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L++GF + L A L E V + ++VTY ILL LC G+ +A + +K
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ + + YN II G C +DDA+ + + KG+KP TY +I G KKG
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 243 FERAFGVFEQM 253
A +F +M
Sbjct: 559 LSEAELLFRKM 569
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++M +P+ ++ + + L L +M G+ N+ + ++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + A +I++ G PN +TFS LI+ G + +A EL +RM MG +P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ + L+ G A L+D+ VE+G + VTY +L+ +C G+ A LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM + + V Y+ II G C+ G +D+A+++ N + KG+ N +TY LI GF
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G ++ + M+ N + F+ L
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++ M + G P+ T+ +I + + + L L +M GV + + +L++
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C LG +N A +LF E+V V PN VT+ +L+D G EKA E++ ++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI------- 499
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+K M ++ GI YNI++ +C KV +A +L
Sbjct: 500 ------------EKSKM----------ELDIGI-----YNIIIHGMCNASKVDDAWDLFC 532
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+ KGV P + +YN +I G C+KG + +A + ++ + G P+ TY LI G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 242 DFERAFGVFEQM 253
D ++ + E++
Sbjct: 593 DATKSVKLIEEL 604
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A+ L +M++S +I + L + L L ++ G+A N T S++I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-I 154
+C + + AF ++ +G +P L+ G + + A L+D VE G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
++T N L++ LC GK EA L+DKM+ G P+ V+Y ++ C+ G A +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ ++ ++ +K +A+ Y+ +IDG K G + AF +F +M I + L
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G++P + TY S+I +G AL L +E + G+ N+I+ +L+KG G I A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+L +E+ E G+ P TF++L++ K+G + A L M G P +F L+ G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ Q +ENA +LD +++G+ V TYN LL+ LC K + M+ KG P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
L ++N ++ CR +D+A ++ + K + P+A+T+ LIDGF K GD + A+ +F
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 252 QMMAANANLQITQFTP 267
+M A +++ TP
Sbjct: 591 KMEEA---YKVSSSTP 603
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P TY ++I + EA +MVN G+ + +L+ G+C G + A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++ + V G P+ T+ LID G +A L+N GI+P V + L+KG
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 133 FQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
Q M+ A +L +E E G I V T+NIL++ LC +G V +A L+ M+SKG P
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+ ++N +I G+ + M++A +++ +L G+ P+ TY L++G K FE ++
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 252 QMM 254
M+
Sbjct: 521 TMV 523
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L E G P+ Y ++I QG ++EA +L +EM G+ + L+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G ++ A L ++ G P+ TF++LI S ME A E+ + M G+ P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V+ LL G K + E+ VE G A ++ T+NILL LC K+ EA LL
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFK 239
++M +K V P V++ +I G C+ G +D AY++ ++ + + + TY +I F +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 240 KGDFERAFGVFEQMM 254
K + A +F++M+
Sbjct: 615 KLNVTMAEKLFQEMV 629
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ MR G P ++T + + + ALRL + M + G +N++ +++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +LF +++ +GV+ TF+ L+ K G +++ +L +++ G+ P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F ++G ++ L+ A R++ +E G V+TYN L+ LC K EA L
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM+++G+ P +YN +I G+C+ G + A ++ + G P+ TY LIDG +
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G+ RA +F + + + + L
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTL 397
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
EG Y + R+G V EA+ + + M + ++M G + A K++
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
+ + G+ P+ +F++ + K A L N M G + V ++ GF ++N
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 138 MLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
Y L + + G++ + T+N LL LC G V E LLDK++ +GV P+L +YN
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
I G C++G +D A ++ ++++G KP+ +TY LI G K F+ A
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + M P+ +Y +++ V G +A ++ M + G+ ++ T MK
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++AL+L + + G N V + ++ + + +EL+ +M G+
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL+ K+ ++ +LLD+ ++ G+ ++ TYN+ + LC G++ A ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++ +G P +++YN++I G C+ +A + +++ +GL+P++ TY LI G+ K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 241 G 241
G
Sbjct: 335 G 335
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+K M + G+ P T+ +I Q + AL + D M+++GV ++ SL+ G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
++ + +VE G APN TF++L++ + +++A L MK + P
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 125 IVKFLLKGFQKQNMLENAY---RLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
L+ GF K L+ AY R ++EA + +S TYNI++ V A L
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS-SSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M+ + + P +Y ++ G C+ G ++ Y + +++ G P+ T +I+ +
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 242 DFERAFGVFEQMM 254
A G+ +M+
Sbjct: 687 RVYEAAGIIHRMV 699
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K M G P+ T+ ++ + R + EAL L +EM N V + + +L+ G C
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 67 GDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
GD++ A LF ++ EA V+ + T++++I ++ ++ A +L+ M + P +
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+ ++ GF K + Y+ L E +E+G I S+ T +++ LC +V EA ++ +M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 185 SKGVTPSLVS 194
KG+ P V+
Sbjct: 700 QKGLVPEAVN 709
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 58/113 (51%)
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
+V +YN ++S L G +A + +M +G+TP + S+ + C+ A ++
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
N + +G + N + Y ++ GF+++ + +F +M+A+ +L ++ F L
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKL 222
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G P+ TY + I + A + EM GV N ++ T L+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C G + A + +V+ G+ +A T++VL++ K ++ A E++ M+ GI P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ GF K ++ A + DE VE G+ +V+ YN+LL C G++ +A LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M KG+ P+ V+Y II G+C+ G + +A+ + + + KGL P++ YT L+DG +
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 241 GDFERAFGVF 250
D ERA +F
Sbjct: 746 NDVERAITIF 755
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 4/259 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +EMR G P +Y +I + GN+ +A + DEMV G+ N+I+ L+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+I A +L DE+ G+ PNAVT+ +ID K G + +AF L++ MKL G+ P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
F+ L+ G + N +E A + + +S +N L++W+ GK +L+
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 182 KMMSKGVT----PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
++M P+ V+YN +I C++G ++ A + +++ L P +TYT L++G+
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 238 FKKGDFERAFGVFEQMMAA 256
K G F VF++ +AA
Sbjct: 851 DKMGRRAEMFPVFDEAIAA 869
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 39/306 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K +KEMR G +P++ T +I ++G V+EA MV+ G+ + T LM
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G ++ A ++F E+ G+AP+ ++ VLI+ SK+G+M+KA +++ M G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V I LL GF + +E A LLDE G+ + VTY ++ C G + EA L
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 181 DKMMSKGVTPSLVSYNHIILGHCR---------------KGCMDDA-------------- 211
D+M KG+ P Y ++ G CR KGC
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 212 -----YSVMNRILKKGL----KPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQI 262
V+NR++ KPN +TY +ID K+G+ E A +F QM AN +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 263 TQFTPL 268
+T L
Sbjct: 841 ITYTSL 846
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 36/288 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++KEM A G P+ YT++I T ++ +A+R+ EM G+ +I SL+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID------------------------- 96
G ++ A E+VE G+ PNA T+ I
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 97 ----CSS------KIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
C+ K G + +A Y M GI L+ G K + +++A +
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 147 DEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
E GIA V +Y +L++ LG + +A ++ D+M+ +G+TP+++ YN ++ G CR
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G ++ A +++ + KGL PNA+TY +IDG+ K GD AF +F++M
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L M A G IP Y S+I R+ NV + L EM + ++ +++K
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD++ A + E++ +G PN V ++ LI + A + MK GI P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSW-------------- 166
+F L+ G K ++ A L E VE+G+ + TY +S
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 167 ---------------------LCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
C GKV+EAC+ M+ +G+ +Y ++ G +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+DDA + + KG+ P+ +Y LI+GF K G+ ++A +F++M+
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL + M G +P + TY +I + + +A L EM + GV ++ + L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + ++A L E+V G+ + I SK G MEKA L++ M G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++G+ ++ + Y LL E + I S TY ++ +C G + A N++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 181 DKMMS-----------------------------------KGVTPSLVSYNHIILGHCRK 205
+M++ +G+ P + YN +I+G +
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
MD+A S + +++ GLKPNA TY I G+ + +F A ++M
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 40/287 (13%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+ EM + G Y I ++G + +A L D M+ SG+ SL++G+C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGIQPT 122
++ +L E+ + + + T+ ++ CSS G ++ A+ + M G +P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS--GDLDGAYNIVKEMIASGCRPN 451
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
V I L+K F + + +A R+L E E GIA + YN L+ L ++ EA + L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 182 KMMSKGVTPSLVSYNHIILG-----------------------------------HCRKG 206
+M+ G+ P+ +Y I G +C+KG
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ +A S ++ +G+ +A TYT L++G FK + A +F +M
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+++ ALKL + ++ G+ P T+ VLID KI +E A L M +G+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G K + A L+ E V HGI Y+ + + G + +A L D M++
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G+ P +Y +I G+CR+ + Y ++ + K+ + + TY ++ G GD + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 247 FGVFEQMMAANANLQITQFTPL 268
+ + ++M+A+ + +T L
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTL 458
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL++M Y+ +I + G++ A L +EM G +II+ T+L+
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G + KL ++++ + P+ V FS LIDC K G + +A EL+ M GI
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF K+N L+ A +LD V G ++ T+NIL++ C + + L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
KM +GV V+YN +I G C G ++ A + ++ + ++P+ ++Y L+DG
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
G+ E+A +FE++ + L I
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDI 492
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 132/258 (51%), Gaps = 1/258 (0%)
Query: 12 LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
LG+ P T++++I +G V EAL L D MV G +I +L+ G CL G ++
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A+ L D +VE G PN VT+ ++ K G A EL +M+ I+ ++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 132 GFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
G K L+NA+ L +E G A ++ Y L+ C G+ + LL M+ + +TP
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+V+++ +I ++G + +A + ++++G+ P+ +TYT LIDGF K+ ++A +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 251 EQMMAANANLQITQFTPL 268
+ M++ I F L
Sbjct: 376 DLMVSKGCGPNIRTFNIL 393
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL++M P ++++I V++G + EA L EM+ G+ + + TSL+ G
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C ++ A + D +V G PN TF++LI+ K ++ EL+ +M L G+
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L++GF + LE A L E V + +V+Y ILL LC G+ +A + +K
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ + + YN II G C +DDA+ + + KG+KP+ TY +I G KKG
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 243 FERAFGVFEQM 253
A +F +M
Sbjct: 543 LSEADLLFRKM 553
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L KEM G P TYTS+I ++ + +A + D MV+ G NI L+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C I+ L+LF ++ GV + VT++ LI ++G +E A EL+ M ++P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ K LL G E A + ++ + + + YNI++ +C KV +A +L
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ KGV P + +YN +I G C+KG + +A + ++ + G PN TY LI +
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 241 GDFERAFGVFEQM 253
GD ++ + E++
Sbjct: 576 GDATKSAKLIEEI 588
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +EM P ++ + R L L +M G+ N+ + ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ A +I++ G P+ VTFS LI+ G + +A EL +RM MG +P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T+ + L+ G + +A L+D VE G + VTY +L +C G+ A LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM + + V Y+ II G C+ G +D+A+++ N + KG K + + YT LI GF
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G ++ + M+ + F+ L
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L K+M G + T + +I C R + A +++ G + + ++L+ G C
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L G ++ AL+L D +VE G P +T + L++ G + A L +RM G QP
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+LK K A LL + E I V Y+I++ LC G + A NL ++M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG ++ Y +I G C G DD ++ ++K+ + P+ + ++ LID F K+G
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
A + ++M+ + +T L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSL 358
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L M + G P+ T+ +I + + + L L +M GV + + +L++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C LG + A +LF E+V V P+ V++ +L+D G EKA E++ +++ ++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ I ++ G + +++A+ L G+ V TYNI++ LC G + EA L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM G +P+ +YN +I H +G + ++ I + G +A T ++D
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD-MLSD 609
Query: 241 GDFERAF 247
G +++F
Sbjct: 610 GRLKKSF 616
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 1/262 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L M +G P++ TY+ +I R+G + AL EMV++G+ +++ SL+ GHC
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
GDI++A E++ + P VT++ L+ G + KA LY+ M GI P+++
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
LL G + ++ +A +L +E E + + VTYN+++ C G + +A L +M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG+ P SY +I G C G +A ++ + K + N + YT L+ GF ++G
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 244 ERAFGVFEQMMAANANLQITQF 265
E A V ++M+ +L + +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCY 650
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 3/241 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TYTS++G +G + +ALRL EM G+ +I T+L+ G G I A+KL
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F+E+ E V PN VT++V+I+ + G M KAFE M GI P + + L+ G
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 136 QNMLENAYRLLDEAVEHGIASV--VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
A +D + G + + Y LL C GK+ EA ++ +M+ +GV LV
Sbjct: 590 TGQASEAKVFVD-GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
Y +I G + + ++ + +GLKP+ + YT +ID K GDF+ AFG+++ M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 254 M 254
+
Sbjct: 709 I 709
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G S Y S+I + G++ A EM+N + ++ TSLM
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G IN AL+L+ E+ G+AP+ TF+ L+ + G + A +L+N M ++P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+++G+ ++ + A+ L E E GI +Y L+ LC G+ EA +
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D + + + Y ++ G CR+G +++A SV ++++G+ + + Y LIDG K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 241 GDFERAFGVFEQM 253
D + FG+ ++M
Sbjct: 661 KDRKLFFGLLKEM 673
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LLKEM G P + YTS+I + G+ EA + D M+N G N + T+++ G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG-SMEKAFELYNRMKLMGIQPTV 123
G +N A L ++ PN VT+ +D +K M+KA EL+N + L G+
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANT 787
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L++GF +Q +E A L+ + G++ +TY +++ LC V +A L +
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
M KG+ P V+YN +I G C G M A + N +L++GL PN T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 36/301 (11%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+++ EM L + PSE +S++ ++G + EAL L +V+ GV N+ V +L+
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI---- 119
C + A LFD + + G+ PN VT+S+LID + G ++ A M G+
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 120 -------------------------------QPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
+PTV L+ G+ + + A RL E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
GIA S+ T+ LLS L G + +A L ++M V P+ V+YN +I G+C +G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTP 267
M A+ + + +KG+ P+ +Y PLI G G A + + N L +T
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 268 L 268
L
Sbjct: 618 L 618
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++ M A G + Y +I ++ V EA+ +K ++ + +++ +L+
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + + L++ DE++ +P+ S L++ K G +E+A L R+ G+ P
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F+ L+ K A L D + G+ + VTY+IL+ C GK+ A + L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ G+ S+ YN +I GHC+ G + A M ++ K L+P +TYT L+ G+ K
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G +A ++ +M I FT L
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTL 513
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M ++G P YT VI + ++ A + M +G VNI+ L+
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C + A+ + ++ + P+ VT+ L+ K+ E E+ + M +
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P+ V L++G +K+ +E A L+ V+ G++ ++ YN L+ LC K EA L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D+M G+ P+ V+Y+ +I CR+G +D A S + ++ GLK + Y LI+G K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
GD A G +M+ + +T L
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + LKEM G +P +Y +I G EA D + +N I T L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + AL + E+V+ GV + V + VLID S K + F L M G++P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
I ++ K + A+ + D + G + + VTY +++ LC G V EA L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 181 DKMMS-----------------------------------KGVTPSLVSYNHIILGHCRK 205
KM KG+ + +YN +I G CR+
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G +++A ++ R++ G+ P+ +TYT +I+ ++ D ++A ++ M
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
I + + P T S L+ K A EL+N M +GI+P V+I +++ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
L A ++ G ++V YN+L+ LC KV EA + + K + P +V+Y
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA---------FG 248
++ G C+ + +M+ +L P+ + L++G K+G E A FG
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 249 VFEQMMAANA 258
V + NA
Sbjct: 363 VSPNLFVYNA 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L+ M G P TYT++I R+ +V +A+ L + M G+ + + +L+
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI--DCSSK 100
G C+ G++ A +L +E++ G+ PN T D SSK
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSK 906
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 130/227 (57%), Gaps = 1/227 (0%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG 102
E++++G P+N+ V LM C G+I+ A K+FDEI + + P V+F+ LI+ K+G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYN 161
++++ F L ++M+ +P VF L+ K+N ++ A+ L DE + G I + V +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
L+ G++ KM+SKG+ P +V YN ++ G C+ G + A ++++ ++++
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
GL+P+ +TYT LIDGF + GD E A + ++M L F+ L
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ E+ P+ ++ ++I + GN+ E RLK +M S ++ ++L+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ A LFDE+ + G+ PN V F+ LI S+ G ++ E Y +M G+QP
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ + L+ GF K L A ++D + G+ +TY L+ C G V A +
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M G+ V ++ ++ G C++G + DA + +L+ G+KP+ +TYT ++D F KK
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498
Query: 241 GDFERAFGVFEQMMA 255
GD + F + ++M +
Sbjct: 499 GDAQTGFKLLKEMQS 513
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G IP++ +T++I R G + +M++ G+ +I++ +L+
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD+ +A + D ++ G+ P+ +T++ LID + G +E A E+ M GI+
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ G K+ + +A R L E + GI VTY +++ C G LL
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M S G PS+V+YN ++ G C+ G M +A +++ +L G+ P+ +TY L++G +
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Query: 241 GDFERAF 247
+ + +
Sbjct: 569 ANSSKRY 575
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P + TYT++I R G+V AL ++ EM +G+ ++ + ++L+ G C G + A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ E++ AG+ P+ VT+++++D K G + F+L M+ G P+V LL G
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 133 FQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
K ++NA LLD + G + +TYN LL G + + + G+
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE---GHHRHANSSKRYIQKPEIGIVAD 586
Query: 192 LVSYNHII 199
L SY I+
Sbjct: 587 LASYKSIV 594
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ KEM G +++++ ++G V++A R EM+ +G+ + + T +M
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C GD + KL E+ G P+ VT++VL++ K+G M+ A L + M +G+ P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWL 167
LL+G + N+ + + E GI A + +Y +++ L
Sbjct: 554 DDITYNTLLEGHHRH---ANSSKRYIQKPEIGIVADLASYKSIVNEL 597
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 3/267 (1%)
Query: 1 MACKLLKEMRALGWIPSEGT-YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+A LLK+M G I ++ YT++I NV +AL L EM N G+ N++ SL
Sbjct: 238 LALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
++ C G + A +L +++E + PN VTFS LID K G + +A +LY+ M I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACN 178
P +F L+ GF + L+ A + + + +VVTYN L+ C +V E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L +M +G+ + V+YN +I G + G D A + +++ G+ P+ +TY+ L+DG
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 239 KKGDFERAFGVFEQMMAANANLQITQF 265
K G E+A VFE + + I +
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTY 503
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T++++I V++G +VEA +L DEM+ + +I +SL+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A +F+ ++ PN VT++ LI K +E+ EL+ M G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++G + + A ++ + V G+ ++TY+ILL LC GK+ +A +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P + +YN +I G C+ G ++D + + + KG+KPN + YT +I GF +K
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 241 GDFERAFGVFEQM 253
G E A +F +M
Sbjct: 549 GLKEEADALFREM 561
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 138/268 (51%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M A G P TY +V+ ++G++ AL L +M + ++++ T+++
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++N AL LF E+ G+ PN VT++ LI C G A L + M I P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L DE ++ I + TY+ L++ C ++ EA ++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P++V+YN +I G C+ +++ + + ++GL N +TY LI G F+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
GD + A +F++M++ I ++ L
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+Y +I R+ + AL + +M+ G +I+ +SL+ G+C I+ A+ L D++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
PN VTF+ LI +A L +RM G QP +F ++ G K+ +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+ A LL + + I A VV Y ++ LC V +A NL +M +KG+ P++V+YN +
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
I C G DA +++ ++++ + PN +T++ LID F K+G A ++++M+ +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 259 NLQITQFTPL 268
+ I ++ L
Sbjct: 357 DPDIFTYSSL 366
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M LG+ P T +S++ + EA+ L D+M N + +L+
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D +V G P+ T+ +++ K G ++ A L +M+ I+
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ + +A L E GI +VVTYN L+ LC G+ +A L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ + + P++V+++ +I ++G + +A + + ++K+ + P+ TY+ LI+GF
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +FE M++ + + + L
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L +EM G + + TY ++I + G+ A ++ +MV+ GVP +II + L+ G
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + AL +F+ + ++ + P+ T++++I+ K G +E ++L+ + L G++P V
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
I ++ GF ++ + E A L E E G + + TYN L+ G + L+ +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 183 MMSKG 187
M S G
Sbjct: 596 MRSCG 600
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 139 LENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
L++A L E V+ + S+V +N LLS + + K +L ++M + ++ L SYN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I CR+ + A +V+ +++K G +P+ +T + L++G+ A + +QM
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 258 ANLQITQFTPL 268
F L
Sbjct: 181 YQPNTVTFNTL 191
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA K+ K+M + G P TY+ ++ + G + +AL + + + S + +I ++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G + LF + GV PN + ++ +I + G E+A L+ MK G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 121 P 121
P
Sbjct: 568 P 568
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L +M P+ TY ++I T ++ V EA L + + G+ ++ SL++
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G CL + A++LF+E+ G P+ T+++LID G +++A + +M+L G
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+V L+ GF K N A + DE HG++ + VTYN L+ LC +V +A L+
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M+ +G P +YN ++ CR G + A ++ + G +P+ +TY LI G K
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G E A + + NL + P+
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPV 616
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 2/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+L++M + G +P E T+T+V+ + +G++ ALR++++MV G + + ++ G C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 65 LLGDINSALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G + AL E+ + G P+ TF+ L++ K G ++ A E+ + M G P V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
+ ++ G K ++ A +LD+ + + + VTYN L+S LC +V EA L
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ SKG+ P + ++N +I G C A + + KG +P+ TY LID KG
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 243 FERAFGVFEQM 253
+ A + +QM
Sbjct: 451 LDEALNMLKQM 461
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ P + T+ +++ + G+V A+ + D M+ G ++ S++ G C LG++ A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+++ D+++ +PN VT++ LI K +E+A EL + GI P V L++G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
A L +E G TYN+L+ LC GK+ EA N+L +M G S
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+++YN +I G C+ +A + + + G+ N++TY LIDG K E A + +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 252 QMM 254
QM+
Sbjct: 530 QMI 532
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 34/257 (13%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +EMR+ G P E TY +I + +G + EAL + +M SG ++I +L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C A ++FDE+ GV+ N+VT++ LID K +E A +L ++M + G +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
P + TYN LL+ C G + +A +++
Sbjct: 538 PDKY----------------------------------TYNSLLTHFCRGGDIKKAADIV 563
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S G P +V+Y +I G C+ G ++ A ++ I KG+ Y P+I G F+K
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 241 GDFERAFGVFEQMMAAN 257
A +F +M+ N
Sbjct: 624 RKTTEAINLFREMLEQN 640
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 131/250 (52%), Gaps = 2/250 (0%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+M G P T+ +I R + A+ + ++M + G+ + T++M+G+ G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM-GIQPTVFIV 126
D++ AL++ +++VE G + + V+ +V++ K G +E A M G P +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L+ G K +++A ++D ++ G V TYN ++S LC LG+V EA +LD+M++
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+ +P+ V+YN +I C++ +++A + + KG+ P+ T+ LI G +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 246 AFGVFEQMMA 255
A +FE+M +
Sbjct: 419 AMELFEEMRS 428
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 9/211 (4%)
Query: 65 LLGDINSALKLFDEIVEA-----GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
LL D NS LKL EI A G+ P+ TF+VLI + + A + M G+
Sbjct: 163 LLVDGNS-LKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGL 220
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACN 178
P +++G+ ++ L+ A R+ ++ VE G + S V+ N+++ C G+V +A N
Sbjct: 221 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Query: 179 LLDKMMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ +M ++ G P ++N ++ G C+ G + A +M+ +L++G P+ TY +I G
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
K G+ + A V +QM+ + + + L
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFI 125
G + K+ +++ + TF +LI+ ++ ++ + + M G++P
Sbjct: 97 GSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHF 156
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-------VTYNILLSWLCGLGKVVEACN 178
+L N+L + L + H SV T+N+L+ LC ++ A
Sbjct: 157 YNRML------NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+L+ M S G+ P ++ ++ G+ +G +D A + ++++ G + ++ ++ GF
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 239 KKGDFERAFGVFEQM 253
K+G E A ++M
Sbjct: 271 KEGRVEDALNFIQEM 285
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 137/253 (54%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L MR+ + P TY +IG+ +G + AL++ +++++ +I T L++
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
L G ++ ALKL DE++ G+ P+ T++ +I K G +++AFE+ ++L G +P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAV-EHGIASVVTYNILLSWLCGLGKVVEACNLL 180
V LL+ Q E +L+ + E +VVTY+IL++ LC GK+ EA NLL
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M KG+TP SY+ +I CR+G +D A + ++ G P+ + Y ++ K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 241 GDFERAFGVFEQM 253
G ++A +F ++
Sbjct: 417 GKADQALEIFGKL 429
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++++ + G P Y ++I + + +A R+ D M + + + ++
Sbjct: 143 AVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G ++ ALK+ ++++ P +T+++LI+ + G +++A +L + M G++P
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+F +++G K+ M++ A+ ++ G V++YNILL L GK E L+
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM S+ P++V+Y+ +I CR G +++A +++ + +KGL P+A +Y PLI F ++
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 241 GDFERAFGVFEQMMA 255
G + A E M++
Sbjct: 382 GRLDVAIEFLETMIS 396
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 30 RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAV 89
R GN +E+L L + MV G ++I+ T L+KG L +I A+++ EI+E P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
++ LI+ K+ ++ A + +RM+ P ++ + L+ A ++L++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 150 VEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
+ +V+TY IL+ G V EA L+D+M+S+G+ P + +YN II G C++G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
D A+ ++ + KG +P+ ++Y L+ +G +E + +M + + + ++ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A K+L ++ + P+ TYT +I + +G V EAL+L DEM++ G+ ++ +++
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G ++ A ++ + G P+ +++++L+ G E+ +L +M
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V L+ + +E A LL E G+ +Y+ L++ C G++ A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L+ M+S G P +V+YN ++ C+ G D A + ++ + G PN+ +Y + +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 240 KGDFERAFGVFEQMMA 255
GD RA + +MM+
Sbjct: 451 SGDKIRALHMILEMMS 466
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 1/234 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL+ +M + P+ TY+ +I T R G + EA+ L M G+ + L+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G ++ A++ + ++ G P+ V ++ ++ K G ++A E++ ++ +G P
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
+ A ++ E + +GI +TYN ++S LC G V EA LL
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
M S PS+V+YN ++LG C+ ++DA +V+ ++ G +PN TYT LI+G
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%)
Query: 98 SSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV 157
S + G+ ++ L M G P V + L+KGF + A R+++ + G V
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV 158
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNR 217
YN L++ C + ++ +A +LD+M SK +P V+YN +I C +G +D A V+N+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 218 ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+L +P +TYT LI+ +G + A + ++M++
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LLK M+ G P +Y +I R+G + A+ + M++ G +I+ +++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G + AL++F ++ E G +PN+ +++ + G +A + M GI P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLL-DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
++ ++ M++ A+ LL D SVVTYNI+L C ++ +A N+L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
+ M+ G P+ +Y +I G G +A + N +++
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + L+ M + G +P Y +V+ T + G +AL + ++ G N ++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GD AL + E++ G+ P+ +T++ +I C + G +++AFEL M+
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P+V +L GF K + +E+A +L+ V +G + TY +L+ + G EA L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Query: 180 LDKMM 184
+ ++
Sbjct: 566 ANDLV 570
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
++K + + N +E+ + LL+ V G V+ L+ L + +A +++ +
Sbjct: 92 MLKIFHRSCRSGNYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-I 149
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ K P + +YN +I G C+ +DDA V++R+ K P+ +TY +I +G
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
+ A V Q+++ N + +T L
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTIL 234
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T++++I V++G +VEA +L DEM+ + +I +SL+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A +F+ ++ PN VT++ LI K +++ EL+ M G+
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ GF + +NA + + V G+ ++TY+ILL LC GKV A +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P + +YN +I G C+ G ++D + + + KG+KPN +TYT ++ GF +K
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 241 GDFERAFGVFEQM 253
G E A +F +M
Sbjct: 550 GLKEEADALFREM 562
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LLK+M P Y ++I NV +AL L EM N G+ N++ SL+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ C G + A +L +++E + PN VTFS LID K G + +A +LY+ M I
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P +F L+ GF + L+ A + + + +VVTYN L+ C +V E L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ + V+Y +I G + D+A V +++ G+ P+ +TY+ L+DG
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
G E A VFE + + I +
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYN 505
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G P TY V+ ++G++ AL L +M + +++ +++
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++N AL LF E+ G+ PN VT++ LI C G A L + M I P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L DE ++ I + TY+ L++ C ++ EA ++
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P++V+YN +I G C+ +D+ + + ++GL N +TYT LI GFF+
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 241 GDFERAFGVFEQMMA 255
+ + A VF+QM++
Sbjct: 445 RECDNAQIVFKQMVS 459
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 139/263 (52%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG + TY+ +I R+ + AL + +M+ G +I+ SL+ G C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L ++VE G P++ TF+ LI + +A L +RM + G QP +
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ ++ A LL + + I VV YN ++ LC V +A NL +M +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P++V+YN +I C G DA +++ ++++ + PN +T++ LID F K+G
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A ++++M+ + + I ++ L
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSL 367
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M LG+ P T S++ + +A+ L +MV G + +L+
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G + A+ L D +V G P+ VT+ ++++ K G ++ A L +M+ I+
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V I ++ + +A L E GI +VVTYN L+ LC G+ +A L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ + + P++V+++ +I ++G + +A + + ++K+ + P+ TY+ LI+GF
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +FE M++ + + + L
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A+ L +MV S +I+ + L+ + + + L +++ G++ N T+S+LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI- 154
+C + + A + +M +G +P + + LL GF N + +A L+ + VE G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
T+N L+ L + EA L+D+M+ KG P LV+Y ++ G C++G +D A S+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ ++ + ++P + Y +ID + A +F +M
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K +MR +G +P+E TYTS+I + GN+ +A RL +EM+ GV N++ T+L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + A +LF ++ AGV PN +++ LI K +M++A EL N +K GI+P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ + + G +E A +++E E GI A+ + Y L+ G E +LL
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFK 239
D+M + ++V++ +I G C+ + A NRI GL+ NA +T +IDG K
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
E A +FEQM+ T +T L
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 36/300 (12%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +EM+ G +P TY S+I + G + + + +EM + ++I +L+ C
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + L+ + E+ G+ PN V++S L+D K G M++A + Y M+ +G+ P +
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ K L +A+RL +E ++ G+ +VVTY L+ LC ++ EA L KM
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP------------------ 225
+ GV P+L SYN +I G + MD A ++N + +G+KP
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 226 -----------------NALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
N+L YT L+D +FK G+ + ++M + + + F L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 1/255 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P G + ++ + G + EA++ +M V L+ LG + +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
F +++ AG P T++++IDC K G +E A L+ MK G+ P ++ GF
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K L++ +E + V+TYN L++ C GK+ +M G+ P++V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
SY+ ++ C++G M A + + GL PN TYT LID K G+ AF + +M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 254 MAANANLQITQFTPL 268
+ + +T L
Sbjct: 429 LQVGVEWNVVTYTAL 443
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M+ P + ++ + G + R +M+ +G + ++
Sbjct: 211 AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID 270
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C GD+ +A LF+E+ G+ P+ VT++ +ID K+G ++ + MK M +P
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K L E +G+ +VV+Y+ L+ C G + +A
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M G+ P+ +Y +I +C+ G + DA+ + N +L+ G++ N +TYT LIDG
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +F +M A + + L
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNAL 478
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
++ EM+ G + YT+++ + GN E L L DEM + V ++ L+ G C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 65 LLGDINSALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
++ A+ F+ I + G+ NA F+ +ID K +E A L+ +M G+ P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 124 FIVKFLLKG-FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
L+ G F++ N+LE A L D+ E G+ ++ Y L+ L ++ +A + L+
Sbjct: 649 TAYTSLMDGNFKQGNVLE-ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
+M+ +G+ P V ++ H GC+D+A + + ++K L
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++M G +P YTS++ +QGNV+EAL L+D+M G+ ++++ TSL+
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL 110
G + A +E++ G+ P+ V ++ ++G +++A EL
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M LG+ P T S++ R+ V +A+ L D+MV G +I+ +++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C +N A F EI G+ PN VT++ L++ A L + M I
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V LL F K + A L +E V I +VTY+ L++ LC ++ EA +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D M+SKG +VSYN +I G C+ ++D + + ++GL N +TY LI GFF+
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 240 KGDFERAFGVFEQM 253
GD ++A F QM
Sbjct: 378 AGDVDKAQEFFSQM 391
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M +G+ P Y ++I + + V +A E+ G+ N++ T+L+
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + A +L ++++ + PN +T+S L+D K G + +A EL+ M M I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G + ++ A ++ D V G +A VV+YN L++ C +V + L
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +G+ + V+YN +I G + G +D A +++ G+ P+ TY L+ G
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G+ E+A +FE M +L I +T +
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTV 441
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ TY++++ V+ G V+EA L +EMV + +I+ +SL+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G CL I+ A ++FD +V G + V+++ LI+ K +E +L+ M G+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++GF + ++ A + GI+ + TYNILL LC G++ +A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M + + +V+Y +I G C+ G +++A+S+ + KGLKP+ +TYT ++ G K
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 241 GDFERAFGVFEQM 253
G ++ +M
Sbjct: 484 GLLHEVEALYTKM 496
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +EM + P TY+S+I + EA ++ D MV+ G +++ +L+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + +KLF E+ + G+ N VT++ LI + G ++KA E +++M GI P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
++ LL G LE A + ++ + + +VTY ++ +C GKV EA +L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
+ KG+ P +V+Y ++ G C KG + + ++ ++ ++GL N T +
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KE+ G P+ TYT+++ +A RL +M+ + N+I ++L+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + A +LF+E+V + P+ VT+S LI+ +++A ++++ M G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLL 180
V L+ GF K +E+ +L E + G+ S VTYN L+ G V +A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M G++P + +YN ++ G C G ++ A + + K+ + + +TYT +I G K
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G E A+ +F + I +T +
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 27 TCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAP 86
T +R + +A+ L +MV S +I+ L+ L + + L ++ G+
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+ TF+++I+C + A + +M +G +P + L+ GF ++N + +A L+
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 147 DEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
D+ VE G +V YN ++ LC +V +A + ++ KG+ P++V+Y ++ G C
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
DA +++ ++KK + PN +TY+ L+D F K G A +FE+M+ + + I +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 266 TPL 268
+ L
Sbjct: 299 SSL 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K+M LG T+ VI V AL + +M+ G + + SL+ G C
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
++ A+ L D++VE G P+ V ++ +ID K + AF+ + ++ GI+P
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP----- 223
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
+VVTY L++ LC + +A LL M+ K
Sbjct: 224 -----------------------------NVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
+TP++++Y+ ++ + G + +A + +++ + P+ +TY+ LI+G + A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 247 FGVFEQMMAANANLQITQFTPL 268
+F+ M++ + + L
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTL 336
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 143/265 (53%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+LK M+ G + ++ TYT ++ V+ G + +A +L DEM G+ ++ V TSL+ +C
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G++ A LFDE+ E G++P++ T+ LID K+G M A L N M+ G+ T
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ G+ ++ M++ A + D + G A V T N + S L + EA L +M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
M GV S VSY ++I +C++G +++A + + KG++PNA+TY +I + K+G
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
+ A + M A + +T L
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSL 545
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL EMR G YTS+I R+GN+ A L DE+ G+ + +L+
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G++ +A L +E+ GV V F+ LID + G +++A +Y+ M+ G Q
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
VF + F + + A + L +E G+ S V+Y L+ C G V EA L
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M SKGV P+ ++YN +I +C++G + +A + + G+ P++ TYT LI G
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 241 GDFERAFGVFEQM 253
+ + A +F +M
Sbjct: 553 DNVDEAMRLFSEM 565
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
V G E LR+ D MV G+ ++ + I+ L++F +V++GV
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
+ +++++ + G +EK+ +L + GI+P + ++ + KQ +L
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ G+ + VTY +L+ GK+ +A L D+M +G+ + Y +I +CRKG
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTP 267
M A+ + + + +KGL P++ TY LIDG K G+ A + +M + N+ F
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 268 L 268
L
Sbjct: 405 L 405
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 36/266 (13%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L E+ G PS TY ++I + G + A L +EM + GV + +V +L+ G+C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 65 LLGDINSA----------------------------LKLFDE-------IVEAGVAPNAV 89
G ++ A LK +DE ++E GV + V
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
+++ LID K G++E+A L+ M G+QP ++ + KQ ++ A +L
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 150 VEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
+G+ TY L+ C V EA L +M KG+ + V+Y +I G + G
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLI 234
D+A+ + + + +KG + YT LI
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM + G P+ TY +I +QG + EA +L+ M +G+ + TSL+
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
G C+ +++ A++LF E+ G+ N+VT++V+I SK G ++AF LY+ MK G
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A KL M A G P TYTS+I G C+ NV EA+RL EM G+ N + T ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECI-ADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
G G + A L+DE+ G + ++ LI
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 131/231 (56%), Gaps = 1/231 (0%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG 83
+I C G + ++ L E+ G N+++ T+L+ G C G+I A LF E+ + G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
+ N T++VLI+ K G ++ FE+Y +M+ G+ P ++ ++ K ++A+
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 144 RLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
++ DE E G++ ++VTYN L+ LC K+ EA ++D+M S G+ P+L++YN +I G
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
C G + A S+ + +GL P+ +TY L+ GF +KGD A + ++M
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ ++M+ G P+ TY V+ + G +A ++ DEM GV NI+ +L+ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C +N A K+ D++ G+ PN +T++ LID +G + KA L +K G+ P++
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ GF ++ A +++ E E GI S VTY IL+ + +A L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M G+ P + +Y+ +I G C KG M++A + +++K +PN + Y +I G+ K+G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 243 FERAFGVFEQM 253
RA + ++M
Sbjct: 494 SYRALKLLKEM 504
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 135/256 (52%), Gaps = 1/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ EMR G + TY ++IG R+ + EA ++ D+M + G+ N+I +L+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G + AL L ++ G++P+ VT+++L+ + G A ++ M+ GI+P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ F + + +E A +L E G + V TY++L+ C G++ EA L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+ K P+ V YN +ILG+C++G A ++ + +K L PN +Y +I+ K+
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 241 GDFERAFGVFEQMMAA 256
+ A + E+M+ +
Sbjct: 527 RKSKEAERLVEKMIDS 542
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM LG + +E TYT +I + G + + ++M GV N+ +M
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G A ++FDE+ E GV+ N VT++ LI + + +A ++ ++MK GI P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ GF L A L + G++ S+VTYNIL+S C G A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +G+ PS V+Y +I R M+ A + + + GL P+ TY+ LI GF K
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 241 GDFERAFGVFEQMMAAN 257
G A +F+ M+ N
Sbjct: 457 GQMNEASRLFKSMVEKN 473
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
++ EM G++P + ++ V + + +E S V +++ L+
Sbjct: 112 LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILI 170
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
KG C G+I + L E+ E G +PN V ++ LID K G +EKA +L+ M +G+
Sbjct: 171 KGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLV 230
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
L+ G K + + + + ++ E G+ ++ TYN +++ LC G+ +A +
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D+M +GV+ ++V+YN +I G CR+ +++A V++++ G+ PN +TY LIDGF
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 240 KGDFERAFGV 249
G +A +
Sbjct: 351 VGKLGKALSL 360
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%), Gaps = 1/227 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K++ +M++ G P+ TY ++I G + +AL L ++ + G+ +++ L+
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD + A K+ E+ E G+ P+ VT+++LID ++ +MEKA +L M+ +G+ P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V L+ GF + + A RL VE + V YN ++ C G A LL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
+M K + P++ SY ++I C++ +A ++ +++ G+ P+
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
+ V+I+ + S+ + +N M G P +LL + + +E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 151 EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
+ V ++ IL+ C G++ ++ +LL ++ G +P++V Y +I G C+KG ++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
A + + K GL N TYT LI+G FK G ++ F ++E+M
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A +L M LG +P TY+ +I G C++ G + EA RL MV N ++ +++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIK-GQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+C G ALKL E+ E +APN ++ +I+ K ++A L +M GI
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 121 PTVFIVKFLLKG 132
P+ I+ + +
Sbjct: 546 PSTSILSLISRA 557
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 1/258 (0%)
Query: 12 LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
LG+ P + +++ + V EAL L D MV G +I +L+ G CL G ++
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A+ L D +VE G PN VT+ +++ K G A EL +M+ I+ ++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 132 GFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
G K L+NA+ L +E G A ++TYN L+ C G+ + LL M+ + ++P
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
++V+++ +I ++G + +A ++ ++++G+ PN +TY LIDGF K+ E A +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 251 EQMMAANANLQITQFTPL 268
+ M++ + I F L
Sbjct: 392 DLMISKGCDPDIMTFNIL 409
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 137/263 (52%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL++M Y+ +I + G++ A L +EM G +II +L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G + KL ++++ ++PN VTFSVLID K G + +A +L M GI
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF K+N LE A +++D + G ++T+NIL++ C ++ + L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +GV + V+YN ++ G C+ G ++ A + ++ + ++P+ ++Y L+DG
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
G+ E+A +F ++ + L I
Sbjct: 486 NGELEKALEIFGKIEKSKMELDI 508
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL++M P+ T++ +I + V++G + EA +L EM+ G+ N I SL+ G
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C + A+++ D ++ G P+ +TF++LI+ K ++ EL+ M L G+
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L++GF + LE A +L E V + +V+Y ILL LC G++ +A + K
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ + + Y II G C +DDA+ + + KG+K +A Y +I +K
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 243 FERAFGVFEQM 253
+A +F +M
Sbjct: 559 LSKADILFRKM 569
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LLKEM G P+ TY S+I ++ + EA+++ D M++ G +I+ L+
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C I+ L+LF E+ GV N VT++ L+ + G +E A +L+ M ++P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ K LL G LE A + + + + + Y I++ +C KV +A +L
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ KGV +YN +I CRK + A + ++ ++G P+ LTY LI
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 241 GDFERAFGVFEQMMAA 256
D A + E+M ++
Sbjct: 592 DDATTAAELIEEMKSS 607
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L K+M + G S T + +I R + A +++ G + ++ +L+ G C
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L ++ AL+L D +VE G P +T + L++ G + A L +RM G QP
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+L K A LL + E I V Y+I++ LC G + A NL ++M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG +++YN +I G C G DD ++ ++K+ + PN +T++ LID F K+G
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 244 ERAFGVFEQMM 254
A + ++MM
Sbjct: 350 READQLLKEMM 360
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++M +P+ + + + L L +M + G+ +I + ++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ A +I++ G P+ V F+ L++ + +A EL +RM MG +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T+ + L+ G + +A L+D VE G + VTY +L+ +C G+ A LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM + + V Y+ II G C+ G +D+A+++ N + KG K + +TY LI GF
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G ++ + M+ + + F+ L
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 105 EKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNIL 163
+ A +L+ M PTV L K E L + GIA S+ T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 164 LSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
++ C K+ A + + K+M G P V +N ++ G C + + +A +++R+++ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
KP +T L++G G A + ++M+ + P+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL++M TY+++I + R G + A+ L EM G+ +++ SL+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G N L ++V + PN +TF+VL+D K G +++A ELY M GI
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + L+ G+ QN L A +LD V + + +VT+ L+ C + +V + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ +G+ + V+Y+ ++ G C+ G + A + ++ G+ P+ +TY L+DG
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G E+A +FE + + +L I +T +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LLK+M + +P+ T+ ++ V++G + EA L EM+ G+ NII +LM G+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ ++ A + D +V +P+ VTF+ LI + ++ +++ + G+
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L++GF + ++ A L E V HG+ V+TY ILL LC GK+ +A + + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ +V Y II G C+ G ++DA+++ + KG+KPN +TYT +I G KKG
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 244 ERAFGVFEQM 253
A + +M
Sbjct: 525 SEANILLRKM 534
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 36/290 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L ++ LG+ P T+ ++I +G V EA+ L D MV +G +++ S++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ- 120
G C GD + AL L ++ E V + T+S +ID + G ++ A L+ M+ GI+
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 121 ----------------------------------PTVFIVKFLLKGFQKQNMLENAYRLL 146
P V LL F K+ L+ A L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 147 DEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
E + GI+ +++TYN L+ C ++ EA N+LD M+ +P +V++ +I G+C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+DD V I K+GL NA+TY+ L+ GF + G + A +F++M++
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 133/253 (52%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L KEM G P+ TY +++ Q + EA + D MV + +I+ TSL+K
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C++ ++ +K+F I + G+ NAVT+S+L+ + G ++ A EL+ M G+ P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V LL G LE A + ++ + + +V Y ++ +C GKV +A NL
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ KGV P++++Y +I G C+KG + +A ++ ++ + G PN TY LI +
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 241 GDFERAFGVFEQM 253
GD + + E+M
Sbjct: 557 GDLTASAKLIEEM 569
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +EM +PS ++ R L ++ +G+ NI ++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C A + ++++ G P+ TF+ LI G + +A L +RM G QP
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ G + A LL + E + A V TY+ ++ LC G + A +L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +KG+ S+V+YN ++ G C+ G +D ++ ++ + + PN +T+ L+D F K+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G + A ++++M+ + I + L
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTL 339
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A+ L EM+ S +++ + N L ++ G+A N T +++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
+C + A+ + ++ +G +P L+KG + + A L+D VE+G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 156 -SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
VVTYN +++ +C G A +LL KM + V + +Y+ II CR GC+D A S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ KG+K + +TY L+ G K G + + + M++ + F L
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
+ A+ LF E++ + P+ V FS ++ + +++L GI ++ + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 130 LKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ F + AY +L + ++ G T+N L+ L GKV EA L+D+M+ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
P +V+YN I+ G CR G A ++ ++ ++ +K + TY+ +ID + G + A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 249 VFEQMMAANANLQITQFTPL 268
+F++M + + L
Sbjct: 250 LFKEMETKGIKSSVVTYNSL 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +EM + G +P TY ++ G + +AL + +++ S + + I++ T+++
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G + A LF + GV PN +T++V+I K GS+ +A L +M+ G
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS 156
P L++ + L + +L++E G ++
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T++++I V++G +VEA +L DEM+ + +I +SL+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A +F+ ++ PN VT+S LI K +E+ EL+ M G+
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ GF + +NA + + V G+ +++TYNILL LC GK+ +A +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P + +YN +I G C+ G ++D + + + KG+ PN + Y +I GF +K
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 241 GDFERAFGVFEQM 253
G E A + ++M
Sbjct: 552 GSKEEADSLLKKM 564
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M G P TY +V+ ++G++ AL L +M + ++++ +++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ AL LF E+ G+ P+ T+S LI C G A L + M I P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L DE ++ I + TY+ L++ C ++ EA ++
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P++V+Y+ +I G C+ +++ + + ++GL N +TYT LI GFF+
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
D + A VF+QM++ + I + L
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M +G+ P T+T++I EA+ L D+MV G +++ +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GDI+ AL L ++ + + + V ++ +ID K M+ A L+ M GI+P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ +A RLL + +E I +VVT++ L+ GK+VEA L
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M+ + + P + +Y+ +I G C +D+A + ++ K PN +TY+ LI GF K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 241 GDFERAFGVFEQM 253
E +F +M
Sbjct: 412 KRVEEGMELFREM 424
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG TY+ I R+ + AL + +M+ G +I+ +SL+ G+C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ TF+ LI +A L ++M G QP +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ ++ A LL + + I A VV YN ++ LC + +A NL +M +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P + +Y+ +I C G DA +++ ++++ + PN +T++ LID F K+G
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A ++++M+ + + I ++ L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSL 369
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 2/234 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
P+ TY+++I + V E + L EM G+ N + T+L+ G D ++A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+F ++V GV PN +T+++L+D K G + KA ++ ++ ++P ++ +++G
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 135 KQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K +E+ + L G++ +V+ YN ++S C G EA +LL KM G P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+YN +I R G + + ++ + G +A T L+ G +++F
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
V +A+ L +MV S +I+ L+ + + L +++ G++ + T+S+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
I+C + + A + +M +G +P + + LL G+ + +A L+D+ VE G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 154 I-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
T+ L+ L K EA L+D+M+ +G P LV+Y ++ G C++G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
S++ ++ K ++ + + Y +IDG K + A +F +M
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ K+M ++G P+ TY ++ + G + +A+ + + + S + +I +++G C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + +LF + GV+PN + ++ +I + GS E+A L +MK G P
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
L++ + E + L+ E G A
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
S+V +N LLS + + K +L ++M + G++ L +Y+ I CR+ + A +V+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+++K G +P+ +T + L++G+ A + +QM+ FT L
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 143/269 (53%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M +G+ P T+T+++ + EA+ L + MV G +++ +++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+ + AL L +++ + + + V ++ +ID K M+ AF+L+N+M+ GI+P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ +A RLL + +E I +V +N L+ GK+VEA L
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 181 DKMM-SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D+M+ SK P +V+YN +I G C+ +++ V + ++GL N +TYT LI GFF+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
D + A VF+QM++ + I + L
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L++ M G P TY +VI ++G AL L ++M + ++++ +++
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ A LF+++ G+ P+ T++ LI C G A L + M I P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVE--HGIASVVTYNILLSWLCGLGKVVEACNL 179
+ L+ F K+ L A +L DE V+ H VV YN L+ C +V E +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ + V+Y +I G + D+A V +++ G+ P+ +TY L+DG
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G+ E A VFE M + L I +T +
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 1/251 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG + TY+ I R+ + AL + +M+ G +I+ SL+ G C
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ VTF+ L+ + +A L RM + G QP +
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ + A LL++ + I A VV YN ++ LC + +A +L +KM +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P + +YN +I C G DA +++ +L+K + P+ + + LID F K+G
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 246 AFGVFEQMMAA 256
A ++++M+ +
Sbjct: 339 AEKLYDEMVKS 349
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M G P TY +I G +A RL +M+ + +++ +L+
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 62 GHCLLGDINSALKLFDEIVEAG-VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G + A KL+DE+V++ P+ V ++ LI K +E+ E++ M G+
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
L+ GF + +NA + + V G+ ++TYNILL LC G V A +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ M + + +V+Y +I C+ G ++D + + + KG+KPN +TYT ++ GF +
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 240 KGDFERAFGVFEQM 253
KG E A +F +M
Sbjct: 509 KGLKEEADALFVEM 522
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 4/244 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG--VPVNIIVATSL 59
A +LL +M P + ++I V++G +VEA +L DEMV S P +++ +L
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTL 362
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+KG C + +++F E+ + G+ N VT++ LI + + A ++ +M G+
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACN 178
P + LL G +E A + + + + +VTY ++ LC GKV + +
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L + KGV P++V+Y ++ G CRKG ++A ++ + + G PN+ TY LI
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 239 KKGD 242
+ GD
Sbjct: 543 RDGD 546
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 34 VVEALRLKD------EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
V++ L+L D +MV S +I+ + L+ + + + L +++ G++ N
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
T+S+ I+ + + A + +M +G P++ + LL GF N + A L+D
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 148 EAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
+ VE G VT+ L+ L K EA L+++M+ KG P LV+Y +I G C++G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
D A +++N++ K ++ + + Y +IDG K + AF +F +M + +
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 267 PL 268
PL
Sbjct: 290 PL 291
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 2 ACKLLKEM-RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A KL EM ++ P Y ++I + V E + + EM G+ N + T+L+
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G D ++A +F ++V GV P+ +T+++L+D G++E A ++ M+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
+ +++ K +E+ + L G+ +VVTY ++S C G EA L
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M G P+ +YN +I R G + ++ + G +A T+ L+
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLH 577
Query: 240 KGDFERAF 247
G +++F
Sbjct: 578 DGRLDKSF 585
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 131/241 (54%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL++M P+ +T++I T V++GN++EA L EM+ V N+ SL+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ G + A +FD +V G P+ VT++ LI K +E +L+ M G+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
F L+ G+ + L A ++ + V+ G++ +VTYNILL LC GK+ +A ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + +++YN II G CR + +A+ + + +KG+KP+A+ Y +I G +K
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 241 G 241
G
Sbjct: 478 G 478
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G++P+ Y +VI + ++ AL + M G+ + + +L+
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G A +L ++V+ + PN + F+ LID K G++ +A LY M + P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ GF L +A + D V G VVTYN L++ C +V + L
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +G+ +YN +I G+C+ G ++ A V NR++ G+ P+ +TY L+D
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 241 GDFERAFGVFEQMMAANANLQITQF 265
G E+A + E + + ++ I +
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITY 432
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 8 EMRALGWIPSEGTYTSVI-GTCVRQGN-VVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
+M LG+ PS T S++ G C QGN EA+ L D M G N+++ +++ G C
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFC--QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
D+N+AL++F + + G+ +AVT++ LI S G A L M I P V
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ F K+ L A L E + + +V TYN L++ C G + +A + D M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
SKG P +V+YN +I G C+ ++D + + +GL +A TY LI G+ + G
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
A VF +M+ + I + L
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNIL 400
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +M LG ++T +I R + AL L +M+ G +I+ SL+ G C
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
A+ L D + G PN V ++ +I+ K + A E++ M+ GI+
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ G +A RLL + V+ I +V+ + L+ G ++EA NL +M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ + V P++ +YN +I G C GC+ DA + + ++ KG P+ +TY LI GF K
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 244 ERAFGVFEQM 253
E +F +M
Sbjct: 341 EDGMKLFCEM 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A L EM+ S +I+ T ++ + + + L+ ++ G++ + +F++LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-I 154
C + + A L +M +G +P++ + LL GF + N + A L+D G +
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
+VV YN +++ LC + A + M KG+ V+YN +I G G DA +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ ++K+ + PN + +T LID F K+G+ A ++++M+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 3/207 (1%)
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
HC+ D A LF E++++ P+ V F+ ++ +K+ + LY++M+ +GI
Sbjct: 56 HCIKFD--DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLD 181
++ L+ F + + L A LL + ++ G S+VT LL+ C + EA +L+D
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M G P++V YN +I G C+ +++A V + KKG++ +A+TY LI G G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
+ A + M+ + + FT L
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTAL 260
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A K+ M G P TY ++ G + +AL + +++ S + V+II ++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C + A LF + GV P+A+ + +I + G +A +L RMK G
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 121 PT 122
P+
Sbjct: 497 PS 498
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 138/268 (51%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M G P TY +V+ ++G++ AL L ++M + + N+++ +++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + A+ LF E+ G+ PN VT++ LI+C G A L + M I P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L +E ++ I +TYN+L++ C ++ EA +
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+SK P++ +YN +I G C+ ++D + + ++GL N +TYT +I GFF+
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
GD + A VF+QM++ I ++ L
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG TY+ I R+ + AL + +M+ G +I+ +SL+ G+C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ TF+ LI +A L ++M G QP +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ ++ A LL++ I A+VV +N ++ LC V A +L +M +
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P++V+YN +I C G DA +++ +L+K + PN +T+ LID FFK+G
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 246 AFGVFEQMM 254
A + E+M+
Sbjct: 347 AEKLHEEMI 355
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M LG+ P T +S++ + +A+ L D+MV G + T+L+
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D++V+ G P+ VT+ +++ K G ++ A L N+M+ I+
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ K +E A L E GI +VVTYN L++ LC G+ +A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ K + P++V++N +I ++G + +A + ++++ + P+ +TY LI+GF
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +F+ M++ + I + L
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M A + + ++I + + +V A+ L EM G+ N++ SL+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G + A +L ++E + PN VTF+ LID K G + +A +L+ M I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF N L+ A ++ V + ++ TYN L++ C +V + L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ + V+Y II G + G D A V +++ + + +TY+ L+ G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
G + A +F+ + + L I
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNI 503
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 33/288 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL M P+ T+ ++I ++G +VEA +L +EM+ + + I L+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A ++F +V PN T++ LI+ K +E EL+ M G+
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLL 180
+++GF + ++A + + V + + + ++TY+ILL LC GK+ A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 181 --------------------------------DKMMSKGVTPSLVSYNHIILGHCRKGCM 208
D S + P +V+YN +I G C K +
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+A + ++ + G PN+ TY LI + D + + ++M ++
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
V +A+ L +MV S +I+ L+ + + L +++ G++ + T+S+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
I+C + + A + +M +G +P + + LL G+ + +A L+D+ VE G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 154 I-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
T+ L+ L K EA L+D+M+ +G P LV+Y ++ G C++G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+++N++ +K N + + +ID K E A +F +M
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L EM G P+ TY S+I G +A RL M+ + N++ +L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G + A KL +E+++ + P+ +T+++LI+ +++A +++ M
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ GF K +E+ L E + G + + VTY ++ G A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M+S V +++Y+ ++ G C G +D A + + K ++ N Y +I+G K
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 240 KGDFERAFGVF 250
G A+ +F
Sbjct: 516 AGKVGEAWDLF 526
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
++ A+ LF ++V++ P+ V F+ L+ +K+ E L +M+ +GI ++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY---- 119
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
TY+I ++ C ++ A +L KMM G
Sbjct: 120 ------------------------------TYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
P +V+ + ++ G+C + DA ++++++++ G KP+ T+T LI G F A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 249 VFEQMM 254
+ +QM+
Sbjct: 210 LVDQMV 215
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
S+V +N LLS + + K +L ++M + G++ L +Y+ I CR+ + A +V+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+++K G +P+ +T + L++G+ A + +QM+ FT L
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 135/249 (54%), Gaps = 4/249 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGV--PVNIIVATSLMKGHCLL 66
+R G PS T+ S+I V +G + A+ + + M N V P + V ++++ G C +
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 67 GDINSALKLFDEIVEAGV-APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
G AL F+ V++GV PN VT++ L+ ++G +++ +L R++ G +
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+ G+ K L +A E VE G+ VV+Y+IL+ L G V EA LL KM+
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+GV P+L++Y II G C+ G +++A+ + NRIL G++ + Y LIDG +KG+
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 245 RAFGVFEQM 253
RAF + M
Sbjct: 365 RAFSMLGDM 373
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 132/275 (48%), Gaps = 41/275 (14%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y++ I + G +V+AL EMV G+ +++ + L+ G G++ AL L +++
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+ GV PN +T++ +I K+G +E+AF L+NR+ +GI+ F+ L+ G ++ L
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 141 NAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A+ +L + + GI S++TYN +++ LC G+V EA +SKGV +++Y+ ++
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLL 419
Query: 200 LGHCRKGCMDDAYSVMNRILKK-----------------------------------GLK 224
+ + +D + R L+ L
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
P+ TY +I G+ K G E A +F ++ ++ +
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+ + ++++I+ K G + KA L + K G+ L+ G +Q L A RL
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 147 DEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
D G + S VTY IL+ LC G ++A LLD M+SKG+ P+++ YN I+ G+C+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
G +DA V++R + + P+A T + +I G+ KKGD E A VF + N + F
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
YT +I ++G +V+AL L + GV +N I SL+ G C G + AL+LFD +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G+ P+ VT+ +LID K G A +L + M G+ P + I ++ G+
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY------- 770
Query: 141 NAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
C LG+ +A ++ + M VTP + + +I
Sbjct: 771 ---------------------------CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
G+C+KG M++A SV K + + + LI GF KG E A G+ +M+ + +
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSES 861
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L + +G +PSE TY +I ++G ++A +L D MV+ G+ NII+ S++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C LG A+++ + V P+A T S +I K G ME+A ++ K I
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDE------------AVEHGIASVVTYNILLSWLCG 169
F FL+KGF + +E A LL E V+ +A + L LC
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCE 888
Query: 170 LGKVVEACNLLDKMMSKGVTPS 191
G+V +A +LD+ +S + PS
Sbjct: 889 QGRVPQAIKILDE-ISSTIYPS 909
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 58 SLMKGHCLLGDINSA--LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK 115
SL+ G + D S L L D + G P+++TF LI + G M+ A E+ M
Sbjct: 102 SLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMT 161
Query: 116 LMGIQPTV--FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLG 171
+ F+ ++ GF K E A + AV+ G+ ++VTY L+S LC LG
Sbjct: 162 NKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLG 221
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
KV E +L+ ++ +G V Y++ I G+ + G + DA +++KG+ + ++Y+
Sbjct: 222 KVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYS 281
Query: 232 PLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
LIDG K+G+ E A G+ +M+ + +T +
Sbjct: 282 ILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY S+I +QG +VEALRL D + N G+ + + L+ C G A KL D +
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTVFIVKFLLKGFQKQNM 138
V G+ PN + ++ ++D K+G E A + +R K+MG + P F V ++KG+ K+
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGD 810
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+E A + E + I A + L+ C G++ EA LL +M+
Sbjct: 811 MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L + ++G E Y ++I R+GN+ A + +M G+ +I+ +++ G C
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ G ++ A DE V GV + +T+S L+D K+ +++ E+ R I +
Sbjct: 394 MAGRVSEA----DE-VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLV 448
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ LLK F A L E + TY ++ C G++ EA + +++
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
V+ + V YN II C+KG +D A V+ + +KGL + T L+ G
Sbjct: 509 RKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD 567
Query: 244 ERAFGVFEQMMAANANL 260
+ G+ + N+++
Sbjct: 568 KGILGLVYGLEQLNSDV 584
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M G PS TY +VI G V EA DE V+ GV ++I ++L+
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DE-VSKGVVGDVITYSTLLD 420
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ + +I++ L++ +EA + + V ++L+ +G+ +A LY M M + P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
++KG+ K +E A + +E + +++ V YN ++ LC G + A +L
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLI 540
Query: 182 KMMSKGV 188
++ KG+
Sbjct: 541 ELWEKGL 547
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 134/268 (50%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L++ M G P TY +VI ++G AL L ++M + ++++ ++++
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ AL LF E+ G+ P+ T+S LI C G A L + M I P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L DE ++ I ++VTYN L++ C ++ EA +
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+SK P +V+YN +I G C+ + D + + ++GL N +TYT LI GFF+
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
D + A VF+QM++ + I + L
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 132/253 (52%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T+ S+I ++G ++EA +L DEM+ + NI+ SL+
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A ++F +V P+ VT++ LI+ K + EL+ M G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ GF + + +NA + + V G+ +++TYN LL LC GK+ +A +
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P + +YN + G C+ G ++D + + + KG+KP+ + Y +I GF KK
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 241 GDFERAFGVFEQM 253
G E A+ +F +M
Sbjct: 534 GLKEEAYTLFIKM 546
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y++VI + + +V +AL L EM N G+ ++ +SL+ C G + A +L +++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E + PN VTF+ LID +K G + +A +L++ M I P + L+ GF + L+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 141 NAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A ++ V + VVTYN L++ C KVV+ L M +G+ + V+Y +I
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G + D+A V +++ G+ PN +TY L+DG K G E+A VFE + +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 260 LQITQF 265
I +
Sbjct: 483 PDIYTY 488
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M +G+ P T+T+++ + EA+ L + MV G +++ +++
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+ + AL L +++ + + + V +S +ID K ++ A L+ M GI+P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ +A RLL + +E I +VVT+N L+ GK++EA L
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M+ + + P++V+YN +I G C +D+A + ++ K P+ +TY LI+GF K
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 241 GDFERAFGVFEQM 253
+F M
Sbjct: 394 KKVVDGMELFRDM 406
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M LG + TY +I R+ + AL + +M+ G +I+ SL+ G C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ VTF+ L+ + +A L RM + G QP +
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ + A LL++ + I A VV Y+ ++ LC V +A NL +M +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P + +Y+ +I C G DA +++ +L++ + PN +T+ LID F K+G
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A +F++M+ + + I + L
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSL 351
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M LG+ PS T S++ + EA+ L D+MV G + + T+L+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + A+ L + +V G P+ VT+ +I+ K G + A L N+M+ I+
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V I ++ K +++A L E GI V TY+ L+S LC G+ +A LL
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+ + + P++V++N +I ++G + +A + + ++++ + PN +TY LI+GF
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +F M++ + + + L
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
EA+ L EMV S +I+ + L+ + + + +++ GV+ N T++++I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
+C + + A + +M +G P++ + LL GF N + A L+D+ VE G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 156 -SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
VT+ L+ L K EA L+++M+ KG P LV+Y +I G C++G D A ++
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+N++ K ++ + + Y+ +ID K + A +F +M
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L ++M G + + TYT++I + + A + +MV+ GV NI+ +L+ G
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + A+ +F+ + ++ + P+ T++++ + K G +E ++L+ + L G++P V
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ GF K+ + E AY L + E G + TYN L+ G + L+ +
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 183 MMS 185
M S
Sbjct: 581 MRS 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 34/186 (18%)
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
++ A+ LF E+V++ P+ V FS L+ +K+ + +M+++G+ ++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY---- 101
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
TYNI+++ LC ++ A +L KMM G
Sbjct: 102 ------------------------------TYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
PS+V+ N ++ G C + +A ++++++++ G +P+ +T+T L+ G F+ A
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 249 VFEQMM 254
+ E+M+
Sbjct: 192 LVERMV 197
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 146 LDEAVE--------HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
LDEAV+ S+V ++ LLS + + K + +KM GV+ +L +YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I CR+ + A +++ +++K G P+ +T L++GF A + +QM+
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 258 ANLQITQFTPL 268
FT L
Sbjct: 166 YQPDTVTFTTL 176
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 3/267 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL EM +LG P+ YT I R + EA ++ + M GV N+ ++++ G+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G++ A L+ EI+ A + PN V F L+D K + A L+ M G+ P +
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 124 FIVKFLLKGFQKQ-NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
++ L+ G K NMLE A LL E ++ V TY IL++ LC +V EA L
Sbjct: 340 YVYNCLIHGHCKSGNMLE-AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
KM ++ + PS +YN +I G+C++ M+ A + + + G++PN +T++ LIDG+
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
D + A G++ +M + +T L
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L ++M+ PS TY S+I ++ N+ +AL L EM SGV NII ++L+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C + DI +A+ L+ E+ G+ P+ VT++ LID K +M++A LY+ M GI P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
L+ GF K+ L A E + + V + L+ LC G ++ A
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFF 572
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S G+TP + SY ++ GH ++ + D + ++K G+ PN L L+ F++
Sbjct: 573 SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQA 631
Query: 241 GDFERA 246
+ ++
Sbjct: 632 NGYVKS 637
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 34/251 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L M G P+ Y +I + GN++EA+ L EM + + ++ T L+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ + A +LF ++ + P++ T++ LI K +ME+A +L + M G++P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+++T++ L+ C + + A L
Sbjct: 443 ----------------------------------NIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M KG+ P +V+Y +I H ++ M +A + + +L+ G+ PN T+ L+DGF+K+G
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Query: 242 DFERAFGVFEQ 252
A +++
Sbjct: 529 RLSVAIDFYQE 539
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M A G P TY V+ ++G+ A L ++M + +++ +++
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ AL LF E+ G+ PN VT+S LI C G A L + M I P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ F K+ L A +L DE V+ I S+VTY+ L++ C ++ EA +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P +V+YN +I G C+ +++ V + ++GL N +TY LI G F+
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
GD + A +F++M++ I + L
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 136/253 (53%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P T++++I V++G +VEA +L DEMV + +I+ +SL+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A ++F+ +V P+ VT++ LI K +E+ E++ M G+
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++G + + A + E V G+ +++TYN LL LC GK+ +A +
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P++ +YN +I G C+ G ++D + + + KG+KP+ + Y +I GF +K
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 241 GDFERAFGVFEQM 253
G E A +F++M
Sbjct: 550 GSKEEADALFKEM 562
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 141/269 (52%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L +M LG+ P+ T +S++ + EA+ L D+M +G N + +L+
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D +V G P+ VT+ V+++ K G + AF L N+M+ ++
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V I ++ G K +++A L E GI +VVTY+ L+S LC G+ +A L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ + + P + +++ +I ++G + +A + + ++K+ + P+ +TY+ LI+GF
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +FE M++ + + + L
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 139/264 (52%), Gaps = 3/264 (1%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG + TY+ +I R+ + AL + +M+ G NI+ +SL+ G+C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++ G PN VTF+ LI +A L +RM G QP +
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
++ G K+ + A+ LL++ +E G V+ YN ++ LC + +A NL +M
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNK-MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+KG+ P++V+Y+ +I C G DA +++ ++++ + P+ T++ LID F K+G
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
A ++++M+ + + I ++ L
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM PS ++ ++ + + L ++M N G+P N + L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGI 119
C + AL + ++++ G PN VT S L++ C SK + +A L ++M + G
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK--RISEAVALVDQMFVTGY 182
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
QP L+ G N A L+D V G +VTY ++++ LC G A N
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
LL+KM + P ++ YN II G C+ MDDA ++ + KG++PN +TY+ LI
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 239 KKGDFERAFGVFEQMMAANANLQITQFTPL 268
G + A + M+ N + F+ L
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A+ L EMV S +II + L+ + + + L +++ G+ N T+S+LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI- 154
+C + + A + +M +G +P + + LL G+ + A L+D+ G
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
+ VT+N L+ L K EA L+D+M++KG P LV+Y ++ G C++G D A+++
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+N++ + L+P L Y +IDG K + A +F++M + ++ L
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
P TY ++I + V E + + EM G+ N + L++G GD + A +
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+F E+V GV PN +T++ L+D K G +EKA ++ ++ ++PT++ +++G
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K +E+ + L G+ VV YN ++S C G EA L +M G P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
YN +I R G + + ++ + G +A T L+ G +++F
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ +EM G + + TY +I + G+ A + EMV+ GVP NI+ +L+ G
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + A+ +F+ + + + P T++++I+ K G +E ++L+ + L G++P V
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ GF ++ E A L E E G + + YN L+ G + L+ +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 183 MMSKG 187
M S G
Sbjct: 597 MRSCG 601
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA ++ KEM + G P+ TY +++ + G + +A+ + + + S + I ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C G + LF + GV P+ V ++ +I + GS E+A L+ MK G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
P L++ + E + L+ E G A
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G P TY +V+ ++G+ AL L ++M + + N+++ ++++
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + AL LF E+ GV PN +T+S LI C G A L + M I P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ F K+ L A +L +E ++ I ++ TY+ L++ C L ++ EA +L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+ K P++V+YN +I G C+ +D + + ++GL N +TYT LI GFF+
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
D + A VF+QM++ + I + L
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 1/266 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M A + Y++VI + + + +AL L EM N GV N+I +SL+
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G + A +L +++E + PN VTFS LID K G + KA +LY M I
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P +F L+ GF + L A ++L+ + + +VVTYN L++ C +V + L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ + V+Y +I G + D+A V +++ G+ PN LTY L+DG K
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 240 KGDFERAFGVFEQMMAANANLQITQF 265
G +A VFE + + I +
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M LG + TY +I R + AL L +M+ G +I+ SL+ G C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ VTF+ LI +A L +RM G QP +
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ + A LL++ I A+VV Y+ ++ LC +A NL +M +
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KGV P++++Y+ +I C G DA +++ ++++ + PN +T++ LID F KKG +
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A ++E+M+ + + I ++ L
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSL 364
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+M LG+ P T S++ + +A+ L D+MV G + + T+L+ G L
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+ A+ L D +V+ G P+ VT+ +++ K G + A L N+M+ I+ V I
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
++ K ++A L E G+ +V+TY+ L+S LC G+ +A LL M+ +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ P+LV+++ +I +KG + A + ++K+ + PN TY+ LI+GF
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y V+ T + + +A+ L M S +II + L+ + + + +++
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G++ N T+++LI+C + + A L +M +G +P + + LL GF N +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 141 NAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
+A L+D+ VE G VT+ L+ L K EA L+D+M+ +G P LV+Y ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C++G D A +++N++ ++ N + Y+ +ID K + A +F +M
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 260 LQITQFTPL 268
+ ++ L
Sbjct: 286 PNVITYSSL 294
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 70/134 (52%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L+ M +P+ TY ++I + V + + L EM G+ N + T+L+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G D ++A +F ++V GV PN +T+++L+D K G + KA ++ ++ ++P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 122 TVFIVKFLLKGFQK 135
++ +++G K
Sbjct: 497 DIYTYNIMIEGMCK 510
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 142/269 (52%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M LG+ PS T +S++ + +A+ L D+MV G + I T+L+
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D +V+ G PN VT+ V+++ K G ++ AF L N+M+ I+
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ K +++A L E GI +VVTY+ L+S LC G+ +A L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ K + P+LV++N +I ++G +A + + ++K+ + P+ TY LI+GF
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
++A +FE M++ + + + L
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G P+ TY V+ ++G++ A L ++M + + ++++ +++
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ AL LF E+ G+ PN VT+S LI C G A +L + M I P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ F K+ A +L D+ ++ I + TYN L++ C ++ +A +
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P L +YN +I G C+ ++D + + +GL + +TYT LI G F
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
GD + A VF+QM++ I ++ L
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG + TY +I R+ + AL L +M+ G +I+ +SL+ G+C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ +TF+ LI +A L +RM G QP +
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ ++ A+ LL++ I A VV +N ++ LC V +A NL +M +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P++V+Y+ +I C G DA +++ +++K + PN +T+ LID F K+G F
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A + + M+ + + I + L
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSL 296
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M A + ++I + + +V +AL L EM G+ N++ +SL+
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G + A +L +++E + PN VTF+ LID K G +A +L++ M I
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P +F L+ GF + L+ A ++ + V + TYN L+ C +V + L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ V+Y +I G G D+A V +++ G+ P+ +TY+ L+DG
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G E+A VF+ M + L I +T +
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T+ ++I V++G VEA +L D+M+ + +I SL+
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A ++F+ +V P+ T++ LI K +E EL+ M G+
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++G +NA ++ + V G+ ++TY+ILL LC GK+ +A +
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M + + Y +I G C+ G +DD + + + KG+KPN +TY +I G K
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 241 GDFERAFGVFEQM 253
+ A+ + ++M
Sbjct: 479 RLLQEAYALLKKM 491
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ L +++ G++ N T+++LI+C + + A L +M +G +P++ + LL G
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ + +A L+D+ VE G +T+ L+ L K EA L+D+M+ +G P+
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
LV+Y ++ G C++G +D A++++N++ ++ + + + +ID K + A +F+
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 252 QMMAANANLQITQFTPL 268
+M + ++ L
Sbjct: 210 EMETKGIRPNVVTYSSL 226
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L +EM G + TYT++I G+ A ++ +MV+ GVP +I+ + L+ G
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + AL++FD + ++ + + ++ +I+ K G ++ ++L+ + L G++P V
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ G + +L+ AY LL + E G + TYN L+ G + L+ +
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 183 MMS 185
M S
Sbjct: 526 MRS 528
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ K+M + G P TY+ ++ G + +AL + D M S + ++I + T++++
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGI 119
G C G ++ LF + GV PN VT++ +I CS ++ +++A+ L +MK G
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL--LQEAYALLKKMKEDGP 496
Query: 120 QP 121
P
Sbjct: 497 LP 498
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%)
Query: 154 IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS 213
+ S+ +N LLS + + K +L +KM G++ +L +YN +I CR+ + A +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 214 VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
++ +++K G +P+ +T + L++G+ A + +QM+ FT L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T+ ++I V++G +VEA +L DEM+ + +I +SL+
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A +F+ ++ PN VT++ LI+ K +++ EL+ M G+
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ GF + +NA + + V G+ +++TYN LL LC GK+ +A +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + + P++ +YN +I G C+ G ++D + + + KG+KP+ + Y +I GF +K
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 241 GDFERAFGVFEQM 253
G E A +F +M
Sbjct: 554 GLKEEADALFRKM 566
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G P+ TY V+ ++G++ A L ++M + + N+++ ++++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + AL LF E+ GV PN +T+S LI C A L + M I P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F K+ L A +L DE ++ I + TY+ L++ C ++ EA ++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+SK P++V+YN +I G C+ +D+ + + ++GL N +TYT LI GFF+
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
D + A VF+QM++ + I + L
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M A + Y++VI + + + +AL L EM N GV N+I +SL+
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C + A +L +++E + PN VTF+ LID K G + +A +LY+ M I
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P +F L+ GF + L+ A + + + +VVTYN L++ C ++ E L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ + V+Y +I G + D+A V +++ G+ PN +TY L+DG K
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
G E+A VFE + + I +
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 141/269 (52%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M LG+ PS T +S++ + +A+ L D+MV G + I T+L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D +V+ G PN VT+ V+++ K G ++ AF L N+M+ I+
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ K ++A L E G+ +V+TY+ L+S LC + +A L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ + + P++V++N +I ++G + +A + + ++K+ + P+ TY+ LI+GF
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +FE M++ + + + L
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 139/263 (52%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ LG + TY +I R+ + AL L +M+ G +I+ +SL+ G+C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ +TF+ LI +A L +RM G QP +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ ++ A+ LL++ I A+VV Y+ ++ LC +A NL +M +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KGV P++++Y+ +I C DA +++ ++++ + PN +T+ LID F K+G
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A ++++M+ + + I ++ L
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSL 371
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
G Y ++ + + +A+ L MV S +I L+ + + + L ++
Sbjct: 51 GDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ G++ N T+++LI+C + + A L +M +G +P++ + LL G+
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ +A L+D+ VE G +T+ L+ L K EA L+D+M+ +G P+LV+Y
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
++ G C++G +D A++++N++ ++ N + Y+ +ID K + A +F +M
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 258 ANLQITQFTPL 268
+ ++ L
Sbjct: 291 VRPNVITYSSL 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L +EM G + + TYT++I + + A + +MV+ GV NI+ +L+ G
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + A+ +F+ + + + P T++++I+ K G +E ++L+ + L G++P V
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
I ++ GF ++ + E A L + E G
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDG 570
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 4/257 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL+ M + IP++ TY ++I V+Q +A+RL M G +N + + L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G A+ L+ ++ E G PN V +SVL+D + G +A E+ NRM G P
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ L+KGF K + E A ++ E + G + + Y++L+ LCG+G+V EA +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL---KKGLKPNALTYTPLIDGF 237
KM++ G+ P V+Y+ II G C G MD A + + +L + +P+ +TY L+DG
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 238 FKKGDFERAFGVFEQMM 254
+ D RA + M+
Sbjct: 551 CMQKDISRAVDLLNSML 567
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ + M +P TY +++ ++ + EA+ L DEM + G + ++ L+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C GD+ KL D + G PN VT++ LI G ++KA L RM P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L+ G KQ +A RLL E G + Y++L+S L GK EA +L
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM KG P++V Y+ ++ G CR+G ++A ++NR++ G PNA TY+ L+ GFFK
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445
Query: 241 GDFERAFGVFEQM 253
G E A V+++M
Sbjct: 446 GLCEEAVQVWKEM 458
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 5/254 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNI----IVATSLMKGHCLLGDINSALKL 75
++ SV+ + +G L D +VNS + +NI + ++K C L ++ A+++
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F + E P+ T+ L+D K +++A L + M+ G P+ I L+ G K
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 136 QNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ L +L+D G + + VTYN L+ LC GK+ +A +LL++M+S P+ V+
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
Y +I G ++ DA +++ + ++G N Y+ LI G FK+G E A ++ +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 255 AANANLQITQFTPL 268
I ++ L
Sbjct: 390 EKGCKPNIVVYSVL 403
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG----VAPNAV 89
+V+ R K + + +N+I+ L + L+ +D +V + ++PN +
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLY---------HRGLEFYDYVVNSNMNMNISPNGL 188
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
+F+++I K+ +++A E++ M P + L+ G K+ ++ A LLDE
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 150 VEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
G + S V YN+L+ LC G + L+D M KG P+ V+YN +I G C KG +
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
D A S++ R++ PN +TY LI+G K+ A + M
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++M G P+ Y+ ++ R+G EA + + M+ SG N +SLMK
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G A++++ E+ + G + N +SVLID +G +++A ++++M +GI+P
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAV----EHGIASVVTYNILLSWLCGLGKVVEAC 177
++KG ++ A +L E + VVTYNILL LC + A
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAV 560
Query: 178 NLLDKMMSKGVTPSLVSYN 196
+LL+ M+ +G P +++ N
Sbjct: 561 DLLNSMLDRGCDPDVITCN 579
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M +G+ P Y ++I + G V +A+ L D M GV + + SL+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A +L ++V + PN +TF+ +ID K G +A +LY M + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ G ++ A ++LD V G + VVTYN L++ C +V E L
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +G+ ++YN II G+ + G D A + +R+ +PN TY+ L+ G
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMN 394
Query: 241 GDFERAFGVFEQMMAANANLQITQF 265
E+A +FE M + L IT +
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTY 419
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGN-VVEALRLKDEMVNSGVPVNIIVATS 58
+A ++ +M G+ P T +S+I G C QGN V +A+ L +M G ++++ +
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFC--QGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ G C +G +N A++LFD + GV +AVT++ L+ G A L M +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
I P V ++ F K+ A +L +E + V TYN L++ LC G+V EA
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+LD M++KG P +V+YN +I G C+ +D+ + + ++GL + +TY +I G+
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 238 FKKGDFERAFGVFEQM 253
F+ G + A +F +M
Sbjct: 360 FQAGRPDAAQEIFSRM 375
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L+++M +P+ T+T+VI V++G EA++L +EM V ++ SL+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ G ++ A ++ D +V G P+ VT++ LI+ K +++ +L+ M G+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+++G+ + + A + ++ TY+ILL LC +V +A L +
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M + + +YN +I G C+ G ++DA+ + + KGLKP+ ++YT +I GF +K
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 242 DFERAFGVFEQM 253
++++ ++ +M
Sbjct: 466 QWDKSDLLYRKM 477
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+Y VI R V AL + +M+ G +++ +SL+ G C + A+ L ++
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G P+ V ++ +ID S KIG + A EL++RM+ G++ L+ G
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+A RL+ + V I +V+T+ ++ GK EA L ++M + V P + +YN +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
I G C G +D+A +++ ++ KG P+ +TY LI+GF K + +F +M
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 33 NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFS 92
N+ E + L +M+ S +I+ + ++ + + + LF + G+ + +++
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 93 VLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
++I+C + A + +M G +P V V L+ GF + N + +A L+ + E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 153 GI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
G VV YN ++ C +G V +A L D+M GV V+YN ++ G C G DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+M ++ + + PN +T+T +ID F K+G F A ++E+M + + + L
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 139/256 (54%), Gaps = 3/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++++ M + G IP YT ++ ++GNV A++L ++M + G P N + +L++
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+LG +N +L+ + +++ G+APNA T+S L++ + K ++A +L + + + G +P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL GF K+ ++A L E G A+VV+YNILL LC G+ EA +LL
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK--KGLKPNALTYTPLIDGFF 238
+M PS+V+YN +I G + A V+ + K + A +Y P+I
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 239 KKGDFERAFGVFEQMM 254
K+G + ++M+
Sbjct: 365 KEGKVDLVVKCLDEMI 380
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P+ T ++ + + +A+R+ + MV+SG+ + T L+ C G++ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++L +++ + G N VT++ L+ +GS+ ++ + R+ G+ P F FLL+
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 133 FQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
K+ + A +LLDE V+ G ++V+YN+LL+ C G+ +A L ++ +KG +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+VSYN ++ C G ++A S++ + P+ +TY LI+ G E+A V +
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 252 QMMAANANLQIT 263
+M N ++T
Sbjct: 341 EMSKGNHQFRVT 352
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P+ TY+ ++ ++ EA++L DE++ G N++ L+ G C G + A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ LF E+ G N V++++L+ C G E+A L M P+V L+
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 133 FQKQNMLENAYRLLDEAVE--HGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
E A ++L E + H + +YN +++ LC GKV LD+M+ +
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 190 PSLVSYNHI-----------------------------------ILGHCRKGCMDDAYSV 214
P+ +YN I I CRKG A+ +
Sbjct: 386 PNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQL 445
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + + G P+A TY+ LI G +G F A V M
Sbjct: 446 LYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+++ + + +V G PN + L+ K ++KA + M GI P
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
+L+ K+ + A +L+++ +HG S VTYN L+ LC LG + ++ ++++M K
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G+ P+ +Y+ ++ ++ D+A +++ I+ KG +PN ++Y L+ GF K+G + A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 247 FGVFEQMMAANANLQITQFTPL 268
+F ++ A + + L
Sbjct: 266 MALFRELPAKGFKANVVSYNIL 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 4/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV--NSGVPVNIIVATSL 59
A LL EM PS TY +I + G +AL++ EM N V +
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ C G ++ +K DE++ PN T++ + +++AF + +
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
T K ++ ++ A++LL E G TY+ L+ LC G A
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479
Query: 179 LLDKMM-SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+L M S+ P++ ++N +ILG C+ D A V +++K PN TY L++G
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 238 FKKGDFERAFGVFEQM 253
+ + E A V +++
Sbjct: 540 AHEDELELAKEVLDEL 555
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M A + ++I + + +V +AL L EM G+ N++ +SL+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G + A +L +++E + PN VTF+ LID K G +A +LY+ M I
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P +F L+ GF + L+ A ++ + V VVTYN L+ C +V + L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +G+ V+Y +I G G D+A V +++ G+ P+ +TY+ L+DG
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G E+A VF+ M + L I +T +
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 140/269 (52%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A LL +M LG+ PS T +S++ + +A+ L D+MV G + I T+L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G L + A+ L D +V+ G PN VT+ V+++ K G + A L N+M+ I+
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V I ++ K +++A L E GI +VVTY+ L+S LC G+ +A L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M+ K + P+LV++N +I ++G +A + + ++K+ + P+ TY L++GF
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
++A +FE M++ + + + L
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
++M+ L + TY +I R+ + AL L +M+ G +I+ +SL+ G+C
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
I+ A+ L D++VE G P+ +TF+ LI +A L +RM G QP +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K+ + A LL++ I A VV +N ++ LC V +A NL +M +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P++V+Y+ +I C G DA +++ +++K + PN +T+ LID F K+G F
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A +++ M+ + + I + L
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSL 371
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M P+ T+ ++I V++G VEA +L D+M+ + +I SL+
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A ++F+ +V P+ VT++ LI K +E EL+ M G+
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++G +NA ++ + V G+ ++TY+ILL LC GK+ +A +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M + + Y +I G C+ G +DD + + + KG+KPN +TY +I G K
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 241 GDFERAFGVFEQM 253
+ A+ + ++M
Sbjct: 554 RLLQEAYALLKKM 566
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
G Y ++ + + +A+ L MV S +I+ L+ + + + L ++
Sbjct: 51 GDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK 110
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ + T+++LI+C + + A L +M +G +P++ + LL G+
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ +A L+D+ VE G +T+ L+ L K EA L+D+M+ +G P+LV+Y
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
++ G C++G D A +++N++ ++ + + + +ID K + A +F++M
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 258 ANLQITQFTPL 268
+ ++ L
Sbjct: 291 IRPNVVTYSSL 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L +EM G + TYT++I G+ A ++ +MV+ GVP +I+ + L+ G
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + AL++FD + ++ + + ++ +I+ K G ++ ++L+ + L G++P V
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ G + +L+ AY LL + E G + + TYN L+ G + L+ +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 183 MMS 185
M S
Sbjct: 601 MRS 603
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ K+M + G P TY+ ++ G + +AL + D M S + ++I + T++++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGI 119
G C G ++ LF + GV PN VT++ +I CS ++ +++A+ L +MK G
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL--LQEAYALLKKMKEDGP 571
Query: 120 QP 121
P
Sbjct: 572 LP 573
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 140/253 (55%), Gaps = 2/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LKEM P+ T+ +I + N+ ++++ EM++ V N+I SL+
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G I+ A+ + D++V AGV PN +T++ LI+ K +++A +++ +K G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T + L+ + K +++ + L +E GI V TYN L++ LC G + A L
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D++ SKG+ P LV+++ ++ G+CRKG A ++ + K GLKP LTY ++ G+ K+
Sbjct: 460 DQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 241 GDFERAFGVFEQM 253
G+ + A + QM
Sbjct: 519 GNLKAATNMRTQM 531
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 133/252 (52%), Gaps = 1/252 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ KEM P+ +Y S+I G + EA+ ++D+MV++GV N+I +L+ G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C + AL +F + G P +++LID K+G ++ F L M+ GI P V
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ G + +E A +L D+ G+ +VT++IL+ C G+ +A LL +M
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK-KGLKPNALTYTPLIDGFFKKGD 242
G+ P ++YN ++ G+C++G + A ++ ++ K + L+ N +Y L+ G+ +KG
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 243 FERAFGVFEQMM 254
E A + +M+
Sbjct: 557 LEDANMLLNEML 568
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 140/256 (54%), Gaps = 5/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGN--VVEALRLKDEMVNSGVPVNIIVATS 58
A ++++M+ G P+ +Y ++I G C GN + +A + EMV + V N+
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L+ G ++ ++K+F E+++ V PN ++++ LI+ G + +A + ++M G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEAC 177
+QP + L+ GF K +ML+ A + G + + YN+L+ C LGK+ +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
L ++M +G+ P + +YN +I G CR G ++ A + +++ KGL P+ +T+ L++G+
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Query: 238 FKKGDFERAFGVFEQM 253
+KG+ +A + ++M
Sbjct: 481 CRKGESRKAAMLLKEM 496
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 4/215 (1%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI- 101
EM+ + N+ ++ C G +N A + +++ G +PN V+++ LID K+
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 102 --GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVV 158
G M KA + M + P + L+ GF K + L + ++ E ++ + +V+
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 159 TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
+YN L++ LC GK+ EA ++ DKM+S GV P+L++YN +I G C+ + +A + +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+G P Y LID + K G + F + E+M
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
KEM P+ T+ VI + G + +A + ++M G N++ +L+ G+C L
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 67 ---GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G + A + E+VE V+PN TF++LID K ++ + +++ M ++P V
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G + A + D+ V G+ +++TYN L++ C + EA ++
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ +G P+ YN +I +C+ G +DD +++ + ++G+ P+ TY LI G + G+
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 243 FERAFGVFEQMMA 255
E A +F+Q+ +
Sbjct: 452 IEAAKKLFDQLTS 464
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++ E++ + PN TF+V+I+ K G M KA ++ MK+ G P V L+ G+
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 135 K---QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
K + A +L E VE+ ++ ++ T+NIL+ + + + +M+ + V P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+++SYN +I G C G + +A S+ ++++ G++PN +TY LI+GF K + A +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG-VPVNIIVATSLM 60
A LLKEM +G P TY V+ ++GN+ A ++ +M + +N+ L+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVL 94
+G+ G + A L +E++E G+ PN +T+ ++
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
T +I T + VV AL + M + G+ N++ +SL+ G C G + A + E+
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+ PN +TFS LID +K G + K +Y M M I P VF L+ G N ++
Sbjct: 112 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 142 AYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A ++LD + G +VVTY+ L + +V + LLD M +GV + VS N +I
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G+ + G +D A V + GL PN +Y ++ G F G+ E+A FE M +L
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 261 QITQFT 266
I +T
Sbjct: 292 DIITYT 297
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG 102
+M+ G+ +I+ A+SL+ G CL I A+ + ++ + G+ + V ++LID K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYN 161
+ A E+ RMK GI P V L+ G K L +A R L E I +V+T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
L+ GK+ + ++ M+ + P++ +Y+ +I G C +D+A +++ ++ K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G PN +TY+ L +GFFK + + + M
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++LK M+ G P+ TY+S+I + G + +A R EM + + N+I ++L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G ++ ++ +++ + PN T+S LI +++A ++ + M G P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLL 180
V L GF K + +++ +LLD+ + G+A+ V+ N L+ GK+ A +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S G+ P++ SYN ++ G G ++ A S + K + +TYT +I G K
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 241 GDFERAFGVFEQM 253
+ A+ +F ++
Sbjct: 307 CMVKEAYDLFYKL 319
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLG 171
+M +GI+P + L+ GF N +++A + + + GI VV IL+ LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
VV A +L +M +G++P++V+Y+ +I G C+ G + DA ++ + K + PN +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 232 PLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
LID + K+G + V++ M+ + + + ++ L
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + L EM + P+ T++++I ++G + + + M+ + N+ +SL+
Sbjct: 102 AERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIY 161
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ ++ A+K+ D ++ G PN VT+S L + K ++ +L + M G+
Sbjct: 162 GLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA 221
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
L+KG+ + ++ A + +G I ++ +YNI+L+ L G+V +A +
Sbjct: 222 NTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 281
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M +++Y +I G C+ + +AY + ++ K ++P+ YT +I +
Sbjct: 282 EHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRA 341
Query: 241 G 241
G
Sbjct: 342 G 342
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K M + P+ TY+S+I V EA+++ D M++ G N++ ++L G
Sbjct: 142 KMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKS 201
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
++ +KL D++ + GVA N V+ + LI + G ++ A ++ M G+ P +
Sbjct: 202 SRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+L G +E A + + ++TY I++ +C V EA +L K+
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
K V P +Y +I R G +A +NR +K ++ N
Sbjct: 322 KRVEPDFKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQN 361
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 127/225 (56%), Gaps = 2/225 (0%)
Query: 31 QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVT 90
+G V +AL ++ G V I+ ++KG + I A +L +++ G APN VT
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVT 288
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
F LI+ K G M++AF+L+ M+ GI+P + L+ G+ K ML ++L +A+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
G+ VV ++ + G + A + +M+ +G++P++V+Y +I G C+ G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+A+ + +ILK+G++P+ +TY+ LIDGF K G+ F ++E M+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++S I V+ G++ A + M+ G+ N++ T L+KG C G I A ++ +I
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
++ G+ P+ VT+S LID K G++ F LY M MG P V I L+ G KQ ++
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+A R + + I +VV +N L+ C L + EA + M G+ P + ++ +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ +G +++A + R+ K GL+P+AL Y LID F K
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 36/298 (12%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L ++M +G+ P Y ++ +QG ++ A+R +M+ + +N++V SL+ G C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L + ALK+F + G+ P+ TF+ ++ S G +E+A L+ RM MG++P
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 125 IVKFLLKGFQKQ-----------------------------------NMLENAYRLLDEA 149
L+ F K + +E+A + +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 150 VEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
+E + +VTYN ++ C L ++ EA + + + P+ V+ +I C+ M
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
D A + + + +KG KPNA+TY L+D F K D E +F +FE+M + I ++
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL + G P+ T+ ++I ++G + A L M G+ ++I ++L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ G + KLF + + GV + V FS ID K G + A +Y RM GI
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V L+KG + + A+ + + ++ G+ S+VTY+ L+ C G + L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ M+ G P +V Y ++ G ++G M A ++L + ++ N + + LIDG+ +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
F+ A VF M + FT
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFT 535
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L K M G P Y+++I + G + +L + ++ GV ++++V +S +
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ GD+ +A ++ ++ G++PN VT+++LI + G + +AF +Y ++ G++P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ L+ GF K L + + L ++ ++ G VV Y +L+ L G ++ A
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM+ + + ++V +N +I G CR D+A V + G+KP+ T+T ++ +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 241 GDFERAFGVFEQM 253
G E A +F +M
Sbjct: 545 GRLEEALFLFFRM 557
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L M +G P Y ++I + L+L D M + + +I V ++
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
I A K F+ ++E + P+ VT++ +I + +++A ++ +K+ P
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ K N ++ A R+ E G + VTY L+ W + + L ++M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
KG++PS+VSY+ II G C++G +D+A ++ ++ + L P+ + Y LI G+ K G
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 244 ERAFGVFEQMM 254
A ++E M+
Sbjct: 793 VEAALLYEHML 803
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 110/206 (53%), Gaps = 1/206 (0%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG 83
VI + + +A + + ++ + +I+ +++ G+C L ++ A ++F+ +
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
PN VT ++LI K M+ A +++ M G +P L+ F K +E ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 144 RLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
+L +E E GI+ S+V+Y+I++ LC G+V EA N+ + + + P +V+Y +I G+
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNAL 228
C+ G + +A + +L+ G+KP+ L
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 67/301 (22%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSLMKGHC 64
LK R + ++ ++ +R G A ++ DEM+ N G N+
Sbjct: 87 LKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNV----------- 135
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI---QP 121
LG I D ++A V L++C + G ++KA E++ +G+ Q
Sbjct: 136 -LGSIR------DRSLDADVC------KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQD 182
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVEA--- 176
+V+ + L G + +++ + + D+ GI + V + +L L G+V +A
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHF---DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239
Query: 177 ---------------CN----------------LLDKMMSKGVTPSLVSYNHIILGHCRK 205
CN LL ++ G P++V++ +I G C++
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
G MD A+ + + ++G++P+ + Y+ LIDG+FK G +F Q + L + F
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 266 T 266
+
Sbjct: 360 S 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ + ++ + P+ T T +I + ++ A+R+ M G N + LM
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
DI + KLF+E+ E G++P+ V++S++ID K G +++A ++++ + P
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
V L++G+ K L A L + + +G+
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 62/120 (51%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M G P+ TY ++ + ++ + +L +EM G+ +I+ + ++
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A +F + ++A + P+ V +++LI K+G + +A LY M G++P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 127/225 (56%), Gaps = 2/225 (0%)
Query: 31 QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVT 90
+G V +AL ++ G V I+ ++KG + I A +L +++ G APN VT
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVT 288
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
F LI+ K G M++AF+L+ M+ GI+P + L+ G+ K ML ++L +A+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
G+ VV ++ + G + A + +M+ +G++P++V+Y +I G C+ G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+A+ + +ILK+G++P+ +TY+ LIDGF K G+ F ++E M+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 136/273 (49%), Gaps = 15/273 (5%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L ++M +G+ P Y ++ +QG ++ A+R +M+ + +N++V SL+ G C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAF----------ELYNRM 114
L + ALK+F + G+ P+ TF+ ++ ++ ME AF +L++ M
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVM----RVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
+ I + + ++ K + +E+A + + +E + +VTYN ++ C L ++
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
EA + + + P+ V+ +I C+ MD A + + + +KG KPNA+TY L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 234 IDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+D F K D E +F +FE+M + I ++
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL + G P+ T+ ++I ++G + A L M G+ ++I ++L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ G + KLF + + GV + V FS ID K G + A +Y RM GI
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V L+KG + + A+ + + ++ G+ S+VTY+ L+ C G + L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ M+ G P +V Y ++ G ++G M A ++L + ++ N + + LIDG+ +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
F+ A VF M + FT
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFT 535
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVE------ALRLKDEMVNSGVPVNIIV 55
A K+ + M G P T+T+V+ + + + L+L D M + + +I V
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 56 ATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK 115
++ I A K F+ ++E + P+ VT++ +I + +++A ++ +K
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 116 LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVV 174
+ P + L+ K N ++ A R+ E G + VTY L+ W +
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ L ++M KG++PS+VSY+ II G C++G +D+A ++ ++ + L P+ + Y LI
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 235 DGFFKKGDFERAFGVFEQMM 254
G+ K G A ++E M+
Sbjct: 755 RGYCKVGRLVEAALLYEHML 774
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 106/194 (54%), Gaps = 1/194 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A + + ++ + +I+ +++ G+C L ++ A ++F+ + PN VT ++LI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
K M+ A +++ M G +P L+ F K +E +++L +E E GI+
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 156 -SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
S+V+Y+I++ LC G+V EA N+ + + + P +V+Y +I G+C+ G + +A +
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 215 MNRILKKGLKPNAL 228
+L+ G+KP+ L
Sbjct: 770 YEHMLRNGVKPDDL 783
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 122/234 (52%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L K M G P Y+++I + G + +L + ++ GV ++++V +S +
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ GD+ +A ++ ++ G++PN VT+++LI + G + +AF +Y ++ G++P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ L+ GF K L + + L ++ ++ G VV Y +L+ L G ++ A
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
KM+ + + ++V +N +I G CR D+A V + G+KP+ T+T ++
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++S I V+ G++ A + M+ G+ N++ T L+KG C G I A ++ +I
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
++ G+ P+ VT+S LID K G++ F LY M MG P V I L+ G KQ ++
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+A R + + I +VV +N L+ C L + EA + M G+ P + ++ +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 199 ILGHCRKGCMDDAY 212
+ R M+DA+
Sbjct: 538 M----RVSIMEDAF 547
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 70/305 (22%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSLM 60
A K + G PS T V+ +R G A ++ DEM+ N G N+
Sbjct: 86 ALKYFRWAEISGKDPSFYTIAHVL---IRNGMFDVADKVFDEMITNRGKDFNV------- 135
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI- 119
LG I D ++A V L++C + G ++KA E++ +G+
Sbjct: 136 -----LGSIR------DRSLDADVC------KFLMECCCRYGMVDKALEIFVYSTQLGVV 178
Query: 120 --QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVE 175
Q +V+ + L G + +++ + + D+ GI + V + +L L G+V +
Sbjct: 179 IPQDSVYRMLNSLIGSDRVDLIADHF---DKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 176 A------------------CN----------------LLDKMMSKGVTPSLVSYNHIILG 201
A CN LL ++ G P++V++ +I G
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
C++G MD A+ + + ++G++P+ + Y+ LIDG+FK G +F Q + L
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 262 ITQFT 266
+ F+
Sbjct: 356 VVVFS 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ + ++ + P+ T T +I + ++ A+R+ M G N + LM
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
DI + KLF+E+ E G++P+ V++S++ID K G +++A ++++ + P
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
V L++G+ K L A L + + +G+
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 62/120 (51%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M G P+ TY ++ + ++ + +L +EM G+ +I+ + ++
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A +F + ++A + P+ V +++LI K+G + +A LY M G++P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 1/254 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ +Y+ +I G + EA LKD+M G + T L+K C G I+ A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FDE++ G PN T++VLID + G +E+A + +M I P+V L+ G+ K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ A+ LL + +V T+N L+ LC +GK +A +LL +M+ G++P +VS
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
YN +I G CR+G M+ AY +++ + ++P+ LT+T +I+ F K+G + A M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 255 AANANLQITQFTPL 268
+L T L
Sbjct: 504 RKGISLDEVTGTTL 517
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 140/264 (53%), Gaps = 2/264 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
+ M A G++ Y +++ + G A +++ G ++ + TSL+ G C
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 67 GDINSALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
++ ALK+FD + E APN+V++S+LI ++G +E+AF L ++M G QP+
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+K + +++ A+ L DE + G +V TY +L+ LC GK+ EA + KM+
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+ PS+++YN +I G+C+ G + A+ ++ + K+ KPN T+ L++G + G
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
+A + ++M+ + I + L
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVL 447
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +M G PS TYT +I +G + +A L DEM+ G N+ T L+ G C
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G I A + ++V+ + P+ +T++ LI+ K G + AFEL M+ +P V
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L++G + A LL +++G++ +V+YN+L+ LC G + A LL M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ P +++ II C++G D A + + +L+KG+ + +T T LIDG K G
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 244 ERAFGVFEQMM 254
A + E ++
Sbjct: 528 RDALFILETLV 538
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL M P T+T++I +QG A M+ G+ ++ + T+L+
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G AL + + +V+ + + +V++D SK +++ + ++ +G+ P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+V L+ G + + ++R+L+ G + +V Y I+++ LC G+V EA LL
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
M GV+P+ V+Y ++ G+ G +D A + ++++G + N Y+ L+ GF
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G P+ TYT +I R G + EA + +MV + ++I +L+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G + A +L + + PN TF+ L++ ++G KA L RM G+ P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G ++ + AY+LL I +T+ +++ C GK A L
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 181 DKMMSKGVTPSLVSYNHIILGHCR----------------------------------KG 206
M+ KG++ V+ +I G C+ KG
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Query: 207 C-MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
C + + +++ +I K GL P+ +TYT L+DG + GD +F + E M
Sbjct: 560 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 20/273 (7%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+L ++ LG +PS TYT+++ +R G++ + R+ + M SG N+ T ++ G C
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + A KL + ++GV+PN VT++V++ G +++A E M G +
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 125 IVKFLLKGF----------QKQNMLENAYRLLDEAVEHGIASVVTY---------NILLS 165
I LL+GF ++ + + A R D + + SVV L++
Sbjct: 688 IYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVT 747
Query: 166 WLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP 225
LC G+ E+ +L+ ++ +GV + + I+ +C K ++ +LK G P
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVP 806
Query: 226 NALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
+ ++ +I G K+GD ERA + +++ +N
Sbjct: 807 SFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS TY ++I + G VV A L M N+ LM+G C +G A+ L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+++ G++P+ V+++VLID + G M A++L + M I+P ++ F K
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC----------------- 177
Q + A L + GI+ VT L+ +C +GK +A
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 178 -NLLDKMMSKG-----------------VTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
N++ M+SKG + PS+V+Y ++ G R G + ++ ++ +
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
G PN YT +I+G + G E A + M + + +T
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M +G P T+ ++I +G V+EA L ++MV G+ ++++ +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +GD SAL L ++ E + P+ V +S +ID K G A L++ M GI P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF ++ GF +A RLL + +E I V+T+N L+S GK+ EA L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDA----------------------------- 211
D+M+ + + P V+YN +I G C+ DDA
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 212 --YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
++ I ++GL N TY LI GF + + A +F++M++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL +M P Y+++I + G+ +A L EM+ G+ N+ ++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A +L +++E + P+ +TF+ LI S K G + +A +L + M I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
++ GF K N ++A + D VVT+N ++ C +V E LL
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
++ +G+ + +YN +I G C ++ A + ++ G+ P+ +T L+ GF +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 242 DFERAFGVFEQMMAANANLQITQF 265
E A +FE + + +L +
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAY 540
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 32/286 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL++M P T+ ++I V++G + EA +L DEM++ + + + S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 62 GHCLLGDINSALKLFD-------------------------------EIVEAGVAPNAVT 90
G C + A +FD EI G+ N T
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
++ LI ++ ++ A +L+ M G+ P LL GF + LE A L +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
I V YNI++ +C KV EA +L + GV P + +YN +I G C K +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
DA + +++ G +P+ TY LI G K G+ +++ + +M +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG 83
VIG VR A+ L +M +P+NI L+K C ++ +L F ++ + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 84 VAPNAVTFSVLI----------DCSSKIGSMEK-----AFELYNRMKLMGIQPTVFIVKF 128
P+ VTF+ L+ + + G M + A L+++M +G+ P V
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+ G + + A L+++ V G+ VVTY +++ +C +G A NLL KM
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ P +V Y+ II C+ G DA + + +L+KG+ PN TY +IDGF G + A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 248 GVFEQMMAANANLQITQFTPL 268
+ M+ N + F L
Sbjct: 352 RLLRDMIEREINPDVLTFNAL 372
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 2/243 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K M L P T+ ++I R V E ++L E+ G+ N +L+ G C +
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
++N+A LF E++ GV P+ +T ++L+ + +E+A EL+ +++ I
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K + ++ A+ L HG+ V TYN+++S CG + +A L KM
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G P +YN +I G + G +D + +++ + G +A T + D G ++
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDK 659
Query: 246 AFG 248
+F
Sbjct: 660 SFS 662
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 21/248 (8%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
++ LG+ P T+ +++ + + EAL L MV +G
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----------------- 208
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
A+ LFD++VE G+ P +TF+ LI+ G + +A L N+M G+ V
Sbjct: 209 ---EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 128 FLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
++ G K ++A LL + E H VV Y+ ++ LC G +A L +M+ K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G+ P++ +YN +I G C G DA ++ ++++ + P+ LT+ LI K+G A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 247 FGVFEQMM 254
+ ++M+
Sbjct: 386 EKLCDEML 393
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L G ++ A+ FD +V + AV + +I ++ + A LY +M++
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKV---- 173
I ++ L+K F + L + + + G VVT+N LL LC ++
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 174 -----------VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
+EA L D+M+ G+TP ++++N +I G C +G + +A +++N+++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
L + +TY +++G K GD + A + +M
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 2/266 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +M G +P+ TY ++I ++G + +A+ + + M + + N L+K
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C +++ A+ + ++++E V P+ VT++ LID + G+ + A+ L + M G+ P
Sbjct: 437 GYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ K +E A L D + G+ +VV Y L+ C GKV EA +L
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+KM+SK P+ +++N +I G C G + +A + +++K GL+P T T LI K
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 241 GDFERAFGVFEQMMAANANLQITQFT 266
GDF+ A+ F+QM+++ +T
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYT 641
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 2/240 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TY ++ + GNV EA + ++V +G+ + TSL+ G+C D++SA K+
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F+E+ G N V ++ LI +++A +L+ +MK PTV L+K
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
A L+ E E GI ++ TY +L+ LC K +A LL +M+ KG+ P++++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
YN +I G+C++G ++DA V+ + + L PN TY LI G+ K + +A GV +M+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 4/269 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A K+ EM G +E YT +I G CV + + EA+ L +M + + T L+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR-RIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
K C + AL L E+ E G+ PN T++VLID EKA EL +M G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V L+ G+ K+ M+E+A +++ ++ + TYN L+ C V +A +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L+KM+ + V P +V+YN +I G CR G D AY +++ + +GL P+ TYT +ID K
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
E A +F+ + N + +T L
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL M G +P + TYTS+I + + V EA L D + GV N+++ T+L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G ++ A + ++++ PN++TF+ LI G +++A L +M +G+QP
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
TV L+ K ++AY + + G TY + C G++++A +++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
KM GV+P L +Y+ +I G+ G + A+ V+ R+ G +P+ T+ LI
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
G Y +++ + R G V E ++ EM+ V NI ++ G+C LG++ A + +
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
IVEAG+ P+ T++ LI + ++ AF+++N M L G + L+ G
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 139 LENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
++ A L + + +V TY +L+ LCG + EA NL+ +M G+ P++ +Y
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+I C + + A ++ ++L+KGL PN +TY LI+G+ K+G E A V E M
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 138/252 (54%), Gaps = 10/252 (3%)
Query: 6 LKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L E R L P+ TY +I G C + NV +A+ + ++M+ V +++ SL+ G C
Sbjct: 418 LMESRKLS--PNTRTYNELIKGYC--KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+ +SA +L + + G+ P+ T++ +ID K +E+A +L++ ++ G+ P V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAV-EHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ G+ K ++ A+ +L++ + ++ + + +T+N L+ LC GK+ EA L +KM
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ G+ P++ + +I + G D AYS ++L G KP+A TYT I + ++G
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 244 ERAFGVFEQMMA 255
A E MMA
Sbjct: 654 LDA----EDMMA 661
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 20/270 (7%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L ++M +G P+ T T +I ++ G+ A +M++SG + T+ ++ +C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT-- 122
G + A + ++ E GV+P+ T+S LI +G AF++ RM+ G +P+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 123 --VFIVKFLLK---GFQK---------QNMLE--NAYRLLDEAVEHGIA-SVVTYNILLS 165
+ ++K LL+ G QK NM+E LL++ VEH + + +Y L+
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 166 WLCGLGKVVEACNLLDKMM-SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
+C +G + A + D M ++G++PS + +N ++ C+ ++A V++ ++ G
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
P + LI G +KKG+ ER VF+ ++
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
++M + G P TYT+ I T R+G +++A + +M +GV ++ +SL+KG+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLID-----------------CS-SKIGSMEKA 107
LG N A + + + G P+ TF LI C+ S + +
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEH-GIA-SVVTYNILLS 165
EL +M + P + L+ G + L A ++ D + GI+ S + +N LLS
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 166 WLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP 225
C L K EA ++D M+ G P L S +I G +KG + SV +L+ G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 226 NALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ L + +IDG K+G E + +F M
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVM 892
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 74/271 (27%)
Query: 24 VIGTCVRQGNVVEALRL-----KDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
+I +C G+ + L L KDE + I +L+ G ++ +++ E
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
++E V PN T++ +++ K+G++E+A + +++ G+ P F L+ G+ ++
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 139 LENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
L++A+++ +E M KG + V+Y H+
Sbjct: 269 LDSAFKVFNE----------------------------------MPLKGCRRNEVAYTHL 294
Query: 199 ILGHCRKGCMDDA------------------YSVMNRIL-----------------KKGL 223
I G C +D+A Y+V+ + L + G+
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
KPN TYT LID + FE+A + QM+
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSLMKG 62
+LL++M P+ +Y +I GN+ A ++ D M N G+ + +V +L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C L N A K+ D+++ G P + VLI K G E+ ++ + G
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILL 164
K ++ G KQ ++E Y L + ++G S TY++L+
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 136/254 (53%), Gaps = 2/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L E+ ++G +P+ TYT+++G V +G++ A R+ +EM++ G + T LM
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C LG + A + D++ + + PN VT+ V+I K +A +++ M P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ + + ++ A L + +++ + + L+ WLC G+V EA L
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+ KG PSL++YN +I G C KG + +A + + + ++ KPNA TY LI+G K
Sbjct: 390 DE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 241 GDFERAFGVFEQMM 254
G+ + V E+M+
Sbjct: 449 GNVKEGVRVLEEML 462
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L+EM GW P TYT ++ + G EA + D+M + + N + +++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C A +FDE++E P++ +ID + +++A L+ +M P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
++ L+ K+ + A +L DE + I S++TYN L++ +C G++ EA L D
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M + P+ +YN +I G + G + + V+ +L+ G PN T+ L +G K G
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 242 DFERAFGV 249
E A +
Sbjct: 485 KEEDAMKI 492
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSV--IGTCV------RQGNVVEALRLKDEMVNSGVPVN 52
+A + MR IP G SV + T + ++ ++V A+ K+ + G+ N
Sbjct: 132 LAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKESFGITPN 190
Query: 53 IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN 112
I L+K C DI SA K+ DEI G+ PN VT++ ++ G ME A +
Sbjct: 191 IFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLE 250
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLG 171
M G P L+ G+ K A ++D+ ++ I + VTY +++ LC
Sbjct: 251 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
K EA N+ D+M+ + P +I C +D+A + ++LK P+ +
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 232 PLIDGFFKKGDFERAFGVFEQ 252
LI K+G A +F++
Sbjct: 371 TLIHWLCKEGRVTEARKLFDE 391
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
G+ PN T ++L+ K +E A+++ + + MG+ P + +L G+ + +E+A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 143 YRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
R+L+E ++ G TY +L+ C LG+ EA ++D M + P+ V+Y +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
C++ +A ++ + +L++ P++ +ID + + A G++ +M+ N
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
AC L ++M +P +++I ++G V EA +L DE +P +++ +L+
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIA 408
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G++ A +L+D++ E PNA T++VLI+ SK G++++ + M +G P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCG 169
L +G QK E+A +++ AV +G ++ + L G
Sbjct: 469 NKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKFAG 516
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 41/246 (16%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV----NIIVATSLMKGHCLLGD 68
G+ + TY S++ R L ++ NS P+ N+ + L++ + L G
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI--DLLRNYGLAGR 135
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY-NRMKLMGIQPTVFIVK 127
S++++F I + GV + + + L++ + + ++ N + GI P +F
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF--- 192
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
T N+L+ LC + A +LD++ S G
Sbjct: 193 -------------------------------TCNLLVKALCKKNDIESAYKVLDEIPSMG 221
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ P+LV+Y I+ G+ +G M+ A V+ +L +G P+A TYT L+DG+ K G F A
Sbjct: 222 LVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAA 281
Query: 248 GVFEQM 253
V + M
Sbjct: 282 TVMDDM 287
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
S G+TP++ + N ++ C+K ++ AY V++ I GL PN +TYT ++ G+ +GD E
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
A V E+M+ T +T L
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVL 267
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P T+ ++I CV++G V EA +EM+ + +I+ + L+ G C+ ++ A ++
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F +V G P+ VT+S+LI+ K +E +L+ M G+ L++G+ +
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
L A + V G+ +++TYN+LL LC GK+ +A +L M G+ +V+
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YN II G C+ G + DA+ + + +GL P+ TYT ++ G +KKG A +F +M
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 5/271 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L +M LG PS T+ S++ R V +AL + D+MV G N+++ +++
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMG 118
G C +++AL L + + + G+ P+ VT++ LI CSS G A + + M
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS--GRWSDATRMVSCMTKRE 251
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
I P VF L+ K+ + A +E + + +VTY++L+ LC ++ EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ M+SKG P +V+Y+ +I G+C+ ++ + + ++G+ N +TYT LI G+
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ G A +F +M+ + I + L
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 1/266 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M +G+ P+ Y ++I + V AL L + M G+ +++ SL+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A ++ + + + P+ TF+ LID K G + +A E Y M + P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G + L+ A + V G VVTY+IL++ C KV L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +GV + V+Y +I G+CR G ++ A + R++ G+ PN +TY L+ G
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 241 GDFERAFGVFEQMMAANANLQITQFT 266
G E+A + M + I +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYN 435
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTC-VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
L ++M+ LG IP +++ C R + AL +M+ G +I+ SL+ G
Sbjct: 103 LWEQMQMLG-IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C + AL +FD++V G PN V ++ +ID K ++ A +L NRM+ GI P V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G +A R++ + I V T+N L+ G+V EA ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M+ + + P +V+Y+ +I G C +D+A + ++ KG P+ +TY+ LI+G+ K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 243 FERAFGVFEQM 253
E +F +M
Sbjct: 342 VEHGMKLFCEM 352
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+PS ++ ++ + + L ++M G+P N+ L+ C ++ AL
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++++ G P+ VTF L++ + + A ++++M MG +P V I ++ G
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 135 KQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K ++NA LL+ + GI VVTYN L+S LC G+ +A ++ M + + P +
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++N +I ++G + +A ++++ L P+ +TY+ LI G + A +F M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 254 MAANANLQITQFTPL 268
++ + ++ L
Sbjct: 318 VSKGCFPDVVTYSIL 332
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y ++ +R + ++L L MV +I + L+ + + + L++++
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G+ N T ++L++C + + A +M +G +P++ LL GF + + +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 141 NAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
+A + D+ V G +VV YN ++ LC +V A +LL++M G+ P +V+YN +I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C G DA +++ + K+ + P+ T+ LID K+G A +E+M+ + +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 260 LQITQFTPL 268
I ++ L
Sbjct: 289 PDIVTYSLL 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M + G P TY+ +I + V ++L EM GV N + T L++G+C G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+N A ++F +V GV PN +T++VL+ G +EKA
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL-------------------V 417
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+L QK M A +VTYNI++ +C G+V +A ++ + +G+
Sbjct: 418 ILADMQKNGM---------------DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
P + +Y ++LG +KG +A ++ ++ + G+ PN
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL EM G + + TYT +I R G + A + MV GV NII L+ G
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G I AL + ++ + G+ + VT++++I K G + A+++Y + G+ P +
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
+ ++ G K+ + A L + E GI
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M +G P T+ ++I +G V+EA L ++MV G+ ++++ +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +GD SAL L ++ E + P+ V +S +ID K G A L++ M GI P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
VF ++ GF +A RLL + +E I V+T+N L+S GK+ EA L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDA----------------------------- 211
D+M+ + + P V+YN +I G C+ DDA
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 212 --YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
++ I ++GL N TY LI GF + + A +F++M++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL +M P Y+++I + G+ +A L EM+ G+ N+ ++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A +L +++E + P+ +TF+ LI S K G + +A +L + M I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
++ GF K N ++A + D VVT+N ++ C +V E LL
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
++ +G+ + +YN +I G C ++ A + ++ G+ P+ +T L+ GF +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 242 DFERAFGVFEQMMAANANLQITQF 265
E A +FE + + +L +
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAY 540
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 32/286 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL++M P T+ ++I V++G + EA +L DEM++ + + + S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 62 GHCLLGDINSALKLFD-------------------------------EIVEAGVAPNAVT 90
G C + A +FD EI G+ N T
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
++ LI ++ ++ A +L+ M G+ P LL GF + LE A L +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
I V YNI++ +C KV EA +L + GV P + +YN +I G C K +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
DA + +++ G +P+ TY LI G K G+ +++ + +M +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG 83
VIG VR A+ L +M +P+NI L+K C ++ +L F ++ + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 84 VAPNAVTFSVLI----------DCSSKIGSMEK-----AFELYNRMKLMGIQPTVFIVKF 128
P+ VTF+ L+ + + G M + A L+++M +G+ P V
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+ G + + A L+++ V G+ VVTY +++ +C +G A NLL KM
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ P +V Y+ II C+ G DA + + +L+KG+ PN TY +IDGF G + A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 248 GVFEQMMAANANLQITQFTPL 268
+ M+ N + F L
Sbjct: 352 RLLRDMIEREINPDVLTFNAL 372
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K M L P T+ ++I R V E ++L E+ G+ N +L+ G C +
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
++N+A LF E++ GV P+ +T ++L+ + +E+A EL+ +++ I
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ G K + ++ A+ L HG+ V TYN+++S CG + +A L KM
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
G P +YN +I G + G +D + +++ + G +A T
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 16/223 (7%)
Query: 48 GVPVNIIVATSLMKGHCLLGDINSALKLF---------------DEIVEAGVAPNAVTFS 92
G +++ +L+ G CL I+ AL LF D++VE G+ P +TF+
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 93 VLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE- 151
LI+ G + +A L N+M G+ V ++ G K ++A LL + E
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 152 HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
H VV Y+ ++ LC G +A L +M+ KG+ P++ +YN +I G C G DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
++ ++++ + P+ LT+ LI K+G A + ++M+
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L G ++ A+ FD +V + AV + +I ++ + A LY +M++
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKV---- 173
I ++ L+K F + L + + + G VVT+N LL LC ++
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 174 -----------VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
+EA L D+M+ G+TP ++++N +I G C +G + +A +++N+++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
L + +TY +++G K GD + A + +M
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 1/259 (0%)
Query: 11 ALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDIN 70
+ G +P TY S+I ++G V AL + +M N G N+ T L+ G C LG I+
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 71 SALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLL 130
A + +E+ G+ PN V F+ LI K + +A E++ M G +P V+ L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 131 KGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
G + + +++A LL + + G +A+ VTYN L++ G++ EA L+++M+ +G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGV 249
++YN +I G CR G +D A S+ ++L+ G P+ ++ LI+G + G E A
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 250 FEQMMAANANLQITQFTPL 268
++M+ + I F L
Sbjct: 622 QKEMVLRGSTPDIVTFNSL 640
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 6/269 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL++M G +P+ Y ++I + + V EAL+L +EM G + ++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C IN A K+ + ++ G AP+ +T+ L++ KIG ++ A +L+ R+ +P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KP 351
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAV-EHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
+ I L+ GF L++A +L + V +GI V TYN L+ G V A +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M +KG P++ SY ++ G C+ G +D+AY+V+N + GLKPN + + LI F K
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A +F +M + F L
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM A G P+ + +I ++ + EA+ + EM G ++ SL+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + +I AL L +++ GV N VT++ LI+ + G +++A +L N M G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L+KG + ++ A L ++ + G A S ++ NIL++ LC G V EA
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ +G TP +V++N +I G CR G ++D ++ ++ +G+ P+ +T+ L+ K
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 241 G 241
G
Sbjct: 683 G 683
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL++M + G + + TY ++I +R+G + EA +L +EMV G P++ I SL+K
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+++ A LF++++ G AP+ ++ ++LI+ + G +E+A E M L G P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G + +E+ + + GI VT+N L+SWLC G V +AC LL
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 181 DKMMSKGVTPSLVSYN 196
D+ + G P+ +++
Sbjct: 693 DEGIEDGFVPNHRTWS 708
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 34/286 (11%)
Query: 4 KLLKEMRAL-GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
+L+ EMR + P+ +Y V+ V A + +M++ +P + +MK
Sbjct: 167 RLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C + +I+SAL L ++ + G PN+V + LI SK + +A +L M LMG P
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL- 180
++ G K + + A ++++ + G A +TY L++ LC +G+V A +L
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 181 -------------------------------DKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
D + S G+ P + +YN +I G+ ++G +
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
A V++ + KG KPN +YT L+DGF K G + A+ V +M A
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +EM G P T+ S+I + AL L +M++ GV N + +L+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+I A KL +E+V G + +T++ LI + G ++KA L+ +M G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G + M+E A E V G +VT+N L++ LC G++ + +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
K+ ++G+ P V++N ++ C+ G + DA +++ ++ G PN T++ L+ +
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Query: 241 GDFER 245
+R
Sbjct: 718 ETLDR 722
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 2/254 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
M L ++M+ LG+ P+ +T++I ++G V AL L DEM +S + +I++ +
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G ++ A K F EI G+ P+ VT++ +I K +++A E++ ++
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P + ++ G+ + AY LL+ G I SV+ YN +L+ L +GKV EA +
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
++ M K P+L +YN +I CR G +D A+ + + + K GL PN T ++D K
Sbjct: 366 FEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 240 KGDFERAFGVFEQM 253
+ A +FE+M
Sbjct: 425 SQKLDEACAMFEEM 438
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
AC + +EM P E T+ S+I + G V +A ++ ++M++S N IV TSL+K
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G K++ +++ +P+ + +DC K G EK ++ +K P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
L+ G K Y L E G + YNI++ C GKV +A LL
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M +KG P++V+Y +I G + +D+AY + K ++ N + Y+ LIDGF K
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 241 GDFERAFGVFEQMM 254
G + A+ + E++M
Sbjct: 671 GRIDEAYLILEELM 684
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 4/259 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSL 59
MA K E+ A G P E TYTS+IG + + EA+ + + + N VP T +
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
M G+ G + A L + G P+ + ++ ++ C K+G +++A +++ MK
Sbjct: 316 M-GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDA 373
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
P + L+ + L+ A+ L D + G+ +V T NI++ LC K+ EAC
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+ ++M K TP +++ +I G + G +DDAY V ++L + N++ YT LI FF
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 239 KKGDFERAFGVFEQMMAAN 257
G E +++ M+ N
Sbjct: 494 NHGRKEDGHKIYKDMINQN 512
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +E++A ++P +Y+ +I ++ G E L M G ++ ++ G C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G +N A +L +E+ G P VT+ +ID +KI +++A+ L+ K I+ V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
I L+ GF K ++ AY +L+E ++ G+ ++ T+N LL L ++ EA M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
TP+ V+Y +I G C+ + A+ + K+G+KP+ ++YT +I G K G+
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 244 ERAFGVFEQMMA 255
A +F++ A
Sbjct: 779 AEAGALFDRFKA 790
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 1/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL+EM+ G+ P+ TY SVI + + EA L +E + + +N+++ +SL+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +G I+ A + +E+++ G+ PN T++ L+D K + +A + MK + P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ G K A+ E + G+ S ++Y ++S L G + EA L
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+ + G P YN +I G DA+S+ ++GL + T L+D K
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 241 GDFERA 246
E+A
Sbjct: 846 DCLEQA 851
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L+ G G N +LF + E G + ++++ID K G + KA++L MK G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC 177
+PTV ++ G K + L+ AY L +EA I +VV Y+ L+ +G++ EA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+L+++M KG+TP+L ++N ++ + +++A + + PN +TY LI+G
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
K F +AF +++M +T +
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 37/303 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ +EM+ P+ TY +I R G + A L+D M +G+ N+ ++
Sbjct: 362 ALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ A +F+E+ P+ +TF LID K+G ++ A+++Y +M +
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG---------------------------- 153
+ L+K F E+ +++ + +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 154 --------IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
+ +Y+IL+ L G E L M +G +YN +I G C+
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
G ++ AY ++ + KG +P +TY +IDG K + A+ +FE+ + L + +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 266 TPL 268
+ L
Sbjct: 661 SSL 663
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L M+ G + Y VI + G V +A +L +EM G ++ S++ G
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ ++ A LF+E + N V +S LID K+G +++A+ + + G+ P +
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
+ LL K + A E + VTY IL++ LC + K +A +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M +G+ PS +SY +I G + G + +A ++ +R G P++ Y +I+G
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 243 FERAFGVFEQ 252
AF +FE+
Sbjct: 813 AMDAFSLFEE 822
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRL-KDEMVNSGVPVNIIVATSLM 60
A +LL M G P TY ++I + + +A + KD S +++ TS++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+C G + A L D+++ G+ P VTF+VL+D +K G M A E+ +M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V L+ G+ + + +RL +E G+ + TY+IL++ LC ++++A L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L ++ SK + P YN +I G C+ G +++A ++ + KK KP+ +T+T LI G
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 240 KGDFERAFGVFEQMMA 255
KG A +F +M+A
Sbjct: 465 KGRMFEAVSIFHKMVA 480
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TYTS+I + G + EA L D+M+ G+ + L+ G+ G++ +A ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+++ G P+ VTF+ LID ++G + + F L+ M G+ P F L+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 136 QNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+N L A LL + A + I YN ++ C GKV EA ++++M K P ++
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ +I+GHC KG M +A S+ ++++ G P+ +T + L+ K G + A+
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 54 IVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
+V SL+ L + A+KLFDE + + TF++LI +G EKA EL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLG 171
M G +P + L++GF K N L A + + + S VVTY ++S C G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
K+ EA +LLD M+ G+ P+ V++N ++ G+ + G M A + +++ G P+ +T+T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 232 PLIDGFFKKGDFERAFGVFEQMMA 255
LIDG+ + G + F ++E+M A
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNA 375
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 23 SVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA 82
S++ T V+ V +A++L DE + + L++G C +G AL+L +
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI-QPTVFIVKFLLKGFQKQNMLEN 141
G P+ VT++ LI K + KA E++ +K + P V ++ G+ K +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 142 AYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A LLD+ + GI + VT+N+L+ G+++ A + KM+S G P +V++ +I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G+CR G + + + + +G+ PNA TY+ LI+ + +A + Q+ + +
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 261 QITQFTPL 268
Q + P+
Sbjct: 416 QPFMYNPV 423
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
T+++L K G + A +++ MK G+ P ++ FL+ F ++ L A LL ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 150 VE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
E G VV N LL+ L L +V +A L D+ + ++N +I G C G
Sbjct: 165 FEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+ A ++ + G +P+ +TY LI GF K + +A +F+ + + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRL-KDEMVNSGVPVNIIVATSLM 60
A +LL M G P TY ++I + + +A + KD S +++ TS++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+C G + A L D+++ G+ P VTF+VL+D +K G M A E+ +M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V L+ G+ + + +RL +E G+ + TY+IL++ LC ++++A L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L ++ SK + P YN +I G C+ G +++A ++ + KK KP+ +T+T LI G
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 240 KGDFERAFGVFEQMMA 255
KG A +F +M+A
Sbjct: 465 KGRMFEAVSIFHKMVA 480
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TYTS+I + G + EA L D+M+ G+ + L+ G+ G++ +A ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+++ G P+ VTF+ LID ++G + + F L+ M G+ P F L+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 136 QNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+N L A LL + A + I YN ++ C GKV EA ++++M K P ++
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ +I+GHC KG M +A S+ ++++ G P+ +T + L+ K G + A+
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
Query: 54 IVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
+V SL+ L + A+KLFDE + + TF++LI +G EKA EL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLG 171
M G +P + L++GF K N L A + + + S VVTY ++S C G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
K+ EA +LLD M+ G+ P+ V++N ++ G+ + G M A + +++ G P+ +T+T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 232 PLIDGFFKKGDFERAFGVFEQMMA 255
LIDG+ + G + F ++E+M A
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNA 375
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 23 SVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA 82
S++ T V+ V +A++L DE + + L++G C +G AL+L +
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI-QPTVFIVKFLLKGFQKQNMLEN 141
G P+ VT++ LI K + KA E++ +K + P V ++ G+ K +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 142 AYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A LLD+ + GI + VT+N+L+ G+++ A + KM+S G P +V++ +I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G+CR G + + + + +G+ PNA TY+ LI+ + +A + Q+ + +
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 261 QITQFTPL 268
Q + P+
Sbjct: 416 QPFMYNPV 423
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
T+++L K G + A +++ MK G+ P ++ FL+ F ++ L A LL ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 150 VE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
E G VV N LL+ L L +V +A L D+ + ++N +I G C G
Sbjct: 165 FEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+ A ++ + G +P+ +TY LI GF K + +A +F+ + + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ EM G +P +Y ++ C R G + EA R M+ G + T ++ C
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G +N A+ F ++++ G PN + F+ LID K GS+++AFE+ M G +P V+
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G K+ E A+RL + V +V TY ++ C K+ A L +
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M +G+ P++ +Y +I GHC+ G AY +MN + +G PN TY ID KK
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 243 FERAFGVFEQMMA 255
A+ + + +
Sbjct: 444 APEAYELLNKAFS 456
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 2/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + L M G+IP T T ++ G V A+ +M++ G N+I TSL+
Sbjct: 236 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQ 120
G C G I A ++ +E+V G PN T + LID K G EKAF L+ ++ + +
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V ++ G+ K++ L A L E G+ +V TY L++ C G A L
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
++ M +G P++ +YN I C+K +AY ++N+ GL+ + +TYT LI K
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 240 KGDFERAFGVFEQM 253
+ D +A F +M
Sbjct: 476 QNDINQALAFFCRM 489
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LK +R+ + P+ TYTS+IG ++ + A L M G+ N+ T+L+ GHC
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G A +L + + + G PN T++ ID K +A+EL N+ G++
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L++ KQN + A + G A + NIL++ C K+ E+ L +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+S G+ P+ +Y +I +C++G +D A + + + G P++ TY LI G KK
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 244 ERAFGVFEQMM 254
+ A ++E M+
Sbjct: 585 DEACKLYEAMI 595
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
++M LG+ P+ +TS+I ++G++ +A + +EMV +G N+ T+L+ G C
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 66 LGDINSALKLFDEIVEAGV-APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G A +LF ++V + PN T++ +I K + +A L++RMK G+ P V
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ G K AY L++ + G + ++ TYN + LC + EA LL+K
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 184 MSKGVTPSLVSY-----------------------------------NHIILGHCRKGCM 208
S G+ V+Y N +I CR+ M
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 514
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ + ++ GL P TYT +I + K+GD + A F M
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L M+ G P+ TYT++I + G+ A L + M + G NI + + C
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
A +L ++ G+ + VT+++LI K + +A + RM G + +
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ F +Q ++ + RL V G I + TY ++S C G + A M
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
G P +Y +I G C+K +D+A + ++ +GL P +T L + K+ D
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDS 619
Query: 244 ERAFGVFEQM 253
A + E +
Sbjct: 620 ANAMILLEPL 629
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 32 GNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTF 91
G + EA+ + +M N G+ + I +++ LG I A +FDE+ GV P++ ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 92 SVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE 151
KLM I G + ++ A R L ++
Sbjct: 221 -----------------------KLMVI------------GCFRDGKIQEADRWLTGMIQ 245
Query: 152 HG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
G I T ++L+ LC G V A KM+ G P+L+++ +I G C+KG +
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
A+ ++ +++ G KPN T+T LIDG K+G E+AF +F +++ ++
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L+ M G++P+ TY + I + ++ EA L ++ + G+ + + T L++
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C DIN AL F + + G + ++LI + M+++ L+ + +G+ P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
T ++ + K+ ++ A + HG + TY L+S LC V EAC L
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
+ M+ +G++P V+ + +C++ +A ++ + KK
Sbjct: 592 EAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC 177
+Q +++ +L+ F + L A ++ + G+ S +T N +L LG + A
Sbjct: 143 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAE 202
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGH----------------------------------- 202
N+ D+M +GV P SY +++G
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
C G ++ A +++ G KPN + +T LIDG KKG ++AF + E+M+
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 314
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L +M LG+ P T+TS+I + EA+ + ++MV G+ ++++ T+++
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G +N AL LFD++ G+ P+ V ++ L++ G A L M I+
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V L+ F K+ +A L +E + IA ++ TY L++ C G V EA +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
M +KG P +V+Y +I G C+ +DDA + + +KGL N +TYT LI GF +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G A VF M++ I + L
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +M +G P YT++I + + G+V AL L D+M N G+ ++++ TSL+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G A L + + + P+ +TF+ LID K G A ELYN M M I P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+F L+ GF + ++ A ++ G VV Y L++ C KV +A +
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M KG+T + ++Y +I G + G + A V + ++ +G+ PN TY L+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 241 GDFERAFGVFEQM 253
G ++A +FE M
Sbjct: 401 GKVKKALMIFEDM 413
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM + P+ TYTS+I +G V EA ++ M G +++ TSL+
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C ++ A+K+F E+ + G+ N +T++ LI ++G A E+++ M G+ P
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEH---GIA-SVVTYNILLSWLCGLGKVVEAC 177
+ LL ++ A + ++ + G+A ++ TYN+LL LC GK+ +A
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ + M + + +++Y II G C+ G + +A ++ + KG+KPN +TYT +I G
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Query: 238 FKKGDFERAFGVFEQM 253
F++G A +F +M
Sbjct: 506 FREGLKHEAHVLFRKM 521
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
W+ + Y ++ + EAL L MV S +II T L+ + + +
Sbjct: 33 WVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVI 92
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
L D + GV+ + T ++L++C + A +M +G +P + L+ GF
Sbjct: 93 NLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF 152
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
N +E A ++++ VE GI VV Y ++ LC G V A +L D+M + G+ P +
Sbjct: 153 CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
V Y ++ G C G DA S++ + K+ +KP+ +T+ LID F K+G F A ++ +
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 253 MMAANANLQITQFTPL 268
M+ + I +T L
Sbjct: 273 MIRMSIAPNIFTYTSL 288
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L M +PS +T ++ + + L D + GV ++ LM
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C A ++++ G P+ VTF+ LI+ ME+A + N+M MGI+P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V + ++ K + A L D+ +GI VV Y L++ LC G+ +A +LL
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M + + P ++++N +I ++G DA + N +++ + PN TYT LI+GF +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G + A +F M + +T L
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSL 323
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M G P YTS+I + V +A+++ EM G+ N I T+L++G +G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA---FELYNRMKLMGIQPTVFI 125
N A ++F +V GV PN T++VL+ C G ++KA FE + ++ G+ P ++
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
LL G LE A + ++ + + ++TY I++ +C GKV A NL +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
SKGV P++V+Y +I G R+G +A+ + ++ + G+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQG-NVVEALRLKDEMVNSGVPVNIIVATSLM 60
A + M+ G P+ TY +VI C + G + + DEM +GV + I SL+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G +A LFDE+ + + +++ L+D K G M+ AFE+ +M + I
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V ++ GF K + A L E GIA V+YN LLS +G+ EA ++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L +M S G+ +V+YN ++ G+ ++G D+ V + ++ + PN LTY+ LIDG+ K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G ++ A +F + +A + ++ L
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
K EM+ G P T+ S++ C R G A L DEM N + ++ +L+
Sbjct: 324 AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C G ++ A ++ ++ + PN V++S +ID +K G ++A L+ M+ +GI
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
LL + K E A +L E GI VVTYN LL GK E +
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + V P+L++Y+ +I G+ + G +A + GL+ + + Y+ LID K G
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 242 DFERAFGVFEQM 253
A + ++M
Sbjct: 564 LVGSAVSLIDEM 575
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A ++L +M +P+ +Y++VI + G EAL L EM G+ ++ + +L+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ +G AL + E+ G+ + VT++ L+ K G ++ +++ MK +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ G+ K + + A + E G+ A VV Y+ L+ LC G V A +L
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMN 216
+D+M +G++P++V+YN II R MD + N
Sbjct: 572 IDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
+++I T R G V A R+ + G + ++L+ + G A+ +F+ + E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 82 AGVAPNAVTFSVLIDCSSKIGSME--KAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
G+ PN VT++ +ID K G ME + + ++ M+ G+QP LL + +
Sbjct: 297 YGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
E A L DE I V +YN LL +C G++ A +L +M K + P++VSY+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
I G + G D+A ++ + G+ + ++Y L+ + K G E A + +M +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 259 NLQITQFTPL 268
+ + L
Sbjct: 476 KKDVVTYNAL 485
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 9 MRALGWIPSEGTYTSVIGTCV---------RQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+RA W + Y S++ V ++G V A + + + G +++ TSL
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS-MEKAFELYNRMKLMG 118
+ G A+ +F ++ E G P +T++V+++ K+G+ K L +MK G
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC 177
I P + L+ ++ ++ + A ++ +E G + VTYN LL + EA
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+L++M+ G +PS+V+YN +I + R G +D+A + N++ +KG KP+ TYT L+ GF
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQF 265
+ G E A +FE+M A I F
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTF 422
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L EM G+ PS TY S+I R G + EA+ LK++M G ++ T+L+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G + SA+ +F+E+ AG PN TF+ I G + ++++ + + G+ P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL F + M + E G + T+N L+S G +A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+M+ GVTP L +YN ++ R G + + V+ + KPN LTY L+ +
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +EM+A G+ + TY +++ + EA+++ +EMV +G +I+ SL+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G ++ A++L +++ E G P+ T++ L+ + G +E A ++ M+ G +P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ +K + + ++ DE G++ +VT+N LL+ G E +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M G P ++N +I + R G + A +V R+L G+ P+ TY ++ +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 241 GDFERAFGVFEQM 253
G +E++ V +M
Sbjct: 538 GMWEQSEKVLAEM 550
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG-DINSALKLFDE 78
+YTS+I G EA+ + +M G +I ++ +G N L ++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ G+AP+A T++ LI C + ++A +++ MK G LL + K +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 139 LENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ A ++L+E V +G + S+VTYN L+S G + EA L ++M KG P + +Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ G R G ++ A S+ + G KPN T+ I + +G F +F+++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + M G P TY +V+ R G ++ ++ EM + N + SL+
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ +I L +E+ + P AV L+ SK + +A ++ +K G P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILL---SWLCGLGKVVEAC 177
+ + ++ + ++ M+ A +LD E G S+ TYN L+ S GK E
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE-- 685
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+L ++++KG+ P ++SYN +I +CR M DA + + + G+ P+ +TY I +
Sbjct: 686 -ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 238 FKKGDFERAFGVFEQMM 254
FE A GV M+
Sbjct: 745 AADSMFEEAIGVVRYMI 761
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 4/258 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEAL-RLKDEMVNSGVPVNIIVATSLM 60
A + K+M G P+ TY ++ + G + L ++M + G+ + +L+
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 61 KGHCLLGDINS-ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
C G ++ A ++F+E+ AG + + VT++ L+D K ++A ++ N M L G
Sbjct: 287 TC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
P++ L+ + + ML+ A L ++ E G V TY LLS GKV A +
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+ ++M + G P++ ++N I + +G + + + I GL P+ +T+ L+ F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 239 KKGDFERAFGVFEQMMAA 256
+ G GVF++M A
Sbjct: 466 QNGMDSEVSGVFKEMKRA 483
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGV--PVNIIVAT-SLM 60
K+L EM P+E TY S++ G + + E V SGV P +++ T L+
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C L + A + F E+ E G +P+ T + ++ + + KA + + MK G
Sbjct: 604 CSKCDL--LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P++ L+ + + +L E + GI +++YN ++ C ++ +A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M + G+ P +++YN I + ++A V+ ++K G +PN TY ++DG+ K
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 36/286 (12%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ E+ G P T+ +++ + G E + EM +G +L+ +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA---------------- 107
G A+ ++ +++AGV P+ T++ ++ ++ G E++
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 108 ------FELYNRMKLMG-------------IQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
Y K +G I+P ++K L+ K ++L A R E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
E G + + T N ++S V +A +LD M +G TPS+ +YN ++ H R
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ ++ IL KG+KP+ ++Y +I + + A +F +M
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 28 CVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
C + + EA R E+ G +I S++ + + A + D + E G P+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
T++ L+ S+ K+ E+ + GI+P + ++ + + + +A R+
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 148 EAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
E GI V+TYN + EA ++ M+ G P+ +YN I+ G+C+
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 207 CMDDA 211
D+A
Sbjct: 784 RKDEA 788
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 66/141 (46%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L M+ G+ PS TY S++ R + ++ + E++ G+ +II +++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C + A ++F E+ +G+ P+ +T++ I + E+A + M G +P
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 122 TVFIVKFLLKGFQKQNMLENA 142
++ G+ K N + A
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEA 788
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 137/253 (54%), Gaps = 3/253 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM+ G S T+ +I + G + EA+ EM G+ +++V TSL++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+++ LFDE++E G +P A+T++ LI K+G +++A E++ M G++P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V+ L+ G + A +LL+ +E + VTYNI+++ LC G V +A ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG--LKPNALTYTPLIDGFF 238
+ M + P ++YN ++ G C KG +D+A ++ +LK P+ ++Y LI G
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 239 KKGDFERAFGVFE 251
K+ +A +++
Sbjct: 436 KENRLHQALDIYD 448
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL+EMR +P +Y +VI + +AL L +EM SG +++ L+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G ++ A+ E+ G+ + V ++ LI G +++ L++ + G P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L++GF K L+ A + + +E G+ +V TY L+ LCG+GK EA LL
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+ K P+ V+YN II C+ G + DA ++ + K+ +P+ +TY L+ G K
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 241 GDFERA 246
GD + A
Sbjct: 401 GDLDEA 406
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEA-----LRLKDEMVNSGVPVNIIVA 56
A ++++ M+ P TY ++G +G++ EA L LKD +S ++I
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD---SSYTDPDVISY 427
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
+L+ G C ++ AL ++D +VE A + VT ++L++ + K G + KA EL+ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVE 175
I ++ GF K ML A LL + V SV YN LLS LC G + +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A L ++M P +VS+N +I G + G + A S++ + + GL P+ TY+ LI+
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 236 GFFKKGDFERAFGVFEQMMAA 256
F K G + A F++M+ +
Sbjct: 608 RFLKLGYLDEAISFFDKMVDS 628
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
+++ VR N A +M+ + +N + + L++ + + A + +++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
G A N ++L+ + KA L M+ + P VF +++GF + LE
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 142 AYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A L +E G + S+VT+ IL+ C GK+ EA L +M G+ LV Y +I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G C G +D ++ + +L++G P A+TY LI GF K G + A +FE M+
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 261 QITQFTPL 268
+ +T L
Sbjct: 316 NVYTYTGL 323
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P +Y ++I ++ + +AL + D +V + + L+ GD+N A++L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ +I ++ + N+ T++ +ID K G + A L +M++ +QP+VF LL K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 136 QNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ L+ A+RL +E ++ VV++NI++ G + A +LL M G++P L +
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
Y+ +I + G +D+A S ++++ G +P+A
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 132/337 (39%), Gaps = 73/337 (21%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L E+ G P TY ++I + G + EA + + M+ GV N+ T L+ G C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK--------- 115
+G AL+L + ++E PNAVT++++I+ K G + A E+ MK
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 116 ----LMG------------------------IQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
L+G P V L+ G K+N L A + D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 148 EAVEH-GIASVVTYNILLS--------------W---------------------LCGLG 171
VE G VT NILL+ W C G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
+ A LL KM + PS+ YN ++ C++G +D A+ + + + P+ +++
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 232 PLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+IDG K GD + A + M A + + ++ L
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQG--NVVEALRLKDEMVNSGVPVNIIVATSL 59
A +L K++ + + TYT++I + G NV + L K M S + ++ L
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK--MRVSELQPSVFDYNCL 535
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ C G ++ A +LF+E+ P+ V+F+++ID S K G ++ A L M G+
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-------SVVTYNILLSWLCGLGK 172
P +F L+ F K L+ A D+ V+ G SV+ Y I L +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 173 VVEACNLLDKMMSKGVTPSLVSY 195
+V+ D ++ K +T +++ Y
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDY 678
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + EM P G T++I + G +AL L + +N G V+ + +L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A ++ EI+ G + V+++ LI +++AF + M G++P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G N +E A + D+ +G + V TY++++ C + E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+MMSK V P+ V YNH+I +CR G + A + + KG+ PN+ TYT LI G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
E A +FE+M + +T L
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 2/223 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G PS+ T ++ + VR + D +V GV ++ + T+ + C G + A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+KLF ++ EAGVAPN VTF+ +ID G ++AF +M G++PT+ L+KG
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ + +AY +L E + G +V+ YN L+ G + +A + D M+SKG++ +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+YN +I G+C+ G D+A ++ +L G N ++T +I
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L EM G P TY+ +I V EA++ D+ +G+ ++ + ++ G C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ FDE++ V PN V ++ LI + G + A EL MK GI P
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+KG + +E A L +E G+ +V Y L+ LG++V+ LL +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
SK V P+ ++Y +I G+ R G + +A ++N + +KG+ P+++TY I G+ K+G
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Query: 244 ERAF-GVFEQMMAA 256
AF G E+ AA
Sbjct: 802 LEAFKGSDEENYAA 815
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL +M G P+ T+ +VI G EA K++MV G+ +I + L+K
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G I A + E+ + G PN + ++ LID + GS+ KA E+ + M G+
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-------IASVVT--------------- 159
T L+KG+ K +NA RLL E + G SV+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 160 --------------YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
L+S LC GK +A L + ++KG + N ++ G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G +D+A+ + IL +G + ++Y LI G K + AF ++M+
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA +L ++M+ G P+ TYTS+I V EA L +EM G+ N+ T+L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ LG + L E+ V PN +T++V+I ++ G++ +A L N M+ GI
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILL 164
P K + G+ KQ + A++ DE E+ A + +N L+
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDE--ENYAAIIEGWNKLI 824
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKL-FDEIVEAGVAPNAVTFSVLIDCSS-K 100
++N VPV + L + D ++L L FDE + ++ + + C+ K
Sbjct: 151 RLINGNVPV---LPCGLRDSRVAIADAMASLSLCFDEEIRRKMS----DLLIEVYCTQFK 203
Query: 101 IGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY 160
A +++ + G+ P+ LL + N + D + V +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLF 263
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII--LGHCRKGCMDDAYSVMNRI 218
++ C GKV EA L KM GV P++V++N +I LG C G D+A+ ++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC--GRYDEAFMFKEKM 321
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+++G++P +TY+ L+ G + A+ V ++M
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + EM P G T++I + G +AL L + +N G V+ + +L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A ++ EI+ G + V+++ LI +++AF + M G++P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G N +E A + D+ +G + V TY++++ C + E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+MMSK V P+ V YNH+I +CR G + A + + KG+ PN+ TYT LI G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
E A +FE+M + +T L
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 2/223 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G PS+ T ++ + VR + D +V GV ++ + T+ + C G + A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+KLF ++ EAGVAPN VTF+ +ID G ++AF +M G++PT+ L+KG
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ + +AY +L E + G +V+ YN L+ G + +A + D M+SKG++ +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+YN +I G+C+ G D+A ++ +L G N ++T +I
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L EM G P TY+ +I V EA++ D+ +G+ ++ + ++ G C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ FDE++ V PN V ++ LI + G + A EL MK GI P
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+KG + +E A L +E G+ +V Y L+ LG++V+ LL +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
SK V P+ ++Y +I G+ R G + +A ++N + +KG+ P+++TY I G+ K+G
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Query: 244 ERAF-GVFEQMMAA 256
AF G E+ AA
Sbjct: 802 LEAFKGSDEENYAA 815
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL +M G P+ T+ +VI G EA K++MV G+ +I + L+K
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G I A + E+ + G PN + ++ LID + GS+ KA E+ + M G+
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-------IASVVT--------------- 159
T L+KG+ K +NA RLL E + G SV+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 160 --------------YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
L+S LC GK +A L + ++KG + N ++ G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G +D+A+ + IL +G + ++Y LI G K + AF ++M+
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA +L ++M+ G P+ TYTS+I V EA L +EM G+ N+ T+L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ LG + L E+ V PN +T++V+I ++ G++ +A L N M+ GI
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILL 164
P K + G+ KQ + A++ DE E+ A + +N L+
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDE--ENYAAIIEGWNKLI 824
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKL-FDEIVEAGVAPNAVTFSVLIDCSS-K 100
++N VPV + L + D ++L L FDE + ++ + + C+ K
Sbjct: 151 RLINGNVPV---LPCGLRDSRVAIADAMASLSLCFDEEIRRKMS----DLLIEVYCTQFK 203
Query: 101 IGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY 160
A +++ + G+ P+ LL + N + D + V +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLF 263
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII--LGHCRKGCMDDAYSVMNRI 218
++ C GKV EA L KM GV P++V++N +I LG C G D+A+ ++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC--GRYDEAFMFKEKM 321
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+++G++P +TY+ L+ G + A+ V ++M
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 132/266 (49%), Gaps = 1/266 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++ +G+ P+ TYT++I + ++ A+ L ++M +G N++ +L+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G A L ++++ + PN +TF+ LID K+G + +A ELYN M M + P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
VF L+ G +L+ A ++ +G + V Y L+ C +V + +
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M KGV + ++Y +I G+C G D A V N++ + P+ TY L+DG
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 241 GDFERAFGVFEQMMAANANLQITQFT 266
G E+A +FE M ++ I +T
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYT 437
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L M + P TY S+I G + EA ++ M +G N ++ T+L+
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C + +K+F E+ + GV N +T++VLI +G + A E++N+M P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL G +E A + + + + ++VTY I++ +C LGKV +A +L
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
+ SKG+ P++++Y +I G CR+G + +A S+ ++ + G PN Y
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+PS +T ++ + + L ++M G+P + +M CL A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++++ G P+ VTF+ L++ +E A L++++ MG +P V L++
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K L +A L ++ +G +VVTYN L++ LC +G+ +A LL MM + + P+++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ +I + G + +A + N +++ + P+ TY LI+G G + A +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
N AL LF +V + P+ + F+ L+ +K+ + L+ +M+++GI P +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL---- 118
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
T NI++ +C + A L KMM G
Sbjct: 119 ------------------------------CTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P LV++ ++ G+C ++DA ++ ++IL G KPN +TYT LI K A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 248 GVFEQMMAANANLQITQFTPL 268
+F QM + + + L
Sbjct: 209 ELFNQMGTNGSRPNVVTYNAL 229
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A ++ +M + P TY ++ G V +AL + + M + +NI+ T ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G C LG + A LF + G+ PN +T++ +I + G + +A L+ +MK G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 121 PTVFIVK 127
P + K
Sbjct: 501 PNESVYK 507
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 127/236 (53%), Gaps = 1/236 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TY++ I T + G + AL+ M + N++ T L+ G+C GD+ A+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ E+ ++ N VT++ LID K G M++A E+Y+RM ++P + ++ GF +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ +NA + L + + G+ + Y +++S LCG GK+ EA +++ M + P +V
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+ ++ + + G M A ++ ++++++G +P+ + + +IDG K G A F
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
++ K L + + G+ P ++ SV+ + G V A + M G ++I SL+
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 61 KGHCLLGDINSALKLFDEIVEAG---VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
GHC GDI SA + + + + P+ V+F+ L + SK+ +++ F +Y + L
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLK 157
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEA 176
P V + F K L+ A + ++ +VVT+ L+ C G + A
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+L +M ++ ++V+Y +I G C+KG M A + +R+++ ++PN+L YT +IDG
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 237 FFKKGDFERAFGVFEQMMAANANLQITQF 265
FF++GD + A +M+ L IT +
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 124/241 (51%), Gaps = 8/241 (3%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ YT++I ++G+ A++ +M+N G+ ++I ++ G C G + A ++
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+++ ++ + P+ V F+ +++ K G M+ A +Y+++ G +P V + ++ G K
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 136 QNMLENA--YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
L A Y +++A + V Y +L+ LC G +E L K+ G+ P
Sbjct: 386 NGQLHEAIVYFCIEKAND------VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
Y I G C++G + DA+ + R++++GL + L YT LI G KG A VF++M
Sbjct: 440 MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Query: 254 M 254
+
Sbjct: 500 L 500
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + L +R +P T I + + +L+ +V+ G + S++
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG--- 118
C LG + A + + G P+ ++++ LID + G + A + ++
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
+P + L GF K ML+ + + ++ +VVTY+ + C G++ A
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
M ++P++V++ +I G+C+ G ++ A S+ + + + N +TYT LIDGF
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 239 KKGDFERAFGVFEQMM 254
KKG+ +RA ++ +M+
Sbjct: 245 KKGEMQRAEEMYSRMV 260
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
+LK +V G P+ +F+ ++ K+G ++ A ++ + M G +P V L+
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 132 GFQKQNMLENAYRLLDE-AVEHGI---ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
G + + +A +L+ HG +V++N L + + K+++ + +M K
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKC 158
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+P++V+Y+ I C+ G + A + + + L PN +T+T LIDG+ K GD E A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 248 GVFEQMMAANANLQITQFTPL 268
++++M +L + +T L
Sbjct: 219 SLYKEMRRVRMSLNVVTYTAL 239
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++++M +P +T+++ + G + A+ + +++ G +++ ++++
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G ++ A+ F +E N V ++VLID K G + L++++ G+ P
Sbjct: 382 GIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
F+ + G KQ L +A++L V+ G+ ++ Y L+ L G +VEA +
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
D+M++ G++P ++ +I + ++G M A ++ + ++GL
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 69/120 (57%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L ++ G +P + YTS I +QGN+V+A +LK MV G+ ++++ T+L+ G
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G + A ++FDE++ +G++P++ F +LI K G+M A +L M+ G+ V
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
N ++ T L+ C GD +LF +I EAG+ P+ ++ I K G++ AF+L
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGL 170
RM G+ + L+ G + ++ A ++ DE + GI+ +++L+
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
G + A +LL M +G+ ++ C K C
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAVSD------ADCSKQC 552
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y ++I + G+ + A L EM + G+ ++I + ++ C G A +L +++
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E + P+ VTFS LI+ K G + +A E+Y M GI PT ++ GF KQ+ L
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 141 NAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
+A R+LD + VVT++ L++ C +V + +M +G+ + V+Y +I
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C+ G +D A ++N ++ G+ PN +T+ ++ K + +AF + E + + +
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG-VPVNIIVATSLMKGHCLLG 67
M G P T+T+++ +G V++AL L D MV G P I+ G C +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTII-----NGLCKMG 55
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
D SAL L ++ E + + V ++ +ID K G A L+ M GI P V
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
++ F + +A +LL + +E I VVT++ L++ L GKV EA + M+ +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G+ P+ ++YN +I G C++ ++DA +++ + K P+ +T++ LI+G+ K +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 247 FGVFEQM 253
+F +M
Sbjct: 236 MEIFCEM 242
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ M G P Y ++I + G+ AL L +M + + ++++ +++
Sbjct: 29 ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G A LF E+ + G+ P+ +T+S +ID + G A +L M I P
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ K+ + A + + + GI + +TYN ++ C ++ +A +L
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M SK +P +V+++ +I G+C+ +D+ + + ++G+ N +TYT LI GF +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 241 GDFERAFGVFEQMMAA 256
GD + A + M+++
Sbjct: 265 GDLDAAQDLLNVMISS 280
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 44 MVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS 103
MV +G +++ T+LM G C G + AL L D +VE G P + +I+ K+G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 104 MEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNI 162
E A L ++M+ I+ V I ++ K +A L E + GI V+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
++ C G+ +A LL M+ + + P +V+++ +I ++G + +A + +L++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ P +TY +IDGF K+ A + + M + + + + F+ L
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G P TY+ +I + R G +A +L +M+ + +++ ++L+
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G ++ A +++ +++ G+ P +T++ +ID K + A + + M P
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ G+ K ++N + E GI A+ VTY L+ C +G + A +LL
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
+ M+S GV P+ +++ ++ C K + A++++ + K
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL EM G P +YT+VI + G V E L + PV + V +L+
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE----PV-VSVYNALIN 254
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C D A +L E+VE G++PN +++S LI+ G +E AF +M G P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGI-ASVVTYNILLSWLCGLGKVVEACNL 179
++ + L+KG + +A L ++ + G+ +VV YN L+ C G +V+A ++
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
M G +P++ +Y +I G ++G +D A + N++L G PN + YT +++ +
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR 434
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
F+ A + E M N + F
Sbjct: 435 HSKFKEAESLIEIMSKENCAPSVPTFN 461
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ ++ G PS Y V+ T + + + + +M G N+ L+K
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ A KL E+ G P+AV+++ +I ++G +++ EL R +P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EP 244
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V + L+ G K++ + A+ L+ E VE GI+ +V++Y+ L++ LC G++ A + L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFK 239
+M+ +G P++ + + ++ G +G DA + N++++ GL+PN + Y L+ GF
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G+ +A VF M + I + L
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 4/259 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + M +G P+ TY S+I ++G++ A+ + ++M+ SG N++V T++++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQ 120
C A L + + + AP+ TF+ I G ++ A +++ +M+
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + LL G K N +E AY L E G+ S TYN LL C G A L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL--KKGLKPNALTYTPLIDGF 237
+ KMM G +P ++ N IIL +C++G + A +++ + ++ +P+ ++YT +I G
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 238 FKKGDFERAFGVFEQMMAA 256
+ E + E+M++A
Sbjct: 611 CRSNCREDGVILLERMISA 629
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSL 59
+A L +M G P+ T +S++ C +G +AL L ++M+ G+ N++ +L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
++G C G+I A+ +F + E G +PN T+ LI+ +K GS++ A ++N+M G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLD-------------------------------- 147
P V + +++ + + + A L++
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 148 -----EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
E ++VTYN LL L ++ EA L ++ +GV S +YN ++ G
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
C G A ++ +++ G P+ +T +I + K+G ERA
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+ +I G V L +M G + + S++ + +G A+++F I
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G P+ ++ ++D ++ + +Y MK G +P VF LLK K N +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+ A +LL E G V+Y ++S +C +G V E L ++ P + YN +
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNAL 252
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
I G C++ A+ +M +++KG+ PN ++Y+ LI+ G E AF QM+
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 259 NLQITQFTPL 268
+ I + L
Sbjct: 313 HPNIYTLSSL 322
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 141/261 (54%), Gaps = 5/261 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM G P+E T+ ++ + G + L L + M + GV N ++ +++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL---MG 118
C G + + K+ +++ E G+ P+ VTF+ I K G + A +++ M+L +G
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 119 I-QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEA 176
+ +P +LKGF K +LE+A L + E+ +AS+ +YNI L L GK +EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+L +M KG+ PS+ SYN ++ G C+ G + DA +++ + + G+ P+A+TY L+ G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 237 FFKKGDFERAFGVFEQMMAAN 257
+ G + A + ++MM N
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNN 426
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS Y ++ +C+++ V L +MV G+ L++ C +++A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FDE+ E G PN TF +L+ K G +K EL N M+ G+ P I ++ F +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 136 QNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV----TP 190
+ +++ +++++ E G + +VT+N +S LC GKV++A + M P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+ ++YN ++ G C+ G ++DA ++ I + + +Y + G + G F A V
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 251 EQM 253
+QM
Sbjct: 350 KQM 352
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL+EM +P+ T ++ + + G + EA L +M G ++ + ++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 62 GHCLLGDINSALKLF-----------------------DEIVEAGVAPNAVTFSVLIDCS 98
G C G+++ A+++ D ++E P+ +T+S L++
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 99 SKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASV 157
K G +A L+ M +QP + F KQ + +A+R+L + + G S+
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNR 217
TYN L+ L ++ E L+D+M KG++P++ +YN I C ++DA ++++
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 218 ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+++K + PN ++ LI+ F K DF+ A VFE
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+LK+M G PS +Y ++ + G + +A + M +GV + + L+ G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+G +++A L E++ PNA T ++L+ K+G + +A EL +M G
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV------------------------VTY 160
++ G L+ A ++ HG A++ +TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
+ LL+ LC G+ EA NL +MM + + P V+YN I C++G + A+ V+ + K
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
KG + TY LI G K G+ ++M
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 24/291 (8%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L + +R + S +Y + VR G +EA + +M + G+ +I LM
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C LG ++ A + + GV P+AVT+ L+ +G ++ A L M P
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ LL K + A LL + E G VT NI++ LCG G++ +A ++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 181 -----------------------DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNR 217
D ++ P L++Y+ ++ G C+ G +A ++
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 218 ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
++ + L+P+++ Y I F K+G AF V + M + + + L
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM P Y I +QG + A R+ +M G ++ SL+
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + I L DE+ E G++PN T++ I + +E A L + M I P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
VF K+L++ F K + A + + AV Y+++ + L G++++A LL+
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
++ +G Y ++ C+K ++ A ++++++ +G + P+IDG K G
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Query: 242 DFERAFGVFEQMM 254
+ + A ++MM
Sbjct: 783 NKKEANSFADKMM 795
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 6/222 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++LK+M G S TY S+I + + E L DEM G+ NI + ++
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR-MKLMGIQ 120
C + A L DE+++ +APN +F LI+ K+ + A E++ + + G +
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 121 PTVFIVKF--LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
++ + F LL Q E +LD E G Y L+ LC ++ A
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELG---TFLYKDLVESLCKKDELEVASG 754
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
+L KM+ +G + +I G + G +A S +++++
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 130/255 (50%), Gaps = 1/255 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + +EMR P+ T V+ R G + + + L +M G + +L+
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GHC G ++SALKL + + ++G+ PN VTF+ LI + +++A +++ MK + +
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P L+ G+ +Q E A+R ++ V +GI ++TYN L+ LC K +A
Sbjct: 341 PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ ++ + + P+ +++ +I+G C + D + + +++ G PN T+ L+ F +
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 240 KGDFERAFGVFEQMM 254
DF+ A V +M+
Sbjct: 461 NEDFDGASQVLREMV 475
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 40 LKDEMVNSGV--PVNIIVA---------------TSLMKGHCLLGDINSALKLFDEIVEA 82
L+D +VN GV P + A SL K L +A F ++ +
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
G P + + + G ++ A Y M+ I P + + ++ G+ + L+
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 143 YRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
LL + G A+ V+YN L++ C G + A L + M G+ P++V++N +I G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
CR + +A V + + PN +TY LI+G+ ++GD E AF +E M+
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 262 ITQFTPL 268
I + L
Sbjct: 378 ILTYNAL 384
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +M+ G++P+ + + + + + QG V ALR EM + N +M
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G ++ ++L ++ G V+++ LI + G + A +L N M G+QP
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+VVT+N L+ C K+ EA +
Sbjct: 307 ----------------------------------NVVTFNTLIHGFCRAMKLQEASKVFG 332
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + V P+ V+YN +I G+ ++G + A+ ++ G++ + LTY LI G K+
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
+A +++ N + F+ L
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSAL 419
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 56 ATSLMKGHCLLGDINSALKLFDEIV----EAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
A S+++ + G ++ K+FD ++ E P F L + + A + +
Sbjct: 134 AESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTF 191
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGL 170
+MK G PTV + Q ++ A R E I+ + T N+++S C
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
GK+ + LL M G + VSYN +I GHC KG + A + N + K GL+PN +T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 231 TPLIDGFFKKGDFERAFGVFEQMMAAN 257
LI GF + + A VF +M A N
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVN 338
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ EM+A+ P+ TY ++I +QG+ A R ++MV +G+ +I+ +L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C A + E+ + + PN+ TFS LI + ++ FELY M G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
L+ F + + A ++L E V I
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 130/255 (50%), Gaps = 1/255 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + +EMR P+ T V+ R G + + + L +M G + +L+
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GHC G ++SALKL + + ++G+ PN VTF+ LI + +++A +++ MK + +
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P L+ G+ +Q E A+R ++ V +GI ++TYN L+ LC K +A
Sbjct: 341 PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQF 400
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ ++ + + P+ +++ +I+G C + D + + +++ G PN T+ L+ F +
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 240 KGDFERAFGVFEQMM 254
DF+ A V +M+
Sbjct: 461 NEDFDGASQVLREMV 475
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 40 LKDEMVNSGV--PVNIIVA---------------TSLMKGHCLLGDINSALKLFDEIVEA 82
L+D +VN GV P + A SL K L +A F ++ +
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
G P + + + G ++ A Y M+ I P + + ++ G+ + L+
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 143 YRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
LL + G A+ V+YN L++ C G + A L + M G+ P++V++N +I G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
CR + +A V + + PN +TY LI+G+ ++GD E AF +E M+
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 262 ITQFTPL 268
I + L
Sbjct: 378 ILTYNAL 384
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +M+ G++P+ + + + + + QG V ALR EM + N +M
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C G ++ ++L ++ G V+++ LI + G + A +L N M G+QP
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+VVT+N L+ C K+ EA +
Sbjct: 307 ----------------------------------NVVTFNTLIHGFCRAMKLQEASKVFG 332
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + V P+ V+YN +I G+ ++G + A+ ++ G++ + LTY LI G K+
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
+A +++ N + F+ L
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSAL 419
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 56 ATSLMKGHCLLGDINSALKLFDEIV----EAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
A S+++ + G ++ K+FD ++ E P F L + + A + +
Sbjct: 134 AESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTF 191
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGL 170
+MK G PTV + Q ++ A R E I+ + T N+++S C
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
GK+ + LL M G + VSYN +I GHC KG + A + N + K GL+PN +T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 231 TPLIDGFFKKGDFERAFGVFEQMMAAN 257
LI GF + + A VF +M A N
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVN 338
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ EM+A+ P+ TY ++I +QG+ A R ++MV +G+ +I+ +L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C A + E+ + + PN+ TFS LI + ++ FELY M G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
L+ F + + A ++L E V I
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L +M LG+ PS T+ S++ EA+ L D++V G N+++ +++
Sbjct: 132 LALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTII 191
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C G +N+AL + + + G+ P+ VT++ LI G+ + + + M MGI
Sbjct: 192 DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V L+ + K+ L A + +E ++ + ++VTYN L++ LC G + EA +
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L+ ++SKG P+ V+YN +I G+C+ +DD ++ + + G+ + TY L G+ +
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G F A V +M++ + + F L
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L + + LG ++T++I R + AL +M+ G +I+ SL+ G C
Sbjct: 101 LFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ A+ L D+IV G PN V ++ +ID + G + A ++ MK MGI+P V
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ + R+L + + GI+ V+T++ L+ G+++EA ++M
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ + V P++V+YN +I G C G +D+A V+N ++ KG PNA+TY LI+G+ K
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
++ ++L +M +G P T++++I ++G ++EA + +EM+ V NI+ SL+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C+ G ++ A K+ + +V G PNAVT++ LI+ K ++ ++ M G+
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
F L +G+ + A ++L V G+ + T+NILL LC GK+ +A
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L+ + +++YN II G C+ ++DA+ + + KG+ P+ +TY ++ G +
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 240 KGDFERAFGVFEQMMAANANLQI 262
K + A ++ +M + + I
Sbjct: 477 KRLWREAHELYRKMQKEDGLMPI 499
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 1/265 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ ++ LG+ P+ Y ++I + +G V AL + M G+ +++ SL+
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + ++ +++ G++P+ +TFS LID K G + +A + YN M + P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ G +L+ A ++L+ V G + VTYN L++ C +V + +L
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M GV +YN + G+C+ G A V+ R++ G+ P+ T+ L+DG
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 241 GDFERAFGVFEQMMAANANLQITQF 265
G +A E + + + I +
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITY 432
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+AL L +M S +I+ + L+ L + + LF + G++ + +F+ LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI- 154
DC + + A +M +G +P++ L+ GF N A L+D+ V G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
+VV YN ++ LC G+V A ++L M G+ P +V+YN +I G + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
++ +++ G+ P+ +T++ LID + K+G A + +M+ + N I + L
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 10 RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
R G+ TYT+++G R +L DEMV G N + L+ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
N A+ +F+++ EAG P+ VT+ LID +K G ++ A ++Y RM+ G+ P F +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 130 LKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ K L A++L E V+ G ++VTYNI++ A L M + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 189 TPSLVSYNHI--ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
P V+Y+ + +LGHC G +++A +V + +K P+ Y L+D + K G+ E+A
Sbjct: 536 EPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 247 FGVFEQMMAA 256
+ ++ M+ A
Sbjct: 594 WQWYQAMLHA 603
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL EM G P+ TY +I + R + EA+ + ++M +G + + +L+ H
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G ++ A+ ++ + G++P+ T+SV+I+C K G + A +L+ M G P +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ K +NA +L + G VTY+I++ L G + EA + +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M K P Y ++ + G ++ A+ +L GL+PN T L+ F +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 243 FERAFGVFEQMMAANANLQITQFT 266
A+ + + M+A + +T
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYT 648
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + + M+A G P TY+ +I + G++ A +L EMV+ G N++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H + +ALKL+ ++ AG P+ VT+S++++ G +E+A ++ M+
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ + K +E A++ + G+ +V T N LLS + K+ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKG 206
L M++ G+ PSL +Y ++L C G
Sbjct: 632 LQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M+ G P TY ++I + G + A+ + M G+ + + ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + +A KLF E+V+ G PN VT+++++D +K + + A +LY M+ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+++ LE A + E + I Y +L+ G V +A
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M+ G+ P++ + N ++ R + +AY ++ +L GL+P+ TYT L+
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 10 RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
R G+ TYT+++G R +L DEMV G N + L+ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
N A+ +F+++ EAG P+ VT+ LID +K G ++ A ++Y RM+ G+ P F +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 130 LKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ K L A++L E V+ G ++VTYNI++ A L M + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 189 TPSLVSYNHI--ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
P V+Y+ + +LGHC G +++A +V + +K P+ Y L+D + K G+ E+A
Sbjct: 536 EPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 247 FGVFEQMMAA 256
+ ++ M+ A
Sbjct: 594 WQWYQAMLHA 603
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL EM G P+ TY +I + R + EA+ + ++M +G + + +L+ H
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G ++ A+ ++ + G++P+ T+SV+I+C K G + A +L+ M G P +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ K +NA +L + G VTY+I++ L G + EA + +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M K P Y ++ + G ++ A+ +L GL+PN T L+ F +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 243 FERAFGVFEQMMAANANLQITQFT 266
A+ + + M+A + +T
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYT 648
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + + M+A G P TY+ +I + G++ A +L EMV+ G N++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H + +ALKL+ ++ AG P+ VT+S++++ G +E+A ++ M+
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ + K +E A++ + G+ +V T N LLS + K+ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKG 206
L M++ G+ PSL +Y ++L C G
Sbjct: 632 LQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M+ G P TY ++I + G + A+ + M G+ + + ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + +A KLF E+V+ G PN VT+++++D +K + + A +LY M+ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+++ LE A + E + I Y +L+ G V +A
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M+ G+ P++ + N ++ R + +AY ++ +L GL+P+ TYT L+
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 10 RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
R G+ TYT+++G R +L DEMV G N + L+ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
N A+ +F+++ EAG P+ VT+ LID +K G ++ A ++Y RM+ G+ P F +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 130 LKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ K L A++L E V+ G ++VTYNI++ A L M + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 189 TPSLVSYNHI--ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
P V+Y+ + +LGHC G +++A +V + +K P+ Y L+D + K G+ E+A
Sbjct: 536 EPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 247 FGVFEQMMAA 256
+ ++ M+ A
Sbjct: 594 WQWYQAMLHA 603
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL EM G P+ TY +I + R + EA+ + ++M +G + + +L+ H
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G ++ A+ ++ + G++P+ T+SV+I+C K G + A +L+ M G P +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ K +NA +L + G VTY+I++ L G + EA + +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M K P Y ++ + G ++ A+ +L GL+PN T L+ F +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 243 FERAFGVFEQMMAANANLQITQFT 266
A+ + + M+A + +T
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYT 648
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + + M+A G P TY+ +I + G++ A +L EMV+ G N++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H + +ALKL+ ++ AG P+ VT+S++++ G +E+A ++ M+
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ + K +E A++ + G+ +V T N LLS + K+ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKG 206
L M++ G+ PSL +Y ++L C G
Sbjct: 632 LQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M+ G P TY ++I + G + A+ + M G+ + + ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + +A KLF E+V+ G PN VT+++++D +K + + A +LY M+ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+++ LE A + E + I Y +L+ G V +A
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M+ G+ P++ + N ++ R + +AY ++ +L GL+P+ TYT L+
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 134/267 (50%), Gaps = 36/267 (13%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS+ Y I V+ +V + L L + M + + ++ + L+ G C +N A +L
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FDE++ + P+ +T++ LID K G+ EK+F++ RMK I+P++ LLKG K
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 136 QNMLENAYRLLDE-----------------------------------AVEHGIA-SVVT 159
M+E+A +L E AV+ G+ + T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 160 YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
+ILL+ LC GK+ +A +L + M+KG+ P+ V YN +I G+CRKG + A + +
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERA 246
K+G+KP+ L Y LI F + G+ E A
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENA 443
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LKEM+ LG++P T++ + AL + + V+SGV +N + L+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSS-------------------- 99
C G I A ++ + G+ PN V ++ +ID C
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 100 -------------KIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
++G ME A + N+MKL G+ P+V L+ G+ ++ + + +L
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 147 DEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
E ++G + +VV+Y L++ LC K++EA + M +GV+P + YN +I G C K
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G ++DA+ +LKKG++ N +TY LIDG G A
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM A +PS TY ++I + GN ++ ++++ M + ++I +L+K
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G + A + E+ + G P+A TFS+L D S E A +Y G++
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL K+ +E A +L + G + + V YN ++ C G +V A +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M +G+ P ++YN +I C G M++A +N++ KG+ P+ TY LI G+ +K
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 241 GDFERAFGVFEQM 253
+F++ F + ++M
Sbjct: 473 YEFDKCFDILKEM 485
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
+EM A G +P+E Y ++I R+G++V A + M G+ + + L++ C L
Sbjct: 379 REM-AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G++ +A K +++ GV+P+ T+++LI + +K F++ M+ G P V
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L+ K + L A + + + G++ V YN+L+ C GK+ +A +M+
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ +LV+YN +I G G + +A ++ I +KGLKP+ TY LI G+ G+ +R
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 246 AFGVFEQM 253
++E+M
Sbjct: 618 CIALYEEM 625
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 7/253 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+LKEM G +P+ +Y ++I + ++EA +K +M + GV + + L+ G C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G I A + E+++ G+ N VT++ LID S G + +A +L + G++P VF
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVV-TYNILLSWLCGLGKVVEACNLLDKM 183
L+ G+ ++ L +E GI + TY++L+S LC E L +++
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC----TKEGIELTERL 655
Query: 184 MSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ + P L+ YN ++ + G M+ A+++ ++++K + + TY LI G K G
Sbjct: 656 FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 243 FERAFGVFEQMMA 255
+ ++M A
Sbjct: 716 LCEVRSLIDEMNA 728
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + KEM G + TY ++I G + EA L E+ G+ ++ SL+
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQ 120
G+ G++ + L++E+ +G+ P T+ +LI +K G EL R+ M ++
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLK 662
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + + +L + +E A+ L + +E I TYN L+ +GK+ E +L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+D+M ++ + P +YN I+ GHC AY + +KG + L+ G +
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 240 KGDFERAFGVFEQM 253
+ + A V +M
Sbjct: 783 EWRSKEAEIVISEM 796
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ-----------NML 139
SVL++ S I +A +L+ ++ GI P+ + LL K N+L
Sbjct: 115 LSVLLNESKMIS---EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
E+ +R S Y + L V + L ++M + PS+ YN +I
Sbjct: 172 ESDFR----------PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLI 221
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C+ M+DA + + +L + L P+ +TY LIDG+ K G+ E++F V E+M A +
Sbjct: 222 DGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Query: 260 LQITQFTPL 268
+ F L
Sbjct: 282 PSLITFNTL 290
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + + G +PS TY+ ++ R + A ++ DEM+ V+++ +L+
Sbjct: 192 AQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C GD++ K+F E+ G+ P+A +F++ I G + A+++ +RMK + P
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP 311
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V+ ++K K +++AY LLDE ++ G TYN ++++ C +V A LL
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF-K 239
+M P +YN ++ R G D A + + ++ P TYT +I G K
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Query: 240 KGDFERAFGVFEQMM 254
KG E A FE M+
Sbjct: 432 KGKLEEACRYFEMMI 446
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
AC+ M G P ++ + + +V A + G+ + + L++
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + D + A K+FDE++E + + ++ L+D K G ++ ++++ M +G++P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ + + + +AY++LD + + +V T+N ++ LC KV +A LL
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M+ KG P +YN I+ HC ++ A +++R+ + P+ TY ++ +
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 241 GDFERAFGVFEQM 253
G F+RA ++E M
Sbjct: 397 GRFDRATEIWEGM 409
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
+ A + F+ +VE G+ P L+ + A E + + K GI P+ L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 130 LKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
++G+ + A ++ DE +E + ++ YN LL LC G V + +M + G+
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
P S+ I +C G + AY V++R+ + L PN T+ +I K + A+
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 249 VFEQMMAANAN 259
+ ++M+ AN
Sbjct: 335 LLDEMIQKGAN 345
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L M+ +P+ T+ +I T + V +A L DEM+ G + S+M
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
HC ++N A KL + P+ T+++++ +IG ++A E++ M P
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 122 TVFIVKFLLKGF-QKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKV 173
TV ++ G +K+ LE A R + ++ GI T +L + L G G++
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 56 ATSLMKGHCLLGDINSALK---LFDEIVEAG----VAPNAVTFSVLIDCSSKIGSMEKAF 108
A SL H L+ + S+ + L+D ++EA ++ F ++ S+ +A
Sbjct: 99 AHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEAC 158
Query: 109 ELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWL 167
+NRM GI+P V + LL + + +A +A GI S TY+IL+
Sbjct: 159 RAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 168 CGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
+ A + D+M+ + L++YN ++ C+ G +D Y + + GLKP+A
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 228 LTYTPLIDGFFKKGDFERAFGVFEQM 253
++ I + GD A+ V ++M
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRM 304
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 52/301 (17%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +EM+ G + TYT ++ + + G + +A + +EM G N++ T+L+ +
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM---------- 114
++ A +LF+ ++ G PN VT+S LID K G +EKA +++ RM
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 115 ------KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWL 167
+P V LL GF K + +E A +LLD ++E + + Y+ L+ L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 168 CGLGKVVE-----------------------------------ACNLLDKMMSKGVTPSL 192
C +GK+ E A +L KM+ P++
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
V Y +I G C+ G D+AY +M + +KG +PN +TYT +IDGF G E + E+
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 253 M 253
M
Sbjct: 805 M 805
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 21/286 (7%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++EM G+IP TY+ V+ + A L +EM G+ ++ T ++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G I A K F+E+ E G PN VT++ LI K + A EL+ M G P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 122 TVFIVKFLLKGFQKQNMLENA-------------------YRLLDEAVEHGIASVVTYNI 162
+ L+ G K +E A ++ D+ E +VVTY
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER--PNVVTYGA 644
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
LL C +V EA LLD M +G P+ + Y+ +I G C+ G +D+A V + + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
TY+ LID +FK + A V +M+ + + +T +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 42/294 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L MRA +P+ TY++++ C+ + + R+ + M+ G + + SL+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI-------------------------- 95
+C GD + A KL ++V+ G P V +++LI
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 96 ---------------DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
C G EKAF + M G P +L + +E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 141 NAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A+ L +E G +A V TY I++ C G + +A ++M G TP++V+Y +I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + + A + +L +G PN +TY+ LIDG K G E+A +FE+M
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A K EM A G + ++ +S G +A + EM+ G + + ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C + A LF+E+ G+ + T+++++D K G +E+A + +N M+ +G
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P V L+ + K + A L + + G + ++VTY+ L+ C G+V +AC +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 180 LDKMM-SKGV---------------TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
++M SK V P++V+Y ++ G C+ +++A +++ + +G
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+PN + Y LIDG K G + A V +M
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL M G P++ Y ++I + G + EA +K EM G P + +SL+
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ + + A K+ +++E APN V ++ +ID K+G ++A++L M+ G QP
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF +E LL+ G+A + VTY +L+ C G + A NLL
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M Y +I G ++ ++ +++ I + P Y LID K
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 241 GDFERAFGVFEQMMAANANL 260
E A + E++ +A L
Sbjct: 896 QRLEMALRLLEEVATFSATL 915
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A K+L +M P+ YT +I + G EA +L M G N++ T+++
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G ++G I + L+L + + GVAPN VT+ VLID K G+++ A L MK
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNL 179
+ +++GF K+ + + LLDE + A ++ Y +L+ L ++ A L
Sbjct: 847 THTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 180 LDKM--MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
L+++ S + +YN +I C ++ A+ + + + KKG+ P ++ LI G
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 238 FKKGDFERAF 247
F+ A
Sbjct: 965 FRNSKISEAL 974
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE-A 149
+VL+ + GS A E R+K +P+ L++ F K + L++A + E +
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 150 VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
+ + T LC +GK EA L++ ++ P V Y +I G C +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+A +NR+ PN +TY+ L+ G K R V MM
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ +M+ PS+ Y +V+ V + + A + M G+P + L+K
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 64 CL-LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C G +++ LK+F E+ + G P++ T+ LI + G +++A +L+ M PT
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLD 181
V L+ G ++ A R L+E GI +V TY+ L+ LC G+ ++A L +
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
MM++G P++V+Y +I G C++ + +A +++R+ +GLKP+A Y +I GF
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 242 DFERAFGVFEQMM 254
F A ++M+
Sbjct: 347 KFREAANFLDEMI 359
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+A K K MR +G P+ + +I C G V L++ EM G + +L
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLM 117
+ G C G I+ A KLF E+VE AP VT++ LI+ C SK ++++A MK
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK--NVDEAMRYLEEMKSK 256
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
GI+P VF L+ G K A L + + G ++VTY L++ LC K+ EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
LLD+M +G+ P Y +I G C +A + ++ ++ G+ PN LT+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 9/260 (3%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ EM G P TY ++I R G + EA +L EMV ++ TSL+ G
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C +++ A++ +E+ G+ PN T+S L+D K G +A EL+ M G +P +
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G K+ ++ A LLD G+ Y ++S C + K EA N LD+
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 183 MMSKGVTPSLVSY-------NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
M+ G+TP+ +++ N ++ G C A+++ + +G+ T L+
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 236 GFFKKGDFERAFGVFEQMMA 255
KKG+F++A + ++++
Sbjct: 417 CLCKKGEFQKAVQLVDEIVT 436
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL EM P+ TYTS+I NV EA+R +EM + G+ N+ +SLM
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G A++LF+ ++ G PN VT++ LI K +++A EL +RM L G++P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA--------SVVTYNILLSWLCGLGKV 173
+ ++ GF + A LDE + GI V T N ++ LC
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYP 389
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
A L M S+G++ + + ++ C+KG A +++ I+ G P+ T+ L
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 234 I 234
I
Sbjct: 450 I 450
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 118/235 (50%), Gaps = 4/235 (1%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
E L ++ ++ N V +I++ S+ +G+ + +L++F ++ + P+ + ++
Sbjct: 71 EDLIVRMKIENCVVSEDILL--SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVL 128
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN-MLENAYRLLDEAVEHGI 154
+ + AF+ Y M+ +G+ PTV + L+K + + ++ ++ E + G
Sbjct: 129 AILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC 188
Query: 155 -ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS 213
TY L+S LC G++ EA L +M+ K P++V+Y +I G C +D+A
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 214 VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ + KG++PN TY+ L+DG K G +A +FE MMA + +T L
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L M +LG P+ TY I + G+ V AL ++M G+ NI+ + +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G A ++F + + G+ P++VT+++++ C SK+G +++A +L + M G +P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V +V L+ K + ++ A+++ E + +VVTYN LL+ L GK+ EA L
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M+ KG P+ +++N + C+ + A ++ +++ G P+ TY +I G K
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 241 GDFERAFGVFEQM 253
G + A F QM
Sbjct: 657 GQVKEAMCFFHQM 669
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ + M G+ PS TY+S++ ++ ++ + L EM G+ N+ T ++
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G IN A ++ + + G P+ VT++VLID ++ A E++ +MK +P
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
LL F L++ + E + G + VVT+ IL+ LC G EA + L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M +G+ P+L +YN +I G R +DDA + + G+KP A TY ID + K
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 241 GDFERAFGVFEQM 253
GD A FE+M
Sbjct: 447 GDSVSALETFEKM 459
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+ EM G +P T+T ++ + GN EA D M + G+ N+ +L+ G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ ++ AL+LF + GV P A T+ V ID K G A E + +MK GI P +
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
L K A ++ + G + VTYN+++ +G++ EA LL +
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
MM G P ++ N +I + +D+A+ + R+ + LKP +TY L+ G K G
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
+ A +FE M+ F L
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
++++ G IP TY ++ + G + E L EM N I ++ G G
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 68 DINSALKL-FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
+++ AL L +D + + +P A T+ LID SK G + +A +L+ M G +P I
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM-- 183
L+ GF K + A L V+ G+ + TY++L+ LC +G+V E + ++
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 184 ----------------------------------MSKGVTPSLVSYNHIILGHCRKGCMD 209
S+G+TP L +YN +IL G ++
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+A + N I + GL+PN T+ LI G+ G E A+ V++ M+
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVN-IIVATSLMKGHCLLGDINSALK 74
P+ + +IG+ + + + A+ + +V +G+ + + +++ C +++ A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 75 LFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
LF++ + GV P T+++LI + +E A +++ ++K G P V FLL +
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS-KGVTPS 191
K ++ + L E H A+ +T+NI++S L G V +A +L +MS + +P+
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+Y +I G + G + +A + +L G +PN Y LI+GF K G+ + A +F+
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 252 QMMAANANLQITQFTPL 268
+M+ + ++ L
Sbjct: 951 RMVKEGVRPDLKTYSVL 967
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 2/254 (0%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K + LG P TY +IG + + A + ++ ++G ++ L+ +
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL-YNRMKLMGIQPTVFI 125
G I+ +L+ E+ N +T +++I K G+++ A +L Y+ M PT
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ G K L A +L + +++G + YNIL++ G+ AC L +M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+GV P L +Y+ ++ C G +D+ + + GL P+ + Y +I+G K E
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 245 RAFGVFEQMMAANA 258
A +F +M +
Sbjct: 1014 EALVLFNEMKTSRG 1027
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ M+ + P+ TY +++ + G + EA+ L + MV G P N I +L
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ ALK+ ++++ G P+ T++ +I K G +++A +++MK + + P
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYP 675
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLL--------DEA-------------VEHGIASVVTY 160
+ LL G K +++E+AY+++ D+ E GI + V++
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 161 N-----------------ILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGH 202
+ ++ + C V A L +K GV P L +YN +I G
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ A V ++ G P+ TY L+D + K G + F ++++M
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 43/295 (14%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A K+L +M +G +P TY ++I V+ G V EA+ +M P + + +L+
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLL 684
Query: 61 KGHCLLGDINSALK---------------LFDE------IVEAGVAPNAVTFS------- 92
G I A K LF E + EAG+ NAV+FS
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI-DNAVSFSERLVANG 743
Query: 93 ----------VLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+I S K ++ A L+ + K +G+QP + L+ G + +M+E
Sbjct: 744 ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 142 AYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A + + G I V TYN LL GK+ E L +M + + +++N +I
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 201 GHCRKGCMDDAYSVMNRILK-KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G + G +DDA + ++ + P A TY PLIDG K G A +FE M+
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 58 SLMKGHCLLGD-INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
+L+ G L D I A +F ++ G P+ T++ L+D K G +++ FELY M
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLGKVV 174
+ ++ G K +++A L + + S TY L+ L G++
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
EA L + M+ G P+ YN +I G + G D A ++ R++K+G++P+ TY+ L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 235 DGFFKKGDFERAFGVFEQMMAANANLQI 262
D G + F+++ + N +
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDV 996
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L + M G P+ Y +I + G A L MV GV ++ + L+
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL-MGIQ 120
C++G ++ L F E+ E+G+ P+ V ++++I+ K +E+A L+N MK GI
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
P ++ TYN L+ L G V EA +
Sbjct: 1030 PDLY----------------------------------TYNSLILNLGIAGMVEEAGKIY 1055
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+++ G+ P++ ++N +I G+ G + AY+V ++ G PN TY L
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 58 SLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
++ K + G + A ++ E G NA +++ LI K +A E+Y RM L
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
G +P++ L+ G K+ +++ LL E G+ +V T+ I + L GK+ EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+L +M +G P +V+Y +I C +D A V ++ KP+ +TY L+D
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 237 FFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
F D + + +M + FT L
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L++M P T+T++I V+QGN+ EA L EM+ S V N + S++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C+ G + A K FD + G PN VT++ LI K +++ +L+ RM G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+F L+ G+ + L A + V + ++T+ ILL LC G++ A
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M +V+YN +I G C+ ++ A+ + R+ +G+KP+A TYT +I G K
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 241 GDFERAFGVFEQM 253
G A + +M
Sbjct: 470 GPRREADELIRRM 482
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M LG+ PS T+ S++ + +A L MV SG N++V +L+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G++N AL+L +E+ + G+ + VT++ L+ G A + M I P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ F KQ L+ A L E ++ + + VTYN +++ LC G++ +A
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M SKG P++V+YN +I G C+ +D+ + R+ +G + TY LI G+ +
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 241 GDFERAFGVFEQMMAANANLQI 262
G A +F M++ I
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDI 386
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ P+ Y ++I + G + AL L +EM G+ +++ +L+ G C G + A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++ ++++ + P+ VTF+ LID K G++++A ELY M + P ++ G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 133 FQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
L +A + D G +VVTYN L+S C V E L +M +G
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+ +YN +I G+C+ G + A + ++ + + P+ +T+ L+ G G+ E A F+
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 252 QMMAANANLQITQF 265
M + + I +
Sbjct: 411 DMRESEKYIGIVAY 424
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++T +I R + AL + +M+ G +I+ SL+ G CL+ I A L +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
V++G PN V ++ LID K G + A EL N M+ G+ V LL G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+A R+L + ++ I VVT+ L+ G + EA L +M+ V P+ V+YN I
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
I G C G + DA + + KG PN +TY LI GF K + +F++M
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 259 NLQITQFTPL 268
N I + L
Sbjct: 348 NADIFTYNTL 357
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Query: 36 EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
+A L EMV+S +I+ T L+ L + + ++ G++ + +F++LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 96 DCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI- 154
C + + A + +M +G +P++ LL GF N + +A+ L+ V+ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 155 ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
+VV YN L+ LC G++ A LL++M KG+ +V+YN ++ G C G DA +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 215 MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
+ ++K+ + P+ +T+T LID F K+G+ + A ++++M+ ++ +
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM +PS +T ++ + +M G+ ++ T L+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C ++ AL + ++++ G P+ VTF L+ + + AF L M G +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V + L+ G K L A LL+E + G+ A VVTYN LL+ LC G+ +A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
MM + + P +V++ +I ++G +D+A + +++ + PN +TY +I+G
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G A F+ M + + + L
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL + M G+ TY ++I + G + AL + MV+ V +II L+ G
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C+ G+I SAL FD++ E+ V ++++I K +EKA+EL+ R+ + G++P
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
++ G K A L+ E GI
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 133/256 (51%), Gaps = 3/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L EM G P E + ++ + G+V EA ++ ++M P N+ TSL+
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLY 244
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A ++ ++ EAG+ P+ V F+ L+ + G M A++L N M+ G +P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 122 TVFIVKFLLKGF-QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
V L++ + + ++ A R+ E +G A +VTY L+S C G + + ++
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
LD M KGV PS V+Y I++ H +K ++ ++ ++ ++G P+ L Y +I K
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACK 424
Query: 240 KGDFERAFGVFEQMMA 255
G+ + A ++ +M A
Sbjct: 425 LGEVKEAVRLWNEMEA 440
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
V +A+ + DEM G+ + V L+ C G + A K+F+++ E PN F+
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTS 241
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
L+ + G + +A E+ +MK G++P + + LL G+ + +AY L+++ + G
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 154 I-ASVVTYNILLSWLCGLGKVV-EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
+V Y +L+ LC K + EA + +M G +V+Y +I G C+ G +D
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YSV++ + KKG+ P+ +TY ++ KK FE + E+M
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 6/273 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A L+ +MR G+ P+ YT +I C + + EA+R+ EM G +I+ T+L+
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G I+ + D++ + GV P+ VT+ ++ K E+ EL +MK G
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + I +++ K ++ A RL +E +G++ V T+ I+++ G ++EACN
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 469
Query: 180 LDKMMSKGV--TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK--GLKPNALTYTPLID 235
+M+S+G+ P + ++ R ++ A V + I K + N +T I
Sbjct: 470 FKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIH 529
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ KG + A MM + Q + L
Sbjct: 530 ALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKL 562
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 53 IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN 112
+++ + + + + G I K E++E + F VL+ + ++KA E+ +
Sbjct: 138 VMILSKMRQFGAVWGLIEEMRKTNPELIEPEL------FVVLMRRFASANMVKKAVEVLD 191
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGK 172
M G++P ++ LL K ++ A ++ ++ E ++ + LL C GK
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGK 251
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
++EA +L +M G+ P +V + +++ G+ G M DAY +MN + K+G +PN YT
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 233 LIDGFFK-KGDFERAFGVFEQMMAANANLQITQFTPL 268
LI + + + A VF +M I +T L
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
T+++ + GN + A L EM G+ N++ ++ C G + A +L ++E
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+ P+ VTFS LI+ K + +A E+Y M I PT ++ GF KQ+ +++
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 142 AYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A R+LD G + VVT++ L++ C +V + +M +G+ + V+Y +I
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
G C+ G +D A ++N ++ G+ P+ +T+ ++ G K + +AF + E + +
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 44 MVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS 103
M S + +++++T+++ C G+ +A LF E+ E G+ PN +T++ +ID G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 104 MEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNI 162
A +L M I P + L+ F K+ + A + E + I + +TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
++ C +V +A +LD M SKG +P +V+++ +I G+C+ +D+ + + ++G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+ N +TYT LI GF + GD + A + +M++
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM G P+ TY +I + G +A +L M+ + +I+ ++L+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
++ A +++ E++ + P +T++ +ID K ++ A + + M G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ G+ K ++N + E GI A+ VTY L+ C +G + A +LL
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
++M+S GV P ++++ ++ G C K + A++++ + K
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
I+ V I ++ K NA L E E GI +V+TYN ++ C G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
LL M+ K + P +V+++ +I ++ + +A + +L+ + P +TY +IDGF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
K+ + A + + M + + + F+ L
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 5/250 (2%)
Query: 10 RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
R G+ TYT+++G R E +L DEMV G N + L+ + +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
A+ +F+++ EAG P+ VT+ LID +K G ++ A ++Y RM+ G+ P F +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 130 LKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ K L A+RL E V G ++VT+NI+++ A L M + G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 189 TPSLVSYNHI--ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
P V+Y+ + +LGHC G +++A V + +K P+ Y L+D + K G+ ++A
Sbjct: 531 QPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 247 FGVFEQMMAA 256
+ ++ M+ A
Sbjct: 589 WQWYQAMLQA 598
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL EM G P+ TY +I + R + EA+ + ++M +G + + +L+ H
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G ++ A+ ++ + EAG++P+ T+SV+I+C K G + A L+ M G P +
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ K E A +L + G VTY+I++ L G + EA + +
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M K P Y ++ + G +D A+ +L+ GL+PN T L+ F +
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 243 FERAFGVFEQMMAANANLQITQFT 266
A+ + + M+A + + +T
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTYT 643
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + + M+ G P TY+ +I + G++ A RL EMV G N++ ++
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H + +ALKL+ ++ AG P+ VT+S++++ G +E+A ++ M+
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + L+ + K ++ A++ ++ G+ +V T N LLS + ++ EA NL
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS 213
L M++ G+ PSL +Y ++ C DA S
Sbjct: 627 LQSMLALGLHPSLQTYTLLL------SCCTDARS 654
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +M+ G P TY ++I + G + A+ + M +G+ + + ++
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + +A +LF E+V G PN VTF+++I +K + E A +LY M+ G QP
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
+++ LE A + E ++ + Y +L+ G V +A
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M+ G+ P++ + N ++ R M +AY+++ +L GL P+ TYT L+
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 131/246 (53%), Gaps = 5/246 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +EM P TYT+++ V+ GN+ A + DEM+ G+ + T+
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 62 GHCLLGDINSALKLFDEIVEAGV-APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G LGD + A +L +E+V AP+ ++V ID K+G++ KA E ++ +G+
Sbjct: 488 GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV 547
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P +++G+ + + A L DE + + SV+TY +L+ G++ +A
Sbjct: 548 PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 607
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M +GV P+++++N ++ G C+ G +D+AY + ++ ++G+ PN +YT LI K
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS---K 664
Query: 240 KGDFER 245
DFE+
Sbjct: 665 NCDFEK 670
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 5/257 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ EM+ SE TY +I + G + EA R +M SG V L++G+
Sbjct: 259 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + A + DE++ AG+ P T+++ I G ++ A EL + M P V
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDV 374
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G+ K A L D+ I S+VTYN L+ LC G + A L ++
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M ++ + P +++Y ++ G + G + A V + +L+KG+KP+ YT G + GD
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 243 FERAFGVFEQMMAANAN 259
++AF + E+M+A + +
Sbjct: 495 SDKAFRLHEEMVATDHH 511
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 2/248 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++RA PS TY ++I GN+ A RLK+EM + ++I T+L+K
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ- 120
G G+++ A +++DE++ G+ P+ ++ ++G +KAF L+ M
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P + I + G K L A + G + VTY ++ G+ A NL
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D+M+ K + PS+++Y +I GH + G ++ A+ + K+G++PN +T+ L+ G K
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 240 KGDFERAF 247
G+ + A+
Sbjct: 633 AGNIDEAY 640
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL M A P +Y +++ ++ G VEA L D++ + +I+ +L+
Sbjct: 362 ARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G++ A +L +E+ + P+ +T++ L+ K G++ A E+Y+ M GI+P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
+ G + + A+RL +E A +H + YN+ + LC +G +V+A
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
K+ G+ P V+Y +I G+ G A ++ + +L+K L P+ +TY LI G K
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 240 KGDFERAFGVFEQM 253
G E+AF +M
Sbjct: 598 AGRLEQAFQYSTEM 611
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 35/289 (12%)
Query: 1 MACKLL---KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVAT 57
MA K L ++M G++PS V+ + +A + + M+ G+ +I
Sbjct: 183 MAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242
Query: 58 SLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
+++ GD+ K++ E+ + + VT+++LI+ SK G ME+A + M+
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI----------------------- 154
G T + L++G+ KQ + ++A+ + DE + GI
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 155 ---------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
VV+YN L+ +GK VEA L D + + + PS+V+YN +I G C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G ++ A + + + + P+ +TYT L+ GF K G+ A V+++M+
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 6/249 (2%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
EM G P+ TY I G + +A E+++S +++ +LM G+ +G
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
A LFD++ + P+ VT++ LID + G++E A L M I P V
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM-S 185
L+KGF K L A + DE + GI Y LG +A L ++M+ +
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
P L YN I G C+ G + A +I + GL P+ +TYT +I G+ + G F+
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 246 AFGVFEQMM 254
A ++++M+
Sbjct: 569 ARNLYDEML 577
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV--NSGVPVNIIVATS 58
MA ++ EM G P YT+ +R G+ +A RL +EMV + P ++ +
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP-DLTIYNV 520
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
+ G C +G++ A++ +I G+ P+ VT++ +I + G + A LY+ M
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
+ P+V L+ G K LE A++ E + G+ +V+T+N LL +C G + EA
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
L KM +G+ P+ SY +I +C ++ + +L K ++P+ T+ L
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 2 ACKLLKEMRALGW-IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A +L +EM A P Y I + GN+V+A+ + ++ G+ + + T+++
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+G+ G A L+DE++ + P+ +T+ VLI +K G +E+AF+ MK G++
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P V LL G K ++ AYR L + E GI + +Y +L+S C K E L
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 180 LDKMMSKGVTPSLVSYNH-IILGHCRKGCMDDAYSVMNRIL 219
+M+ K + P Y H + H K + R+L
Sbjct: 678 YKEMLDKEIEPD--GYTHRALFKHLEKDHESREVEFLERLL 716
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 103 SMEKAFEL-YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTY 160
SM + F L + +M G P+V +LK + M+ A + + +EHGI +V+T+
Sbjct: 182 SMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITF 241
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
N +L G + + +M + + S V+YN +I G + G M++A + +
Sbjct: 242 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
G ++ PLI+G+ K+G F+ A+GV ++M+ A
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA L EM PS TY +I + G + +A + EM GV N++ +L+
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G+I+ A + ++ E G+ PN ++++LI + E+ +LY M I+
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 121 PTVFIVKFLLKGFQKQN 137
P + + L K +K +
Sbjct: 688 PDGYTHRALFKHLEKDH 704
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 29/281 (10%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDE------------------ 43
A + L EM +G +P +Y ++I + GN V A L DE
Sbjct: 180 AYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYN 239
Query: 44 ----------MVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
MV SG +++ +S++ C G + L E+ E V PN VT++
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE-H 152
L+D K A LY++M + GI + + L+ G K L A + +E +
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 153 GIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
+ +VVTY L+ LC G + A ++ +M+ K V P++V+Y+ +I G+ +KG +++A
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
S++ ++ + + PN TY +IDG FK G E A + ++M
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL+EM + P+ TYT+++ + + AL L +MV G+PV+++V T LM G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
GD+ A K F ++E PN VT++ L+D K G + A + +M + P V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
++ G+ K+ MLE A LL + + + + TY ++ L GK A L +M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
GV + + ++ R G + + ++ ++ KG+ + + YT LID FFK GD
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +M A G P +I + + G + A+ L + N + ++ + +++ G C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLC 172
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTV 123
G + A + E+V+ G+ P+ V+++ LID K+G+ +A L + + + I T+
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
LL + + +E AYR D + VVT++ +++ LC GKV+E LL +M
Sbjct: 233 -----LLSSYYNLHAIEEAYR--DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 285
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
V P+ V+Y ++ + A ++ ++++ +G+ + + YT L+DG FK GD
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 345
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
A F+ ++ N + +T L
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTAL 370
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 129/267 (48%), Gaps = 8/267 (2%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K MR G P T+ ++ + +QG+ L+L D+M + G+ +++ ++ C
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G + A+ + ++++ + PN T+ + +D SSK + F+ + + GI+ + +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L+ K M + A ++ + G I VT+N L+ V +A + MM
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G++P++ +YN II G G + + ++ + +G++P+ TY LI G K G+ +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 246 AFGVFEQMMA-------ANANLQITQF 265
+ ++ +M+A + N+ I++F
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEF 828
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 37/304 (12%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA +L KEMR +G + +++ R G + E L +MV+ GV ++ I TSL+
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GD +AL +E+ E G+ + V+++VLI K G + + Y M+ GI+
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIE 570
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + ++ +KQ E +L D+ GI S+++ NI++ LC GK+ EA ++
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 180 LDKMMSKGVTPSLVS-----------------------------------YNHIILGHCR 204
L++MM + P+L + YN +I C+
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQ 264
G A VM + +G P+ +T+ L+ G+F +A + MM A + +
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 265 FTPL 268
+ +
Sbjct: 751 YNTI 754
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
S Y ++I T + G +A + +M G + + SLM G+ + + AL +
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
++EAG++PN T++ +I S G +++ + + MK G++P F L+ G K
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 137 NMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
++ + + E + G + TYN+L+S +GK+++A LL +M +GV+P+ +Y
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Query: 196 NHIILGHCR 204
+I G C+
Sbjct: 857 CTMISGLCK 865
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 70/324 (21%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P+ TYT+++ + G++ A + +M+ V N++ +S++ G+ G + A+
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
L ++ + V PN T+ +ID K G E A EL M+L+G++ +I+ L+ +
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 135 KQNMLENAYRLLDEAVEHGIA------------------------------------SVV 158
+ ++ L+ + V G+ VV
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVV 540
Query: 159 TYNILLSWLCGLGKV-----------------VEACNLL-----------------DKMM 184
+YN+L+S + GKV + N++ DKM
Sbjct: 541 SYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
S G+ PSL+S N ++ C G M++A ++N+++ + PN TY +D K +
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
F E +++ L + L
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTL 684
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M + P+ TY + T + + + +++ G+ ++ V +L+
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C LG A + ++ G P+ VTF+ L+ + KA Y+ M GI P
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V +++G +++ + L E G+ TYN L+S +G + + +
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M++ G+ P +YN +I G M A ++ + K+G+ PN TY +I G K
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 8/264 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSL 59
+A + +M + P T + V+ R GNV +A+ E +S G+ +N++ SL
Sbjct: 208 VALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA---FELYNRMKL 116
+ G+ ++GD+ ++ + E GV+ N VT++ LI K G ME+A FEL KL
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-NILLSWLCGLGKVVE 175
+ Q + L+ G+ + + +A R+ D +E G+ + T N L++ C G++VE
Sbjct: 328 VADQ---HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A + +M + P +YN ++ G+CR G +D+A + +++ +K + P +TY L+
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 236 GFFKKGDFERAFGVFEQMMAANAN 259
G+ + G F +++ M+ N
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVN 468
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%), Gaps = 1/237 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY S+I G+V R+ M GV N++ TSL+KG+C G + A +F+ +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E + + + VL+D + G + A +++ M +G++ I L+ G+ K L
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A ++ + + TYN L+ C G V EA L D+M K V P++++YN +
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+ G+ R G D S+ +LK+G+ + ++ + L++ FK GDF A ++E ++A
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 9/257 (3%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+ E+RA G P+ TY ++I G + +A EM+ G+ +N+ + + +
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 65 LLGDINSALKLFDEIVEAGVA-PNAVTFSVLIDCSS----KIGSMEKAFELYNRMKLMGI 119
L I+ A L +IV+ + P + ++ S+ K + ++ E KL+
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL-- 715
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEAC 177
P + + G K LE+A +L + + + I TY IL+ G + +A
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF 775
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
L D+M KG+ P++V+YN +I G C+ G +D A +++++ +KG+ PNA+TY LIDG
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 238 FKKGDFERAFGVFEQMM 254
K G+ A + E+M+
Sbjct: 836 VKSGNVAEAMRLKEKMI 852
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + M G IPS + S++ VR+G AL + D+M++ V ++ + ++
Sbjct: 174 ALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVN 233
Query: 62 GHCLLGDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+C G+++ A+ E + G+ N VT++ LI+ + IG +E + M G+
Sbjct: 234 AYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVS 293
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
V L+KG+ K+ ++E A + + E +A Y +L+ C G++ +A +
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D M+ GV + N +I G+C+ G + +A + +R+ LKP+ TY L+DG+ +
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 240 KGDFERAFGVFEQM 253
G + A + +QM
Sbjct: 414 AGYVDEALKLCDQM 427
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 23 SVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA 82
S+I + G +VEA ++ M + + + +L+ G+C G ++ ALKL D++ +
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
V P +T+++L+ S+IG+ L+ M G+ LL+ K A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 143 YRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
+L + + G + +T N+++S LC + KV EA +LD + P++ +Y + G
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ + G + +A++V + +KG+ P Y LI G FK
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL +M +P+ TY ++ R G + L L M+ GV + I ++L++
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
LGD N A+KL++ ++ G+ + +T +V+I K+ + +A E+ + + + +P
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V + L G+ K L+ A+ + + GI ++ YN L+S + + +L+
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLV 599
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++ ++G+TP++ +Y +I G C G +D AY+ +++KG+ N + + + F+
Sbjct: 600 IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 659
Query: 241 GDFERA 246
+ A
Sbjct: 660 DKIDEA 665
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M P TY +++ R G V EAL+L D+M V ++ L+K
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ +G + L L+ +++ GV + ++ S L++ K+G +A +L+ + G+
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEA-VEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ G K + A +LD + +V TY L +G + EA +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M KG+ P++ YN +I G + ++ ++ + +GL P TY LI G+
Sbjct: 565 EYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
Query: 241 GDFERAFGVFEQMMAANANLQI 262
G ++A+ +M+ L +
Sbjct: 625 GMIDKAYATCFEMIEKGITLNV 646
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+IP E TYT +I C G++ +A L+DEM G+ NI+ +L+KG C LG+++ A
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
+L ++ + G+ PNA+T++ LID K G++ +A L +M I K L++G
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM----------IEKGLVRGS 860
Query: 134 QKQNMLENAYR-LLDEAVEHGIASVVTYN 161
KQ ++ +LD V+ G V+ N
Sbjct: 861 DKQGDVDIPKEVVLDPEVKLGSTGVIEMN 889
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++K + G + +AL +FD + G P+ ++ + L+ + G A +Y++M
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA---SVVTYNILLSWLCGLGKVVE 175
+ P VF ++ + + ++ A E E + +VVTYN L++ +G V
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKET-ESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+L M +GV+ ++V+Y +I G+C+KG M++A V + +K L + Y L+D
Sbjct: 280 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 236 GFFKKGDFERAFGVFEQMM 254
G+ + G A V + M+
Sbjct: 340 GYCRTGQIRDAVRVHDNMI 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 109 ELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWL 167
EL K PTVF +LK + ++ +++NA + D +G I S+++ N LLS L
Sbjct: 143 ELVRVFKEFSFSPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 168 CGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPN 226
G+ A ++ D+M+S V+P + + + ++ +CR G +D A GL+ N
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+TY LI+G+ GD E V M + + +T L
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL 302
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 5/242 (2%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG--VPVNIIVATSLMKGHCLLGDINSAL 73
P+ TY SVI +++G + + EM N G P + I ++L+ + LG +SA+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP-DTITYSALISSYEKLGRNDSAI 253
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
+LFDE+ + + P ++ L+ K+G +EKA +L+ MK G PTV+ L+KG
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 134 QKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K ++ AY + + G+ VV N L++ L +G+V E N+ +M TP++
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 193 VSYNHIILG-HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
VSYN +I K + + S +++ + P+ TY+ LIDG+ K E+A + E
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 252 QM 253
+M
Sbjct: 434 EM 435
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 72/322 (22%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM+ P+E YT+++G + G V +AL L +EM +G + T L+K
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEK--------------- 106
G G ++ A + +++ G+ P+ V + L++ K+G +E+
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 107 -----------AFE----------LYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRL 145
FE +++MK + P+ F L+ G+ K N +E A L
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 146 LDEAVEHGI------------------------------------ASVVTYNILLSWLCG 169
L+E E G S Y +++
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 170 LGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
GK+ EA +L ++M ++G P + +YN ++ G + G +++A S++ ++ + G + + +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 230 YTPLIDGFFKKGDFERAFGVFE 251
+ +++GF + G RA +FE
Sbjct: 552 HNIILNGFARTGVPRRAIEMFE 573
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
+M+A PSE TY+ +I + V +AL L +EM G P SL+
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
+A +LF E+ E ++ ++V+I K G + +A +L+N MK G P V+
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ G K M+ A LL + E+G A + ++NI+L+ G A + + +
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
G+ P V+YN ++ G ++A +M + KG + +A+TY+ ++D
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 6/253 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVR-QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+ EM P+ +Y +VI + +V E D+M V + + L+ G+
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK--LMGIQP 121
C + AL L +E+ E G P + LI+ K E A EL+ +K +
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V+ V ++K F K L A L +E G V YN L+S + G + EA +LL
Sbjct: 480 RVYAV--MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
KM G + S+N I+ G R G A + I G+KP+ +TY L+ F
Sbjct: 538 RKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 241 GDFERAFGVFEQM 253
G FE A + +M
Sbjct: 598 GMFEEAARMMREM 610
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L KE++ S Y +I + G + EA+ L +EM N G ++ +LM
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G IN A L ++ E G + + +++++ ++ G +A E++ +K GI+P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILL 164
LL F M E A R++ E + G +TY+ +L
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
V+ + S L+ + + KA ++ + K +PT ++ ++ E +
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 144 RLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
+ E G +TY+ L+S LG+ A L D+M + P+ Y ++
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ + G ++ A + + + G P TYT LI G K G + A+G ++ M+
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 90 TFSVLIDCSSK---IGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
T+ LI C + G M + + R + + P V + L+K + M+ A +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAV--LSELVKALGRAKMVSKALSVF 185
Query: 147 DEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG-VTPSLVSYNHIILGHCR 204
+A + TYN ++ L G+ + + +M ++G P ++Y+ +I + +
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQ 264
G D A + + + ++P YT L+ +FK G E+A +FE+M A + +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 265 FTPL 268
+T L
Sbjct: 306 YTEL 309
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ R P+ Y+S + G+++ A + E+ G+ + + T+++
Sbjct: 360 AIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C LG + A + F ++++G P+ T ++LI S+ GS+ A ++ MK G++
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V L+ G+ K + L + L+DE GI+ V TYNIL+ + G + EA ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+++ +G PS +++ +I G ++G +A+ + + +KP+ +T + L+ G+ K
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
E+A +F +++ A + + L
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 117/222 (52%), Gaps = 1/222 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS T T +IG C R G++ +A + M G+ ++++ +LM G+ +N +L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
DE+ AG++P+ T+++LI G +++A E+ + + G P+ ++ GF K
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ + A+ L + + VVT + LL C ++ +A L +K++ G+ P +V
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
YN +I G+C G ++ A ++ ++++G+ PN T+ L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA KL ++ G PS G S++ +R + A + M++ G +N V + +
Sbjct: 219 MALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFI 278
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ +C G + +L + G+ P+ V F+V ID K G +++A + ++KL GI
Sbjct: 279 RKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF K E A +L+ ++ Y+ LS +C G ++ A +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--PNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++ G+ P V Y +I G+C G D A+ +LK G P+ T T LI +
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G A VF M L + + L
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNL 484
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +E+ LG +P YT++I G +A + ++ SG P ++ +T L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G I+ A +F + G+ + VT++ L+ K + K FEL + M+ GI P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ + ++ A ++ E + G + S + + ++ G EA L
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M + P +V+ + ++ G+C+ M+ A + N++L GLKP+ + Y LI G+
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 241 GDFERA 246
GD E+A
Sbjct: 632 GDIEKA 637
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
E ++ +I C+R+ V AL+L ++ G+ + V SL+K + + A + +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
++ G NA S+ I G +K +EL MK GI+P + + K
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 138 MLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
L+ A +L + GI+ V+ + ++ C +GK EA L+ S + P++ Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYS 377
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ C G M A ++ I + GL P+ + YT +IDG+ G ++AF F ++ +
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 257 NANLQITQFTPL 268
+T T L
Sbjct: 438 GNPPSLTTSTIL 449
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L+ EMR+ G P TY +I + V +G + EA + E++ G + + T ++ G
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
GD A L+ + + + P+ VT S L+ K MEKA L+N++ G++P V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ G+ C +G + +AC L+ M
Sbjct: 619 VLYNTLIHGY----------------------------------CSVGDIEKACELIGLM 644
Query: 184 MSKGVTPSLVSYNHIILG 201
+ +G+ P+ +++ ++LG
Sbjct: 645 VQRGMLPNESTHHALVLG 662
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++ E+ G++PS +T VIG ++G+ EA L M + + +++ ++L+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C + A+ LF+++++AG+ P+ V ++ LI +G +EKA EL M G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 122 TVFIVKFLLKGFQKQ---NMLENAYRLLDEAV 150
L+ G + + N +A LL+E +
Sbjct: 652 NESTHHALVLGLEGKRFVNSETHASMLLEEII 683
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ R P+ Y+S + G+++ A + E+ G+ + + T+++
Sbjct: 360 AIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C LG + A + F ++++G P+ T ++LI S+ GS+ A ++ MK G++
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V L+ G+ K + L + L+DE GI+ V TYNIL+ + G + EA ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+++ +G PS +++ +I G ++G +A+ + + +KP+ +T + L+ G+ K
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
E+A +F +++ A + + L
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 117/222 (52%), Gaps = 1/222 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS T T +IG C R G++ +A + M G+ ++++ +LM G+ +N +L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
DE+ AG++P+ T+++LI G +++A E+ + + G P+ ++ GF K
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ + A+ L + + VVT + LL C ++ +A L +K++ G+ P +V
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
YN +I G+C G ++ A ++ ++++G+ PN T+ L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA KL ++ G PS G S++ +R + A + M++ G +N V + +
Sbjct: 219 MALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFI 278
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ +C G + +L + G+ P+ V F+V ID K G +++A + ++KL GI
Sbjct: 279 RKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF K E A +L+ ++ Y+ LS +C G ++ A +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--PNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++ G+ P V Y +I G+C G D A+ +LK G P+ T T LI +
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G A VF M L + + L
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNL 484
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +E+ LG +P YT++I G +A + ++ SG P ++ +T L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G I+ A +F + G+ + VT++ L+ K + K FEL + M+ GI P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ + ++ A ++ E + G + S + + ++ G EA L
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M + P +V+ + ++ G+C+ M+ A + N++L GLKP+ + Y LI G+
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 241 GDFERA 246
GD E+A
Sbjct: 632 GDIEKA 637
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
E ++ +I C+R+ V AL+L ++ G+ + V SL+K + + A + +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
++ G NA S+ I G +K +EL MK GI+P + + K
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 138 MLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
L+ A +L + GI+ V+ + ++ C +GK EA L+ S + P++ Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYS 377
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ C G M A ++ I + GL P+ + YT +IDG+ G ++AF F ++ +
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 257 NANLQITQFTPL 268
+T T L
Sbjct: 438 GNPPSLTTSTIL 449
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L+ EMR+ G P TY +I + V +G + EA + E++ G + + T ++ G
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
GD A L+ + + + P+ VT S L+ K MEKA L+N++ G++P V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+ G+ C +G + +AC L+ M
Sbjct: 619 VLYNTLIHGY----------------------------------CSVGDIEKACELIGLM 644
Query: 184 MSKGVTPSLVSYNHIILG 201
+ +G+ P+ +++ ++LG
Sbjct: 645 VQRGMLPNESTHHALVLG 662
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++ E+ G++PS +T VIG ++G+ EA L M + + +++ ++L+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C + A+ LF+++++AG+ P+ V ++ LI +G +EKA EL M G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 122 TVFIVKFLLKGFQKQ---NMLENAYRLLDEAV 150
L+ G + + N +A LL+E +
Sbjct: 652 NESTHHALVLGLEGKRFVNSETHASMLLEEII 683
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 2/218 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P TYTS I R+ V A ++ EM +G N + T L+ G I+ A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
L L ++ + PN T++VLID G +A L+ +M GI+P + L++
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
F + L+ A LL+ +E+G+ +V+TYN L+ C V +A LL KM+ + + P
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPD 363
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
L++YN +I G C G +D AY +++ + + GL PN T
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y +++ + R G V E RL EM+ V +I +L+ G+C LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+AG P+ T++ I + ++ AF+++ M G L+ G + ++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 141 NAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A LL + + +V TY +L+ LCG G+ EA NL +M G+ P Y +I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
C +D+A ++ +L+ GL PN +TY LI GF KK + +A G+ +M+ N
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQN 359
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ KEM G +E +YT +I + EAL L +M + N+ T L+
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G + A+ LF ++ E+G+ P+ ++VLI ++++A L M G+ P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
V L+KGF K+N + A LL + +E + ++TYN L++ C G + A LL
Sbjct: 329 NVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 181 DKMMSKGVTPS 191
M G+ P+
Sbjct: 388 SLMEESGLVPN 398
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
LL + ++E RL E +E ++ + T+N L++ C LG VVEA + ++ G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P +Y I GHCR+ +D A+ V + + G N ++YT LI G F+ + A
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 248 GVFEQMMAANANLQITQFTPL 268
+ +M N + +T L
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVL 266
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 68 DINSALKLFDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM-----GIQP 121
D +AL D I N +++ L+ + + S E +E+ LM ++
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLV---TLLCSQEIPYEVPKITILMIKSCNSVRD 95
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+F+V F + +K + E Y+L + YN LLS L G V E L
Sbjct: 96 ALFVVDFC-RTMRKGDSFEIKYKLTPKC----------YNNLLSSLARFGLVEEMKRLYT 144
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M+ V+P + ++N ++ G+C+ G + +A + +++ G P+ TYT I G ++
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
+ + AF VF++M + +T L
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQL 231
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 58 SLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK-L 116
SL++ + G ++KLF + + G++P+ +TF+ L+ K G A +L++ M+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLL-DEAVEHGIASVVTYNILLSWLCGLGKVVE 175
G+ P + L+ GF K +M++ A+R+ D + H VVTYN ++ LC GKV
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 176 ACNLLDKMMSKG--VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
A N+L M+ K V P++VSY ++ G+C K +D+A V + +L +GLKPNA+TY L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 234 IDG 236
I G
Sbjct: 323 IKG 325
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 48/303 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV--NIIVATSL 59
A ++ K+M P TY ++I R G V A + M+ V N++ T+L
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVT----------------------------- 90
++G+C+ +I+ A+ +F +++ G+ PNAVT
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFT 347
Query: 91 --------FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
F++LI G ++ A +++ M M + P L++ +N + A
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 143 YRLLDEAVEHGI--------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
L +E E + YN + +LC GK +A + ++M +GV S
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PS 466
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
Y +I GHCR+G AY ++ +L++ P+ TY LIDG K G+ A ++M+
Sbjct: 467 YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 255 AAN 257
++
Sbjct: 527 RSS 529
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLM 60
+ KL + M+ +G PS T+ S++ +++G A L DEM + GV + +L+
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM--KLMG 118
G C ++ A ++F ++ P+ VT++ +ID + G ++ A + + M K
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
+ P V L++G+ + ++ A + + + G+ + VTYN L+ L + E
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Query: 178 NLL----DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
++L D + P ++N +I HC G +D A V +L L P++ +Y+ L
Sbjct: 337 DILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 394
Query: 234 IDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
I + +F+RA +F ++ L + PL
Sbjct: 395 IRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 11/228 (4%)
Query: 50 PVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA-- 107
P I T++++ L+ L+ FD + G + +F ++++ + ++ A
Sbjct: 62 PSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARN 121
Query: 108 --FELYNRMK-LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNIL 163
F + R + +Q F L++ + + + + +L + GI+ SV+T+N L
Sbjct: 122 FLFSIERRSNGCVKLQDRYF--NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 164 LSWLCGLGKVVEACNLLDKMM-SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
LS L G+ A +L D+M + GVTP ++N +I G C+ +D+A+ + +
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMM--AANANLQITQFTPL 268
P+ +TY +IDG + G + A V M+ A + + + +T L
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 36/303 (11%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL +A G T S+I G +EA L +E+ SG+ +L+K
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLK 347
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ G + A + E+ + GV+P+ T+S+LID G E A + M+ +QP
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLL 180
F+ LL GF+ + + +++L E G+ YN+++ + A
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 181 DKMMSKGVTPSLVSYNHIILGHC----------------RKGCM---------------- 208
D+M+S+G+ P V++N +I HC R+GC+
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 209 ---DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
DD ++ ++ +G+ PN +T+T L+D + K G F A E+M + T +
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 266 TPL 268
L
Sbjct: 588 NAL 590
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 5/254 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++LKEM+++G P Y VI T + + A+ D M++ G+ + + +L+ H
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G A ++F+ + G P A T++++I+ + L +MK GI P V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ + K +A L+E G+ S YN L++ G +A N
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 183 MMSKGVTPSLVSYNHII--LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S G+ PSL++ N +I G R+ +A++V+ + + G+KP+ +TYT L+ +
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDA--EAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 241 GDFERAFGVFEQMM 254
F++ V+E+M+
Sbjct: 668 DKFQKVPVVYEEMI 681
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVP-----VNIIVATSL 59
+LKEM A P+ ++ ++ +G + ++ EM + GV N+++ T
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT-F 454
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
K +CL + A+ FD ++ G+ P+ VT++ LIDC K G A E++ M+ G
Sbjct: 455 GKFNCL----DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
P ++ + Q ++ RLL + GI +VVT+ L+ G+ +A
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L++M S G+ PS YN +I + ++G + A + + GLKP+ L LI+ F
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630
Query: 239 KKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ AF V + M + +T L
Sbjct: 631 EDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNV--VEALRLKDEMVNSGVPVNIIVATSL 59
A L+ +MR G+ Y+ VI + R + V LRL E+ + +++ + +
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI 275
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ G GD + AL+L G++ T +I + G +A L+ ++ GI
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACN 178
+P LLKG+ K L++A ++ E + G++ TY++L+ G+ A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+L +M + V P+ ++ ++ G +G + V+ + G+KP+ Y +ID F
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 239 KKGDFERAFGVFEQMMA 255
K + A F++M++
Sbjct: 456 KFNCLDHAMTTFDRMLS 472
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA--LKLFD 77
TY ++IG C R ++ +AL L +M G + + + +++ I+S L+L+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
EI + + + +I +K G KA +L + G+ + ++
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 138 MLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
A L +E + GI YN LL G + +A +++ +M +GV+P +Y+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+I + G + A V+ + ++PN+ ++ L+ GF +G++++ F V ++M
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A ++ + M G +P TY +I + Q + RL +M + G+ N++ T+L+
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ G N A++ +E+ G+ P++ ++ LI+ ++ G E+A + M G++
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P++ + L+ F + A+ +L E+G+ VVTY L+ L + K + +
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Query: 180 LDKMMSKGVTP 190
++M+ G P
Sbjct: 677 YEEMIMSGCKP 687
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +KEM+ L P+ T+ +I + G++ +L + D M G + L+
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + A+++ DE+ AGV+ N T++ ++ + +G KAFE + R++ G+
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+F + LLK K +++A + E I + YNIL+ G V EA +L+
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M +GV P + +Y I + G M+ A + + G+KPN TYT LI G+ +
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 241 GDFERAFGVFEQMMA 255
E+A +E+M A
Sbjct: 813 SLPEKALSCYEEMKA 827
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y +I + N+ A L EM G+ I + ++M G+ ++ D L +F +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E G P VT+ LI+ +K+G + KA E+ MK G++ + ++ GF K
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 141 NAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
NA+ + ++ V+ G+ V+ YN ++S CG+G + A + +M P+ ++ II
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G+ + G M + V + + + G P T+ LI+G +K E+A + ++M A +
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 260 LQITQFTPL 268
+T +
Sbjct: 657 ANEHTYTKI 665
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 36/285 (12%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY+ +I V+ + A + ++MV G+ ++I+ +++ C +G+++ A++ E+
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ P TF +I +K G M ++ E+++ M+ G PTV L+ G ++ +
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 140 ENAYRLLDE-------AVEH-------GIASV----------------------VTYNIL 163
E A +LDE A EH G ASV TY L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 164 LSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
L C G++ A + +M ++ + + YN +I G R+G + +A ++ ++ K+G+
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
KP+ TYT I K GD RA E+M A I +T L
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + MRA G P+ YTS+I ++ EAL +M G+ ++++ + ++
Sbjct: 328 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 62 G-----------------------------------HCLLGDINSALKLFDEIVEAGVAP 86
G HC ++ A L E+ E G+
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK----QNMLENA 142
+ ++D + + +K ++ R+K G PTV L+ + K LE +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 143 YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
+ +E V+H + TY+++++ L A + + M+ +G+ P ++ YN+II
Sbjct: 508 RVMKEEGVKHNLK---TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
C G MD A + + K +P T+ P+I G+ K GD R+ VF+ M
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS + ++ R+G++ A + M G+ + TSL+ + + D++ AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
++ E G+ + VT+SV++ SK G E A ++ K + I ++ +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+E A L+ E E GI A + Y+ ++ + + + ++ G TP++V+
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
Y +I + + G + A V + ++G+K N TY+ +I+GF K D+ AF VFE M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + KEM A + Y +I R+G+V EA L +M GV +I TS +
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
GD+N A + +E+ GV PN T++ LI ++ EKA Y MK MGI+P
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 122 TVFIVKFLLKGFQKQNMLENAY------RLLDEAVEHGIASVVTYNILLSWLCGLGKVVE 175
+ LL + + AY + E VE G+ +V + W L K+
Sbjct: 833 DKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL--IVDMGTAVHWSKCLCKIEA 890
Query: 176 ACNLLDKMMSKGVTPSLVSYNH 197
+ L + + K P S++H
Sbjct: 891 SGGELTETLQKTFPPDWSSHHH 912
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L EM G +E TYT ++ G+ +A + N G+ V+I +L+K
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G + SAL + E+ + N+ +++LID ++ G + +A +L +MK G++P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ TY +S G + A ++
Sbjct: 763 DIH----------------------------------TYTSFISACSKAGDMNRATQTIE 788
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + GV P++ +Y +I G R + A S + G+KP+ Y L+ +
Sbjct: 789 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Query: 242 DFERAF 247
A+
Sbjct: 849 SIAEAY 854
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +++R+ G P T ++ + V+Q ++ +MV GV NI V L+
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
GD A KL E+ E GV P+ T++ LI K +A + +RM+ G+ P +
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIV 274
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+ GF ++ + A RL E + A+ VTY L+ C + + EA L + M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVME 334
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
S+G +P +V+YN I+ C G + +A ++ + K ++P+ +T LI+ + K D
Sbjct: 335 SRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMV 394
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
A V ++M+ + L + + L
Sbjct: 395 SAVKVKKKMIESGLKLDMYSYKAL 418
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ K+M LG + + Y ++ C + G+ +A +L EM GV +I +L+ +
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C AL + D + +GVAPN VT++ I S+ G M +A L+ +K +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANH 307
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ G+ + N ++ A RL + G + VVTYN +L LC G++ EA LL +
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M K + P ++ N +I +C+ M A V ++++ GLK + +Y LI GF K +
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 243 FERA 246
E A
Sbjct: 428 LENA 431
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TYT++I R ++ EALRL++ M + G ++ S+++ C G I A +L E+
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ P+ +T + LI+ KI M A ++ +M G++ ++ K L+ GF K L
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
ENA L +E G + TY+ L+ K E LL++ +G+ + Y +
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
I C+ +D A + + KKGL +++ +T + +++ G A +F+ M
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L + M + G+ P TY S++ G + EA RL EM + + I +L+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C + D+ SA+K+ +++E+G+ + ++ LI K+ +E A E M G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+L+ GF QN + +LL+E + G+ A V Y L+ +C L +V A L
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ M KG+ V + + + R G + +A ++ + + + L N Y + +
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGD 565
Query: 241 GDFERAF 247
D R F
Sbjct: 566 NDVLRFF 572
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + M G P+ TY S I R+G + EA RL E + V N + T+L+
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLID 315
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+C + DI+ AL+L + + G +P VT++ ++ + G + +A L M I+P
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L+ + K + +A ++ + +E G+ + +Y L+ C + ++ A L
Sbjct: 376 DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M+ KG +P +Y+ ++ G + D+ ++ K+GL + Y LI K
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495
Query: 241 GDFERAFGVFEQM 253
+ A +FE M
Sbjct: 496 EQVDYAKVLFESM 508
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 12 LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
+G P+ Y+++I C R G + EA+R+ + M+ G + L+ C G +
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A + + G+ PN V+F LI+ G KAF +++ M +G PT F LLK
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 132 GFQKQNMLENAYRLLD--EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
G K L A + L AV + +V+ YN LL+ +C G + +A +L +M+ + +
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLIDGFFKKGDFERAFG 248
P +Y +I G CRKG A +G + PN + YT +DG FK G ++
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 249 VFEQM 253
EQM
Sbjct: 746 FREQM 750
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ + M G+ PS T +++G+ V+ G V EM+ + ++ L+
Sbjct: 184 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 243
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + L ++ ++G AP VT++ ++ K G + A EL + MK G+ V
Sbjct: 244 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ + N + Y LL + + I + VTYN L++ GKV+ A LL++
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M+S G++P+ V++N +I GH +G +A + + KGL P+ ++Y L+DG K +
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 243 FERAFGVFEQM 253
F+ A G + +M
Sbjct: 424 FDLARGFYMRM 434
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 1/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ M A G PSE +Y ++ + A M +GV V I T ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G ++ A+ L +E+ + G+ P+ VT+S LI+ K+G + A E+ R+ +G+ P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
I L+ + L+ A R+ + + G T+N+L++ LC GKV EA +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M S G+ P+ VS++ +I G+ G A+SV + + K G P TY L+ G K
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G A + + A A + + L
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 36/285 (12%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL++MR P+E TY ++I +G V+ A +L +EM++ G+ N + +L+ GH
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+ ALK+F + G+ P+ V++ VL+D K + A Y RMK G+
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
++ G K L+ A LL+E + GI +VTY+ L++ C +G+ A ++ ++
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSV----------------------------- 214
G++P+ + Y+ +I CR GC+ +A +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 215 ------MNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
M + G+ PN +++ LI+G+ G+ +AF VF++M
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL M++ G TY +I R + + L +M + N + +L+
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G + A +L +E++ G++PN VTF+ LID G+ ++A +++ M+ G+ P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ LL G K + A +G+ +TY ++ LC G + EA LL
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M G+ P +V+Y+ +I G C+ G A ++ RI + GL PN + Y+ LI +
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 241 GDFERAFGVFEQMM 254
G + A ++E M+
Sbjct: 527 GCLKEAIRIYEAMI 540
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y +I +R+G + ++L + M G ++ +++ G+ S E++
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+ + P+ TF++LI+ GS EK+ L +M+ G PT+ +L + K+ +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 141 NAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A LLD G+ A V TYN+L+ LC ++ + LL M + + P+ V+YN +I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
G +G + A ++N +L GL PN +T+ LIDG +G+F+ A +F M A
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LKEM P T+ +I +G+ ++ L +M SG I+ +++ +C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G +A++L D + GV + T+++LI + + K + L M+ I P
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ GF + + A +LL+E + G++ + VT+N L+ G EA + M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+KG+TPS VSY ++ G C+ D A R+ + G+ +TYT +IDG K G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
+ A + +M + I ++ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSAL 484
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 2/251 (0%)
Query: 7 KEMRALGWI-PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
KE A G + P++ YT + + G + +++M N G +I+ +++ G+
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
+G I L E+ PN T+++L+ SK + +F LY + L GI P
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ G + NMLE ++L + G+ T+N+L+S C G++ A +L+ M
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
S G++ + + ++ R ++ V++ + K+G+ P + Y LI+G + GD +
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 245 RAFGVFEQMMA 255
AF V E+M+A
Sbjct: 952 TAFVVKEEMIA 962
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 4/263 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K LK + A+ Y +++ + GN+ +A+ L EMV + + TSL+
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
Query: 62 GHCLLGDINSALKLFDEIVEA--GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
G C G A+ LF + EA V PN V ++ +D K G + +M +G
Sbjct: 697 GLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACN 178
P + ++ G+ + +E LL E ++G ++ TYNILL V +
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L ++ G+ P ++ + ++LG C ++ ++ + +G++ + T+ LI
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 239 KKGDFERAFGVFEQMMAANANLQ 261
G+ AF + + M + +L
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLD 898
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
N + +LI + G ++ + E++ M L G P+V+ +L K + + L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 147 DEAVEHGIA------------------------------------SVVTYNILLSWLCGL 170
E ++ I ++VTYN +L W C
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
G+ A LLD M SKGV + +YN +I CR + Y ++ + K+ + PN +TY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 231 TPLIDGFFKKGDFERAFGVFEQMMA 255
LI+GF +G A + +M++
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLS 366
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + ++ M + G +P+ ++ +I G ++A + DEM G SL+K
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A K + A + V ++ L+ K G++ KA L+ M I P
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACNL 179
+ L+ G ++ A EA G + + V Y + + G+
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
++M + G TP +V+ N +I G+ R G ++ ++ + + PN TY L+ G+ K
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806
Query: 240 KGDFERAFGVFEQMM 254
+ D +F ++ ++
Sbjct: 807 RKDVSTSFLLYRSII 821
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+K M +LG + T +++ R E+ + EM G+ L+
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +GDI +A + +E++ + P V S ++ +K G ++A L M M + P
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
T+ ++ L+ C G V+EA L
Sbjct: 1003 TI----------------------------------ASFTTLMHLCCKNGNVIEALELRV 1028
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M + G+ LVSYN +I G C KG M A+ + + G NA TY LI G +
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR- 1087
Query: 242 DFERAF 247
E AF
Sbjct: 1088 --ETAF 1091
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 109/237 (45%), Gaps = 2/237 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + EM +G P+ TY S++ + G++ EA + + V+ ++ +L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQ 120
C G++ A+ LF E+V+ + P++ T++ LI + G A + G +
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
P + + G K + ++ G +VT N ++ +GK+ + +L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
L +M ++ P+L +YN ++ G+ ++ + ++ + I+ G+ P+ LT L+ G
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 5/244 (2%)
Query: 13 GWIPSEGT-YTSVIGTCVRQGNVVE-ALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDIN 70
G +P + T ++ V+G C + N++E L++ + GV V+ L+ C G+IN
Sbjct: 824 GILPDKLTCHSLVLGIC--ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881
Query: 71 SALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLL 130
A L + G++ + T ++ ++ +++ + + M GI P L+
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 131 KGFQKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
G + ++ A+ + +E + H I V + ++ L GK EA LL M+ +
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGV 249
P++ S+ ++ C+ G + +A + + GLK + ++Y LI G KGD AF +
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061
Query: 250 FEQM 253
+E+M
Sbjct: 1062 YEEM 1065
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
+L P+V+ + L++ + ++ M++++ + +G SV T N +L + G+
Sbjct: 157 RLCNSNPSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 214
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
V + L +M+ + + P + ++N +I C +G + + +M ++ K G P +TY +
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 234 IDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ + KKG F+ A + + M + + + + L
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 97/198 (48%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL G+I E TY ++I R+ V +AL + DEM + + SL+
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G A++ FDE+ E+G+ P+ TF+ +I K G +EKAFE YN +P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ LL G K+ M E A + +E VTYN ++S C K+ EA +LL
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 182 KMMSKGVTPSLVSYNHII 199
+M KG+ P +YN I
Sbjct: 650 EMEEKGLEPDRFTYNSFI 667
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 37/288 (12%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVN----------- 52
+L+ M++L P TY ++I C G +EA +L ++M N GV N
Sbjct: 331 ELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390
Query: 53 -------------------------IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
I+ +L+K + +GD++ AL++ E+ + G+ N
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
+T + ++D K +++A L N G L+ GF ++ +E A + D
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 148 EAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
E + I +V T+N L+ LC GK A D++ G+ P ++N IILG+C++G
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
++ A+ N +K KP+ T L++G K+G E+A F ++
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TY +++ ++G + + L +M +G+ N + +L+ G+C LG + A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ + + V P+ T+++LI+ GSM + EL + MK + +QP V L+ G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLC-------------------------- 168
+ A +L+++ G+ A+ VT+NI L WLC
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 169 ----------GLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
+G + A ++ +M KG+ + ++ N I+ C++ +D+A++++N
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
K+G + +TY LI GFF++ E+A ++++M ++ F L
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG---HCLLGDINSA 72
PS+ + + + +G AL++ +M+ + N++ +L+ G + I+SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFIVKFLLK 131
++FD++V+ GV+ N TF+VL++ G +E A + RM + P +LK
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 132 GFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
K+ L + LL + ++G + + VTYN L+ C LG + EA +++ M V P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
L +YN +I G C G M + +M+ + L+P+ +TY LIDG F+ G A +
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 251 EQMMAANANLQITQFT 266
EQM N ++ Q T
Sbjct: 369 EQM--ENDGVKANQVT 382
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++++EM G + T +++ ++ + EA L + G V+ + +L+
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + AL+++DE+ + + P TF+ LI G E A E ++ + G+ P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ G+ K+ +E A+ +E+++H T NILL+ LC G +A N
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ ++ + + V+YN +I C+ + +AY +++ + +KGL+P+ TY I +
Sbjct: 615 NTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673
Query: 241 G 241
G
Sbjct: 674 G 674
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + E+ G +P + T+ S+I ++G V +A +E + + L+
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G AL F+ ++E + VT++ +I K +++A++L + M+ G++
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 121 PTVF 124
P F
Sbjct: 658 PDRF 661
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L EM G+ P E + ++ + G+V +A +L ++M PVN+ TSL+
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLY 260
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G + A + ++ EAG P+ V ++ L+ + G M A++L M+ G +P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L++ K + +E A ++ E + A VVTY L+S C GK+ + +L
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M+ KG+ PS ++Y HI++ H +K ++ +M ++ + P+ Y +I K
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 241 GDFERAFGVFEQM 253
G+ + A ++ +M
Sbjct: 441 GEVKEAVRLWNEM 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL ++MR + + + +TS++ R G ++EA + +M +G +I+ T+L+
Sbjct: 237 AAKLFEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ G + A L ++ G PNA ++VLI K+ ME+A +++ M+ +
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+ GF K ++ Y +LD+ ++ G+ S +TY ++ E L+
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+KM P + YN +I C+ G + +A + N + + GL P T+ +I+G +
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G A F++M+ ++Q+ L
Sbjct: 476 GCLLEASDHFKEMVTRGL-FSVSQYGTL 502
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
V +A+ + DEM G + V L+ C G + A KLF+++ N F+
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTS 257
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
L+ ++G M +A + +M G +P + LL G+ + +AY LL + G
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 154 IA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
+ Y +L+ LC + ++ EA + +M +V+Y ++ G C+ G +D Y
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
V++ ++KKGL P+ LTY ++ KK FE + E+M
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 125/245 (51%), Gaps = 6/245 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL++MR G+ P+ YT +I + + EA+++ EM +++ T+L+
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G I+ + D++++ G+ P+ +T+ ++ K S E+ EL +M+ + P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ I +++ K ++ A RL +E E+G++ V T+ I+++ L G ++EA +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 181 DKMMSKGVTPSLVSYNHIIL---GHCRKGCMDDAYSVMNRILKKGL-KPNALTYTPLIDG 236
+M+++G+ S+ Y + L + ++ A V + I KG + N L++T I
Sbjct: 486 KEMVTRGLF-SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHA 544
Query: 237 FFKKG 241
F KG
Sbjct: 545 LFSKG 549
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
F VL+ + ++KA E+ + M G +P ++ LL K +++A +L ++
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 151 EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
++ + LL C +GK++EA +L +M G P +V Y +++ G+ G M D
Sbjct: 246 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
AY ++ + ++G +PNA YT LI K E A VF +M + +T L
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL-YNRMKLM 117
L+ G G + ALKLFDE+V+ V P VTF LI K +++A ++ ++ +K+
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVY 217
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
G++PTV I L+K + L A++L DEA E I Y+ L+S L G+ E
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+L++M KG P V+YN +I G C + + A V++ +++KGLKP+ ++Y ++
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 237 FFKKGDFERAFGVFEQM 253
FF+ +E A +FE M
Sbjct: 338 FFRIKKWEEATYLFEDM 354
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVN-SGVPVNIIVATSLM 60
A KL EM P+ T+ ++I + V EAL++K +M+ GV + + SL+
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
K C +G+++ A KL DE E + +A +S LI K G + + M G +
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P L+ GF +N E+A R+LDE VE G+ V++YN++L + K EA L
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ M +G +P +SY + G C ++A +++ +L KG KP ++GF +
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR----RDRLEGFLQ 406
Query: 240 K 240
K
Sbjct: 407 K 407
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 2/241 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TY +I C + G +AL+L DEMV V + +L+ G C + ALK+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 76 FDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++++ GV P ++ LI +IG + AF+L + I+ I L+
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K +L+E E G VTYN+L++ C A +LD+M+ KG+ P ++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
SYN I+ R ++A + + ++G P+ L+Y + DG + FE A + ++M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 254 M 254
+
Sbjct: 390 L 390
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y+++I + ++ G E + +EM G + + L+ G C+ D SA ++ DE+V
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E G+ P+ +++++++ +I E+A L+ M G P + + G + E
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Query: 141 NAYRLLDEAVEHGIASVVTY-NILLSWLCGLGKVVEACNLLDKMMS---KGVTPSLVSYN 196
A +LDE + G L LC GK+ +L K++S +G+ ++
Sbjct: 381 EAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL----EILSKVISSLHRGIAGDADVWS 436
Query: 197 HIILGHCRKGCMDDAYSVMNRILKK 221
+I C++ + D+ ++ +K+
Sbjct: 437 VMIPTMCKEPVISDSIDLLLNTVKE 461
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 74 KLFDEI--------VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
K+FDE+ + + P + F +I+ + +A +++ M Q TV
Sbjct: 61 KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+ LL K LE L E G TYNIL+ G +A L D+M+
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK-KGLKPNALTYTPLIDGFFKKGDFE 244
K V P+ V++ +I G C+ + +A + + +LK G++P Y LI + G+
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELS 240
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
AF + ++ + ++ L
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTL 264
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ +M G P+ TYT +I ++G+ +A +L EM SG + + +L+
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C LG + A +L + G +S LID + +AFELY M I+P
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ + L++G K +E+A +LL GI+ YN ++ LCG G + E +L
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M P ++ +I CR G + +A + I K G P+ T+ LIDG K
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 241 GDFERAFGVFEQM 253
G+ + A + +M
Sbjct: 457 GELKEARLLLHKM 469
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + EM P+ T+ ++ ++G +A ++ D+M G+ N + T L+
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G + A KLF E+ +G P++V + L+D K+G M +AFEL + G
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
+ L+ G + A+ L ++ I ++ Y IL+ L GK+ +A L
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L M SKG++P YN +I C +G +++ S+ + + P+A T+T LI +
Sbjct: 361 LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCR 420
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G A +F ++ + + + F L
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
YT +I + G + +AL+L M + G+ + +++K C G + L E+
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E P+A T ++LI + G + +A E++ ++ G P+V L+ G K L+
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 141 NAYRLLDEAVEHGIASVV------TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
A RLL +E G + + + N + G +++A L G +P +VS
Sbjct: 461 EA-RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
YN +I G CR G +D A ++N + KGL P+++TY LI+G + G E AF +F
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 42 DEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI 101
+E+ + GV V+ L+ + +G A++ F + E P+ T++V++ ++
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL----RV 171
Query: 102 GSMEK-----AFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA- 155
E+ AF +YN M P ++ L+ G K+ +A ++ D+ GI+
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
+ VTY IL+S LC G +A L +M + G P V++N ++ G C+ G M +A+ ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
K G Y+ LIDG F+ + +AF ++ M+ N I +T L
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
++S++ QG + AL L+ +M+ SGV +I L+ G C G I A L E+
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF-QKQNML 139
E G +PN V+++ LI + +++KA L+N M GI+P ++ QK +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 140 ENAYRLLDEAVEHGIAS----VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
N +LL+E ++ A+ +V IL+ G VV+A + +M K V V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
N II G C G M AY M ++K+G+ P+ TY LI K+G F+ A
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+M G P TY ++I ++G EA L M N GV + I +++G C+ G
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
D+N A + ++++ + P + ++V+ID + G A + N M G++P V+
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G+ K L +A+ + +E I TYN+LL C LG + A L D+M+ +
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G P +++Y ++ G C KG + A S+++RI G+ + + + L + + A
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Query: 247 FGVFEQMMAA 256
+ V+++ +A
Sbjct: 565 YLVYKKWLAT 574
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L++EMR +G P+ +Y ++I NV +AL L + M G+ N + ++ C
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 65 LLGDI-NSALKLFDEIVEAGVAP---NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G I N+ KL +EI+++ A + V ++L+D K G++ +A E++ M +
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
+ +++G + AY + + V+ G+ V TYN L+S LC GK EAC+L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
M + GV P +SY II G C G ++ A + +LK L P L + +IDG+ +
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 240 KGDFERAFGVFEQMMA 255
GD A V M++
Sbjct: 418 YGDTSSALSVLNLMLS 433
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 1/248 (0%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
T ++ +C + GNVV+AL + EM VP + +V +++G C G++ +A ++V+
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
GV P+ T++ LI K G ++A +L+ M+ G+ P K +++G +
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 142 AYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A L ++ + V+ +N+++ G A ++L+ M+S GV P++ + N +I
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G+ + G + DA+ V N + + P+ TY L+ G AF ++++M+
Sbjct: 449 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Query: 261 QITQFTPL 268
I +T L
Sbjct: 509 DIITYTEL 516
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
AC L M+ G P + +Y +I G C+ G+V A M+ S + +++ ++
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCI-HGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ GD +SAL + + ++ GV PN T + LI K G + A+ + N M+ I
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P LL L A++L DE + G ++TY L+ LC G++ +A +L
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 180 LDKMMSKGVTPSLVSY 195
L ++ + G+T V +
Sbjct: 533 LSRIQATGITIDHVPF 548
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
+ VI R G+ AL + + M++ GV N+ +L+ G+ G + A + +E+
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+ P+ T+++L+ + +G + AF+LY+ M G QP + L++G + L+
Sbjct: 468 STKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLK 527
Query: 141 NAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS---KGVT-PSLVSY 195
A LL GI V + IL L + EA + K ++ +GV+ PS++++
Sbjct: 528 KAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSILNH 587
Query: 196 NH 197
H
Sbjct: 588 MH 589
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 167 LCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
LC GK+ A L KM+ GV P L+++NH++ G C+ G ++ A ++ + + G PN
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQM 253
++Y LI G + ++A +F M
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTM 217
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%), Gaps = 3/237 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ T ++ + +G EA + + ++ G ++I T+L+ +S L L ++
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ G+ P+ + F+ +I+ SS+ G++++A +++ +MK G +PT L+KG+ K L
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 140 ENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
E + RLLD + + + T NIL+ C K+ EA N++ KM S GV P +V++N
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 198 IILGHCRKGCMDDAYS-VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + R G A ++ R+L +KPN T +++G+ ++G E A F +M
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 124/240 (51%), Gaps = 2/240 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P++ T ++ Q + EA + +M + GV +++ +L K + +G +A +
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 76 F-DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++ V PN T +++ + G ME+A + RMK +G+ P +F+ L+KGF
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
N ++ ++D E G+ VVT++ L++ +G + + M+ G+ P +
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+++ + G+ R G + A ++N++ K G++PN + YT +I G+ G+ ++A V+++M
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G PS TYT+++ RQ + L L ++ +G+ + I+ +++ G+++ A
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFIVKFLLK 131
+K+F+++ E+G P A TF+ LI KIG +E++ L + M + +QP L++
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 132 GFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL-LDKMMSKGVT 189
+ Q +E A+ ++ + +G+ VVT+N L +G A ++ + +M+ V
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVK 528
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGV 249
P++ + I+ G+C +G M++A R+ + G+ PN + LI GF D + V
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEV 588
Query: 250 FEQMMAANANLQITQFTPL 268
+ M + F+ L
Sbjct: 589 VDLMEEFGVKPDVVTFSTL 607
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ T +++ +G + EALR M GV N+ V SL+KG + D++ ++
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEV 588
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
D + E GV P+ VTFS L++ S +G M++ E+Y M GI P + L KG+ +
Sbjct: 589 VDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYAR 648
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS-KGVTPSLV 193
E A ++L++ + G+ +VV Y ++S C G++ +A + KM G++P+L
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLT 708
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+Y +I G A ++ + K + P T + DG+
Sbjct: 709 TYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M G P T+++++ G++ + +M+ G+ +I + L KG+ G+
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFIVK 127
A ++ +++ + GV PN V ++ +I G M+KA ++Y +M ++G+ P + +
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 128 FLLKGFQKQNMLENAYRLLDE 148
L+ GF + A LL +
Sbjct: 712 TLIWGFGEAKQPWKAEELLKD 732
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 7/266 (2%)
Query: 10 RALGWI------PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++GWI P TY +I ++G A+ DE G+ N + L++ +
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C + + A KL ++ E G P+ VT+ +LI G M+ A + ++ G+ P
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
I L+ G K A L E ++ I Y L+ G EA +
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ KGV +V +N +I G CR G +D+A + MNR+ ++ L P+ TY+ +IDG+ K+ D
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
A +F M + +T L
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSL 596
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L E G IP+ +Y +I + A +L +M G +I+ L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G + G ++ A+ + ++++ GV+P+A +++L+ K G A L++ M I
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P ++ L+ GF + + A ++ +VE G+ VV +N ++ C G + EA
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+++M + + P +Y+ II G+ ++ M A + + K KPN +TYT LI+GF
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+GDF+ A F++M + + +T L
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ KE++ G++P+ T+ ++I ++G+ V + RL E+ G+ V++ +++
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + I+ P+ T+++LI+ K G E A + G+ P
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L++ + K + A +LL + E G +VTY IL+ L G + +A N+ K+
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ +GV+P YN ++ G C+ G A + + +L + + P+A Y LIDGF + GDF
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 244 ERAFGVF 250
+ A VF
Sbjct: 502 DEARKVF 508
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 36/268 (13%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P S++ V+ + +A ++ DEM + G V+ L+KG C G + K
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
L + G PN V ++ +I K+G +E A+ ++ +KL G PT+ ++ GF
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 135 KQNMLENAYRLLDEAVEHGI------------------------------------ASVV 158
K+ + RLL E E G+ V
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 159 TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
TYNIL++ LC GK A LD+ KG+ P+ +SY +I +C+ D A ++ ++
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERA 246
++G KP+ +TY LI G G + A
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDA 434
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+AC + M +P + TY+++I V+Q ++ A+++ M + N++ TSL+
Sbjct: 540 LAC--MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS-MEKAFELYNRMKLMGI 119
G C GD A + F E+ + PN VT++ LI +K S +EKA + M
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVT-----------------Y 160
P LL+GF K+ + ++L E HG +S+ + Y
Sbjct: 658 VPNEVTFNCLLQGFVKKT----SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAY 713
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
N L LC G V AC DKM+ KG +P VS+ I+ G C G
Sbjct: 714 NSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 37/277 (13%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A KLL +M G P TY +I V G++ +A+ +K ++++ GV + + LM
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G A LF E+++ + P+A ++ LID + G ++A ++++ G++
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEA-VEHGIASVVTYNILLSWLCGLGKVVEACNL 179
V ++KGF + ML+ A ++ EH + TY+ ++ + A +
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI----- 234
M P++V+Y +I G C +G A + + L PN +TYT LI
Sbjct: 578 FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 235 -------------------------------DGFFKK 240
GF KK
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 102 GSMEKAFELYNRM-KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY 160
GS+ KA E+Y+ + +L P V LL K L +A ++ DE + G SV Y
Sbjct: 148 GSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG-DSVDNY 206
Query: 161 N--ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
+ IL+ +C GKV L++ KG P++V YN II G+C+ G +++AY V +
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDF 243
KG P T+ +I+GF K+GDF
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDF 291
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ +EM++ G+ P T+ ++I R G+ V+A ++ EM +G + +L+
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSM------------------- 104
GD S + ++ G P ++S+++ C +K G+
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 105 -------------------EKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRL 145
E+AF L+ K G +P + I +L F + NM + A +
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLF---KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 146 LDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
L+ E G++ +VTYN L+ G+ +A +L + + P LVSYN +I G CR
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+G M +A +++ + ++G++P TY + G+ G F V E M
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 30 RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAV 89
R+ A +L D++ +++ T+++ + G A+ LF+ + E G +P V
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 90 TFSVLIDCSSKIG-SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
T++V++D K+G S K + + M+ G++ F +L ++ +L A E
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 149 AVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
G VTYN LL G EA ++L +M V+YN ++ + R G
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+A V+ + KKG+ PNA+TYT +ID + K G + A +F M A
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + E+++ G+ P TY +++ + G EAL + EM + P + + L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G A + + + + GV PNA+T++ +ID K G ++A +L+ MK G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACN-L 179
+L K++ ++L + +G + + T+N +L+ LCG + + N +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRV 478
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+M S G P ++N +I + R G DA + + + G TY L++ +
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 240 KGDFERAFGVFEQMMAANANLQITQFT 266
KGD+ V M + T ++
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYS 565
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+L EMR+ G E T ++V+ C R+G + EA E+ + G + +L++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G AL + E+ E ++VT++ L+ + G ++A + M G+ P
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKM 183
++ + K + A +L E G + + TYN +LS L + E +L M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK----GLKPNALTYTPLIDGFFK 239
S G +P+ ++N +L C MD +NR+ ++ G +P+ T+ LI + +
Sbjct: 448 KSNGCSPNRATWN-TMLALCGNKGMD---KFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
G A ++ +M A N +T + L
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNAL 532
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P YT+++ R G + EA ++ EM +G+ N+ + ++ C G I+ A +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F +++++G APNA+TF+ L+ K G EK ++YN+MK +G +P FL++ +
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
LENA ++L+ ++ + T+N + ++ V A + KMM P+ V+
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
YN ++ D + + K ++PN TY L+ F G + A+ +F++M+
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
VRQ ++ A L D M + V ++I T L++ + G + A+ F+ + + G P+
Sbjct: 164 VRQFDL--AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDK 221
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
+ FS++I S+ +A ++ +K +P V + L++G+ + + A ++ E
Sbjct: 222 IAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 149 AVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
GI +V TY+I++ LC G++ A ++ M+ G P+ +++N+++ H + G
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
+ V N++ K G +P+ +TY LI+ + + E A V M+ + + F
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 10/261 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG-VPVNI---IVA 56
+A L+ M++ S T+T +I VR G EA+ + M + G VP I IV
Sbjct: 169 LAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVI 228
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
++L + + A FD + + P+ + ++ L+ + G + +A +++ MKL
Sbjct: 229 SNLSRKR----RASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVE 175
GI+P V+ ++ + + A+ + + ++ G A + +T+N L+ G+ +
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ ++M G P ++YN +I HCR +++A V+N ++KK + NA T+ +
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR 403
Query: 236 GFFKKGDFERAFGVFEQMMAA 256
KK D A ++ +MM A
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEA 424
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ KEM+ G P+ TY+ VI R G + A + +M++SG N I +LM+
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
H G L++++++ + G P+ +T++ LI+ + ++E A ++ N M +
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ + +K+ + A+R+ + +E + VTYNIL+ G +
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL-KKGLKPNALTYTPLIDGFFK 239
+M K V P++ +Y ++ C G ++AY + ++ +K L P+ Y ++ +
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 240 KGDFERAFGVFEQMM 254
G ++ + E+M+
Sbjct: 514 AGQLKKHEELVEKMI 528
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+ P+ TYT ++ R N++EA R+ ++M++ G+ +I+ +++G + A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
KLF + G PN +++++I K SME A E ++ M G+QP + L+ GF
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 134 QKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
Q L+ Y LL E E G TYN L+ + A + +KM+ + PS+
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI 473
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
++N I+ + + +V ++KKG+ P+ +YT LI G +G A E+
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 253 MM 254
M+
Sbjct: 534 ML 535
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M++ G P+ +YT +I +Q ++ A+ D+MV+SG+ + V T L+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +++ +L E+ E G P+ T++ LI + E A +YN+M I+P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ ++K + E + +E ++ GI +Y +L+ L G GK EAC L
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKG 206
++M+ KG+ L+ YN R G
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGG 557
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
TF++ + + +KA ++ MK + V + LL + + + A L D+
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 150 VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
E +++TY +LL+ C + ++EA + + M+ +G+ P +V++N ++ G R
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
DA + + + KG PN +YT +I F K+ E A F+ M+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 12/279 (4%)
Query: 1 MACKLLKEMRALG---WIPSEG------TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV 51
M+CK + +A G W+ EG +Y++VI + G + +AL L DEM GV
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFEL 110
++ L+ G D +A++L+D ++E + V PN T +++I SK G ++ ++
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 111 YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCG 169
+ RMK + ++ L+ G ++ A + +E E + VVTYN +L C
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 170 LGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
GK+ E+ L ++M + ++VSYN +I G G +D+A + + KG + T
Sbjct: 338 CGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 230 YTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
Y I G G +A GV +++ ++ +L + + +
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 2 ACKLLKEMRAL-GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A + K MR + G P+ +Y +++ V V+ L +GV N+ L+
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
K C + A D + + G P+ ++S +I+ +K G ++ A EL++ M G+
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACN 178
P V L+ GF K+ + A L D +E +V T+NI++S L G+V +
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+ ++M L +Y+ +I G C G +D A SV N + ++ + +TY ++ GF
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 239 KKGDFERAFGVFEQMMAANA 258
+ G + + ++ M N+
Sbjct: 337 RCGKIKESLELWRIMEHKNS 356
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+Y +I + G + EA + M G + + G C+ G +N AL + E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+G + ++ +IDC K +E+A L M G++ + L+ G + + L
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A L E ++G +VV+YNIL+ LC GK EA + +M+ G P L +Y+ +
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
+ G CR +D A + ++ L+ GL+ + + + LI G G + A V M N
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 259 NLQITQFTPL 268
+ + L
Sbjct: 601 TANLVTYNTL 610
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
LF AGVAPN T++VLI S K EKA + M G +P VF ++
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 135 KQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLLDKMM-SKGVTPSL 192
K L++A L DE E G+A VT YNIL+ A L D+++ V P++
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
++N +I G + G +DD + R+ + + + TY+ LI G G+ ++A VF +
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 253 MMAANANLQITQFTPL 268
+ A++ + + +
Sbjct: 316 LDERKASIDVVTYNTM 331
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
Y S+I ++ + EA L EM GV +N V +L+ G + A E+
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ G P V++++LI K G +A M G +P + LL G + +
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 140 ENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+ A L + ++ G+ + V+ +NIL+ LC +GK+ +A ++ M + T +LV+YN +
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ G + G + A + + K GL+P+ ++Y ++ G
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +KEM GW P TY+ ++ R + AL L + + SG+ ++++ L+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C +G ++ A+ + + N VT++ L++ K+G +A ++ M MG+QP
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILL 164
+ ++KG + A D+A HGI +V T+NIL+
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+KEM G + ++IG +R + EA EM +G ++ L+
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G A E++E G P+ T+S+L+ + ++ A EL+++ G++
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACNL 179
V + L+ G L++A ++ +EH A++VTYN L+ +G A +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMAN-MEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M G+ P ++SYN I+ G C + A + G+ P T+ L+
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 105 EKAFELYNRMK-LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNI 162
++A +++ RM+ + G +P + LL F + L G+A ++ TYN+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
L+ C + +A LD M +G P + SY+ +I + G +DDA + + + ++G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ P+ Y LIDGF K+ D + A ++++++
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 71 SALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
+A LFD G A +AV + ++ S+ + + ++ + + +
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV 84
Query: 130 LKGFQKQNMLENAYRLLDEAVE-HGIASVV-TYNILLSWLCGLGKVVEACNLLDKMMSKG 187
+K + K +M + A + E G + +YN LL+ + V+ +L + G
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
V P+L +YN +I C+K + A ++ + K+G KP+ +Y+ +I+ K G + A
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 248 GVFEQMMAANANLQITQFTPL 268
+F++M +T + L
Sbjct: 205 ELFDEMSERGVAPDVTCYNIL 225
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M G P TY + G + A + +M++ G+ ++I T L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVT-FSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C LG+I+ L L +++ G N++ SV++ K G +++A L+N+MK G+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + ++ G K + A L DE + I + T+ LL LC G ++EA +L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
LD ++S G T +V YN +I G+ + GC+++A + +++ G+ P+ T+ LI G+ K
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A + + + + +T L
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 137/286 (47%), Gaps = 37/286 (12%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
+E TY++V+ RQ + +A+ + +++ S+M G+C LG ++ A F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+++ G+ P+ + ++LI+ +GS+ +A EL + M G++P L KGF
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 137 NMLENAYRLLDEAVEHGIA-SVVTYNILL------------------------------- 164
M+ A+ ++ + ++ G++ V+TY ILL
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 165 -----SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
S LC G++ EA +L ++M + G++P LV+Y+ +I G C+ G D A + + +
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
K + PN+ T+ L+ G +KG A + + ++++ L I +
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
C +LK G +PS ++ +I G++ EAL L +M GV + + L KG
Sbjct: 246 CTVLK----CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
LLG I+ A ++ ++++ G++P+ +T+++L+ ++G+++ L M G +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 123 VFI-VKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
I +L G K ++ A L ++ G++ +V Y+I++ LC LGK A L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M K + P+ ++ ++LG C+KG + +A S+++ ++ G + + Y +IDG+ K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G E A +F+ ++ + F L
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSL 509
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 13/261 (4%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y VI + G + EAL L ++ +G+ ++ SL+ G+C +I A K+ D I
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G+AP+ V+++ L+D + G+ + EL MK GI PT + KG + E
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 141 NAYRLLDEAV----EHGIASV---------VTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
N +L E + + G+ + +TYN ++ +LC + + A L+ M S+
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ S +YN +I C G + A S + + ++ + + YT LI KGD E A
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 248 GVFEQMMAANANLQITQFTPL 268
+F Q++ N+ I ++ +
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAV 731
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M+A G P Y+ VI + G AL L DEM + + N +L+
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A L D ++ +G + V ++++ID +K G +E+A EL+ + GI P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+V L+ G+ K + A ++LD +G+A SVV+Y L+ G L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMN-RILKK-----------GLKPNAL 228
+M ++G+ P+ V+Y+ I G CR ++ V+ RI +K G+ P+ +
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 229 TYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
TY +I + AF E M + N +
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 15/282 (5%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA L EM +P+ T+ +++ ++G ++EA L D +++SG ++I++ ++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ G I AL+LF ++E G+ P+ TF+ LI K ++ +A ++ + +KL G+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEACNL 179
P+V L+ + ++ L E GI VTY+++ LC G E CN
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNH 594
Query: 180 -------------LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
L M S+G+ P ++YN II CR + A+ + + + L +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ TY LID G +A + N +L +T L
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+ + +L+ SS++ ++ + + +MK + + +L F++ + + + Y+ +
Sbjct: 123 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEI 182
Query: 147 DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
+ EH TY+ ++ LC K+ +A L K + PS+VS+N I+ G+C+ G
Sbjct: 183 KDKNEH------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+D A S +LK GL P+ ++ LI+G G A + M
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G +Q LE+A L + I SVV++N ++S C LG V A + ++ G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ PS+ S+N +I G C G + +A + + + K G++P+++TY L GF G A+
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 248 GVFEQMMAANANLQITQFTPL 268
V M+ + + +T L
Sbjct: 313 EVIRDMLDKGLSPDVITYTIL 333
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 137/286 (47%), Gaps = 37/286 (12%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
+E TY++V+ RQ + +A+ + +++ S+M G+C LG ++ A F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+++ G+ P+ + ++LI+ +GS+ +A EL + M G++P L KGF
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 137 NMLENAYRLLDEAVEHGIA-SVVTYNILL------------------------------- 164
M+ A+ ++ + ++ G++ V+TY ILL
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 165 -----SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
S LC G++ EA +L ++M + G++P LV+Y+ +I G C+ G D A + + +
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
K + PN+ T+ L+ G +KG A + + ++++ L I +
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 2/269 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M G P TY + G + A + +M++ G+ ++I T L+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVT-FSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C LG+I+ L L +++ G N++ SV++ K G +++A L+N+MK G+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P + ++ G K + A L DE + I + T+ LL LC G ++EA +L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
LD ++S G T +V YN +I G+ + GC+++A + +++ G+ P+ T+ LI G+ K
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 240 KGDFERAFGVFEQMMAANANLQITQFTPL 268
+ A + + + + +T L
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 138/268 (51%), Gaps = 6/268 (2%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
C +LK G +PS ++ +I G++ EAL L +M GV + + L KG
Sbjct: 246 CTVLK----CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ-P 121
LLG I+ A ++ ++++ G++P+ +T+++L+ ++G+++ L M G +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
++ +L G K ++ A L ++ G++ +V Y+I++ LC LGK A L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D+M K + P+ ++ ++LG C+KG + +A S+++ ++ G + + Y +IDG+ K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G E A +F+ ++ + F L
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSL 509
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 13/261 (4%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y VI + G + EAL L ++ +G+ ++ SL+ G+C +I A K+ D I
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G+AP+ V+++ L+D + G+ + EL MK GI PT + KG + E
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 141 NAYRLLDEAV----EHGIASV---------VTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
N +L E + + G+ + +TYN ++ +LC + + A L+ M S+
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ S +YN +I C G + A S + + ++ + + YT LI KGD E A
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 248 GVFEQMMAANANLQITQFTPL 268
+F Q++ N+ I ++ +
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAV 731
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M+A G P Y+ VI + G AL L DEM + + N +L+
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G + A L D ++ +G + V ++++ID +K G +E+A EL+ + GI P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+V L+ G+ K + A ++LD +G+A SVV+Y L+ G L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMN-RILKK-----------GLKPNAL 228
+M ++G+ P+ V+Y+ I G CR ++ V+ RI +K G+ P+ +
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 229 TYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
TY +I + AF E M + N +
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 15/282 (5%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA L EM +P+ T+ +++ ++G ++EA L D +++SG ++I++ ++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ G I AL+LF ++E G+ P+ TF+ LI K ++ +A ++ + +KL G+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEACNL 179
P+V L+ + ++ L E GI VTY+++ LC G E CN
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNH 594
Query: 180 -------------LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
L M S+G+ P ++YN II CR + A+ + + + L +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ TY LID G +A + N +L +T L
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
+ + +L+ SS++ ++ + + +MK + + +L F++ + + + Y+ +
Sbjct: 124 GLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK 183
Query: 148 EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ EH TY+ ++ LC K+ +A L K + PS+VS+N I+ G+C+ G
Sbjct: 184 DKNEH------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+D A S +LK GL P+ ++ LI+G G A + M
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G +Q LE+A L + I SVV++N ++S C LG V A + ++ G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ PS+ S+N +I G C G + +A + + + K G++P+++TY L GF G A+
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 248 GVFEQMMAANANLQITQFTPL 268
V M+ + + +T L
Sbjct: 313 EVIRDMLDKGLSPDVITYTIL 333
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+ P+ TYT ++ R N++EA R+ ++M++ G+ +I+ +++G + A+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
KLF + G PN +++++I K SME A E ++ M G+QP + L+ GF
Sbjct: 353 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 134 QKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
Q L+ Y LL E E G TYN L+ + + +KM+ + PS+
Sbjct: 413 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 472
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
++N I+ + + +V + ++KKG+ P+ +YT LI G +G A E+
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
Query: 253 MM 254
M+
Sbjct: 533 ML 534
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M++ G P+ +YT +I +Q ++ A+ D+MV+SG+ + V T L+
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +++ +L E+ E G P+ T++ LI + E +YN+M I+P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ ++K + E + DE ++ GI +Y +L+ L GK EAC L
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKG 206
++M+ KG+ L+ YN R G
Sbjct: 531 EEMLDKGMKTPLIDYNKFAADFHRGG 556
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
TF++ + + +KA ++ MK + V + LL + + + A L D+
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 150 VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
E +++TY +LL+ C + ++EA + + M+ G+ P +V++N ++ G R
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
DA + + + KG PN +YT +I F K+ E A F+ M+
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 394
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+ P+ TYT ++ R N++EA R+ ++M++ G+ +I+ +++G + A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
KLF + G PN +++++I K SME A E ++ M G+QP + L+ GF
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 134 QKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
Q L+ Y LL E E G TYN L+ + + +KM+ + PS+
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 473
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
++N I+ + + +V + ++KKG+ P+ +YT LI G +G A E+
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
Query: 253 MM 254
M+
Sbjct: 534 ML 535
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M++ G P+ +YT +I +Q ++ A+ D+MV+SG+ + V T L+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G +++ +L E+ E G P+ T++ LI + E +YN+M I+P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ ++K + E + DE ++ GI +Y +L+ L GK EAC L
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKG 206
++M+ KG+ L+ YN R G
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGG 557
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
TF++ + + +KA ++ MK + V + LL + + + A L D+
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 150 VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
E +++TY +LL+ C + ++EA + + M+ G+ P +V++N ++ G R
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
DA + + + KG PN +YT +I F K+ E A F+ M+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 131/257 (50%), Gaps = 2/257 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +LL +R G P TY +++ C R N+ A+++ ++M ++ +++
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ G A +LF E+ G P+AVT++ L+ ++ + EK E+Y +M+ MG
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEACN 178
++ + KQ L+ A +L + + +TY +L+ L + VEA
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L+ +M+ G+ P+L +Y+ +I G+ + G ++A + +L+ G KP+ L Y+ ++D
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 239 KKGDFERAFGVFEQMMA 255
+ + +A+G++ M++
Sbjct: 520 RGNETRKAWGLYRDMIS 536
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ M+A G++P+ Y +I + V +A + EM + V + + S++K +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ D ++++ I E G+ P+ T++ LI + E+ + L +M+ +G+ P +
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
K L+ F KQ LE A +L +E + G+ Y+ ++ G +A LL
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M + G+ P+L + + +++ + G +A V++ + ++ L Y+ +ID + + D
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 243 F 243
+
Sbjct: 1118 Y 1118
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
+R G P T+ S++ + G A + + M+ G + L+ C+ G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ + +E+ + G + + +++D ++ G++ + ++Y+ MK G PT+ + +
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
+++ K + +A ++ E E + +N +L + + + ++ G
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+ P +YN +I+ +CR ++ Y +M ++ GL P TY LI F K+ E+A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 248 GVFEQMMAANANL 260
+FE++++ L
Sbjct: 1018 QLFEELLSKGLKL 1030
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI--NSALKLFDE 78
Y +++G R G +A L D M G ++I +L+ G + N A++L D
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ +G+ P+A+T++ L+ S+ +++ A +++ M+ QP ++ ++ + + +
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 139 LENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
A RL E G VTYN LL + + +M G ++YN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLK---PNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
II + ++G +D A + + KGL P+A+TYT LID K A + +M+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 255 AANANLQITQFTPL 268
+ ++ L
Sbjct: 466 DVGIKPTLQTYSAL 479
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L E+ G+ P TY S++ R+ N + + +M G + + +++
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 62 GHCLLGDINSALKLFDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ G ++ AL+L+ ++ +G P+A+T++VLID K +A L + M +GI+
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
PT+ L+ G+ K E A + G + Y+++L L + +A L
Sbjct: 471 PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL 530
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
M+S G TPS Y +ILG ++ DD
Sbjct: 531 YRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 1 MACKLLKEMRAL-GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+A +L K+M+ L G P TYT +I + + VEA L EM++ G+ + ++L
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ G+ G A F ++ +G P+ + +SV++D + KA+ LY M G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE 151
P+ + + ++ G K+N ++ + + + E
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + LK G+ T S++G+ G EA L + + ++ +L+
Sbjct: 592 LAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALI 651
Query: 61 KGHCLLGDINSALKLF--DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
HC + ++++AL + D V ++ + L+ C +A ++++ ++L G
Sbjct: 652 VLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSG 711
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI---ASVVTYNILLSWLCGLGKVVE 175
+ + + K ++ + K E A++++++A G S + +I+ ++ G K+ +
Sbjct: 712 CEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAY--GKQKLWQ 769
Query: 176 -ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
A +++ + G TP L ++N ++ + + GC + A ++ N +++ G P + L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 235 DGFFKKGDFERAFGVFEQM 253
G E + V E++
Sbjct: 830 HALCVDGRLEELYVVVEEL 848
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 103 SMEKAFELYNRMKLMGIQ-PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYN 161
S ++A E++ + L P +V +L + N A + A V YN
Sbjct: 170 SWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD--AYSVMNRIL 219
++ GK +A L+D M +G P L+S+N +I + G + A +++ +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
GL+P+A+TY L+ + + + A VFE M A
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEA 325
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL M LG P + Y +IG R NV +A + +V + ++ T ++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI-------------------- 101
+C L + A LF+++ V P+ VT+SVL++ ++
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTI 703
Query: 102 --------GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
++K + L+ MK I P V LLK ++N L + D
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-LSREMKAFDVK---- 758
Query: 154 IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS 213
V Y +L+ W C +G + EA + D+M+ GV P Y +I C+ G + +A
Sbjct: 759 -PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 214 VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ +R+++ G+KP+ + YT LI G + G +A + ++M+
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 6/263 (2%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+M G P Y+++I + N+ +A+ + ++M+ +N ++ +S+++ +C +G
Sbjct: 316 DMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMG 375
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+ + A LF E E ++ + V ++V D K+G +E+A EL+ M GI P V
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G Q +A+ L+ E G +V YN+L L G EA L M ++
Sbjct: 436 TLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR 495
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
GV P+ V++N +I G G +D A + + K + +A ++ GF G + A
Sbjct: 496 GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAGCLDHA 551
Query: 247 FGVFEQM-MAANANLQITQFTPL 268
F F ++ ++ T FT L
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSL 574
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L KE R Y + G V EA+ L EM G+ ++I T+L+
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G CL G + A L E+ G P+ V ++VL + G ++AFE M+ G++P
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 122 TVFIVKFLLKGFQKQNMLENA---YRLLDEAVEHGIASVV-------------------- 158
T +++G L+ A Y L+ AS+V
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLE 559
Query: 159 ------TYNILLSWLCGLGKVV-EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
Y L + LC + +A +LLD+M GV P Y +I CR + A
Sbjct: 560 FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
++ K + P+ TYT +I+ + + + ++A+ +FE M + + ++ L
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL 676
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
Y V+ + + +A + +M G+ ++ V +++++GH +I A+ +F+++
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
++ N V S ++ C ++G+ +A++L+ + I K +
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
E A L E GIA V+ Y L+ C GK +A +L+ +M G TP +V YN +
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G G +A+ + + +G+KP +T+ +I+G G+ ++A +E +
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 54 IVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
I +++G C I A + ++ + G+ P+ +S +I+ K ++ KA +++N+
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGK 172
M + IV +L+ + + AY L E E I+ V YN+ L LGK
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
V EA L +M KG+ P +++Y +I G C +G DA+ +M + G P+ + Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 233 LIDGFFKKGDFERAFGVFEQM 253
L G G + AF + M
Sbjct: 472 LAGGLATNGLAQEAFETLKMM 492
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L K+M+ +P TYT ++ + L EM V ++ T L+ C
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFYYTVLIDWQC 772
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+GD+ A ++FD+++E+GV P+A ++ LI C K+G +++A +++RM G++P V
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
L+ G + + A +L+ E +E GI
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +EM+A P YT +I + G++ EA R+ D+M+ SGV + T+L+ C
Sbjct: 748 LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCC 807
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+G + A +FD ++E+GV P+ V ++ LI + G + KA +L M GI+PT
Sbjct: 808 KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ +M G P YT++I C + G + EA + D M+ SGV +++ T+L+
Sbjct: 780 AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIA 839
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVL 94
G C G + A+KL E++E G+ P + S +
Sbjct: 840 GCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ-PTVFI 125
G + + F EI G+ +A T+ +++ + E+ +L +R+ + + P VF
Sbjct: 196 GRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFY 255
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-----VTYNILLSWLCGLGKVVEACNLL 180
+ F+ +G M + AY LL + I + Y ++ LC ++ +A +++
Sbjct: 256 LNFI-EGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M G+ P + Y+ II GH + + A V N++LKK + N + + ++ + +
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 241 GDFERAFGVFEQMMAANANLQ 261
G+F A+ +F++ N +L
Sbjct: 375 GNFSEAYDLFKEFRETNISLD 395
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M PS TY ++I C GN EAL + +M ++GV +++ ++
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM--KLMGI 119
+ + AL F+ + A V P+ TF+++I C SK+G +A +L+N M K
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
+P V ++ + + +EN + + V G+ ++V+YN L+ G A +
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+L + G+ P +VSY ++ + R A V + K+ KPN +TY LID +
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 239 KKGDFERAFGVFEQM 253
G A +F QM
Sbjct: 305 SNGFLAEAVEIFRQM 319
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P T+TS++ +G + + + MV G+ NI+ +LM + + G +AL +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+I + G+ P+ V+++ L++ + KA E++ M+ +P V L+ +
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
L A + + + GI +VV+ LL+ K V +L S+G+ + +
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YN I + ++ A ++ + KK +K +++T+T LI G + + A ++M
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ + M A G P+ +Y +++G G AL + ++ +G+ +++ T L+ +
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
A ++F + + PN VT++ LID G + +A E++ +M+ GI+P V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
V LL + N +L A GI + YN + ++ +A L M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
K V V++ +I G CR +A S + + + Y+ ++ + K+G
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
A +F QM A + +T +
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSM 474
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L + MR T+T +I R EA+ EM + +P+ V +S++
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 441
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + A +F+++ AG P+ + ++ ++ + KA EL+ M+ GI+P
Sbjct: 442 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++ F K N + L+D E I + + + S L + A +L+
Sbjct: 502 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 561
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M + S+ N ++ + G ++ + +I+ G+ N TY L++
Sbjct: 562 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 621
Query: 241 GDFERAFGVFEQMMAA 256
G++ + V E M A
Sbjct: 622 GNWRKYIEVLEWMSGA 637
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/253 (17%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ ++M G P+ + +++ C R V + + G+ +N S +
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ ++ A+ L+ + + V ++VTF++LI S ++ +A M+ + I
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
T + +L + KQ + A + ++ G V+ Y +L K +AC L
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M + G+ P ++ + ++ + G + + +M+ + +K + + +
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 551
Query: 241 GDFERAFGVFEQM 253
+++RA + + M
Sbjct: 552 QEWKRAIDLIQMM 564
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 134/261 (51%), Gaps = 3/261 (1%)
Query: 2 ACKLLKEMRALGWI-PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+ +L K M+ W P+E YT +I R+G + + L + DEM + GV ++ T+L+
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG-SMEKAFELYNRMKLMGI 119
+ G ++L+L D + ++P+ +T++ +I+ ++ G E L+ M+ GI
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
QP + LL + + + A + + GI + TY+ L+ L ++ + C+
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
LL +M S G P + SYN ++ + + G + +A V +++ G PNA TY+ L++ F
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 239 KKGDFERAFGVFEQMMAANAN 259
+ G ++ +F +M ++N +
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTD 384
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 4/257 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ EM + G S +YT++I R G +L L D M N + +I+ +++
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA- 220
Query: 64 CLLG--DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G D L LF E+ G+ P+ VT++ L+ + G ++A ++ M GI P
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
+ L++ F K LE LL E G + + +YN+LL G + EA +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M + G TP+ +Y+ ++ + G DD + + P+A TY LI+ F +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 241 GDFERAFGVFEQMMAAN 257
G F+ +F M+ N
Sbjct: 401 GYFKEVVTLFHDMVEEN 417
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L EMR G P TY +++ C +G EA + M + G+ ++ + L++
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L + L E+ G P+ +++VL++ +K GS+++A ++++M+ G P
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 125 IVKFLLKGFQKQNMLENAYRL-LDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
LL F + ++ +L L+ + TYNIL+ G E L M
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ + + P + +Y II + G +DA ++ + + P++ YT +I+ F + +
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
E A F M +N I F L
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSL 498
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
C LL EM + G +P +Y ++ + G++ EA+ + +M +G N + L+
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
G + +LF E+ + P+A T+++LI+ + G ++ L++ M I+P
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLD 181
+ + ++ K + E+A ++L + I S Y ++ EA +
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M G PS+ +++ ++ R G + ++ ++++R++ G+ N T+ I+ + + G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 242 DFERAFGVFEQM 253
FE A + M
Sbjct: 542 KFEEAVKTYVDM 553
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M +G PS T+ S++ + R G V E+ + +V+SG+P N + ++ + G
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
A+K + ++ ++ P+ T ++ S +++ E + MK I P++
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIASVVT---------YNILLSWLCGLGKVVEACNL 179
+L + K ++ LL+E + + ++++ Y+ +W ++VE +
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNW-----QIVEY--V 655
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
LDK+ S+G + YN ++ G + A V+N K+GL P L+
Sbjct: 656 LDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 12/258 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L+ M A +PS YT VI + EAL + M G +I SL+
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLY 500
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + + + +V++G+ N TF+ I+ + G E+A + Y M+ P
Sbjct: 501 SFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ +L + +++ +E I S++ Y ++L+ + + LL
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS------VMNRILKKGLKPNALTYTPLI 234
++M+S + VS H ++G KG DD + V++++ +G Y L+
Sbjct: 621 EEMLS-----NRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 675
Query: 235 DGFFKKGDFERAFGVFEQ 252
D + G ERA V +
Sbjct: 676 DALWWLGQKERAARVLNE 693
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ +M PS TY ++I C GN EAL + +M ++GV +++ ++
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN--RMKLMGI 119
+ + AL F+ + A V P+ TF+++I C SK+G +A +L+N R K
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
+P V ++ + + +EN + + V G+ ++V+YN L+ G A +
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+L + G+ P +VSY ++ + R A V + K+ KPN +TY LID +
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 239 KKGDFERAFGVFEQM 253
G A +F QM
Sbjct: 437 SNGFLAEAVEIFRQM 451
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P T+TS++ +G + + + MV G+ NI+ +LM + + G +AL +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+I + G+ P+ V+++ L++ + KA E++ M+ +P V L+ +
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
L A + + + GI +VV+ LL+ K V +L S+G+ + +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YN I + ++ A ++ + KK +K +++T+T LI G + + A ++M
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ + M A G P+ +Y +++G G AL + ++ +G+ +++ T L+ +
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
A ++F + + PN VT++ LID G + +A E++ +M+ GI+P V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
V LL + N +L A GI + YN + ++ +A L M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
K V V++ +I G CR +A S + + + Y+ ++ + K+G
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
A +F QM A + +T +
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSM 606
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L + MR T+T +I R EA+ EM + +P+ V +S++
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + A +F+++ AG P+ + ++ ++ + KA EL+ M+ GI+P
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L++ F K N + L+D E I + + + S L + A +L+
Sbjct: 634 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 693
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M + S+ N ++ + G ++ + +I+ G+ N TY L++
Sbjct: 694 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 753
Query: 241 GDFERAFGVFEQMMAA 256
G++ + V E M A
Sbjct: 754 GNWRKYIEVLEWMSGA 769
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/253 (17%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ ++M G P+ + +++ C R V + + G+ +N S +
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ ++ A+ L+ + + V ++VTF++LI S ++ +A M+ + I
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
T + +L + KQ + A + ++ G V+ Y +L K +AC L
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M + G+ P ++ + ++ + G + + +M+ + +K + + +
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683
Query: 241 GDFERAFGVFEQM 253
+++RA + + M
Sbjct: 684 QEWKRAIDLIQMM 696
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 2/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M G ++ +++ + V +A L + V+ + ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILN 203
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G CL+ AL++ E+VE G+ PN T++ ++ + G + A+E + MK +
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF ++ A + DE + G+ SV TYN ++ LC V A +
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M+ +G P++ +YN +I G G +M R+ +G +PN TY +I + +
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 241 GDFERAFGVFEQM 253
+ E+A G+FE+M
Sbjct: 384 SEVEKALGLFEKM 396
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 2/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+ MR+L PS T+ V G +A++L M G ++ +++ C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
+ A +LF + + + VT++V+++ I KA E+ M GI P +
Sbjct: 173 KSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+LKGF + + +A+ E + VVTY ++ G++ A N+ D+M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ +GV PS+ +YN +I C+K +++A + ++++G +PN TY LI G F G+F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 244 ERAFGVFEQM 253
R + ++M
Sbjct: 352 SRGEELMQRM 361
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++LKEM G P+ TY +++ R G + A EM ++++ T+++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + G+I A +FDE++ GV P+ T++ +I K ++E A ++ M G +P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L++G L+ G + TYN+++ + +V +A L
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Query: 181 DKMMSKGVTPSLVSYNHIILG 201
+KM S P+L +YN +I G
Sbjct: 394 EKMGSGDCLPNLDTYNILISG 414
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY ++ +AL + EMV G+ N+ +++KG G I A + F E+
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ + VT++ ++ G +++A +++ M G+ P+V +++ K++ +
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
ENA + +E V G +V TYN+L+ L G+ L+ +M ++G P+ +YN +
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
I + ++ A + ++ PN TY LI G F
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%)
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
+ P+ TF+++ + + G +KA +L+ M G + +L K +E AY
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 144 RLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHC 203
L VTYN++L+ C + + +A +L +M+ +G+ P+L +YN ++ G
Sbjct: 182 ELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 204 RKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
R G + A+ + K+ + + +TYT ++ GF G+ +RA VF++M+
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G + A+KLF + E G + +F+ ++D K +EKA+EL+ ++ TV
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TY 198
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+L G+ A +L E VE GI ++ TYN +L G++ A +M
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+ +V+Y ++ G G + A +V + ++++G+ P+ TY +I KK + E
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A +FE+M+ +T + L
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVL 341
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+A +F + ID ++++ + L +RM+ + I P+ + + + + A +L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 147 DEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
EHG + ++N +L LC +V +A L + + + V+YN I+ G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
A V+ ++++G+ PN TY ++ GFF+ G A+ F +M + + + +
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 266 T 266
T
Sbjct: 269 T 269
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 132/267 (49%), Gaps = 3/267 (1%)
Query: 5 LLKEM-RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
L+K+M + G +P + TY ++I + + EAL + G ++ + ++++
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 64 CLLGDINSALKLFDEIVEAG-VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C G ++ A L +E++ G P+ VT++ +++ ++G ++KA +L M G +P
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
LL G + A +++ + EH + + +TY++++ L GK+ EAC+++
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M+ KG P V N ++ CR G +A M L KG N + +T +I GF +
Sbjct: 549 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 608
Query: 242 DFERAFGVFEQMMAANANLQITQFTPL 268
+ + A V + M N + + +T L
Sbjct: 609 ELDAALSVLDDMYLINKHADVFTYTTL 635
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG-VPVNIIVATSLMKGH 63
LK+ + G+ + Y++++ ++G + EA L +EM++ G P +++ T+++ G
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C LG+++ A KL + G PN V+++ L++ + G +A E+ N + P
Sbjct: 465 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ G +++ L A ++ E V G V N+LL LC G+ EA +++
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
++KG ++V++ +I G C+ +D A SV++ + + TYT L+D KKG
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 644
Query: 243 FERAFGVFEQMM 254
A + ++M+
Sbjct: 645 IAEATELMKKML 656
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+L M+ G P+ + I VR + +ALR + M G+ N++ +++
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQ 120
G+C L + A++L +++ G P+ V++ ++ K + + +L +M K G+
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 380
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P L+ K + + A L +A E G + Y+ ++ LC G++ EA +L
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 180 LDKMMSKG-VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+++M+SKG P +V+Y ++ G CR G +D A ++ + G KPN ++YT L++G
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 239 KKG 241
+ G
Sbjct: 501 RTG 503
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 3/245 (1%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
W P+ TY+ ++ R+G + EA + EMV G + L++ C G + A
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
K +E + G A N V F+ +I + ++ A + + M L+ VF L+
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K+ + A L+ + + GI + VTY ++ C +GKV + +L+KM+S+ ++
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI 699
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
YN +I C G +++A +++ ++L+ + +A T L++G+ KKG A+ V +
Sbjct: 700 --YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACR 757
Query: 253 MMAAN 257
M N
Sbjct: 758 MFNRN 762
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 5/264 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M+ G + ++ V+ + R G + +AL++ M +GV N+++ + +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ AL+ + + G+ PN VT++ +I + +E+A EL M G P + +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK-VSYY 351
Query: 129 LLKGF--QKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+ G+ +++ ++E + A EHG + VTYN L+ L EA L
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLIDGFFKKGDFE 244
KG + Y+ I+ C++G M +A ++N +L KG P+ +TYT +++GF + G+ +
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
+A + + M +T L
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTAL 495
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KLL+ M G P+ +YT+++ R G +EA + + N I + +M
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G ++ A + E+V G P V ++L+ + G +A + G
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEA-VEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
V ++ GF + + L+ A +LD+ + + A V TY L+ L G++ EA L+
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
KM+ KG+ P+ V+Y +I +C+ G +DD +++ +++ +
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 38/288 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ M LG P+ Y+S+IG+ +QG VVEA +M+ SG+ + I ++
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G I+ A +L +E+V+ + P++ T++VLI K+G MEK + ++M G+ P
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLS--WLCGLGK-----V 173
V + L+ F K+ + ++ L E+ I + Y LLS W K +
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVI 745
Query: 174 VEACN--LLDKMM----------------------------SKGVTPSLVSYNHIILGHC 203
VE LL +++ K + P+L +N II G+C
Sbjct: 746 VEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYC 805
Query: 204 RKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
G +D+AY+ + + K+G+ PN +TYT L+ + GD E A +FE
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 31 QGNVVEALRLKDEMVN-SGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAV 89
G++ EA+ + D + + +P+ + + SL C G A LFD + G + V
Sbjct: 214 HGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRM--KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
++ L+ K +M A LY RM + + P +F L+ GF K ML+ +
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIF--NTLIHGFMKLGMLDKGRVMFS 331
Query: 148 EAVEHGIAS-VVTYNILLSWLCGLGKVVEACNL-LDKMMSKGVTPSLVSYNHIILGHCRK 205
+ ++ G+ S V TY+I++ C G V A L ++ S+ ++ ++ Y ++I G +K
Sbjct: 332 QMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKK 391
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G MD A ++ R+L G+ P+ +TY L+ K + + A + + ++
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF-DEIVEAGVAPNAVTFSVLIDCSSKI 101
+M+ GV N+ ++ +C G+++ AL+LF + ++ N ++ LI K
Sbjct: 332 QMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKK 391
Query: 102 GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA------ 155
G M+KA +L RM GI P LLK K + L+ A +L +++G
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451
Query: 156 ------------------------SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ V ++ + LC + A + ++KM++ G TP
Sbjct: 452 DDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL 511
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
SYN +I ++ ++D S++N I + P+ TY +++ KK D + AF + +
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 252 QM 253
M
Sbjct: 572 AM 573
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+ ++ L ++P TY V+ ++ + A + D M G+ + + +S++
Sbjct: 534 LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + A + F +++E+G+ P+ + + ++I+ ++ G +++A EL + ++P+ F
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ GF K M+E + LD+ +E G++ +VV Y L+ G + L M
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM 713
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ ++Y ++ G R V+ K+ L + PL+
Sbjct: 714 GENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 35/246 (14%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
L + A G+ PS + + V+ Q +EA +++ G + + L KG C
Sbjct: 154 LDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCG 213
Query: 66 LGDINSALKLFDEIVEAGVAPNAVT-FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G +N A+ + D + P V + L C K G +A L++ M++ G
Sbjct: 214 HGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+ L+K + K N + A RL VE
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFE----------------------------- 304
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+ P + +N +I G + G +D + ++++KKG++ N TY +I + K+G+ +
Sbjct: 305 ---LDPCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 245 RAFGVF 250
A +F
Sbjct: 360 YALRLF 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L M G+ + YT ++ + N+ A+RL MV ++ + +L+ G
Sbjct: 259 LFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFM 318
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY-NRMKLMGIQPTV 123
LG ++ +F ++++ GV N T+ ++I K G+++ A L+ N I V
Sbjct: 319 KLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNV 378
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
L+ GF K+ ++ A LL +++GI +TY +LL L ++ A +L
Sbjct: 379 HCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQS 438
Query: 183 MMSK--GVTPSLVS 194
++ G+ P ++
Sbjct: 439 ILDNGCGINPPVID 452
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
L + A D I+ +G AP+ + S+++D +AF + ++K G ++
Sbjct: 144 LRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWC 203
Query: 126 VKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
K L KG L A +LD + V Y L C G EA L D M
Sbjct: 204 CKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
G V Y ++ +C+ M A + R++++ + + + LI GF K G
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGML 323
Query: 244 ERAFGVFEQMM 254
++ +F QM+
Sbjct: 324 DKGRVMFSQMI 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 103/241 (42%), Gaps = 3/241 (1%)
Query: 31 QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE-IVEAGVAPNAV 89
++ EA + D V++G+ ++ +L++ +G A +++ ++ G+ P++
Sbjct: 73 SSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSS 132
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
++ C K+ ++A +R+ G P+ ++ Q+ A+ ++
Sbjct: 133 VLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQV 192
Query: 150 VEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS-YNHIILGHCRKGC 207
E G + L LCG G + EA +LD + P V+ Y + C++GC
Sbjct: 193 KERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGC 252
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTP 267
+A ++ + + G + + YT L+ + K + A ++ +M+ + L F
Sbjct: 253 AAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNT 312
Query: 268 L 268
L
Sbjct: 313 L 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 45 VNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSM 104
V + N+ + +++ G+C G ++ A + + + G+ PN VT+++L+ + G +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 105 EKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILL 164
E A +L F+ N + V Y+ LL
Sbjct: 846 ESAIDL----------------------FEGTNCEPDQ---------------VMYSTLL 868
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
LC + ++A L+ +M G+ P+ SY ++ C +A V+ + +
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIW 928
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
P ++ +T LI ++ A +F M+ + +L
Sbjct: 929 PRSINHTWLIYILCEEKKLREARALFAIMVQSGRSL 964
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 10/271 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
AC++ ++M+ E TYT +I T R G EA+ L +EM+ G+ +N++ +LM+
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID---CSSKIGSMEKAFELYNRMKLMG 118
++ A+++F +VE G PN T+S+L++ ++ ++ E+ R G
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG 373
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
I +L++ K + A+RL + + +Y +L LCG GK +EA
Sbjct: 374 ------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+L K+ KGV + YN + + + + + ++ K G P+ TY LI F
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ G+ + A +FE++ ++ I + L
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
++G Y+ ++ T + G+V EA RL +M + V S+++ C G A+++
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+I E GV + + ++ + K+ + +L+ +MK G P +F L+ F +
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 137 NMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
++ A + +E +++YN L++ L G V EA +M KG+ P +V+Y
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ ++ + ++ AYS+ +L KG +PN +TY L+D K G A ++ +M
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 119/235 (50%), Gaps = 5/235 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +M + +Y S++ + G +EA+ + ++ GV + ++ ++
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
L I+ LF+++ + G +P+ T+++LI ++G +++A ++ ++ +P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+ K ++ A+ E E G+ VVTY+ L+ +V A +L
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 181 DKMMSKGVTPSLVSYNHIILGHC--RKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
++M+ KG P++V+YN IL C + G +A + +++ ++GL P+++TYT L
Sbjct: 571 EEMLVKGCQPNIVTYN--ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 7/211 (3%)
Query: 42 DEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI 101
D MV S V NI L+ D+ L+L + + + N+ T+ L+ +
Sbjct: 160 DSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAYLRS 216
Query: 102 GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL-DEAVEHGIASVVTY 160
KAF++Y ++ G + +F LL K E A ++ D H TY
Sbjct: 217 RDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTY 273
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
I++ + +GK EA L ++M+++G+T ++V YN ++ + +D A V +R+++
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
G +PN TY+ L++ +G R GV E
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+L+ M G +P TY +IG ++G++ AL L ++M SG P ++I ++++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+ A++ + + ++ G P +T++VL++ + +A E+ M + G P +
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI------------------------------ 154
L+ ++ LE ++ + HG+
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 155 ------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
+V+TYNIL++ LC + A + +M+ + P +V+YN ++ ++G +
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
DDA ++ + P +TY +IDG KKG ++A ++ QM+ A
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDA 448
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
ACKL++ M +P + ++++ R + +A+ + MV SG + I ++
Sbjct: 123 ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIG 182
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G I +AL L +++ +G P+ +T++ +I C G+ E+A + G P
Sbjct: 183 NLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPP 242
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLL-DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
+ L++ + A +L D AVE +VTYN L+++ C G + E +++
Sbjct: 243 FMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVI 302
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++S G+ + V+YN ++ C D+ ++N + + P +TY LI+G K
Sbjct: 303 QHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA 362
Query: 241 GDFERAFGVFEQMM 254
RA F QM+
Sbjct: 363 RLLSRAIDFFYQML 376
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + K+ G P TYT ++ R A+ + ++M G +I+ SL+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C G++ + I+ G+ N VT++ L+ ++ E+ N M P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLL 180
TV L+ G K +L A + +E + +VTYN +L + G V +A LL
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + P L++YN +I G +KG M A + +++L G+ P+ +T LI GF +
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 241 GDFERAFGVFEQ 252
E A V ++
Sbjct: 468 NLVEEAGQVLKE 479
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L++M G P TY S++ R+GN+ E + +++ G+ +N + +L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C + ++ + + + P +T+++LI+ K + +A + + +M P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLL----DEAVEHGIASVVTYNILLSWLCGLGKVVEAC 177
+ +L K+ M+++A LL + G+ +TYN ++ L G + +A
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL---ITYNSVIDGLAKKGLMKKAL 439
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
L +M+ G+ P ++ +I G CR +++A V+ +G TY +I G
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGL 499
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
KK + E A V E M+ T +T +
Sbjct: 500 CKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L M + P+ TY +I + + A+ +M+ +I+ +++
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G ++ A++L + P +T++ +ID +K G M+KA ELY++M GI P
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
+ L+ GF + N++E A ++L E G TY +++ LC ++ A +++
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 183 MMSKGVTPSLVSYNHIILG 201
M++ G P Y I+ G
Sbjct: 515 MLTGGCKPDETIYTAIVKG 533
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G + A KL + + P+ + S L+ ++I ++KA + M + G P
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174
Query: 124 FIVKFLLKGFQKQNMLENAYRLL-DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ K+ + A LL D ++ V+TYN ++ + G +A
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ G P +++Y ++ CR A V+ + +G P+ +TY L++ ++G+
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
E V + +++ L + L
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTL 320
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 159 TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
T N +L LC GK+ +AC L++ M P S ++++ G R +D A ++ +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ G P+ +TY +I KKG A + E M
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVN--SGVPVNIIVATSLMKGHCLLGDINSALKL 75
E + S I R + AL D M G P N+ V +++ G+ GD++ AL+
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRF 215
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ + + P+ TF++LI+ + + A +L+ MK G +P V L++GF
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+E ++ E +E G S T IL+ LC G+V +AC L+ +++K V PS
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
Y ++ C + A +M + KKG P + T L++G K G E+A G E+MM
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 255 AA 256
A
Sbjct: 396 NA 397
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L +EM+ G P+ ++ ++I + G + E +++ EM+ G + L+
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C G ++ A L +++ V P+ + L++ +A E+ + G
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT 365
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
P L++G +K E A +++ + GI VT+N+LL LC +A L
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
SKG P +Y+ ++ G ++G + ++N +L K + P+ TY L+DG
Sbjct: 426 RLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSC 485
Query: 240 KGDFER 245
G F R
Sbjct: 486 TGKFSR 491
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + L++M G + TY ++I C + + L EM G+ V + ++
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G +N +F+ ++ G PN ++VLID +K GS+E A L +RM G +P
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V ++ G K +E A G+A + + Y+ L+ L G+V EA L
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI-LKKGLKPNALTYTPLIDGFFK 239
++M KG T YN +I + +D+A ++ R+ ++G TYT L+ G FK
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 240 KGDFERAFGVFEQMM 254
+ E A +++ M+
Sbjct: 516 EHRNEEALKLWDMMI 530
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P TY ++I + G +A+ +M G + I ++++ D S + L
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ E+ E G+ FS++I K G + + + ++ M G +P V I L+ G+ K
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+E+A RLL ++ G VVTY+++++ LC G+V EA + G+ + +
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
Y+ +I G + G +D+A + + +KG ++ Y LID F K + A +F++M
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ ++M+ G P+ TY ++ V V A R+ + M + + +I+ +++KG+C
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G A++ ++ G + +T+ +I LY M GIQ
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
++ G K+ L Y + + + G +V Y +L+ G V +A LL +M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ +G P +V+Y+ ++ G C+ G +++A + GL N++ Y+ LIDG K G
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 244 ERAFGVFEQM 253
+ A +FE+M
Sbjct: 449 DEAERLFEEM 458
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L +EM G ++ VIG ++G + E + + M+ G N+ + T L+ G+
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + A++L +++ G P+ VT+SV+++ K G +E+A + ++ + G+
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ G K ++ A RL +E E G YN L+ KV EA L +M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 184 -MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+G ++ +Y ++ G ++ ++A + + ++ KG+ P A + L G G
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 243 FERAFGVFEQM 253
RA + +++
Sbjct: 554 VARACKILDEL 564
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P+ YT +I + G+V +A+RL M++ G +++ + ++ G C G + A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
L F G+A N++ +S LID K G +++A L+ M G + L+
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 133 FQKQNMLENAYRLLD--EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
F K ++ A L E E +V TY ILLS + + EA L D M+ KG+TP
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
+ + + G C G + A +++ + G+
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y S++ +V + E+ P+ + A +L+K LG + L ++ ++
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 81 EAGVAPNAVTFSVLID---CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
E G+ P T++ L++ + + S E+ FE+ M+ I+P + ++KG+ K
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV---MESGRIKPDIVTYNTMIKGYCKAG 271
Query: 138 MLENAY-RLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
+ A +L D A +TY ++ L +M KG+ +++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+I G C++G +++ Y+V +++KG KPN YT LIDG+ K G E A + +M+
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL M G+ P TY+ V+ + G V EAL G+ +N + +SL+
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM-GIQ 120
G G ++ A +LF+E+ E G ++ ++ LID +K +++A L+ RM+ G
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-------------------- 160
TV+ LL G K++ E A +L D ++ GI
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 161 ---------------NILLSWLCGLGKVVEACNLLDKMMSKG 187
+++ LC G++ EAC L D + +G
Sbjct: 561 LDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG 602
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G + A +LF GV PN ++++L+ + A++L+ +M + P V
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
K L++GF ++ + A LLD+ + G + ++Y LL+ LC ++ EA LL +M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG P LV YN +ILG CR+ DA V++ +L G PN+++Y LI G +G F+
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 246 AFGVFEQMMA 255
E+M++
Sbjct: 349 GKKYLEEMIS 358
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L K R G +P+ +Y ++ ++ A +L +M+ V ++ L++
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G +N A++L D+++ G P+ ++++ L++ + + +A++L RMKL G P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ GF +++ +A ++LD+ + +G + + V+Y L+ LC G E L
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT---PLI 234
++M+SKG +P N ++ G C G +++A V+ ++K G ++ T+ PLI
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLI 410
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 2/256 (0%)
Query: 8 EMRALGWIPSEGTYTSVIGTCV-RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
+M + P ++ V +G + +A L GV N LM+ CL
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
D++ A +LF +++E V P+ ++ +LI + G + A EL + M G P
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
LL ++ L AY+LL G +V YN ++ C + ++A +LD M+S
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G +P+ VSY +I G C +G D+ + ++ KG P+ L+ GF G E
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 246 AFGVFEQMMAANANLQ 261
A V E +M L
Sbjct: 384 ACDVVEVVMKNGETLH 399
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 46 NSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDC-SSKIGSM 104
+SG P+ + T L+K + L F +++E P + ++D S G +
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 105 EKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILL 164
+KAFEL+ +L G+ P + +YN+L+
Sbjct: 172 QKAFELFKSSRLHGVMP----------------------------------NTRSYNLLM 197
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
C + A L KM+ + V P + SY +I G CRKG ++ A +++ +L KG
Sbjct: 198 QAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV 257
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
P+ L+YT L++ +K A+ + +M N + + +
Sbjct: 258 PDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 71/321 (22%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL++ +LG++P T T V+ +G V EAL + + + + G V+++ +L+KG+C
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
LG + A + F E+ G PN T+++LI +G ++ A + +N MK I+
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 125 IVKFLLKG-------------------------------------FQKQNMLENAYRLL- 146
L++G F K+N E+A L
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 147 --------------------------------DEAV-EHGIASVVTYNILLSWLCGLGKV 173
D+ + E G+ S++ + L+ GK+
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
E+ L++ M+++G P ++N +I+G C++ + + + + ++G P+ +Y PL
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 234 IDGFFKKGDFERAFGVFEQMM 254
++ KGD ++A+ +F +M+
Sbjct: 570 LEELCVKGDIQKAWLLFSRMV 590
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 13 GWIPSEGTYTSVIGT-CV-RQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHCLLGDI 69
G+I S TY ++ CV R+ + V +L DEM +S G+P + + ++++G I
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTV--YQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLI 128
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR-MKLMGIQPTVFIVKF 128
+ + D + + G+ P+ F+ ++D K ++ A E + R M GI V+
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGI 187
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+KG N + + ++LL G+A + V YN LL LC GKV A +L+ +M
Sbjct: 188 LMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-- 245
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P+ V++N +I +C + + + ++ + G P+ +T T +++ +G A
Sbjct: 246 --PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303
Query: 248 GVFEQMMAANANLQI 262
V E++ + + +
Sbjct: 304 EVLERVESKGGKVDV 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 4 KLLKEM-RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
+LL EM ++G P + + ++I R + + + D + G+ ++ V S++
Sbjct: 97 QLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILD- 155
Query: 63 HCLLGDINSALKLFD-EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ DI+ A + F +++ +G+ + T+ +L+ S + F+L MK G+ P
Sbjct: 156 VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAP 215
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ LL K + A L+ E E + VT+NIL+S C K++++ LL+
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISAYCNEQKLIQSMVLLE 272
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
K S G P +V+ ++ C +G + +A V+ R+ KG K + + L+ G+ G
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 242 DFERAFGVFEQM 253
A F +M
Sbjct: 333 KMRVAQRFFIEM 344
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 113/270 (41%), Gaps = 36/270 (13%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + EM G++P+ TY +I G + AL ++M + N +L+
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 61 KGHCLLGDINSALKLF------DEIVEAGVAP-NAVT----------------------F 91
+G + G + LK+ D + A + P N V F
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 92 SVLIDCSSKI------GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRL 145
+D S K+ G M+ Y++M G P++ + L+ + + +E + L
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 146 LDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
+++ V G + T+N ++ C KV+ ++ M +G P SYN ++ C
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
KG + A+ + +R+++K + P+ ++ L+
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 119/293 (40%), Gaps = 46/293 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+ EM+ P++ T+ +I + +++++ L ++ + G +++ T +M+
Sbjct: 236 ARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVME 291
Query: 62 GHCLLGDINSAL-----------------------------------KLFDEIVEAGVAP 86
C G ++ AL + F E+ G P
Sbjct: 292 VLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLP 351
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
N T+++LI +G ++ A + +N MK I+ L++G ++ ++L
Sbjct: 352 NVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL 411
Query: 147 ----DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
D HG A + YN ++ + +A L KM + + P V + ++
Sbjct: 412 EMMQDSDTVHG-ARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISL 468
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
C KG MDD + ++++ +G P+ + LI + + G E + + M+
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L+ +M G++P T+ +VI +Q V+ ++ ++M G + L++
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSK 100
C+ GDI A LF +VE + P+ +S L+ C S+
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQ 610
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 29/296 (9%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + KE R + Y + G V EA L EM + G+ ++I T+L+
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+CL G + AL L DE++ G++P+ +T++VL+ ++ G E+ E+Y RMK G +P
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 122 TVFIVKFLLKGF---QKQNMLENAYRLLDEAVEHGIASVV-------------------- 158
+++G +K E+ + L++ AS V
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLE 551
Query: 159 ------TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
Y L LC G + +A ++L KM + V P +I C+ + +A
Sbjct: 552 YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQ 611
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ + ++++GL P+ TYT +I + + + ++A +FE M + +T L
Sbjct: 612 VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 41/273 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +LL+EM+ G +P YT++I QG VV+AL L DEM+ +G+ ++I L+
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSK------------------- 100
G G L++++ + G PNAVT SV+I+ C ++
Sbjct: 467 GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN 526
Query: 101 ----------IGSMEKAFELYNRMKLMGIQPTVFIVKFL---LKGFQKQNMLENAYRLLD 147
G +KA++ + R++ ++ +V+I F ++G+ LE A+ +L
Sbjct: 527 KASFVKGYCEAGLSKKAYKAFVRLE-YPLRKSVYIKLFFSLCIEGY-----LEKAHDVLK 580
Query: 148 EAVEHGIASVVTY-NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
+ + + + ++ C L V EA L D M+ +G+ P L +Y +I +CR
Sbjct: 581 KMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLN 640
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ A S+ + ++G+KP+ +TYT L+D + K
Sbjct: 641 ELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 125/244 (51%), Gaps = 5/244 (2%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
EM +G+ +VI + N+ EAL D+M+ G+ VN ++ + +++ +C +
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
AL+ F E + + + V ++V D SK+G +E+AFEL MK GI P V
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G+ Q + +A L+DE + +G++ ++TYN+L+S L G E + ++M ++
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G P+ V+ + II G C + +A + + +K + A + G+ + G ++A
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA----SFVKGYCEAGLSKKA 543
Query: 247 FGVF 250
+ F
Sbjct: 544 YKAF 547
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ C L ++ A LFD +VE G+ P+ T++++I ++ ++KA L+ MK G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 119 IQPTVFIVKFLLKGFQKQNMLEN-------------AYRLLDEAVEHGIA-SVVTYNILL 164
I+P V LL + K + + A +L E GI VV Y +L+
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
C + + +A L D+M+ G+ P +V+Y +I + RKG +D A +++ + KK
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEA--LRLKDEMVNSGVPVNIIVATS 58
M L K+++ LG +E TY V+ R+GN+ EA L +++E ++ +
Sbjct: 199 MLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE--------SVFGYKT 250
Query: 59 LMKGHCLLGDINSALKLFDEIVE----AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
+ G C+ G+ A+ L E+++ AG AV V+ +++ M+ A + M
Sbjct: 251 FINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEM-KMKAAESVIIEM 309
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
+ +G V+ ++ + K L A LD+ + G+ + V +++L C +
Sbjct: 310 EEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMC 369
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+EA + + V YN + G +++A+ ++ + +G+ P+ + YT L
Sbjct: 370 LEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTL 429
Query: 234 IDGFFKKGDFERAFGVFEQMM 254
IDG+ +G A + ++M+
Sbjct: 430 IDGYCLQGKVVDALDLIDEMI 450
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 37/286 (12%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLLK+ +P + + VI V+ V A+ L ++V +G+ ++ ++++G
Sbjct: 426 KLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C G +LKL E+ +AGV P+ T + + C ++ A +L +M+ G +P +
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWI 544
Query: 124 FIVKFLLKGFQKQNMLENAYRLLD------------------------EAVEHGI----- 154
FL+K + +A + LD E V+ G+
Sbjct: 545 KHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Query: 155 -------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
V+ Y++L+ LC + +EA L ++M+SKG+ P++ +YN +I G C++G
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+D S + R+ + P+ +TYT LI G G A + +M
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LLK+MR G+ P T ++ G V+A + D++ G +++ +T+ +
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G ++ L+LF +I G P+ + + VLI K +A L+N M G++P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLL 180
TV ++ G+ K+ ++ + E V+TY L+ LC G+ EA
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
++M K P+ +++ +I G C+ G +A + +K ++P++ Y L+ F
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 241 GDFERAFGVFEQMM 254
+ FG+F +M+
Sbjct: 768 ENINAGFGIFREMV 781
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 59/315 (18%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
LKEMR G+ + T T V+ G AL + +E+++ G ++ ++T L+ C
Sbjct: 202 LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCK 260
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
G ++ A +L + + E + N T+ VLI K ++KAF+L+ +M+ MG+ + +
Sbjct: 261 WGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL 320
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGK------------- 172
L+ G K LE A L E GI IL LC +
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPP--DRGILGKLLCSFSEESELSRITEVIIG 378
Query: 173 -----------------------VVEACNLLDKMM------------------SKGVTPS 191
V EA + + +M +K + P
Sbjct: 379 DIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD 438
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
S + +I + +D A ++++ I++ GL P + Y +I+G K+G E + +
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLG 498
Query: 252 QMMAANANLQITQFT 266
+M +A ++ +QFT
Sbjct: 499 EM--KDAGVEPSQFT 511
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI-QPTVFIVKFLLKGFQKQNM--LE 140
++P A F I C G +++A +++R++ MG+ P + LL+ K N +E
Sbjct: 139 MSPGA--FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVE 196
Query: 141 NAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
L E + G T +L C GK A ++ ++++S+G +S ++
Sbjct: 197 LVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILV 255
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
+ C+ G +D A+ ++ + ++ ++ N TY LI GF K+ ++AF +FE+M N
Sbjct: 256 VSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMN 315
Query: 260 LQITQFTPL 268
I + L
Sbjct: 316 ADIALYDVL 324
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 52/306 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L ++MR +G Y +IG + ++ AL L E+ SG+P + + L+
Sbjct: 302 AFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC 361
Query: 62 G-----------HCLLGDIN--SALKLFDEIVEA-------------------------- 82
++GDI+ S + L+ + E
Sbjct: 362 SFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV 421
Query: 83 ------------GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLL 130
+ P++ + S++I+C K ++ A L + + G+ P + ++
Sbjct: 422 SEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNII 481
Query: 131 KGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
+G K+ E + +LL E + G+ S T N + L V A +LL KM G
Sbjct: 482 EGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFE 541
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGV 249
P + ++ C G DA ++ + +G + + T IDG K +R +
Sbjct: 542 PWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLEL 601
Query: 250 FEQMMA 255
F + A
Sbjct: 602 FRDICA 607
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 2 ACKLLKEMRALGW-IPSEGTYTSVIGTCVRQGN----VVEALRLKDEMVNSGVPVNIIVA 56
A + +R +G +P+ TY ++ + + +VEA RLK EM + G +
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEA-RLK-EMRDCGFHFDKFTL 217
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
T +++ +C G AL +F+EI+ G ++ ++L+ K G ++KAFEL ++
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEE 276
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEA 176
I+ L+ GF K++ ++ A++L +
Sbjct: 277 RDIRLNYKTYCVLIHGFVKESRIDKAFQLFE----------------------------- 307
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
KM G+ + Y+ +I G C+ ++ A S+ I + G+ P+ L+
Sbjct: 308 -----KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCS 362
Query: 237 FFKKGDFER 245
F ++ + R
Sbjct: 363 FSEESELSR 371
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 109/203 (53%), Gaps = 1/203 (0%)
Query: 54 IVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
+V L+KG+ LG + ++F E++++G + + VT + L++ K+ ME +++Y+
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGK 172
M +GI P + L F + L++ E G +VTYN L+S C G+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
+ EA L M + V P LV+Y +I G C+ G + +A+ +R++ +G+KP+ ++Y
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 233 LIDGFFKKGDFERAFGVFEQMMA 255
LI + K+G +++ + +M+
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLG 369
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
W P + ++ ++ G V E R+ E+++SG V+++ L+ G L +
Sbjct: 163 NWDPV--VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDC 220
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+++ + G+ PN TF++L + + + + +M+ G +P + L+
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 133 FQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ ++ L+ A+ L + +VTY L+ LC G+V EA +M+ +G+ P
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+SYN +I +C++G M + +++ +L + P+ T +++GF ++G
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L++M G+ P TY +++ + R+G + EA L M V +++ TSL+KG C
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + A + F +V+ G+ P+ ++++ LI K G M+++ +L + M + P F
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 125 IVKFLLKGFQKQNMLENAY-----------------------------------RLLDEA 149
K +++GF ++ L +A LLD
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 150 VEH--GIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+E A TYN L+ L + EA L K+ ++ +Y +I CR G
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
+A S+M + +KP++ L+ G+ K+ DF++A
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 2/240 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M +G P+ T+ + N E ++M G +++ +L+ +C G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ A L+ + V P+ VT++ LI K G + +A + ++RM GI+P
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+ + K+ M++ + +LL E + + + T +++ G+++ A N + ++
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL-KKGLKPNALTYTPLIDGFFKKGDFERA 246
V + +I+ C++G A +++RI+ ++G + TY LI+ + E A
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 38/287 (13%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L K M +P TYTS+I + G V EA + MV+ G+ + + +L+ +C
Sbjct: 293 LYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC 352
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G + + KL E++ V P+ T V+++ + G + A ++ + +
Sbjct: 353 KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFE 412
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVE--------------------------------- 151
+ FL+ ++ A LLD +E
Sbjct: 413 VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGK 472
Query: 152 ----HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ + TY L+ LC +G+ EA +L+ +M V P ++ G+C++
Sbjct: 473 LKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELD 532
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG-DFERAFGVFEQM 253
D A +++ + + +Y L+ + G +++A + E+M
Sbjct: 533 FDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERM 579
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M +G P TY ++ + A + EMV SG+ ++ L+K HC +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ + +E + V++S LI+ + + KA+ L+ M+ G+ V
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+K F ++ A +LLD+ E G++ + Y +L LC G V +A + + M+
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
+TP +SYN +I G CR G + +A + + K P+ LT+ +I G + A+
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 248 GVFEQMM 254
V++QMM
Sbjct: 486 KVWDQMM 492
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P +YT +I R G V +A+ + + M+ SGV + +L+ G C ++ A
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 73 LKLF-DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
++ +EI A V + V ++ LI K G +EKA L + M +G +P + LL
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 132 GFQKQNMLENAYRLLDEAVEHGI------------------------------------A 155
+ NML+ A ++ E V GI
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
VV+Y+ L+ C +A L ++M KG+ ++V+Y +I R+G A ++
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+++ + GL P+ + YT ++D K G+ ++A+GVF M+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
++KEM G+ +Y+++I T R N +A RL +EM G+ +N++ TSL+K
Sbjct: 313 MVKEMEPRGFCDVV-SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+ + A KL D++ E G++P+ + ++ ++D K G+++KA+ ++N M
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM---------- 421
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+EH I ++YN L+S LC G+V EA L + M
Sbjct: 422 -------------------------IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
K P +++ II G R + AY V ++++ KG
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 9/238 (3%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y ++I + G + +A LK M G +++ L+ + + A + E+V
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF--IVKF--LLKGFQKQ 136
+G+ +A +++ L+ ++ +K YN M + ++P F +V + L++ F +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFM-VKEMEPRGFCDVVSYSTLIETFCRA 338
Query: 137 NMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+ AYRL +E + G + +VVTY L+ G A LLD+M G++P + Y
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
I+ C+ G +D AY V N +++ + P+A++Y LI G + G A +FE M
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL +M LG+IP + + R+ V A++ MV G +++ T L+ G
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY-NRMKLMGIQPTV 123
G + A+++++ ++ +GV+P+ + L+ ++ A+E+ +K ++ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
+ L+ GF K +E A L + G +VTYN+LL++ + A ++ +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M+ G+ SYN ++ HCR D Y+ M + ++ + ++Y+ LI+ F + +
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 243 FERAFGVFEQMMAANANLQITQFTPL 268
+A+ +FE+M + + +T L
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSL 366
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 85/153 (55%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +EMR G + + TYTS+I +R+GN A +L D+M G+ + I T+++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G+++ A +F++++E + P+A++++ LI + G + +A +L+ MK P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
KF++ G + L AY++ D+ ++ G
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A KLL +M LG P YT+++ + GNV +A + ++M+ + + I SL+
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
G C G + A+KLF+++ P+ +TF +I + + A++++++M
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 130/255 (50%), Gaps = 2/255 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
+ K+ ++M+ LG + +Y S+ +R+G + A R ++MV+ GV ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G L + +AL+ F+++ G++P+ TF+ +I+ + M++A +L+ MK I P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
+V ++KG+ + +++ R+ +E GI + TY+ LL LC GK+VEA N+L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 181 DKMMSKGVTPSLVS-YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
MM+K + P S + +++ + G M A V+ + + A Y LI+ K
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 240 KGDFERAFGVFEQMM 254
+ RA + + ++
Sbjct: 444 ASAYNRAIKLLDTLI 458
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG 102
+M GVP + + L++ + G + ++K+F ++ + GV +++ L + G
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYN 161
A +N+M G++PT +L GF LE A R ++ GI+ T+N
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
+++ C K+ EA L +M + PS+VSY +I G+ +DD + +
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
G++PNA TY+ L+ G G A + + MMA +
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + ++M+ G P + T+ ++I R + EA +L EM + + +++ T+++K
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID------------------------- 96
G+ + ++ L++F+E+ +G+ PNA T+S L+
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Query: 97 -----------CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRL 145
SK G M A E+ M + + L++ K + A +L
Sbjct: 394 KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKL 453
Query: 146 LDEAVEHGI---------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
LD +E I YN ++ +LC G+ +A L ++M +GV + N
Sbjct: 454 LDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ-DALN 512
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
++I GH ++G D +Y ++ + ++G+ + Y LI + KG+
Sbjct: 513 NLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGE 558
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 60 MKGHCLLGDI---NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
MK +LG++ N A + ++ E GV + F VLI+ K G ++++ +++ +MK
Sbjct: 154 MKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD 213
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVV-TYNILLSWLCGLGKVVE 175
+G++ T+ L K ++ A R ++ V G+ TYN++L W L +E
Sbjct: 214 LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML-WGFFLSLRLE 272
Query: 176 -ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
A + M ++G++P ++N +I G CR MD+A + + + P+ ++YT +I
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 235 DGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
G+ + +FE+M ++ T ++ L
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+ + ++I ++GN + + M GVP L+K + G+ A
Sbjct: 505 VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKT 564
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM--KLMGIQPTVFIVKFLLKG 132
D +VE G P++ F +I+ + G ++ A + M K +GI+ + ++ +L+
Sbjct: 565 ALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEA 624
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
+ +E A +D ++G + LLS L GK + A LLD + + ++
Sbjct: 625 LLMRGHVEEALGRIDLLNQNG--HTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEF 682
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
SY+ ++ G +AYSV+ +I++KG + + LI ++G+ ++A
Sbjct: 683 SSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ ++I V G + +A D + + N + L+KG D +A K+FDE+
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+E V P+ VT++ LI + M KA L M I+P L+KG +
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A +L+ + G +V Y IL+S L G++ EA LL +M + + P +V YN +
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ C + + +AY V+ + KG KPNA TY +IDGF + DF+ V M+A+
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS 390
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
ACK+ EM + PS TY S+IG R ++ +A L ++M+ + N + LMK
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+ N A KL ++ G P V + +L+ K G +++A L MK I+P
Sbjct: 265 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
VV YNIL++ LC +V EA +L
Sbjct: 325 ----------------------------------DVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M KG P+ +Y +I G CR D +V+N +L P T+ ++ G K G
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Query: 242 DFERAFGVFEQMMAAN 257
+ + A V E M N
Sbjct: 411 NLDHACFVLEVMGKKN 426
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGN---VVEALRLKDEMVNSGVPVNIIVATS 58
A L + + +G+ +Y+S+I + N V + LRL + V +
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRL---VRYRNVRCRESLFMG 121
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L++ + G ++ A+ +F +I + + LI+ G +EKA ++ K M
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
++P L+KGF + E A ++ DE +E + SVVTYN L+ +LC + +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+LL+ M+ K + P+ V++ ++ G C KG ++A +M + +G KP + Y L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 238 FKKGDFERA 246
K+G + A
Sbjct: 302 GKRGRIDEA 310
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P T+ +I R G V A ++ D M +G N+ ++LM G C +G I A
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ FDE+ + G+ + V ++ L++C + G ++A +L MK + +L+G
Sbjct: 323 KQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ E A ++LD+ G+ + +Y I+L+ LC G++ +A L M +G+ P
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
++N +++ C G + V+ L+ GL P ++ +++ K+ F + +
Sbjct: 443 HATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLD 502
Query: 252 QMMA 255
+++
Sbjct: 503 SLVS 506
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 46 NSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVA-PNAVTFSVLIDCSSKIGSM 104
N G+ N + L+K HC GDIN A + +E+ +G++ PN++T+S L+DC
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 105 EKAFELYNRM-KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNI 162
++A EL+ M GI P ++ GF + +E A ++LD ++G +V Y+
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
L++ C +GK+ EA D++ G+ V Y ++ CR G D+A ++ +
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 223 LKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
+ + LTY ++ G +G E A + +Q + +L
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Query: 5 LLKEMRALG-WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVN-SGVPVNIIVATSLMKG 62
+++EM+ G P+ TY++++ EA+ L ++M++ G+ + + ++ G
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C G++ A K+ D + + G PN +S L++ K+G +++A + ++ +K G++
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
L+ F + + A +LL E A +TYN++L L G+ EA +LD
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ S+GV + SY I+ C G ++ A ++ + ++G+ P+ T+ L+
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 13/265 (4%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI-NS 71
G+ + TY+ ++ VR + + +M + +LM+ H D+ +
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR-HFSRSDLHDK 142
Query: 72 ALKLFDEI-VEAGVAP--NAVT--FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
+++F+ I V A V P NA++ ++LID S ++ ++ + LY + L G+QP I
Sbjct: 143 VMEMFNLIQVIARVKPSLNAISTCLNLLID-SGEV-NLSRKLLLYAKHNL-GLQPNTCIF 199
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA--SVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+K K + A+ +++E GI+ + +TY+ L+ L + EA L + M+
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 185 SK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
SK G++P V++N +I G CR G ++ A +++ + K G PN Y+ L++GF K G
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 244 ERAFGVFEQMMAANANLQITQFTPL 268
+ A F+++ L +T L
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTL 344
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 39/293 (13%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+ KEM +LG++ + T+ VI + ++ + EAL + M+ GV N++ ++ G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 64 CLLGDINSALKLFDEI-VEAG--VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C GD+ AL+L ++ + +G V+PNAVT++ +I+ K G ++ A + M G+
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
L+ + + + A RL DE G + + V YN ++ WL G + A ++
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK------------------ 221
L M SK + + ++ G CR G + +A +I +K
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 222 -----------------GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
GL +A+++ LIDG+ K+G ERA +++ M+ N
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 5/246 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L++M + T V+ R G V EA+ + ++ + +I+ +LM
Sbjct: 380 AMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMH 439
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ A ++ ++ G++ +A++F LID K G +E+A E+Y+ M M
Sbjct: 440 HFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTS 499
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ I ++ G K+ M A +++ A+E I +VTYN LL+ G V EA ++L
Sbjct: 500 NLVIYNSIVNGLSKRGMAGAAEAVVN-AME--IKDIVTYNTLLNESLKTGNVEEADDILS 556
Query: 182 KMMSKG--VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
KM + + SLV++N +I C+ G + A V+ ++++G+ P+++TY LI F K
Sbjct: 557 KMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Query: 240 KGDFER 245
E+
Sbjct: 617 HRSQEK 622
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++++ RA G+ S + +G + + ++ EM + G N+ ++
Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIY 226
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG--- 118
C + AL +F +++ GV PN V+F+++ID + K G M A +L +M +M
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNF 286
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEAC 177
+ P ++ GF K L+ A R+ + V+ G+ + TY L+ G EA
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
L D+M SKG+ + V YN I+ +G ++ A SV+ + K ++ + T ++ G
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 238 FKKGDFERA 246
+ G + A
Sbjct: 407 CRNGYVKEA 415
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L++ +A G P + S++ C + G+ A + ++ G V++ + M C
Sbjct: 137 LIRSYQACGSSPD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMG--C 192
Query: 65 LLG--DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
LL +I+ K++ E+ G N TF+++I K + +A ++ RM G+ P
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-------VVTYNILLSWLCGLGKVVE 175
V ++ G K + A +LL + G+ S VTYN +++ C G++
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKM---GMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A + M+ GV + +Y ++ + R G D+A + + + KGL N + Y ++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFT 266
F +GD E A V M + N+QI +FT
Sbjct: 370 WLFMEGDIEGAMSVLRDMNS--KNMQIDRFT 398
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TY SVI + G + A R++ +MV SGV N +L+ + G + AL+L
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
DE+ G+ N V ++ ++ G +E A + M +Q F +++G +
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 136 QNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
++ A + E + +V +N L+ K+ A +L M+ +G++ +S
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+ +I G+ ++G ++ A + + ++K N + Y +++G K+G
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG 515
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNI-IVATSLMKGH-CLLGDINSALKLFD 77
TY +++ ++ GNV EA + +M ++ +V ++M H C G A ++
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+VE GV P+++T+ LI SK S EK EL++ + L G+ P
Sbjct: 594 FMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+ LK+M G + S +Y +VI + + A EM + G+ N++ + + G+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ GD+ + ++++ G P+ +TFS++I+C + ++ AF+ + M GI+P
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP-- 528
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ +TYNIL+ C G + L KM
Sbjct: 529 --------------------------------NEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
G++P L +YN I C+ + A ++ +L+ GLKP+ TY+ LI + G
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Query: 244 ERAFGVFEQM 253
A +F +
Sbjct: 617 SEAREMFSSI 626
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+ L+++ G+IP T+ + + ++ ++VE R+ D V+ GV L++
Sbjct: 341 QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ + ++ G+ + +++ +IDC K +E A M+ GI P +
Sbjct: 401 LNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNL 460
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
L G+ + ++ + +L++ + HG V+T++++++ LC ++ +A + +
Sbjct: 461 VTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKE 520
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M+ G+ P+ ++YN +I C G D + + ++ + GL P+ Y I F K
Sbjct: 521 MLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRK 580
Query: 243 FERAFGVFEQMM 254
++A + + M+
Sbjct: 581 VKKAEELLKTML 592
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 40/299 (13%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
++MR+ G P TY +I ++G V EA+RL +M G N+ T L+ G +
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
G ++ ALK + + + PN T + + KAFE+ + M +
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL--VGFMEKDSNLQR 320
Query: 126 VKF--LLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
V + +L +M + + L + E G I T+N +S L +VE C + D
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 183 MMSKGVTP-----------------------------------SLVSYNHIILGHCRKGC 207
+S+GV P S+ SYN +I C+
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+++A + + +G+ PN +T+ + G+ +GD ++ GV E+++ + F+
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L EM+ G P+ T+ + + +G+V + + ++++ G ++I + ++
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C +I A F E++E G+ PN +T+++LI G +++ +L+ +MK G+ P
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSP 563
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ ++ F K ++ A LL + G+ TY+ L+ L G+ EA +
Sbjct: 564 DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Query: 181 DKMMSKGVTP 190
+ G P
Sbjct: 624 SSIERHGCVP 633
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
+++L EI ++G + VLI ++G + +++ ++ +G++P+ + ++
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 132 GFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
K N L+ AY + M S G P
Sbjct: 189 ALVKSNSLDLAYLKFQQ----------------------------------MRSDGCKPD 214
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+YN +I G C+KG +D+A ++ ++ ++G +PN TYT LIDGF G + A E
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 252 QMMAANAN 259
M N
Sbjct: 275 MMRVRKLN 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 6 LKEMRALGWIPS-------EGTYTSVIGTCV-RQGNVVEALRLKDEMVNSGVPVNIIVAT 57
L +R W+ + + + SV+G + R+G ++ ++ L E+ +SG ++ +
Sbjct: 90 LHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMC 149
Query: 58 SLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
L+ LG +F +I G+ P+ ++ +ID K S++ A+ + +M+
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEA 176
G +P F L+ G K+ +++ A RL+ + + G +V TY IL+ G+V EA
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCR 204
L+ M + + P+ + + G R
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFR 297
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 6/260 (2%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P + T + + G V EA L E+ P + L+K C D++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 73 LKLFDEIVEA-GVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
+ DE+ + V P+ V+F++LID C+SK ++ +A L +++ G +P F+ +
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSK--NLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 130 LKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+KGF + A + + E G+ +TYN L+ L G+V EA L M+ G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
P +Y ++ G CRKG A S++ + +G PN TY L+ G K ++
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 249 VFEQMMAANANLQITQFTPL 268
++E M ++ L+ + L
Sbjct: 392 LYEMMKSSGVKLESNGYATL 411
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + K+M+ G P + TY ++I + G V EA MV++G + TSLM
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G+ AL L +E+ G APN T++ L+ K M+K ELY MK G++
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVE 175
L++ K + AY + D AV+ ++ Y+ L + L L K E
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 4 KLLKEMRA-LGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
+ + EMR P ++T +I N+ EA+ L ++ N+G + + ++MKG
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C L + A+ ++ ++ E GV P+ +T++ LI SK G +E+A M G +P
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
L+ G ++ A LL+E G A + TYN LL LC + + L +
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
M S GV Y ++ + G + +AY V + + +A Y+ L
Sbjct: 395 MMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 47 SGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA--GVAPNAVTFSVLID--CSSKIG 102
S +P+++ S+++ + + +N +KLF I+++ P TF +L+ C +
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYN 161
S+ + N M G++P ++ + ++ A L+ E E H TYN
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
LL LC + +D+M V P LVS+ +I C + +A +++++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G KP+ Y ++ GF A GV+++M
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 10 RALGWIPSEGTYTSVIGTC--VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+ + P + +Y +++ + V+Q ++E + +M+ G +++ L+ + LG
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWV--YKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
++ +LFDE+ G +P++ T+++L+ K A N MK +GI P+V
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G + LE LDE V+ G VV Y ++++ G++ +A + +M K
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G P++ +YN +I G C G +A ++ + +G PN + Y+ L+ K G A
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEA 448
Query: 247 FGVFEQMM 254
V +M+
Sbjct: 449 RKVIREMV 456
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
K+M G+ P TY ++ T R G + RL DEM G + L+ +L
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH---IL 299
Query: 67 GDIN---SALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G N +AL + + E G+ P+ + ++ LID S+ G++E + M G +P V
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ G+ L+ A + E G + +V TYN ++ LC G+ EAC LL +
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG----LKPNALTY 230
M S+G P+ V Y+ ++ + G + +A V+ ++KKG L P + Y
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
++ +++E G +P+ +T+++L+ + ++G M++ L++ M G P + LL
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN-LLDKMMSKGVTPSL 192
K N A L+ E GI SV+ Y L+ L G + EAC LD+M+ G P +
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDV 359
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
V Y +I G+ G +D A + + KG PN TY +I G G+F A + ++
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 253 MMAANANLQITQFTPL 268
M + N ++ L
Sbjct: 420 MESRGCNPNFVVYSTL 435
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
LMK G+ + +L DE+V+ G A TF++LI + G ++A + + K
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFN 214
Query: 119 IQPTVFIVKFLLK---GFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVV 174
+P +L G ++ ++E Y+ + +E G + V+TYNILL LGK+
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYK---QMLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 175 EACNLLDKMMSKGVTPSLVSYNHI--ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
L D+M G +P +YN + ILG K A + +N + + G+ P+ L YT
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA--ALTTLNHMKEVGIDPSVLHYTT 329
Query: 233 LIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
LIDG + G+ E ++M+ A + +T
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 1/216 (0%)
Query: 39 RLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCS 98
RL DEMV G P L+ G A+ F + P +++ +++
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSL 229
Query: 99 SKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SV 157
+ + +Y +M G P V LL + ++ RL DE G +
Sbjct: 230 LGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDS 289
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNR 217
TYNILL L K + A L+ M G+ PS++ Y +I G R G ++ ++
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDE 349
Query: 218 ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++K G +P+ + YT +I G+ G+ ++A +F +M
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L M+ +G PS YT++I R GN+ DEMV +G +++ T ++
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ + G+++ A ++F E+ G PN T++ +I G +A L M+ G P
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
+ L+ +K L A +++ E V+ G
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 33 NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFS 92
N+ A L + + GV ++I +L+KG+ I+ A + + EAG+ P+ T++
Sbjct: 28 NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYN 87
Query: 93 VLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
LI ++K + + +L++ M G+ P ++ L+ + K A+++L E +
Sbjct: 88 SLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHL 147
Query: 153 G--IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
+ + TYNILL LC G A L + S+ V P L++YN +I G C+ +
Sbjct: 148 AGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGS 206
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+M + K G PNA+TYT ++ +FK E+ +F +M
Sbjct: 207 VDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + MR G P TY S+I + + L+L DEM++SG+ ++ +LM
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 62 GHCLLGDINSALKLFDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ LG A K+ E + AG+ P T+++L+D K G + A EL+ +K ++
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVK 185
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + L+ G K + + ++ E + G + VTY +L ++ + L
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP-NALTYTPLIDGFF 238
KM +G T + ++ + G ++AY M+ +++ G + + ++Y L++ +F
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 239 KKGDFERAFGVFEQM 253
K G+ + + E++
Sbjct: 306 KDGNLDAVDDLLEEI 320
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 4/255 (1%)
Query: 2 ACKLLKE-MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A K+L E + G +P TY ++ + G+ A+ L + S V ++ L+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILI 195
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G C + S + E+ ++G PNAVT++ ++ K +EK +L+ +MK G
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLGKVVEACN 178
F ++ K E AY + E V G S +V+YN LL+ G + +
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
LL+++ KG+ P ++ I+ G G A + I + G++P+ +T LIDG
Sbjct: 316 LLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLC 375
Query: 239 KKGDFERAFGVFEQM 253
K G +RA +F M
Sbjct: 376 KAGHVDRAMRLFASM 390
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
G++ + SV C K ++E+A L +G+ P V L+KG+ + ++ A
Sbjct: 10 GISTKLLNISVNSLC--KFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 143 YRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
Y + E GI V TYN L+S + L D+M+ G++P + SYN ++
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 202 HCRKGCMDDAYSVMNR-ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + G +A+ +++ I GL P TY L+D K G + A +F+ +
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
NI ++ LC + A LL + GV P +++YN +I G+ R +D+AY+V R+ +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
G++P+ TY LI G K R +F++M+ + + + + L
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVA-TSLMKG 62
+L +M+ G+ +V+ ++ G EA E+V SG IV+ +L+
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ G++++ L +EI G+ P+ T +++++ IG+ A + + MG+QP+
Sbjct: 304 YFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPS 363
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
V L+ G K ++ A RL + TY ++ LC G++V A LL
Sbjct: 364 VVTCNCLIDGLCKAGHVDRAMRLF---ASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLS 420
Query: 183 MMSKGVT-PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
+KG+ PS S +L R+ A + +K ++ N L Y
Sbjct: 421 CYNKGMKIPS--SARRAVLSGIRETVSYQAARKTHIKIKAAIECNTLMY 467
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P E TYT+V+ V G + A ++ EM GVP N I L+KG+C I+ A L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 76 FDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
E+ E AG+ P+ V+++++ID I A +N M+ GI PT L+K F
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 135 KQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ A R+ D + M V L++
Sbjct: 570 MSGQPKLANRVFD---------------------------------EMMNDPRVKVDLIA 596
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+N ++ G+CR G ++DA V++R+ + G PN TY L +G
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG 638
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 85 APNAVTFSVLIDC---SSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
AP++ ++ L+ + ++ + E R P ++ F +++
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 142 AYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHII 199
A ++L E G+ A+ +TYN+LL C ++ A +LL +M G+ P +VSYN II
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 200 LGHCRKGCM--DD---AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
GC+ DD A + N + +G+ P ++YT L+ F G + A VF++MM
Sbjct: 531 -----DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSG-VPVNIIVATSLM 60
A EMR G P++ +YT+++ G A R+ DEM+N V V++I L+
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK 115
+G+C LG I A ++ + E G PN T+ L + S+ A L+ +K
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 2 ACKLLKEM-RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A LL+EM G P +Y +I C+ + AL +EM G+ I T+LM
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 61 KGHCLLGDINSALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
K + G A ++FDE++ + V + + +++L++ ++G +E A + +RMK G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
P V L G + +A L E E
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y+ V+ ++G++V A ++ DEM+ G N V T ++ C GD+ A +L E+
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
E+GV+P TF+ LI ++ G EK E M G+ P+ ++K K +
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 141 NAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A +L ++++ G + TY+ L+ + +A L +M + ++P + +I
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLI 486
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+G C G ++ + + K+ ++PNA Y LI F K GD A V+ +M++
Sbjct: 487 VGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+E T +I ++G + E + L D + ++IV TSL+ I ++ L
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
++ + + + +S+++ +K G + A ++++ M G F+ ++ +
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 136 QNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ ++ A RLL E E G++ T+N L+ G + + M+++G+ PS +
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+N ++ + ++ A ++ + + KG P+ TY+ LI GF + D ++A +F +M
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 85 APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYR 144
+ + F +L+ C +KI +E F+++ R+ G +V + L+ K + + +R
Sbjct: 161 SSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWR 220
Query: 145 LLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHC 203
+ + A++ I + +T I++ LC G++ E +LLD++ K PS++ ++
Sbjct: 221 IYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVL 280
Query: 204 RKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ ++++ S++ R+L K + + + Y+ ++ K+GD A VF++M+
Sbjct: 281 EEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEML 331
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 13/263 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVR--QGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
L EMR G PS TY ++ R Q ++VE L L+ EM + G+ N+ T L+
Sbjct: 401 LFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETL-LR-EMEDLGLEPNVKSYTCLISA 458
Query: 63 HCLLGDINS-ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ ++ A F + + G+ P++ +++ LI S G EKA+ + M GI+P
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 122 TVFIVKFLLKGFQKQ----NMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEAC 177
+V +L F++ ++E +L E ++ + +TYN LL G +EA
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIK---GTRITYNTLLDGFAKQGLYIEAR 575
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+++ + G+ PS+++YN ++ + R G ++ + LKP+++TY+ +I F
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 238 FKKGDFERAFGVFEQMMAANANL 260
+ DF+RAF + +MM + +
Sbjct: 636 VRVRDFKRAF-FYHKMMVKSGQV 657
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 37/291 (12%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ ++M G S+ + ++ + +G EAL ++ EM G+ N IV +LM +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSK----------IGSMEK------- 106
I LF E+ + G+ P+A T+++L+D ++ + ME
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 107 -------------------AFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
A + + RMK +G++P+ L+ + E AY +
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 148 EAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
E + GI SV TY +L G + + M+ + + + ++YN ++ G ++G
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+A V++ K GL+P+ +TY L++ + + G + + ++M A N
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 10/235 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEA-----LRLKDEMVNSGVPVNIIVATSL 59
LL+EM LG P+ +YT +I R + + LR+K G+ + T+L
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK----KVGLKPSSHSYTAL 491
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ + + G A F+E+ + G+ P+ T++ ++D + G K E++ M I
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACN 178
+ T LL GF KQ + A ++ E + G+ SV+TYN+L++ G+ +
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ 611
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
LL +M + + P ++Y+ +I R A+ ++K G P+ +Y L
Sbjct: 612 LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
++F+++ E GV + F L+ G E+A + M+ GI+ + L+ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K N +E L E + G+ S TYNIL+ + LL +M G+ P++
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 193 VSYNHIILGHCRKGCMDD-AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
SY +I + R M D A R+ K GLKP++ +YT LI + G E+A+ FE
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 252 QMMAANANLQITQFT 266
+M + +T
Sbjct: 510 EMCKEGIKPSVETYT 524
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 158 VTYNILLSWLCGLGKVV-EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMN 216
VT IL++ L G+ E + +KM KGV S + ++ C +G ++A +
Sbjct: 309 VTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQT 368
Query: 217 RILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ KKG++ N + Y L+D + K E G+F +M
Sbjct: 369 EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 10 RALGWIPSEGTYTSVIGTC--VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+ + P + +Y +++ + V+Q +++ + ++M+ G +++ +M + LG
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY--EQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+ +L DE+V+ G +P+ T+++L+ + A L N M+ +G++P V
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L+ G + LE +DE V+ G VV Y ++++ G++ +A + +M K
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
G P++ +YN +I G C G +A +++ + +G PN + Y+ L++ G A
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Query: 247 FGVFEQMM 254
V + M+
Sbjct: 452 HEVVKDMV 459
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ ++M G+ P TY V+ R G RL DEMV G ++ L+ H
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH-HL 302
Query: 65 LLGDIN-SALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G+ +AL L + + E GV P + F+ LID S+ G +E + +G P V
Sbjct: 303 ATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDK 182
++ G+ LE A + E E G + +V TYN ++ C GK EAC LL +
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
M S+G P+ V Y+ ++ G + +A+ V+ +++KG
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQG---NVVEALRLKDEMVNSGVPVNIIVATSL 59
C+L+ EM G+ + T+ +I TC G +VVE +K + N P L
Sbjct: 172 CRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF-IKSKTFNYR-PYKHSYNAIL 229
Query: 60 MKGHCLLGDINSAL--KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
H LLG L ++++++E G P+ +T+++++ + ++G ++ + L + M
Sbjct: 230 ---HSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKD 286
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEA 176
G P ++ LL N A LL+ E G+ V+ + L+ L GK+ EA
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EA 345
Query: 177 CN-LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
C +D+ + G TP +V Y +I G+ G ++ A + + +KG PN TY +I
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
GF G F+ A + ++M + N ++ L
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
LMK G+ + +L DE+++ G A TF++LI + G E + + K
Sbjct: 158 LMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFN 217
Query: 119 IQPT-----------VFIVKFLLKGFQKQNMLENA------------------------Y 143
+P + + ++ L + + MLE+ Y
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 144 RLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
RLLDE V+ G + + TYNILL L K + A NLL+ M GV P ++ + +I G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
R G ++ M+ +K G P+ + YT +I G+ G+ E+A +F++M
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+LL EM G+ P TY ++ + AL L + M GV +I T+L+ G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G + + DE V+ G P+ V ++V+I G +EKA E++ M G P V
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDK 182
F +++GF + A LL E G + V Y+ L++ L GKV+EA ++
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 183 MMSKGVTPSLVS 194
M+ KG L+S
Sbjct: 458 MVEKGHYVHLIS 469
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 11/267 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L+KEM G P T+ +IG + G A+ L +M G+ ++ T+++
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G AL +F ++ AGV PNAVT + S + + + E+++ MG
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
V + L+ + K LE+A ++ D V T+N +++ C G +A L
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKN---KDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLIDGFFKK 240
+M + P+++++N +I G+ + G +A + R+ K G ++ N T+ +I G+ +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 241 GDFERAFGVFEQMMAANANLQITQFTP 267
G + A +F +M Q ++F P
Sbjct: 503 GKKDEALELFRKM-------QFSRFMP 522
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 40/238 (16%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
++I S++ +C G A++L E+ + G++P VT+++LI +++G + A +L
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 112 NRMKLMGIQPTVFIVKFLLKG-------FQKQNMLENAY--------------------- 143
+M+ GI VF ++ G +Q +M +
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 144 RLLDEAVE-HGIA-------SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+++++ E H IA V+ N L+ GK+ +A + D + +K V ++
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTW 421
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
N +I G+C+ G AY + R+ L+PN +T+ +I G+ K GD A +F++M
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Query: 5 LLKEMRALGWIPSEG------TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS 58
LL+ +AL + +G TY ++ +C+ G++ R+ ++ V T
Sbjct: 62 LLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSI-HLGRILHARFGLFTEPDVFVETK 120
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L+ + G I A K+FD + E N T+S +I S+ + +L+ M G
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVV-TYNILLSWLCGLGKVVEAC 177
+ P F+ +L+G +E + ++ G++S + N +L+ G++ A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+M + V +++N ++L +C+ G ++A ++ + K+G+ P +T+ LI G+
Sbjct: 237 KFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 238 FKKGDFERAFGVFEQM 253
+ G + A + ++M
Sbjct: 293 NQLGKCDAAMDLMQKM 308
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 41/236 (17%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+ S+I + G +A L M ++ + NII +++ G+ GD A+ LF +
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 80 VEAG-VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLL-------- 130
+ G V N T++++I + G ++A EL+ +M+ P + LL
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 131 -------------KGFQKQNMLENAYRLLDEAVEHG-------------IASVVTYNILL 164
+ + ++NA L D + G ++T+N L+
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNA--LTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA----YSVMN 216
G A L ++M ++G+TP+ + + IIL H G +D+ YS+ N
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL +EM+A+ P+ TY ++I R V A+ + +EM + + +N +V ++
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G ++ AL + + P VT++ L+ K G + A ++ M G+ P
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
T K F K N E L + +E G + +TY+++L LC GK+ A +
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVN 448
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M ++G+ P L++ +I CR +++A+ + +++G+ P +T+ + +G K
Sbjct: 449 KEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK 508
Query: 241 G 241
G
Sbjct: 509 G 509
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
W+PS + ++ R + +A +L +EM V ++ +L++G+C + + A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+++ +E+ A + N + F+ +ID + G + +A + R + PT+ L+K
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
F K L A ++L + G+ + TYN + K E NL K++ G +P
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
++Y+ I+ C G + A V + +G+ P+ LT T LI + E AF F+
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFD 484
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 17/257 (6%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEAL----RLKDEMVNSGVPVNIIVATS 58
CK E+R L ++ ++G+V EA R+ M ++ VP ++ +
Sbjct: 206 CKSATELRLL---------EVLLDALCKEGHVREASMYLERIGGTMDSNWVP-SVRIFNI 255
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L+ G + A KL++E+ V P VT+ LI+ ++ ++ A E+ MK+
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEA 176
++ + ++ G + L A +++ E G ++VTYN L+ C G + A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG-PTIVTYNSLVKNFCKAGDLPGA 374
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+L MM++GV P+ +YNH + ++ ++ ++++ G P+ LTY ++
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 237 FFKKGDFERAFGVFEQM 253
+ G A V ++M
Sbjct: 435 LCEDGKLSLAMQVNKEM 451
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 117/250 (46%), Gaps = 12/250 (4%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV-----NIIVATSLMKGHCLLGDINS 71
S T+ +I R G V +A+R E S PV + + L+ C G +
Sbjct: 172 SADTFIVLIRRYARAGMVQQAIRAF-EFARSYEPVCKSATELRLLEVLLDALCKEGHVRE 230
Query: 72 ALKLFDEI---VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
A + I +++ P+ F++L++ + +++A +L+ MK M ++PTV
Sbjct: 231 ASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 290
Query: 129 LLKGFQKQNMLENAYRLLDEA--VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSK 186
L++G+ + ++ A +L+E E I +V +N ++ L G++ EA ++++
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV-FNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
P++V+YN ++ C+ G + A ++ ++ +G+ P TY F K E
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 247 FGVFEQMMAA 256
++ +++ A
Sbjct: 410 MNLYFKLIEA 419
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS---LMKGHCLLGDI 69
G+ S + SV+ + + A L + V S N++ A + L++ + G +
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMV 189
Query: 70 NSALKLFDEIVEAGVAPNAVT----FSVLIDCSSKIGSMEKAFELYNRMK-LMGIQ--PT 122
A++ F+ + T VL+D K G + +A R+ M P+
Sbjct: 190 QQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPS 249
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLD 181
V I LL G+ + L+ A +L +E + +VVTY L+ C + +V A +L+
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + + + +N II G G + +A +M R P +TY L+ F K G
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAG 369
Query: 242 DFERAFGVFEQMMAANANLQITQF 265
D A + + MM + T +
Sbjct: 370 DLPGASKILKMMMTRGVDPTTTTY 393
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 87 NAVTFSVLIDCSSKIGSME---KAFELYNRMKLMGIQPT-VFIVKFLLKGFQKQNMLENA 142
+A TF VLI ++ G ++ +AFE + + T + +++ LL K+ + A
Sbjct: 172 SADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA 231
Query: 143 YRLLDE----AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
L+ + + SV +NILL+ K+ +A L ++M + V P++V+Y +
Sbjct: 232 SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
I G+CR + A V+ + ++ N + + P+IDG + G A G+ E+ +
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 259 NLQITQFTPL 268
I + L
Sbjct: 352 GPTIVTYNSL 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+LK M G P+ TY + E + L +++ +G + + ++K
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C G ++ A+++ E+ G+ P+ +T ++LI ++ +E+AFE ++ GI P
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 122 TVFIVKFLLKGFQKQNMLENAYRL 145
K + G + + M + A RL
Sbjct: 494 QYITFKMIDNGLRSKGMSDMAKRL 517
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L K M+ G P E TY S+ V EA R+ EM++SG +++
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ LG ++ A+ L++ + + GV PN V + LI+ ++ G +E+A + + M+ G+Q
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLL 180
++ L+K + K LE A R+ D+ + G V N +LS LG V EA ++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+ + KG T ++S+ ++ + G +D+A V + + GL + ++ ++ +
Sbjct: 714 NALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 241 GDFERAFGVFEQMM 254
G +F +M+
Sbjct: 773 GQLSECCELFHEML 786
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LLK+M G P TY ++ G++ AL ++ G+ + + +++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 62 GHC---LLGDINSALKLFDE----------------IVEAGVAPNA-------------- 88
C ++ ++ + + D V G+ A
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 89 -VTFSVLIDCSSKIG-SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
T + +ID ++ G +E Y + + G + V ++K + K + E A L
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 147 DEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
G TYN L L G+ V EA +L +M+ G P +Y +I + R
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G + DA + + K G+KPN + Y LI+GF + G E A F M
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+G + + ++V+I K EKA L+ MK G P L + ++++
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 142 AYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A R+L E ++ G TY +++ LG + +A +L + M GV P+ V Y +I
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G G +++A + + G++ N + T LI + K G E A V+++M
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+ ++I + G + +A L EM+ SGVP++ + +++ G ++ A L ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G++P+ T+++L+ + G +E A E Y +++ +G+ P + +L ++ M+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
++ E + I + +++ G VV+A L ++ V S + +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLAAV 485
Query: 199 ILGHCRKGCMDDAYSVM-NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
I + KG +A +V + G + + L Y +I + K E+A +F+ M
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 29/252 (11%)
Query: 8 EMRALGWIPSEGTYTSVIGTCVRQGNVVEAL----------RLKDEMV---------NSG 48
EM G +P+ TY ++ + G V EAL DE+ NSG
Sbjct: 170 EMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSG 229
Query: 49 VPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCS-SKIGS---M 104
A KG C G ++ L D+ + G A + V + K+G+ +
Sbjct: 230 ---EFDRADRFFKGWC-AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPI 285
Query: 105 EKAFELYNRMKLMGIQPTVF-IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNI 162
EK+ + +P + L+ + K L +A L E ++ G+ VT+N
Sbjct: 286 EKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNT 345
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
++ G + EA +LL KM KG++P +YN ++ H G ++ A +I K G
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 223 LKPNALTYTPLI 234
L P+ +T+ ++
Sbjct: 406 LFPDTVTHRAVL 417
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P S++ C G V EA + + + G ++I ++M + +G ++ A+++
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEV 746
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM----KLM---GIQPTVFIVKF 128
+E+ E+G+ + +F+ ++ C + G + + EL++ M KL+ G T+F +
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTL-- 804
Query: 129 LLKG---FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L KG + + L+ AY +EA +A+ L S + +E+C ++ S
Sbjct: 805 LKKGGVPSEAVSQLQTAY---NEA--KPLATPAITATLFSAMGLYAYALESCQ---ELTS 856
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+ +YN +I + G +D A R+ +KGL+P+ +T L+ + K G E
Sbjct: 857 GEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P+ TY +I R G + A + M + N++ +++ G C +N A+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
F ++ + GV N VT+ LI + ++EKA Y +M G P I L+ G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 135 KQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
+ +A R++++ E G + ++ YN+L+ C + +L M +G P +
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+YN +I + + +M ++ + GL P TY +ID + G+ + A +F+ M
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 43/293 (14%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV-NIIVATS-----LMKGHCLLGDI 69
P T +I T + V EAL + ++M N+I A S L+ G C +G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 70 NSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
A +L + +E PNAVT++ LID + G +E A E+ +RMK I+P V V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G + + L A + + G+ +VVTY L+ C + V +A +KM+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 188 VTPS-----------------------------------LVSYNHIILGHCRKGCMDDAY 212
+P L++YN +I C K + Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
++ + K+G KP+++TY LI F K DFE + EQM + +T +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY ++I C NV +A+ ++M+ +G + + +L+ G C + + A+++ +++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G + + + +++LI + EK +E+ M+ G +P L+ F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNH 197
E+ R++++ E G+ +V TY ++ C +G++ EA L M + V P+ V YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+I + G A S+ + K ++PN TY L +K E + ++M+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L +M G P TY ++I + + R+ ++M G+ + +++ +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 64 CLLGDINSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C +G+++ ALKLF ++ + + V PN V +++LI+ SK+G+ +A L MK+ ++P
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
V L K ++ E +L+DE VE + +T IL+ L G ++V+
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 48 GVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA 107
GV N + T + C N+A + ++++ A F+ L+ C + + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE----AVEHG---IASVVTY 160
+L +M + I+P V + L+ K ++ A + ++ + G A + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 161 NILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
N L+ LC +G++ EA LL +M + + P+ V+YN +I G+CR G ++ A V++R+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ +KPN +T ++ G + A F M
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 35 VEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI----VEAG--VAPNA 88
++ ++++ ++V G+ +N + C ++ AL++F+++ + G + ++
Sbjct: 320 MDEVKIRPDVVTLGILINTL---------CKSRRVDEALEVFEQMRGKRTDDGNVIKADS 370
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
+ F+ LID K+G +++A EL RMKL P L+ G+ + LE A ++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 148 EAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
E I +VVT N ++ +C + A M +GV ++V+Y +I C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
++ A ++L+ G P+A Y LI G + A V E++ +L + +
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 267 PL 268
L
Sbjct: 551 ML 552
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P+ TY +I R G + A + M + N++ +++ G C +N A+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
F ++ + GV N VT+ LI + ++EKA Y +M G P I L+ G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 135 KQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
+ +A R++++ E G + ++ YN+L+ C + +L M +G P +
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+YN +I + + +M ++ + GL P TY +ID + G+ + A +F+ M
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 43/293 (14%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV-NIIVATS-----LMKGHCLLGDI 69
P T +I T + V EAL + ++M N+I A S L+ G C +G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 70 NSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
A +L + +E PNAVT++ LID + G +E A E+ +RMK I+P V V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G + + L A + + G+ +VVTY L+ C + V +A +KM+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 188 VTPS-----------------------------------LVSYNHIILGHCRKGCMDDAY 212
+P L++YN +I C K + Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
++ + K+G KP+++TY LI F K DFE + EQM + +T +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 2/248 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY ++I C NV +A+ ++M+ +G + + +L+ G C + + A+++ +++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G + + + +++LI + EK +E+ M+ G +P L+ F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNH 197
E+ R++++ E G+ +V TY ++ C +G++ EA L M + V P+ V YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I + G A S+ + K ++PN TY L +K E + ++M+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHL 717
Query: 258 ANLQITQF 265
N +Q+
Sbjct: 718 VNQIRSQW 725
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L +M G P TY ++I + + R+ ++M G+ + +++ +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 64 CLLGDINSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C +G+++ ALKLF ++ + + V PN V +++LI+ SK+G+ +A L MK+ ++P
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV 157
V L K ++ E +L+DE VEH + +
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQI 721
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 48 GVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA 107
GV N + T + C N+A + ++++ A F+ L+ C + + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE----AVEHG---IASVVTY 160
+L +M + I+P V + L+ K ++ A + ++ + G A + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 161 NILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
N L+ LC +G++ EA LL +M + + P+ V+YN +I G+CR G ++ A V++R+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ +KPN +T ++ G + A F M
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 32 GNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA-GVAPNAVT 90
G A +L DEM + +L+ + ++ A+K F E+ E G+ P+ VT
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
++ +I + GSM+ ++ ++ G +P + LL+ F ++ + R+ D
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 151 EHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
++ ++ +YN + L K +A NL+D M ++G++P + +YN +I + ++
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ N + +KGL P+ +TY LI KKGD +RA V E+ +
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLM 60
A KL EM L + ++ +++ V + EA++ E+ G+ +++ +++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
K C G ++ L +F+E+ + G P+ ++F+ L++ + + +++ MK +
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + ++G + +A L+D GI+ V TYN L++ + E
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
++M KG+TP V+Y +I C+KG +D A V +K L Y P+++
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMG 380
Query: 240 KGDFERA 246
G + A
Sbjct: 381 AGKIDEA 387
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 115 KLMGIQPTVFIVKF-LLKGFQKQNMLENAYRLLDEAVEHGIASVV-TYNILLSWLCGLGK 172
K I+ F+++ LL G+ M E+A++L DE E V ++N LLS K
Sbjct: 115 KFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKK 172
Query: 173 VVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
+ EA ++ K G+TP LV+YN +I CRKG MDD S+ + K G +P+ +++
Sbjct: 173 LDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 232 PLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
L++ F+++ F +++ M + N + I +
Sbjct: 233 TLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +E+ G+ P ++ +++ R+ VE R+ D M + + NI S ++G
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
AL L D + G++P+ T++ LI ++E+ + YN MK G+ P
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTV 334
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLL 180
L+ K+ L+ A + +EA++H + S Y ++ L G GK+ EA L+
Sbjct: 335 TYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
L G C + D A+KL +E++EAG P T+ ID + G +++A +L++ M G
Sbjct: 274 LFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG 333
Query: 119 IQ---PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVV 174
PT ++ K + E + L+ + G + V TY ++ +C KV
Sbjct: 334 SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD 393
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
EA LD+M +KG P +V+YN + C D+A + R+++ P+ TY LI
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Query: 235 DGFFKKGDFERAFGVFEQM 253
FF+ D + AF + +M
Sbjct: 454 SMFFEMDDPDGAFNTWTEM 472
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL+ MR P T+ + R + +A++L +EM+ +G + + C
Sbjct: 256 LLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFC 314
Query: 65 LLGDINSALKLFDEIVEAGVA---PNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G ++ A LFD ++ G A P A TF+++I +K E+ FEL RM G P
Sbjct: 315 QAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLP 374
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
V K +++G ++ AY+ LDE G +VTYN L LC K EA L
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+M+ PS+ +YN +I D A++ + K+ + TY +I+G F
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
+L+ M + G +P TY VI G C+ + V EA + DEM N G P +I+ ++
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAE-KVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C + ALKL+ +VE+ AP+ T+++LI ++ + AF + M
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKV 173
V ++ G + + A LL+E V G+ + Y + S+L L +V
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLK--LPYRVFDSFLMRLSEV 529
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 4/189 (2%)
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
V P+A TF+VL ++ +KA +L M G +P F + F + M++ A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 144 RLLDEAVEHGIA----SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
L D + G A + T+ +++ L K E L+ +M+S G P + +Y +I
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
G C +D+AY ++ + KG P+ +TY + + + A ++ +M+ +
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 260 LQITQFTPL 268
+ + L
Sbjct: 444 PSVQTYNML 452
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVN--------- 52
A KLL+EM G P TY + I T + G V EA L D M+ G V+
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 53 IIVA-----------------------------TSLMKGHCLLGDINSALKLFDEIVEAG 83
+IVA +++G C+ ++ A K DE+ G
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
P+ VT++ + + ++A +LY RM P+V L+ F + + + A+
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Query: 144 RLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
E + + V TY +++ L + EAC LL+++++KG+
Sbjct: 467 NTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ P F++L+D K G +++ L RM+ ++P L G+ +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDP 284
Query: 140 ENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG---VTPSLVSY 195
+ A +LL+E +E G TY + C G V EA +L D M++KG P+ ++
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+I+ + ++ + ++ R++ G P+ TY +I+G + A+ ++M
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 160 YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
+N+LL LC G V E LL +M + V P ++N + G CR A ++ ++
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+ G KP TY ID F + G + A +F+ M+
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMIT 331
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 45/287 (15%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGT-CVRQG-NVVEALRLKDEMVNSGVPVNIIVATS 58
+A + KEM+ +G IPS T+ +I C ++G NV EA R EM+ SG + +
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSME------------- 105
+ C +G+ A D + + G P V +S+ I +IG +E
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 106 ----------------------KAFELYNRMKLMGIQPTVFI----VKFLLKGFQKQNML 139
KA + N MK +G +P V + + + K Q + +L
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL 909
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
E ++ E+ E SVVTY ++ LGKV EA N M +G +P +Y+ I
Sbjct: 910 ETCQKMEGESCE---PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
C+ +DA +++ +L KG+ P+ + + + G ++G + A
Sbjct: 967 NCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALR-LKDEMVNSGVPVNIIVATSL 59
+A + KEM G TY ++ C+ + V+ ++ + D+MV L
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLD-CIAKSEKVDVVQSIADDMVRICEISEHDAFGYL 335
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+K C+ G I AL+L E+ + +A F +L+ + M A E+ + MK +
Sbjct: 336 LKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL 395
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACN 178
+ + ++ G+ +QN + A + + G V TY ++ L L + + CN
Sbjct: 396 DDSN-VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN 454
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L ++M+ G+ P V+ ++ GH + + +A+ V + + +KG+KP +Y+ +
Sbjct: 455 LFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Query: 239 KKGDFERAFGVFEQMMAA 256
+ ++ +F QM A+
Sbjct: 515 RSSRYDEIIKIFNQMHAS 532
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G N A++ F E+ + G+ P++ TF LI C K ++E+A + M G P
Sbjct: 727 GLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+V+ L + ++A LD + G V Y+I + LC +GK+ EA + L
Sbjct: 787 LVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+ +Y I+ G ++G + A +N + + G KP YT LI FFK+ E
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLE 906
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
+ ++M + + +T +
Sbjct: 907 KVLETCQKMEGESCEPSVVTYTAM 930
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TY +I R G + A + M + N++ +++ G C +N A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F ++ + GV N VT+ LI + ++EKA Y +M G P I L+ G +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+A R++++ E G + ++ YN+L+ C + +L M +G P ++
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
YN +I + + +M ++ + GL P TY +ID + G+ + A +F+ M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 43/293 (14%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPV-NIIVATS-----LMKGHCLLGDI 69
P T +I T + V EAL + ++M N+I A S L+ G C +G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 70 NSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
A +L + +E APNAVT++ LID + G +E A E+ +RMK I+P V V
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
++ G + + L A + + G+ +VVTY L+ C + V +A +KM+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 188 VTPS-----------------------------------LVSYNHIILGHCRKGCMDDAY 212
+P L++YN +I C K + Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
++ + K+G KP+++TY LI F K DFE + EQM + +T +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY ++I C NV +A+ ++M+ +G + + +L+ G C + + A+++ +++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G + + + +++LI + EK +E+ M+ G +P L+ F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 140 ENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNH 197
E+ R++++ E G+ +V TY ++ C +G++ EA L M + V P+ V YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+I + G A S+ + K ++PN TY L +K E + ++M+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L +M G P TY ++I + + R+ ++M G+ + +++ +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 64 CLLGDINSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
C +G+++ ALKLF ++ + + V PN V +++LI+ SK+G+ +A L MK+ ++P
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
V L K ++ E +L+DE VE + +T IL+ L G ++V+
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 48 GVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA 107
GV N + T + C N+A + ++++ A F+ L+ C + + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD----EAVEHG---IASVVTY 160
+L +M + I+P V + L+ K ++ A + + + + G A + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 161 NILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
N L+ LC +G++ EA LL +M + + P+ V+YN +I G+CR G ++ A V++R+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ +KPN +T ++ G + A F M
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 15/252 (5%)
Query: 21 YTSVIGTCVRQGNVVEALRL----KDEMVNSGVPVNIIVATSLMKGHC-LLGDINSALKL 75
+ S++ R NV +A L KD+ NI+ + G C ++G A ++
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIV-----LNGWCNVIGSPREAERV 289
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ E+ GV + V++S +I C SK GS+ K +L++RMK I+P + ++ K
Sbjct: 290 WMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAK 349
Query: 136 QNMLENAYRLLDE-AVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
+ + A L+ E GI +VVTYN L+ LC K EA + D+M+ KG+ P++
Sbjct: 350 ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 409
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+Y H + R G ++ + ++ ++ K G +P TY LI + DF+ ++++M
Sbjct: 410 TY-HAFMRILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 466
Query: 254 MAANANLQITQF 265
++ +
Sbjct: 467 KEKTVGPDLSSY 478
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 26 GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVA 85
G C G+ EA R+ EM N GV +++ +S++ + G +N LKLFD + + +
Sbjct: 275 GWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE 334
Query: 86 PNAVTFSVLIDCSSKIGSMEKAFELYNRMKL-MGIQPTVFIVKFLLKGFQKQNMLENAYR 144
P+ ++ ++ +K + +A L M+ GI+P V L+K K E A +
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 145 LLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHC 203
+ DE +E G+ ++ TY+ + L +V E LL KM G P++ +Y +I C
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLC 451
Query: 204 RKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM----MAANAN 259
R D+ + + + +K + P+ +Y +I G F G E A+G +++M M N N
Sbjct: 452 RWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNEN 511
Query: 260 LQ 261
++
Sbjct: 512 VE 513
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++L M G PS ++ ++ V E ++ GV ++ L+K
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G C G++ +AL+L DE + PN +TFS LI G E+AF+L RM+ I+P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
L+ G +K+ +E LL+ G + TY +L L + +EA ++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+M+S G+ PS +SY ++LG C + + V+ +++ G P L + ++
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 74 KLFDEI-------VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
KLFDEI + GV +A ++LI + G++E A +L + +P V
Sbjct: 181 KLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTF 240
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L++GF + E A++LL+ + I +T+NIL+S L G+V E +LL++M
Sbjct: 241 SPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKV 300
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
KG P+ +Y ++ G K +A +M++++ G++P+ L+Y ++ G
Sbjct: 301 KGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGL 352
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L G IN A+++ + + G P++ +F+ +++ ++ +++ +G++
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 125 IVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ L+KG + LE A +LLDE + +V+T++ L+ C GK EA LL++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ + P +++N +I G +KG +++ ++ R+ KG +PN TY ++ G K
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 244 ERAFGVFEQMMA 255
A + QM++
Sbjct: 324 LEAKEMMSQMIS 335
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVN---SGVPVNIIVATS 58
A + + M++ G PS TY ++ T V EA + + +++ S + + +
Sbjct: 200 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 259
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ + G+ A K+F +V GV + VT++ L+ + S ++ ++Y++M+
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSD 316
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEAC 177
IQP V L+K + + E A + +E ++ G+ YNILL G V +A
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ M + P L SY ++ + M+ A RI G +PN +TY LI G+
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 238 FKKGDFERAFGVFEQM 253
K D E+ V+E+M
Sbjct: 437 AKANDVEKMMEVYEKM 452
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 1 MACKLLKEMRALGWIP-SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+ ++L+ +R W SE + +I + GN A R+ + G N+I T+L
Sbjct: 128 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 187
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDC---SSKIGSMEKAFELYNRMKL 116
M+ + G N+A +F + +G P+A+T+ +++ K E+ FE K
Sbjct: 188 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 247
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
++P + ++ ++K E A ++ V G+ S VTYN L+S+ +V
Sbjct: 248 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV-- 305
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ D+M + P +VSY +I + R ++A SV +L G++P Y L+D
Sbjct: 306 -SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 364
Query: 236 GFFKKGDFERAFGVFEQM 253
F G E+A VF+ M
Sbjct: 365 AFAISGMVEQAKTVFKSM 382
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P + Y +I + GN +A ++ MV GVP + + SLM +++ K+
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KI 308
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+D++ + + P+ V++++LI + E+A ++ M G++PT LL F
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
M+E A + I + +Y +LS + A ++ G P++V+
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
Y +I G+ + ++ V ++ G+K N T ++D + +F A G +++M
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
K+ +M+ P +Y +I R EAL + +EM+++GV L+
Sbjct: 306 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 365
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ G + A +F + + P+ +++ ++ ME A + + R+K+ G +P
Sbjct: 366 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 425
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI---ASVVTYNILLSWLC-------GLGK 172
+ L+KG+ K N +E + ++ GI +++T + S C G K
Sbjct: 426 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYK 485
Query: 173 VVEACNLLDKMMSKGVTPSLVS 194
+E+C + +K V SL S
Sbjct: 486 EMESCGVPPDQKAKNVLLSLAS 507
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +EM G P+ Y ++ G V +A + M + ++ T+++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ D+ A K F I G PN VT+ LI +K +EK E+Y +M+L GI+
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 122 TVFIV 126
I+
Sbjct: 460 NQTIL 464
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + K MR P +YT+++ V ++ A + + G NI+ +L+K
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ D+ +++++++ +G+ N + ++D S + + A Y M+ G+ P
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
Query: 122 TVFIVKFLLKGFQKQNMLENAYRL 145
LL Q+ LE A L
Sbjct: 495 DQKAKNVLLSLASTQDELEEAKEL 518
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVN---SGVPVNIIVATS 58
A + + M++ G PS TY ++ T V EA + + +++ S + + +
Sbjct: 193 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 252
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ + G+ A K+F +V GV + VT++ L+ + S ++ ++Y++M+
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSD 309
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV-VTYNILLSWLCGLGKVVEAC 177
IQP V L+K + + E A + +E ++ G+ YNILL G V +A
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ M + P L SY ++ + M+ A RI G +PN +TY LI G+
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 238 FKKGDFERAFGVFEQM 253
K D E+ V+E+M
Sbjct: 430 AKANDVEKMMEVYEKM 445
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 1 MACKLLKEMRALGWIP-SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+ ++L+ +R W SE + +I + GN A R+ + G N+I T+L
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDC---SSKIGSMEKAFELYNRMKL 116
M+ + G N+A +F + +G P+A+T+ +++ K E+ FE K
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
++P + ++ ++K E A ++ V G+ S VTYN L+S+ +V
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV-- 298
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ D+M + P +VSY +I + R ++A SV +L G++P Y L+D
Sbjct: 299 -SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 357
Query: 236 GFFKKGDFERAFGVFEQM 253
F G E+A VF+ M
Sbjct: 358 AFAISGMVEQAKTVFKSM 375
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P + Y +I + GN +A ++ MV GVP + + SLM +++ K+
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KI 301
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+D++ + + P+ V++++LI + E+A ++ M G++PT LL F
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
M+E A + I + +Y +LS + A ++ G P++V+
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
Y +I G+ + ++ V ++ G+K N T ++D + +F A G +++M
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
K+ +M+ P +Y +I R EAL + +EM+++GV L+
Sbjct: 299 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ G + A +F + + P+ +++ ++ ME A + + R+K+ G +P
Sbjct: 359 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI---ASVVTYNILLSWLC-------GLGK 172
+ L+KG+ K N +E + ++ GI +++T + S C G K
Sbjct: 419 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYK 478
Query: 173 VVEACNLLDKMMSKGVTPSLVS 194
+E+C + +K V SL S
Sbjct: 479 EMESCGVPPDQKAKNVLLSLAS 500
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + +EM G P+ Y ++ G V +A + M + ++ T+++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ D+ A K F I G PN VT+ LI +K +EK E+Y +M+L GI+
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 122 TVFIVKFLL 130
I+ ++
Sbjct: 453 NQTILTTIM 461
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + K MR P +YT+++ V ++ A + + G NI+ +L+K
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ D+ +++++++ +G+ N + ++D S + + A Y M+ G+ P
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Query: 122 TVFIVKFLLKGFQKQNMLENAYRL 145
LL Q+ LE A L
Sbjct: 488 DQKAKNVLLSLASTQDELEEAKEL 511
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
M+ KL EMR+ P+ TYT+++ R+G +A + +++ G+ ++ V +LM
Sbjct: 304 MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALM 363
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ + G A ++F + G P+ ++++++D + G A ++ MK +GI
Sbjct: 364 ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 423
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
PT+ LL + K + ++ E E+G+ N +L+ LG+ + +
Sbjct: 424 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 483
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L +M + T + +YN +I + + G ++ + + +K +P+ +T+T I + +
Sbjct: 484 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Query: 240 KGDFERAFGVFEQMM 254
K + + VFE+M+
Sbjct: 544 KKLYVKCLEVFEEMI 558
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV----LIDCSSKIGSMEKAFELYNRM 114
L+K +C+ G I A + E+ V+P + +V + + G+ E+A +++ RM
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
K +PT ++ + K + +++L E H ++ TY L++ G
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+A + +++ G+ P + YN ++ + R G A + + + G +P+ +Y +
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 234 IDGFFKKGDFERAFGVFEQM 253
+D + + G A VFE+M
Sbjct: 398 VDAYGRAGLHSDAEAVFEEM 417
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
++ P+ + F++LID + ++A LY ++ PT L+K + ++E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 141 NAYRLLDEAVEHGIA----SVVTYNILLSWLCGL-GKVVEACNLLDKMMSKGVTPSLVSY 195
A +L E H ++ V YN + L G EA ++ +M P+ +Y
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 196 NHII--LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
N +I G K M ++ + + KPN TYT L++ F ++G E+A +FEQ+
Sbjct: 290 NLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +EM+ LG P+ ++ ++ + +V + + EM +GV + V S++ +
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
LG K+ E+ + T+++LI+ K G +E+ EL+ +K +P V
Sbjct: 473 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 532
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ + ++ + + +E ++ G A T +LLS C + VE + +
Sbjct: 533 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS-ACSSEEQVEQVTSVLRT 591
Query: 184 MSKGVTPS 191
M KGVT S
Sbjct: 592 MHKGVTVS 599
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L+E + + EG +I + G A ++ +EM N +++ +L+ +
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 64 CLLGDINSALKLFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
L + +LF+E+ + + P+ V+++ LI + S+ +A L + ++ G++P
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLD 181
+ LL + E + + VE +A + TYN L L K E NL
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
++ + G+ P + S+N +I G +G MD+A + I+K G +P+ T+ L+ K G
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 242 DFERAFGVFEQMMA 255
DFE A +F++ +
Sbjct: 335 DFESAIELFKETFS 348
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLS--WLCGLGKVVEACNLLDKMMSK-GV 188
+ K M ENA ++ +E SV+++N LLS L VVE L +++ K +
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVE--ELFNELPGKLSI 176
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
P +VSYN +I C K + +A ++++ I KGLKP+ +T+ L+ + KG FE
Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE 236
Query: 249 VFEQMMAANANLQITQF 265
++ +M+ N + I +
Sbjct: 237 IWAKMVEKNVAIDIRTY 253
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
+I K G E A +++ M + +V LL ++ + L +E G
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL--PG 172
Query: 154 IASV----VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
S+ V+YN L+ LC + EA LLD++ +KG+ P +V++N ++L KG +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ ++++K + + TY + G + + +F ++ A+ + F +
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
M+ KL EMR+ P+ TYT+++ R+G +A + +++ G+ ++ V +LM
Sbjct: 282 MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALM 341
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ + G A ++F + G P+ ++++++D + G A ++ MK +GI
Sbjct: 342 ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 401
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNL 179
PT+ LL + K + ++ E E+G+ N +L+ LG+ + +
Sbjct: 402 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 461
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L +M + T + +YN +I + + G ++ + + +K +P+ +T+T I + +
Sbjct: 462 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Query: 240 KGDFERAFGVFEQMM 254
K + + VFE+M+
Sbjct: 522 KKLYVKCLEVFEEMI 536
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV----LIDCSSKIGSMEKAFELYNRM 114
L+K +C+ G I A + E+ V+P + +V + + G+ E+A +++ RM
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
K +PT ++ + K + +++L E H ++ TY L++ G
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+A + +++ G+ P + YN ++ + R G A + + + G +P+ +Y +
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 234 IDGFFKKGDFERAFGVFEQM 253
+D + + G A VFE+M
Sbjct: 376 VDAYGRAGLHSDAEAVFEEM 395
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
++ P+ + F++LID + ++A LY ++ PT L+K + ++E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 141 NAYRLLDEAVEHGIA----SVVTYNILLSWLCGL-GKVVEACNLLDKMMSKGVTPSLVSY 195
A +L E H ++ V YN + L G EA ++ +M P+ +Y
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 196 NHII--LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
N +I G K M ++ + + KPN TYT L++ F ++G E+A +FEQ+
Sbjct: 268 NLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ +EM+ LG P+ ++ ++ + +V + + EM +GV + V S++ +
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
LG K+ E+ + T+++LI+ K G +E+ EL+ +K +P V
Sbjct: 451 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 510
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
+ + ++ + + +E ++ G A T +LLS C + VE + +
Sbjct: 511 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS-ACSSEEQVEQVTSVLRT 569
Query: 184 MSKGVTPS 191
M KGVT S
Sbjct: 570 MHKGVTVS 577
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ T ++ + +G EA + + +G ++I T+L+ + S + E+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
++G +++ F+ +I+ S+ G+ME A + +MK +G+ PT L+KG+
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 140 ENAYRLLDEAVEHGIASV----VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
E + LLD +E G V T+N+L+ C KV EA ++ KM GV P V+Y
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 196 NHIILGHCRKGCMDDAYS--VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
N I + +KG A S V ++K+ KPN T ++ G+ ++G +M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 254 --MAANANL 260
M ANL
Sbjct: 287 KEMRVEANL 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ T V+G R+G V + LR M V N++V SL+ G + D + ++
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+ E V + +T+S +++ S G MEKA +++ M G++P L KG+ +
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 136 QNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+ A LL+ + +VV + ++S C G + +A + +KM GV+P++ ++
Sbjct: 378 AKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
++ G+ A V+ + G+KP T+ L + +
Sbjct: 438 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGN-------VVEALRLKDEMVNSGVPVNII 54
A +++K+M G P TY ++ V++G VVE + +K++ +G I+
Sbjct: 207 AWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIV 266
Query: 55 VATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
V G+C G + L+ + E V N V F+ LI+ ++ + E+ M
Sbjct: 267 VG-----GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
K ++ V ++ + +E A ++ E V+ G+ Y+IL +
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+A LL+ ++ + P++V + +I G C G MDDA V N++ K G+ PN T+ L
Sbjct: 382 KKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 234 IDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
+ G+ + +A V + M + + F
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ T ++ + +G EA + + +G ++I T+L+ + S + E+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
++G +++ F+ +I+ S+ G+ME A + +MK +G+ PT L+KG+
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 140 ENAYRLLDEAVEHGIASV----VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
E + LLD +E G V T+N+L+ C KV EA ++ KM GV P V+Y
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 196 NHIILGHCRKGCMDDAYS--VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
N I + +KG A S V ++K+ KPN T ++ G+ ++G +M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 254 --MAANANL 260
M ANL
Sbjct: 287 KEMRVEANL 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 25/247 (10%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC----------- 64
P+ T V+G R+G V + LR M V N++V SL+ G
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 65 --------------LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL 110
L+G+ +++ + E V + +T+S +++ S G MEKA ++
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 111 YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGL 170
+ M G++P L KG+ + + A LL+ + +VV + ++S C
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSN 437
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
G + +A + +KM GV+P++ ++ ++ G+ A V+ + G+KP T+
Sbjct: 438 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Query: 231 TPLIDGF 237
L + +
Sbjct: 498 LLLAEAW 504
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
+ +VI GN+ +A++ +M G+ +L+KG+ + G + +L D ++
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 81 EAG---VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
E G V PN TF+VL+ K +E+A+E+ +M+ G++P
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP---------------- 221
Query: 138 MLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEA-CNLLDKM-MSKGVTPSLVSY 195
VTYN + + G+ V A +++KM M + P+ +
Sbjct: 222 ------------------DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC 263
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
++ G+CR+G + D + R+ + ++ N + + LI+GF + D
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVI---GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS 58
A + L +M+ LG P+ TY ++I G + E L L E N V NI
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA-FELYNRMKLM 117
L++ C + A ++ ++ E GV P+ VT++ + C + G +A E+ +M +
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Query: 118 -GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLS---------- 165
+P ++ G+ ++ + + R + E + A++V +N L++
Sbjct: 254 EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Query: 166 --------WLCGLGKVVE-------ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
L + VE +L M V +++Y+ ++ G M+
Sbjct: 314 IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
A V ++K G+KP+A Y+ L G+ + + ++A + E ++
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD-- 77
T+ V+ R V EA+ + M +P N++ L+ C ++ A ++F+
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 78 --------------------------------EIVEAGVAPNAVTFSVLIDCSSKIGSME 105
E+++AG P+ VT+S+++D K G ++
Sbjct: 230 RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 106 KAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILL 164
+A + M +PT FI L+ + +N LE A E G+ A V +N L+
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
C ++ +L +M SKGVTP+ S N I+ +G D+A+ V +++ K +
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCE 408
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQM 253
P+A TYT +I F +K + E A V++ M
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYM 437
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+ P TY+ ++ ++ N+ +A + EM+++G +I+ + ++ C G ++ AL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
+ + + P +SVL+ +E+A + + M+ G++ V + L+ F
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 134 QKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K N ++N YR+L E G+ + + NI+L L G+ EA ++ KM+ K P
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDA 411
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
+Y +I C K M+ A V + KKG+ P+ T++ LI+G ++ ++A + E+
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 253 MM 254
M+
Sbjct: 472 MI 473
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 110/221 (49%), Gaps = 9/221 (4%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ Y+ ++ T + + EA+ EM SG+ ++ V SL+ C + + ++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
E+ GV PN+ + ++++ + G ++AF+++ +M + +P ++K F +
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCE 423
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ +E A ++ + G+ S+ T+++L++ LC +AC LL++M+ G+ PS V+
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ G R+ + + + + L + K N L PL D
Sbjct: 484 F-----GRLRQLLIKEEREDVLKFLNE--KMNVLVNEPLCD 517
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 53 IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN 112
+I +T+ ++ + L+ D+ +A++ N TF +++ ++ +++A +N
Sbjct: 140 MIESTAKIRQYKLMWDLINAMR-------KKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGK 172
M+ + P + LL K + A + + + TY+ILL G GK
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLE---GWGK 249
Query: 173 ---VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
+ +A + +M+ G P +V+Y+ ++ C+ G +D+A ++ + KP
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 309
Query: 230 YTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
Y+ L+ + + E A F +M + + F L
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 3/247 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNI--IVATSLMKGHCLL 66
+R+ P + ++I C + G V A + EM P++ I +LMK C
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G + A +++ I + G+ +++ ++ SK G + A +Y MK + P
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L+ ML+ A+ +L +A GI ++Y+ L+ C +A L +K+ S
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+ P++ + N +I C + A ++ I GLKPN +TY+ L+ +K DFE
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 246 AFGVFEQ 252
+F + Q
Sbjct: 803 SFKLLSQ 809
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
YT++I +C + G V + +M NSGV N+ +L+ G G + A + +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK--LMGIQPTVFIVKFLLKGFQKQNM 138
V P+ V F+ LI + G++++AF++ MK I P + L+K
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+E A + ++GI + Y I ++ G AC++ M K VTP V ++
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 198 II--LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+I GH + +D+A+ ++ +G++ ++Y+ L+ D+++A ++E++ +
Sbjct: 685 LIDVAGHAK--MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 15/262 (5%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEA---LRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
P+ T+ ++ C ++ A LRL E SG+ + + T+L+ G +++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQE---SGMTADCKLYTTLISSCAKSGKVDAM 521
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++F ++ +GV N TF LID ++ G + KAF Y ++ ++P + L+
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 133 FQKQNMLENAYRLLDE--AVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV- 188
+ ++ A+ +L E A H I ++ L+ C G+V A + + G+
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 189 -TPSLVSYNHIILGHCRK-GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
TP + + I + C K G D A S+ + +K + P+ + ++ LID + A
Sbjct: 642 GTPEVYT---IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 247 FGVFEQMMAANANLQITQFTPL 268
FG+ + + L ++ L
Sbjct: 699 FGILQDAKSQGIRLGTISYSSL 720
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
AC + K+M+ P E ++++I + EA + + + G+ + I +SLM
Sbjct: 662 FACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM 721
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
C D AL+L+++I + P T + LI + + KA E + +K +G++
Sbjct: 722 GACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLK 781
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLC---------GLG 171
P L+ ++++ E +++LL +A G++ + ++ LC G
Sbjct: 782 PNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACAGGE 841
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK---------GCMD---DAYSVMNRIL 219
VV + ++ +K + +L+ Y I G GC+ DA ++ +R++
Sbjct: 842 PVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLGCLQLPHDA-ALRDRLI 900
Query: 220 KK-GLKPNALTYT---PLIDGFFKKGDFE-RAFGVFEQMMA 255
G+ ++ PL+DGF G+++ RAF + E+ +
Sbjct: 901 STLGINISSQKQHNIFPLVDGF---GEYDPRAFSLLEEATS 938
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
YT V + + G EAL + +EM + G+P + + + L++ ++ KLF E
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+ + ++ + G+ME E+ M+ ++ T I+ ++ GF KQ
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 141 NAYRLLDEAV-EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A ++ + A+ E A VTY I ++ C L K +A L D+M+ KG +V+Y++I+
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ + + DA +M ++ ++G KPN Y LID + D RA ++++M A
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 16/261 (6%)
Query: 3 CKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKD---EMVNSGVPVNIIVATSL 59
C+ L+E +AL P T +++I +C+R R+ + S + + + +
Sbjct: 127 CEDLREHKAL---PDGQTCSNLIRSCIRD----RKFRITHCLLSVFRSDKSLAVSASDAA 179
Query: 60 MKGHCLLGDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
MKG L +S +++FD + ++ GV P+ + +++ KIG K EL+ K
Sbjct: 180 MKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQR 239
Query: 119 I----QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKV 173
+ + + I + K A +L+E + GI S Y++L+ +V
Sbjct: 240 LSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREV 299
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
V L + K + ++L + R+G M+ V+ + K LK +
Sbjct: 300 VITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAI 359
Query: 234 IDGFFKKGDFERAFGVFEQMM 254
++GF K+ F A V+E M
Sbjct: 360 VNGFSKQRGFAEAVKVYEWAM 380
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
I E Y+++I + + A+R ++M G P + + +L+ + + +
Sbjct: 99 IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 158
Query: 75 LFDEIVEA--GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
LFDEI + + P+ +++ +LI G+ EKA E+ +M+ G++ T +L
Sbjct: 159 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC-NLLDKMMSKGVTP 190
K+ LE A L +E V+ G YN+ + + + E L+++M S G+ P
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEMSSMGLKP 276
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+SYN+++ +C +G +D+A V + PNA T+ LI +E+ + +F
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIF 336
Query: 251 EQ 252
++
Sbjct: 337 KK 338
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAP------NAVTFSVLIDCSSKIGSMEKAFEL 110
++L K H D + ALK++ + + +P +T L C + +E E
Sbjct: 38 STLRKEH----DPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCR-RFSDIETLIES 92
Query: 111 YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCG 169
+ + +P L++ + + +M +A R ++ ++G S V++N LL+
Sbjct: 93 HKNDPKIKEEP---FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLH 149
Query: 170 LGKVVEACNLLDKMMSK--GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
+ L D++ + + P +SY +I +C G + A +M ++ KG++
Sbjct: 150 SKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTT 209
Query: 228 LTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ +T ++ +KKG+ E A ++ +M+
Sbjct: 210 IAFTTILSSLYKKGELEVADNLWNEMV 236
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
D+ + KLFDE++E G+ P+ TF+ +I C+ + G ++A E + +M G +P +
Sbjct: 190 DLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMA 249
Query: 128 FLLKGFQKQNMLENAYRLLDEA-VEHGIASVVTYNILLSWLCGLGKVVEAC-NLLDKMMS 185
++ + + ++ A L D A E VT++ L+ + G+ + C N+ ++M +
Sbjct: 250 AMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR-IYGVSGNYDGCLNIYEEMKA 308
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
GV P+LV YN +I R A + ++ G PN TY L+ + + +
Sbjct: 309 LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDD 368
Query: 246 AFGVFEQMMAANANLQITQFTPL 268
A ++ +M +L + + L
Sbjct: 369 ALAIYREMKEKGLSLTVILYNTL 391
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + ++M + G P T ++I R GNV AL L D ++ + ++L++
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ + G+ + L +++E+ GV PN V ++ LID + +A +Y + G P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVV-EACNL 179
L++ + + ++A + E E G++ +V+ YN LLS +C + V EA +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEI 407
Query: 180 LDKMMS-KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
M + + P +++ +I + G + +A + + ++ + G +P T +I +
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYG 467
Query: 239 KKGDFERAFGVFEQMM 254
K + F+Q++
Sbjct: 468 KAKQVDDVVRTFDQVL 483
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVE-ALRLKDEMVNSGVPVNIIVATSLMKG 62
KL EM G P T+T++I +C RQ V + A+ ++M + G + + +++
Sbjct: 196 KLFDEMLERGIKPDNATFTTII-SCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ G+++ AL L+D +AVTFS LI G+ + +Y MK +G++P
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPN 314
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
+ I YN L+ + + +A +
Sbjct: 315 LVI----------------------------------YNRLIDSMGRAKRPWQAKIIYKD 340
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+++ G TP+ +Y ++ + R DDA ++ + +KGL + Y L+
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 243 FERAFGVFEQM 253
+ AF +F+ M
Sbjct: 401 VDEAFEIFQDM 411
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 110 LYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLC 168
L N ++ M V + +K F+K LE + +L DE +E GI T+ ++S
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 169 GLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNAL 228
G A +KM S G P V+ +I + R G +D A S+ +R + + +A+
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 229 TYTPLIDGFFKKGDFERAFGVFEQMMA 255
T++ LI + G+++ ++E+M A
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKA 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ K++ G+ P+ TY +++ R +AL + EM G+ + +I+ +L+
Sbjct: 337 IYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA 396
Query: 65 LLGDINSALKLFDEIVEAGVA-PNAVTFSVLID---CSSKIGSMEKAFELYNRMKLMGIQ 120
++ A ++F ++ P++ TFS LI CS ++ E A +M+ G +
Sbjct: 397 DNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL---QMREAGFE 453
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
PT+F++ +++ + K +++ R D+ +E GI
Sbjct: 454 PTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGI 487
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 32 GNVVEALRLKDEM------VNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVA 85
G++ AL L EM S +I SL+ CL G AL ++DE+ +G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 86 PNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRL 145
P+ T+ +LI K M+ A +Y M+ G P + LL G K + A +L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 146 LDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
++ V+ G+ AS TYNIL+ L G+ L + KG ++++ + L CR
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+G ++ A ++ + +G + +T + L+ GF K+G ++
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 60 MKGHCLLGDINSALKLFDEIVE------AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
+ G GD+++AL LF E+ E + P+ T++ LI G + A +++
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGK 172
+K+ G +P + L++G K +++A R+ E +G + + YN LL K
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
V EAC L +KM+ +GV S +YN +I G R G + +++ + KKG +A+T++
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 233 LIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ ++G E A + E+M ++ + + L
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 2 ACKLLKEMRALGWI------PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIV 55
A L KEM+ + P TY S+I G +AL + DE+ SG +
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 56 ATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK 115
L++G C ++ A++++ E+ G P+ + ++ L+D + K + +A +L+ +M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 116 LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVV 174
G++ + + L+ G + E + L + + G +T++I+ LC GK+
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
A L+++M ++G + LV+ + +++G ++G D +M I + L PN L + +
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 235 DGFFKK 240
+ K+
Sbjct: 507 EASLKR 512
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 67 GDINSALKLFDEIVEAGVAP-NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
GD++ A KLF+ GV + T++ ++ K G + A + ++M +
Sbjct: 608 GDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIAT 667
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+++G K + A +LD + G +V YN L++ L ++ EA L D M
Sbjct: 668 YNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK 727
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI-------DGF 237
S G+ P +VSYN +I + + G + +AY + +L G PN +T T L
Sbjct: 728 SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKAR 787
Query: 238 FKKGDFER 245
FKK F R
Sbjct: 788 FKKASFVR 795
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 106 KAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILL 164
K FE++N M + + T + ++ F K+ + A +LD+ E+ A+ + TYN+++
Sbjct: 615 KLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 165 SWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
L +G+ A +LD++ +G +V YN +I + +D+A + + + G+
Sbjct: 673 QGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGIN 732
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
P+ ++Y +I+ K G + A+ + M+ A
Sbjct: 733 PDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 107/300 (35%), Gaps = 58/300 (19%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ S Y+ + T R G + E L M GV ++ +A L+ G SA
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 73 LKLFDEIVEAGVAPNAVTF-SVLIDCSSKI--------------GSMEKAFELYNRMKLM 117
L + D + E G N + SVLI K S + + R+ ++
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 118 GIQPTVFIVKFLLKGFQKQNM------------------------------------LEN 141
P V LL G ++ +M L+
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 142 AYRLLDEAVEHGI-------ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
A L E E + TYN L+ LC GK +A + D++ G P +
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
Y +I G C+ MDDA + + G P+ + Y L+DG K A +FE+M+
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++ EM+ G++P Y ++ ++ V EA +L ++MV GV + L+
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILID 402
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G + LF ++ + G +A+TFS++ + G +E A +L M+ G
Sbjct: 403 GLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV 462
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ + LL GF KQ + +L+ E + V L W G VEA
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV-----LRWNAG----VEASLKRP 513
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
+ K TP S + G DD S
Sbjct: 514 QSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASA 546
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 1 MACKLLKEMRALGWIP-SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
+ACKL + +G + TY S++ + V++G A + D+M + +I +
Sbjct: 612 LACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVI 671
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
++G +G + A + D + + G + V ++ LI+ K +++A +L++ MK GI
Sbjct: 672 IQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGI 731
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVE 175
P V +++ K L+ AY+ L ++ G + +L + LGK +E
Sbjct: 732 NPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDY---LGKEME 784
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 129/295 (43%), Gaps = 33/295 (11%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+LK M G+ P+ + ++ C R G V EA ++ M+ SG+ V++ V + L+ G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G+ A+ LF+++++ G +PN VT++ LI +G +++AF + ++++ G+ P +
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 125 IVKFLLKGFQKQNMLENAYRLLDE------------------------------AVEHGI 154
+ ++ + + E A ++ + HGI
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 155 AS---VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
+ +VT N+L + +G A +L M K +Y + CR G A
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+ I+K+ +A ++ +ID + G + A +F++ + L + +T
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYT 493
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 28 CVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
C +Q N R D MV V L + + + I LK+ +G
Sbjct: 62 CAKQNNYFHDDRAFDHMVG--------VVEKLTREYYSIDRIIERLKI------SGCEIK 107
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
F +L++ + +KA E+Y M G P + ++ K N++ A +
Sbjct: 108 PRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIF- 166
Query: 148 EAVEHGIASVVTYNILLSWLC---GLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
E + + +++I LS C G G +V +L +M+ +G P+ + I+ CR
Sbjct: 167 EGIR--FRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQ 264
GC+ +A+ V+ ++ G+ + ++ L+ GFF+ G+ ++A +F +M+ + +
Sbjct: 225 TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVT 284
Query: 265 FTPL 268
+T L
Sbjct: 285 YTSL 288
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L +M +G P+ TYTS+I V G V EA + ++ + G+ +I++ ++
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFS----------------------------- 92
+ LG A K+F + + + P+ TF+
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 93 ---VLIDCSSKIGSMEKAFEL-----YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYR 144
+L +C SKIG A ++ Y L TV++ G + + Y+
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAI--KMYK 443
Query: 145 LLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
++ + +H A ++ ++ L LGK A +L + + + +VSY I G R
Sbjct: 444 IIIKEKKHLDAHF--HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
+++AYS+ + + G+ PN TY +I G K+ + E+ + + + L
Sbjct: 502 AKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 64 CLLG-DINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
CL+ D A +++ E+ + G+ P+ T++ +I + GS ++ + M+ GI+P
Sbjct: 161 CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP 220
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
++ GF ++ + ++L + G+ V TYNI + LC K EA LL
Sbjct: 221 NSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL 280
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
D M+S G+ P+ V+Y+H+I G C + ++A + ++ +G KP++ Y LI K
Sbjct: 281 DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG 340
Query: 241 GDFERAFGVFEQMMAAN 257
GDFE A + ++ M N
Sbjct: 341 GDFETALSLCKESMEKN 357
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+L M+ G TY I + ++ EA L D M+++G+ N + + L+ G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C D A KLF +V G P++ + LI K G E A L P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYN 161
I+K L+ G K + +E A L+ + E +V +N
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWN 400
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 46 NSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDC-SSKIGSM 104
+SG P+ + T L+K + L F +++E P + ++D S G +
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 105 EKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNIL 163
+KAFEL+ +L G+ P L++ F + L AY+L + +E + V +Y IL
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 164 LSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
+ C G+V A LLD M++KG P +I G C +G D+ + ++ KG
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGF 287
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ 261
P+ L+ GF G E A V E +M L
Sbjct: 288 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 325
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ + M+ G I +E TY+ ++ VR G AL + DEMVN+ + + +++
Sbjct: 235 RIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISAC 294
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ ALK+F +++ G+ PN V + LI+ K G + F++Y+ +K +G +P
Sbjct: 295 TKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDE 354
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASV--VTYNILLSWLCGLGKVVEACNLLD 181
+ LL K N E+ +L D + + YN + LG +A LL
Sbjct: 355 YTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLY 414
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDD-AYSVMNRILKKGLKPNALTYTPLI 234
+M G+T S SYN +++ C K A V + ++ KPN TY L+
Sbjct: 415 EMEGSGLTVSTSSYN-LVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 25/270 (9%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRL-----KDEMVNSGVPVNIIVA 56
A +L MR LG P+ S + +R G++ +A + K E V ++ A
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKA 185
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAP---NAVTFSVLIDCSSKIGSMEKAFELYNR 113
+ +KG SAL++F E+ + V ++ I +I ++ + ++
Sbjct: 186 VAEVKG------CESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRV 239
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKV 173
MK G T L+ F + E A + DE V + I+ + + + + + K
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKIS--LREDAMYAMISACTKE 297
Query: 174 VE---ACNLLDKMMSKGVTPSLVSYNHII--LGHCRK-GCMDDAYSVMNRILKKGLKPNA 227
+ A + M+ KG+ P+LV+ N +I LG K G + YSV+ + G KP+
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL---GHKPDE 354
Query: 228 LTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
T+ L+ +K +E +F+ + + N
Sbjct: 355 YTWNALLTALYKANRYEDVLQLFDMIRSEN 384
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 9/240 (3%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL--GDINSALK 74
+E T + + R V AL L D M G+ N S + CLL GDI A
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLS--CLLRNGDIQKAFT 163
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+F E + T+S+++ +++ E A ++ ++ + + F V
Sbjct: 164 VF-EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAIS 222
Query: 135 KQNMLENAY---RLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
+ N Y R+ G I + +TY++L+S G+ A ++ D+M++ ++
Sbjct: 223 LCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISL 282
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+ +I ++ D A + +LKKG+KPN + LI+ K G F V+
Sbjct: 283 REDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVY 342
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 51/306 (16%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KLL M + G PS + +I C R+ + + L + +++ V L+
Sbjct: 332 KLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLI--- 388
Query: 64 CLLGDIN---SALKLFDEIVEAGVAPNAVT-------FSVLIDCSSKIGSMEKAFELYNR 113
L+G +AL++++++++ G PN ++ F++L+ +SK G L N+
Sbjct: 389 WLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNK 448
Query: 114 MKLMGIQP-----------------------------------TVFIVKFLLKGFQKQNM 138
M+ G++P TV LL +K +
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ A+R+ + ++ GI ++ Y + S L G K LL +M SKG+ PS+V++N
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I G R G AY +R+ + ++PN +TY LI+ A+ + + A N
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL--HVKAQN 626
Query: 258 ANLQIT 263
L+++
Sbjct: 627 EGLKLS 632
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 8/204 (3%)
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLL-- 130
LKL + + AGV P+ LI ++ ELY R++ + ++ + L+
Sbjct: 331 LKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWL 390
Query: 131 --KGFQKQNMLENAYRLLDEAVEHGIAS----VVTYNILLSWLCGLGKVVEACNLLDKMM 184
K + LE LLDE E S V +NILLS G LL+KM
Sbjct: 391 MGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKME 450
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
KG+ P +N +++ + A + ++ G KP ++Y L+ K ++
Sbjct: 451 DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYD 510
Query: 245 RAFGVFEQMMAANANLQITQFTPL 268
AF V+ M+ + +T +
Sbjct: 511 EAFRVWNHMIKVGIEPNLYAYTTM 534
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 129 LLKGFQKQNMLENAYRLLD-----EAVEHGI--ASVVTYNILLSWLCGLGKVVEACNLLD 181
++KGF K L+ A ++D ++ G+ ++ YN LL + G G EA +L
Sbjct: 152 MIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EAEKILK 208
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M +G+ P++V+YN +++ + +G A +++ +KG +PN +TY+ + + +
Sbjct: 209 DMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRME 268
Query: 242 DFERAFGVFEQMMAANANLQI 262
D A F ++ A +I
Sbjct: 269 DGMGALEFFVELREKYAKREI 289
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVAT---S 58
A ++ K M G P+ +Y +++ + EA R+ + M+ G+ N+ T S
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ G +++ LK E+ G+ P+ VTF+ +I ++ G A+E ++RMK
Sbjct: 537 VLTGQQKFNLLDTLLK---EMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSEN 593
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
++P + L++ AY L +A G+
Sbjct: 594 VEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 1/231 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+ ++M+ G+ P Y ++ V+ G AL + ++ G+ L+KG C
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
G I L++ + E P+ ++ +I G+++ + +++ M+ I+P V
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKM 183
L+ G K +E Y L E I Y +L+ GKV ACNL + +
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ G + YN +I G C +D AY + +++ L+P+ T +P++
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G +A +L + + G P+ F +LI + + + +Y +MK G +P VF+
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ K + A + ++ E G + T+ IL+ LC G++ E +L +M
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
P + +Y +I +G +D + V + + + +KP+ + Y L+ G K G ER
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 246 AFGVFEQM 253
+ +F +M
Sbjct: 352 GYELFMEM 359
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 128/288 (44%), Gaps = 35/288 (12%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A + ++ + G + T+ ++ + G + E L + M + ++ T+++
Sbjct: 246 LALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
K G+++++L+++DE+ + P+ + + L+ K G +E+ +EL+ MK I
Sbjct: 306 KTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNL 179
I + L++GF + +A L ++ V+ G IA + YN ++ LC + +V +A L
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL---------------- 223
+ + + P + + I++ + + D +V+ RI + G
Sbjct: 426 FQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCAD 485
Query: 224 -KPNALT-----------------YTPLIDGFFKKGDFERAFGVFEQM 253
+ NA+ Y L++ +K GD +++ +F +M
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEM 533
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 6/244 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L EM+ + Y +I V G V A L +++V+SG +I + +++KG
Sbjct: 354 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C + ++ A KLF +E + P+ T S ++ + + + R+ +G +
Sbjct: 414 CSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSD 473
Query: 124 FIVKF---LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
++ +F L +K M + + +L G SV YNIL+ L +G + ++ +L
Sbjct: 474 YLTQFFKLLCADEEKNAMALDVFYILKTK---GHGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M G P SY+ I KG + A S +I++ P+ Y L G +
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 241 GDFE 244
G+ +
Sbjct: 591 GEID 594
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 34/253 (13%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L + M + G PSE + +I + + ++M G + + +M
Sbjct: 177 ADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G + AL ++++ E G+ + TF +L+ K G +E+ E+ RM+ +P
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
VF ++K + L+ + R+ DE
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDE--------------------------------- 323
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M + P +++Y +++G C+ G ++ Y + + K + + Y LI+GF G
Sbjct: 324 -MRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 242 DFERAFGVFEQMM 254
A ++E ++
Sbjct: 383 KVRSACNLWEDLV 395
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
++ V LM+ +GDI +L LF E+ + G P++ ++S+ I C + G ++ A +
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA---VEHGIASVVTYNILLSWLC 168
++ M P++ L KG + ++ L+ E VE G Y + + +C
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPME-FKYALTVCHVC 624
Query: 169 GLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
+ ++D+M +GV + V Y II G + G + A V + K+ + A
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEA 683
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L EMR LG+ P +Y+ I V +G+V A ++++ +I SL KG C
Sbjct: 529 LFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLC 588
Query: 65 LLGDINSALKLFDEI---VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+G+I++ + L E VE+G P +++ + K + EK ++ + M G+
Sbjct: 589 QIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFI 646
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI---ASVVTYNILL 164
I ++ G K ++ A + E + + A +V Y +L
Sbjct: 647 NEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P + T + + G V EA L E+ P + L+K C D++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 73 LKLFDEIVEA-GVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
+ DE+ + V P+ V+F++LID C+SK ++ +A L +++ G +P F+ +
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSK--NLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 130 LKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
+KGF C L K EA + KM +GV
Sbjct: 272 MKGF----------------------------------CTLSKGSEAVGVYKKMKEEGVE 297
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
P ++YN +I G + G +++A + ++ G +P+ TYT L++G +KG
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 59 LMKGHCLLGD--INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
L+ C D I++ ++ + +V G+ P+ VT + + + G +++A +L +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVV 174
P + FLLK K L Y +DE + +V++ IL+ +C +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
EA L+ K+ + G P YN I+ G C +A V ++ ++G++P+ +TY LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 235 DGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
G K G E A + M+ A +T L
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 47 SGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA--GVAPNAVTFSVLID--CSSKIG 102
S +P+++ S+++ + + +N +KLF I+++ P TF +L+ C +
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVTYN 161
S+ + N M G++P ++ + ++ A L+ E E H TYN
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
LL LC + +D+M V P LVS+ +I C + +A +++++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G KP+ Y ++ GF A GV+++M
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
+I ++ G C+LG+++ A + + +I+ + P+ V++ +I+ +K G + KA ELY
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGL 170
M P V I ++ + + A + E E G +VVTYN LL LC +
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 171 GKVVEACNLLDKMMSKG--VTPSLVSYNHIILGHCRKGCMD---------------DAYS 213
+ + L+++M KG +P+ V++++++ R +D D Y+
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYN 425
Query: 214 VMNRIL-----------------KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
+M R+ + GL P+ TYT I G KG A F++MM+
Sbjct: 426 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMS 484
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + K++ A P +Y ++I ++G + +A+ L M ++ ++ + +++
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG--I 119
C I AL++F EI E G PN VT++ L+ KI EK +EL M+L G
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT--YNILLSWLCGLGKVVEAC 177
P +LLK Q+ ++ ++ E + + + YN++ K +
Sbjct: 386 SPNDVTFSYLLKYSQRSKDVD----IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVR 441
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
+ +M G+ P +Y I G KG + +A S ++ KG+ P T
Sbjct: 442 EIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 35/215 (16%)
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
++FDE+ + N T+ VL++ + +++A ++ R K GI + LL
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 134 QKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
+ +E A L + N++L+ C LG V EA +++ P +V
Sbjct: 224 CRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVV 283
Query: 194 SY-----------------------------------NHIILGHCRKGCMDDAYSVMNRI 218
SY N++I C K + +A V I
Sbjct: 284 SYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI 343
Query: 219 LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+KG PN +TY L+ K E+ + + E+M
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 2 AC--KLLKEMRALGWIPSEGTYTSVI-GTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS 58
AC ++L M A PS Y +I G C+ + + EA + + + G + +V T+
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL-EAYCIFKNLKDKGYAPDRVVYTT 323
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
+++G C G + SA KL+ E+++ G+ PN ++V+I K G + YN M G
Sbjct: 324 MIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
T+ ++KGF C GK EA
Sbjct: 384 YGGTMLSCNTMIKGF----------------------------------CSHGKSDEAFE 409
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ M GVTP+ ++YN +I G C++ ++ + + GLKP+ + Y L+
Sbjct: 410 IFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 32 GNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTF 91
G+V E L + + G+ V L+ G C +G+ ++ ++ P+ +
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 92 SVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE 151
+I +A+ ++ +K G P + +++GF ++ L +A +L E ++
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 152 HGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDD 210
G+ + YN+++ G++ ++M+ G +++S N +I G C G D+
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 211 AYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
A+ + + + G+ PNA+TY LI GF K+ E+ +++++ A
Sbjct: 407 AFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ P + +G V EA+ + + + + G+ +++ S++ G ++
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+L E+VE+ + + C G + + +EL + G+ P ++ L+ G
Sbjct: 200 WELHKEMVESEFDSERIRCLIRALCDG--GDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-----SVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
F + Y + E + IA S+ Y ++ LC K +EA + + KG
Sbjct: 258 FCEIG----NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKG 313
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P V Y +I G C KG + A + ++KKG++PN Y +I G FK+G+
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 248 GVFEQMM 254
+ +M+
Sbjct: 374 AFYNEML 380
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
K+LKEM G+ P +Y+ +I R G + +++ + D + + G + V +++
Sbjct: 276 KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNF 335
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
D + +++ + +++ PN T+S L+ K + A E++ M G+ PT
Sbjct: 336 ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDK 182
+V LK A + ++ + G S Y +LL L GK N+ D+
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M G + Y +I+ G C G +++A VM ++KG PN Y+ L
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNK 515
Query: 243 FERAFGVFEQMMAANANLQITQF 265
E A+ +F ++ A A F
Sbjct: 516 TELAYKLFLKIKKARATENARSF 538
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%)
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
GV P+ ++ +D ++ + +A EL+ + G++ + LL+ +++ + A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 143 YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
+ + + +YNI++S LG+V E +L +M+ G P +SY+H+I G
Sbjct: 241 KSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGL 300
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQI 262
R G ++D+ + + I KG P+A Y +I F DF+ + + +M+ +
Sbjct: 301 GRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNL 360
Query: 263 TQFTPL 268
++ L
Sbjct: 361 ETYSKL 366
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +E + G S ++ +++ C+ + + V A + +P + ++
Sbjct: 205 AIELFEESESFGVKCSTESFNALL-RCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMIS 263
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G LG++ K+ E+VE+G P+ +++S LI+ + G + + E+++ +K G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 122 TVFIVKFLLKGFQKQNMLENA----YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEAC 177
+ ++ F + + R+LDE E + TY+ L+S L KV +A
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLE---TYSKLVSGLIKGRKVSDAL 380
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ ++M+S+GV P+ + C G A + + K G + + Y L+
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 238 FKKGDFERAFGVFEQMMAA 256
+ G V+++M +
Sbjct: 441 SRFGKCGMLLNVWDEMQES 459
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + EM PS + S+I + + +AL + +SG P+ +L+
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+C + A K DE+ GV PNA T+ +++ ++ ++A+E+Y + M +P
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY---QTMSCEP 402
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
TV + +++ F + L+ A ++ DE G+ + ++ L++ LC K+ EAC
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 462
Query: 181 DKMMSKGVTPS---LVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
++M+ G+ P +L RK + D M+R+ K L
Sbjct: 463 NEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQL 508
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 7 KEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL 66
+EM+ G+ P Y +I + EA+R +EM + + SL+ G
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
+N AL+ F+ +G A T++ L+ ME A++ + M+L G+ P
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 127 KFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+L + + AY + + E +V TY I++ C ++ A + D+M
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 432
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
KGV P + ++ +I C + +D+A N +L G++P ++ L +G
Sbjct: 433 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ +M+ + P +YT ++ ++ N++ + EM + G +++ ++
Sbjct: 216 AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIIN 275
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
HC A++ F+E+ + P+ F LI+ + A E + R K G
Sbjct: 276 AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL 335
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLL 180
L+ + +E+AY+ +DE G+ + TY+I+L L + + EA +
Sbjct: 336 EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY 395
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M P++ +Y ++ C K +D A + + + KG+ P ++ LI +
Sbjct: 396 QTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 241 GDFERAFGVFEQMM 254
+ A F +M+
Sbjct: 453 NKLDEACEYFNEML 466
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 42/224 (18%)
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ A+ F ++ E G + F+ ++D SK ++ A +++++MK +P +
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 129 LLKGF-QKQNML---ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
LL+G+ Q+ N+L E + DE E VV Y I+++ C K EA ++M
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFE---PDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 185 SKGVTPS-----------------------------------LVSYNHIILGHCRKGCMD 209
+ PS +YN ++ +C M+
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
DAY ++ + KG+ PNA TY ++ + + A+ V++ M
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 1/218 (0%)
Query: 37 ALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLID 96
A L M+ G+ + L+ G C G + A + DE+ G P A +LI+
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 97 CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-A 155
G +E A E+ ++M G P + L++ K +E + A + G+
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
+ TY L+ + +GK+ EA LL+ + G P Y II G CR G DDA+S
Sbjct: 321 DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + K PN YT LI + G F A +M
Sbjct: 381 SDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEM 418
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 2/253 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L++ M G P + TY ++ G + EA DEM G L++
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G + SA ++ ++ + G P+ TF++LI+ SK G +E E+Y +G+
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLL 180
+ K L+ K ++ A+RLL+ VE G + Y ++ +C G +A +
Sbjct: 321 DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
M K P+ Y +I R G DA + + + + GL P + + + DG
Sbjct: 381 SDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNG 440
Query: 241 GDFERAFGVFEQM 253
G + A + EQ+
Sbjct: 441 GKHDLAMRI-EQL 452
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 11/268 (4%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHC 64
L+ +++ P++G Y + I V N+V + +NS +PV +++
Sbjct: 32 LEPLQSSDSTPTKGDYFAAINHVV---NIVRREIHPERSLNSLRLPVTSEFVFRVLRATS 88
Query: 65 LLGDINSALKLFD-EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
N +L+ F+ P ++ + L + E +++ +MK + + +
Sbjct: 89 RSS--NDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISG 146
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA---SVVTYNILLSWLCGLGKVVEACNLL 180
+ F+++ + K ++ A L + V + +V YN LL LC + A L+
Sbjct: 147 ETLCFIIEQYGKNGHVDQAVELFN-GVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALI 205
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ KG+ P +Y ++ G C G M +A ++ + ++G P A LI+G
Sbjct: 206 RRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNA 265
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G E A + +M I F L
Sbjct: 266 GYLESAKEMVSKMTKGGFVPDIQTFNIL 293
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 115/234 (49%), Gaps = 3/234 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++ S++ + + G V +A+ L DEM G+ +I+ SL+ G+ G A+ + +
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
AG+ P+ + S L+ ++ G ++ ++ + + V++ L+ + K L
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
A + D ++V +N L+S L + +A L+ +M +G+ P +++N +
Sbjct: 277 PYARMVFDMM---DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G+ G + A V+ ++ +KG+ PN +++T + G K G+F A VF +M
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 49/269 (18%)
Query: 26 GTCVRQGNVVEALRLKDEM-VNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGV 84
G CV G A +L DEM + N IV +L G + A++LF E+ +G
Sbjct: 34 GRCVSLGF---ANKLFDEMPKRDDLAWNEIVMVNLRSG-----NWEKAVELFREMQFSGA 85
Query: 85 -APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
A ++ +L CS+K G E +++ + +G++ V + L+ + + LE +
Sbjct: 86 KAYDSTMVKLLQVCSNKEGFAE-GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 144 RLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHC 203
++ + + ++S +N +LS LG V +A LLD+M G+ P +V++N ++ G+
Sbjct: 145 KVFNSMKDRNLSS---WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 204 RKGCMDDAYSVMNRILKKGLKP------------------------------NALTY--- 230
KG DA +V+ R+ GLKP N L Y
Sbjct: 202 SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVY 261
Query: 231 --TPLIDGFFKKGDFERAFGVFEQMMAAN 257
T LID + K G A VF+ M A N
Sbjct: 262 VETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 35 VEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVL 94
EAL ++ M G+ + I SL G+ LG AL + ++ E GVAPN V+++ +
Sbjct: 310 AEALMIR--MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 95 IDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG- 153
SK G+ A +++ +M+ G+ P + LLK ++L + + HG
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV------HGF 421
Query: 154 ------IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
I L+ G + A + + +K SL S+N +++G+ G
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFGR 477
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
++ + + +L+ G++P+A+T+T ++ G + + F+ M +
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 16/262 (6%)
Query: 2 ACKLLKEMRAL-------GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNII 54
AC LLK+ AL G P T+ S+ G +AL + +M GV N++
Sbjct: 304 AC-LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 55 VATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
T++ G G+ +ALK+F ++ E GV PNA T S L+ + + E++
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGK 172
+ ++ L+ + K L++A + GI S+ ++N +L G+
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIF-----WGIKNKSLASWNCMLMGYAMFGR 477
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYT 231
E M+ G+ P +++ ++ G + + + + + + G+ P +
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 232 PLIDGFFKKGDFERAFGVFEQM 253
++D + G + A+ + M
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTM 559
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 53 IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN 112
++ A+ G C+ + A KLFDE+ + + + ++ ++ + + G+ EKA EL+
Sbjct: 25 VVSASMGFYGRCV--SLGFANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFR 78
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-NILLSWLCGLG 171
M+ G + + LL+ + ++ + G+ S V+ N L+ G
Sbjct: 79 EMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNG 138
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
K+ + + + M + +L S+N I+ + + G +DDA +++ + GLKP+ +T+
Sbjct: 139 KLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 232 PLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
L+ G+ KG + A V ++M A + + L
Sbjct: 195 SLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSL 231
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHCLLGDINSALK 74
P+ T+ S++ + R+G R+ EM G N+ LM+ +C G ++ A K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+++E+ GV + V ++ +I + KA EL+ M L GI+ T + L+ G+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGL---GKVVEACNLL-DKMMSKGVT 189
K +++ + E G A +T L+ LC +VVEA +++ D +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
PS Y ++ C G MD A ++ ++ KG KP+ TY IDG+ GD E
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEE 477
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL-MGIQPTVFIVKFLLKGFQKQNMLENA 142
+ PNA TF+ ++ + G E ++ M+ +G P V+ L++ + + ++ A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 143 YRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
++ +E G+ +V YN ++ LC +VV+A L M KG+ + ++Y H++ G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+C+ G +D V + +KG + + LT L++G D +R
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM------------K 115
+I+ A+ + ++ G+ T + LI S+ +++Y + K
Sbjct: 177 EIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 116 LMG-IQPTVFIVKFLLKGFQKQ---NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGL 170
++G I+P ++ F ++ M+E +R ++E V G + +V +YN+L+ C
Sbjct: 237 MIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEV--GCSPNVYSYNVLMEAYCAR 294
Query: 171 GKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
G + EA + ++M +GV +V+YN +I G C + A + + KG++ LTY
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTY 354
Query: 231 TPLIDGFFKKGDFERAFGVFEQM 253
L++G+ K GD + V+ +M
Sbjct: 355 EHLVNGYCKAGDVDSGLVVYREM 377
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 49 VPVNIIVATSLMKGHCLLGDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKA 107
+P + +L+ + D A +++ E+ + G+ P+ T++ +I + GS +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSW 166
+ + M+ I+PT ++ GF K+ + +++ E G+ V TYNI++
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 167 LCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
LC K EA L+D +MS + P+ V+Y+ +I G C + +D+A ++ ++ G KP+
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+ Y LI K GDFE A + + M N
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKN 352
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ +MR P TYT+VIG G +A + EM G ++ + ++
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
C+ + A KL DE+V+ G++PNA T+++ S + +++ELY RM P
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLP 384
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLL 180
FL+K F++ ++ A RL ++ V G S + ++LL LC L KV EA L
Sbjct: 385 NTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCL 444
Query: 181 DKMMSKGVTPSLVSYNHIIL 200
+M+ KG PS VS+ I L
Sbjct: 445 LEMVEKGHRPSNVSFKRIKL 464
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGK 172
MK G++P V L+ + K +E AY+L+D+ E V+TY ++ L +G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
+A +L +M G P + +YN I C + DA +++ ++KKGL PNA TY
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 233 LIDGFFKKGDFERAFGVFEQMMAANANLQITQ 264
D R++ ++ +M+ N L TQ
Sbjct: 357 FFRVLSLANDLGRSWELYVRML-GNECLPNTQ 387
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 44 MVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS 103
M G+ +++ SL+ +C +I A KL D++ E P+ +T++ +I IG
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 104 MEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNI 162
+KA E+ MK G P V ++ F L +A +L+DE V+ G++ + TYN+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
L + + L +M+ P+ S +I R +D A + ++ KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 223 L 223
Sbjct: 417 F 417
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI-NSAL 73
I +E +++I + R A+++ +EM G P ++ +L+ CL D+
Sbjct: 99 IKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVP 157
Query: 74 KLFDEIVEA--GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
+LFDE + + P+ +++ +LI G EKA E+ M++ G++ T+ +L
Sbjct: 158 QLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILG 217
Query: 132 GFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEAC-NLLDKMMSKGVT 189
K +++ A L E V G YN+ L + + E L+++M S G+
Sbjct: 218 SLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRL--MNAAKESPERVKELMEEMSSVGLK 275
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL-KPNALTYTPLIDGFFKKGDFERAFG 248
P VSYN+++ +C KG M +A V +GL +PNA T+ LI G +++
Sbjct: 276 PDTVSYNYLMTAYCVKGMMSEAKKVY-----EGLEQPNAATFRTLIFHLCINGLYDQGLT 330
Query: 249 VFEQ 252
VF++
Sbjct: 331 VFKK 334
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 8/268 (2%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+KEM +G P TYTS+I G + +A RL EM +N + + +++G C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 65 LLGDINSALKLFDEIVEAG----VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
GD+ AL+L E+ + ++PNAVT++++I + +E+A + +RM G
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 121 PTVFIVKFLLKG-FQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACN 178
P L++G + ++ +L+D+ V+ G S+ ++ L + + EA
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKP--NALTYTPLIDG 236
+ M+ +GV P ++ +H+ C D + + I KK +K ++ + L+ G
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 237 FFKKGDFERAFGVFEQMMAANANLQITQ 264
++G+ A + + M+ L+++
Sbjct: 427 LCQQGNSWEAAKLAKSMLDKKMRLKVSH 454
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 116 LMGIQPTVFIVKFLLKGFQKQN------------MLENAYRLLDEAV-------EHGI-A 155
++ I+ ++K++++ ++K+ L N L DEA+ E + A
Sbjct: 104 ILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCA 163
Query: 156 SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVM 215
V YN+++ G + A L+ +M G+ P +++Y +I G+C G +DDA+ +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 216 NRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ K N++TY+ +++G K GD ERA + +M
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
Y VI +G++ A L EM G+ ++I TS++ G+C G I+ A +L E+
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM 226
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG----IQPTVFIVKFLLKGFQK 135
+ N+VT+S +++ K G ME+A EL M+ I P +++ F +
Sbjct: 227 SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCE 286
Query: 136 QNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACN-LLDKMMSKGVTPSLV 193
+ +E A +LD G + + VT +L+ + + V+A + L+DK++ G
Sbjct: 287 KRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSE 346
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
++ + R ++A + +L +G++P+ L
Sbjct: 347 CFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLA 382
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L MR G +P Y +I VR A R+ + V + +N + S+ K
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 62 G---HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA-FE-LYNRMKL 116
CL + A L ++V G N+ +S + IG EK FE L + +
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKIT-----IGYNEKQDFEDLLSFIGE 316
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVE 175
+ +P VF+ +L ++ E AY ++E G VT+ IL+ W C G +
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A L ++MSKG P + SYN I+ G RKG + +++ + + G+ + T+ ++
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 236 GFFKKGDFERAFGVFEQMMA 255
G+ K FE A + +M
Sbjct: 437 GYCKARQFEEAKRIVNKMFG 456
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 6 LKEMRALGWIPSEGT--YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
LKE LG G Y +I R N +E ++ EM GV + L+ G+
Sbjct: 895 LKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGY 954
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
D +S+L+ ++ G+ PN + + G ++KA +L+ M+ G
Sbjct: 955 SSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGS 1014
Query: 124 FIVKF-LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
+V+ +++ + + A L +G+ + Y+ ++ L G + A +LL+
Sbjct: 1015 SVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP-NYDNIIKKLSDRGNLDIAVHLLNT 1073
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
M+ P SY+ +I G R +D A +++ GL P+ T++ L+ F
Sbjct: 1074 MLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKF 1128
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 10/248 (4%)
Query: 14 WIPSEGTYT-SVIGTCVR---QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL--G 67
W+ G + S +C++ NV +AL + + + +N+ + S++ CL+ G
Sbjct: 123 WMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILS--CLVKNG 180
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLI-DCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
++S +KLFD++ G+ P+ VT++ L+ C KA EL + GIQ +
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 127 KFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+L E A + + VE ++ Y+ LL+ G +A L+ +M S
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS 300
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G+ P+ V ++ + + G D + +++ + G N + Y L+DG K G E
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 246 AFGVFEQM 253
A +F+ M
Sbjct: 361 ARSIFDDM 368
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 7 KEMRALGWIPSEGT------YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
K + +G +P G Y +V+ C G EA +M G NI +SL+
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ GD A +L E+ G+ PN V + L+ K G +++ EL + ++ G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYN-ILLSWLCGLGKVVEACNL 179
L+ G K LE A + D+ G+ S N I++S LC + EA L
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ LV N ++ +CR G M+ +M ++ ++ + P+ T+ LI F K
Sbjct: 400 SRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Query: 240 K 240
+
Sbjct: 460 E 460
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+++ AL+++ I + N + ++ C K G ++ +L+++MK G++P V
Sbjct: 146 NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN 205
Query: 128 FLLKGFQK-QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
LL G K +N A L+ E +GI V Y +L+ G+ EA N + +M
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+G +P++ Y+ ++ + KG A +M + GL PN + T L+ + K G F+R
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 246 AFGVFEQMMAA 256
+ + ++ +A
Sbjct: 326 SRELLSELESA 336
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +++M+ G P+ Y+S++ + +G+ +A L EM + G+ N ++ T+L+K
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + + +L E+ AG A N + + +L+D SK G +E+A +++ MK G++
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS 375
Query: 122 TVFIVKFLLKGFQKQNMLENAYRL-LDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
+ ++ + + A L D + +V N +L C G++ ++
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 181 DKMMSKGVTPSLVSYNHIILGH 202
KM + V+P ++ HI++ +
Sbjct: 436 KKMDEQAVSPDYNTF-HILIKY 456
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
L++MR G++ Y +VI + V+ G + A + EMV + +++V L+
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ----P 121
G++ A+ + + EAG+ N+V ++ LI +K+G +++A +Y ++ L P
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL-LQSCNKTQYP 681
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
V+ ++ + +++M+ A + D + G A+ T+ ++L G+ EA +
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+M + +SYN ++ G +A ++ G++P+ T+ L K G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 242 DFERAFGVFEQM 253
++A E++
Sbjct: 802 MSKKAVRKIEEI 813
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
AC+L + M + G P + TY +++ + ++M +G + I +++
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
LG +N A +++ E+VE + P+ V + VLI+ + G++++A MK GI
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 122 TVFIVKFLLKGFQKQNMLENA---YR-LLDEAVEHGIASVVTYNILLSWLCGLGKVVEAC 177
I L+K + K L+ A YR LL + V T N +++ V +A
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 178 NLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
+ D M +G ++ ++ + + G ++A + ++ + + + L+Y ++ F
Sbjct: 704 AIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 238 FKKGDFERAFGVFEQMMAANANLQITQFTPL 268
G F+ A F++M+++ + F L
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
L+DE++ G+ P T+ LID SK G A +M +G+QP +L+ ++
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 135 KQNMLENAYRLL-------DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
K + A ++A H S TYN ++ G++ EA +M+ +G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 188 VTPSLVSYNHII--------LG--------------------------HCRKGCMDDAYS 213
+ P+ V++N +I LG H + ++ A +
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 214 VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
+ GLKP+ ++Y L+ F + E A G+ +M + N++I ++T
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM--DDDNVEIDEYT 439
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
MA ++ KEM P Y +I GNV +A+ + M +G+P N ++ SL+
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 61 KGHCLLGDINSALKLFDEIVEA---GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
K + +G ++ A ++ +++++ P+ T + +I+ S+ + KA +++ MK
Sbjct: 653 KLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR 712
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
G + F +L ++K E A ++ + E I ++YN +L G+ EA
Sbjct: 713 G-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
+M+S G+ P ++ + + G A + I KK +K
Sbjct: 772 VETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 108/267 (40%), Gaps = 12/267 (4%)
Query: 2 ACK------LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIV 55
ACK L EM G P TY ++I + G V AL +M G+ + +
Sbjct: 200 ACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVT 259
Query: 56 ATSLMKGHCLLGDINSALKLF------DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFE 109
+++ + + A + F + ++ V ++ T++ +ID K G +++A E
Sbjct: 260 TGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASE 319
Query: 110 LYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCG 169
+ RM GI PT ++ + L L+ H TYNIL+S
Sbjct: 320 TFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTK 379
Query: 170 LGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
+ A +M G+ P VSY ++ + +++A ++ + ++ + T
Sbjct: 380 NNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 230 YTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ L + + E+++ F++ A
Sbjct: 440 QSALTRMYVEAEMLEKSWSWFKRFHVA 466
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
KEM+ G P +Y +++ + V EA L EM + V ++ ++L + +
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
+ + F AG ++ +S ID + G + +A ++ + + + TV
Sbjct: 450 AEMLEKSWSWFKRFHVAGNM-SSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIE 507
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMM 184
++K + E A L + + +G+ TYN L+ L + L+KM
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
G + Y +I + G ++ A V +++ ++P+ + Y LI+ F G+ +
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 245 RAFGVFEQMMAA 256
+A E M A
Sbjct: 628 QAMSYVEAMKEA 639
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + +++ G P E Y ++I V G RL EM + + V +L++
Sbjct: 438 ATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLR 497
Query: 62 GHCLLGDINSALKLFDEIVEAGVAP-NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ +GD N A + + A P + +S+ ++ K G ++KA ++ M+ +G +
Sbjct: 498 AYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHK 557
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P + L++ ++ +N L+ A RLL + + GI V+TY +L+ W+ LG + EA L
Sbjct: 558 PDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQL 617
Query: 180 LDKMMSKGVTP 190
L K+ G P
Sbjct: 618 LVKISQLGEAP 628
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 3/243 (1%)
Query: 29 VRQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
+R+GN L++ + +++ +I + L+ H I ++ ++ + G+ P+
Sbjct: 359 LREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPD 418
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
+T + L+ SK G+ E+A E + +K G++P I + ++ G+ + RL+
Sbjct: 419 ILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMK 478
Query: 148 EAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP-SLVSYNHIILGHCRK 205
E + AS Y LL +G A + M P S +Y+ + + +
Sbjct: 479 EMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKA 538
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQF 265
G +D A S + + K G KP+ L+ + + ++A + Q+ + + +
Sbjct: 539 GQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITY 598
Query: 266 TPL 268
T L
Sbjct: 599 TVL 601
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 99/228 (43%), Gaps = 2/228 (0%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
Y+ +I ++ ++ + R+ +M +G+ +I+ AT+L+ + G+ A + F+ +
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
G+ P+ + +I G + L M+ ++ + + LL+ + +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 141 NAYRLLD--EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
A + + G S Y++ + G+V +A + D+M G P ++
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANL 566
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERA 246
+ + + +D A ++ ++ K G++ +TYT L+D G E A
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEA 614
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 10/258 (3%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+LK+ R LG P Y + I + + EA + + +V+ P++ + +L+ G
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSV 338
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CS-SKIGSMEKAFELYNRMKLMG-IQ 120
D +SA++ +V G P T S L C K + KA+EL + +Q
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNL 179
++ FL K + +Y L E + G+A V+ YN L+ C + A L
Sbjct: 399 SYSLMISFLCKA----GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
D+M +G +L +YN +I +G +++ + +++L++G++P+ Y LI+G K
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Query: 240 KGDFERAFGVFEQMMAAN 257
+ E A VF + M +
Sbjct: 515 ETKIEAAMEVFRKCMERD 532
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 44 MVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS 103
MV++G I + L K C + +K ++ + G ++S++I K G
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 104 MEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNI 162
+ +++ MK G+ P V + L++ K M+ A +L DE G ++ TYN+
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
L+ L G+ E+ L DKM+ +G+ P Y +I G C++ ++ A V + +++
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 223 LK 224
K
Sbjct: 533 HK 534
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ +Y+ +I + G V E+ EM G+ ++ + +L++ C I A
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
KL+DE+ G N T++VLI S+ G E++ L+++M GI+P I L++G
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSW---LCGLGKVVEACNLL 180
K+ +E A + + +E VT +L + LC G EA LL
Sbjct: 512 LCKETKIEAAMEVFRKCMERD-HKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 14 WIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
++PS Y ++ V++A +L +M N G +++ T+L+ G+C + ++ A
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAF----ELYNRMK---LMGIQPTVFIV 126
K+FDE+ G+ PN++T SVLI K+ +E EL+ MK ++ F
Sbjct: 218 KVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF-- 275
Query: 127 KFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
L+ ++ + + + + ++ + Y ++ LC + A ++ M S
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
KG+ P SYN II G C+ G AY ++ + P+ TY L++ K+ D +
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 246 AFGVFEQMM 254
A V E M+
Sbjct: 396 ARNVLELML 404
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGV-PVNIIVATSLMKGHCLLGDINSALK 74
P E T +VI + G V +A+++ D+M+ + + ++M G G AL
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 75 LFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
+ + ++ E + P V ++ +I K+ ++A ++ +++ + ++ G
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 134 QKQNMLENAYRLLDEAV-EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
N ++ A + D+ + G Y L LC G + +AC+ L + G P++
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
V YN +I R G +AY ++ + K G P+A+T+ L
Sbjct: 625 VCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 32/217 (14%)
Query: 28 CVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
C + N EALR+ D + G + + +S++ C G + A + F + +G P+
Sbjct: 65 CAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPD 124
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
T +V+I A LY+R + T+ ++ L+ GF+K+
Sbjct: 125 ERTCNVII-----------ARLLYSRSPV----STLGVIHRLI-GFKKE----------- 157
Query: 148 EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ S+ YN L++ LC + +V++A L+ M ++G P +V++ +I G+C
Sbjct: 158 -----FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRE 212
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
++ A+ V + + G++PN+LT + LI GF K D E
Sbjct: 213 LEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 120/299 (40%), Gaps = 47/299 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL+ +MR G +P T+T++IG + A ++ DEM G+ N + + L+
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 62 GHCLLGDINSALKLFDEIVE-----AGVAPNAVTFSVLIDCSSKIGSMEKAFEL------ 110
G + D+ + KL E+ E + A F+ L+D + G FE+
Sbjct: 241 GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL 300
Query: 111 -------------------YNR----------MKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
Y R MK G++P ++ G K
Sbjct: 301 CESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 142 AYRLLDEAVE-HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
AY+LL+E E S TY +L+ LC +A N+L+ M+ K YN +
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 201 GHCRKGCMDDAYSVMN---RILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
G C MD+ ++N +L+ +P+ T +I+G K G + A V + MM
Sbjct: 421 GLC---VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTG 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 9/254 (3%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
E Y +I + R A R+ M + G+ +++ G C G A +L +
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 78 EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
E E P+ T+ +L++ K KA + M I L+G
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC--- 423
Query: 138 MLENAYRLLDEAVE----HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMS-KGVTPSL 192
+++N +L+ V T N +++ LC +G+V +A +LD MM+ K P
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDA 483
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLIDGFFKKGDFERAFGVFE 251
V+ N ++ G +G ++A V+NR++ + +KP + Y +I G FK + A VF
Sbjct: 484 VTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFG 543
Query: 252 QMMAANANLQITQF 265
Q+ A+ T +
Sbjct: 544 QLEKASVTADSTTY 557
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+F + E+ + + ++++I K G ++A ++ + + G+QP V +++ F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 135 KQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
L A +L E + G + +TYN ++ LC K+ +A + V+ S
Sbjct: 60 S---LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++N +I G+C+ + D ++ + ++G+ N +TYT LI GF + GDF A +F++M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 254 MA 255
++
Sbjct: 168 VS 169
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ G C G + A +F ++ +G+ P+ T++++I + S+ +A +LY M G
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRG 75
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
+ P ++ G KQN L A ++ S T+N L++ C +V + N
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFNTLINGYCKATRVKDGMN 127
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L +M +G+ ++++Y +I G + G + A + ++ G+ +++T+ ++
Sbjct: 128 LFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Query: 239 KKGDFERAFGVFEQ---MMAANANL 260
+ + +A + Q M++ N L
Sbjct: 188 SRKELRKAVAMLLQKSSMVSNNVTL 212
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEA--------------------LRLK 41
A KL EM G +P TY S+I +Q + +A R+K
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVK 123
Query: 42 D------EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLI 95
D EM G+ N+I T+L+ G +GD N+AL +F E+V GV +++TF ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 96 D--CSSK 100
CS K
Sbjct: 184 PQLCSRK 190
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G P TY +I R ++ A +L EM+ G+ + I S++ G C + A
Sbjct: 44 GLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
K V+ + TF+ LI+ K ++ L+ M GI V L+ G
Sbjct: 100 RK---------VSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 133 FQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL---DKMMSKGV 188
F++ A + E V +G+ +S +T+ +L LC ++ +A +L M+S V
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Query: 189 T 189
T
Sbjct: 211 T 211
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 12/253 (4%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS T+ ++ V N+ +A+ +K++M G V+ +V + LM G D + LKL
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 76 FDEIVE--AGVAPNAVTFSVLIDCSSKIGSMEK-AFELYNRM--KLMGIQPTVFIVKFLL 130
+ E+ E G + V + L+ + MEK A E Y + ++ + ++L
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYF-MKEMEKEAMECYEEAVGENSKVRMSAMAYNYVL 317
Query: 131 KGFQKQNMLENAYRLLD------EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
+ + + A +L D H ++ T+N++++ C GK EA + +M
Sbjct: 318 EALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG 377
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
+P +S+N+++ C + +A + + +K +KP+ TY L+D FK+G +
Sbjct: 378 DFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKID 437
Query: 245 RAFGVFEQMMAAN 257
++ M+ +N
Sbjct: 438 EGAAYYKTMVESN 450
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 9/227 (3%)
Query: 36 EALRLKDEMV--NSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAP-----NA 88
EA+ +E V NS V ++ + +++ G + ALKLFD + + P N
Sbjct: 291 EAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNL 350
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
TF+V+++ G E+A E++ +M P L+ +L A +L E
Sbjct: 351 GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGE 410
Query: 149 AVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
E + TY +L+ GK+ E M+ + P+L YN + + G
Sbjct: 411 MEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK 470
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+DDA S + ++ K LK + Y ++ + G + + ++M+
Sbjct: 471 LDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 74/188 (39%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
GT+ ++ G EA+ + +M + + + +LM C + A KL+ E
Sbjct: 351 GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGE 410
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ E V P+ T+ +L+D K G +++ Y M ++P + + L K
Sbjct: 411 MEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK 470
Query: 139 LENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
L++A D V Y ++ L G++ E ++D+M+
Sbjct: 471 LDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEF 530
Query: 199 ILGHCRKG 206
+ RKG
Sbjct: 531 VKEELRKG 538
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 46/271 (16%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
+R+ ++ EA V S I +++ + L+L I +AG+APN
Sbjct: 106 IRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNI 165
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNR-MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
+T++++ + E A E Y + + P++ + L+KG + LE A + +
Sbjct: 166 ITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKE 225
Query: 148 E-AVEHGIASVVTYNILL-----------------SWLCGLGKVVEACNLLDKMM----- 184
+ AV+ + V Y+ L+ LG V+ + ++M
Sbjct: 226 DMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFM 285
Query: 185 -----------------SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNA 227
+ V S ++YN+++ G D+A + + + K+ P
Sbjct: 286 KEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRH 345
Query: 228 L-----TYTPLIDGFFKKGDFERAFGVFEQM 253
L T+ +++G+ G FE A VF QM
Sbjct: 346 LAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L EMR P TY+++I + ++G AL +M V ++++ ++L+
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 232
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ L D + A+ +F + +G+ P+ V ++ +I+ K +A L M G+
Sbjct: 233 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P LL + + + A + E E A + T NI++ L V EA L
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ + P++VSYN I+ + +A + + +K ++ N +TY +I + K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 240 KGDFERAFGVFEQMMA 255
+ E+A + ++M +
Sbjct: 413 TMEHEKATNLVQEMQS 428
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L+KEM G +P+ +Y++++ V +EAL + EM +++ ++ +
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
L + A +LF + + + PN V+++ ++ + +A L+ M+ I+ V
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM 183
++K + K E A L+ E GI + +TY+ ++S GK+ A L K+
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
S GV V Y +I+ + R G M A R+L + P+ + I K G
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRETAITILAKAGRT 517
Query: 244 ERAFGVFEQMMAANANLQITQF 265
E A VF Q + I+ F
Sbjct: 518 EEATWVFRQAFESGEVKDISVF 539
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + ++ G P Y S+I + EA L EM +GV N + ++L+
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ AL +F E+ E A + T +++ID ++ +++A L+ ++ M I+P
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V +L+ + + + A L I +VVTYN ++ + +A NL+
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M S+G+ P+ ++Y+ II + G +D A ++ ++ G++ + + Y +I + +
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 241 G 241
G
Sbjct: 484 G 484
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 67 GDINSALKLFDEI-VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
D +L L D + EA P+ ++V++ + + A L++ M+ + P +
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ F K+ M ++A L + + ++ +V Y+ L+ L +A ++ ++
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
G+TP LV+YN +I + + +A ++ + + G+ PN ++Y+ L+ + + F
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 245 RAFGVFEQMMAANANLQIT 263
A VF +M N L +T
Sbjct: 313 EALSVFAEMKEVNCALDLT 331
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 113/252 (44%), Gaps = 3/252 (1%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +R + P+ +Y +++ EA+ L M + N++ +++K
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ + A L E+ G+ PNA+T+S +I K G +++A L+ +++ G++
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ + ++ +++ ++ +A RLL E + + ++ L G+ EA +
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHEL---KLPDNIPRETAITILAKAGRTEEATWVFR 525
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+ G + + +I + R + V ++ G P++ +++ + K+
Sbjct: 526 QAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQR 585
Query: 242 DFERAFGVFEQM 253
+FE+A V+ +M
Sbjct: 586 EFEKADTVYREM 597
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEA 176
I PT ++ GF KQ+ +++A R+LD G + VVT++ L++ C +V
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+ +M +G+ + V+Y +I G C+ G +D A ++N ++ G+ P+ +T+ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 237 FFKKGDFERAFGVFEQMMAA 256
K + +AF + E + +
Sbjct: 125 LCSKKELRKAFAILEDLQKS 144
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 12 LGW--IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
L W P+ TY S+I +Q V +A R+ D M + G +++ ++L+ G+C +
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
++ +++F E+ G+ N VT++ LI ++G ++ A +L N M G+ P +
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 130 LKGFQKQNMLENAYRLLDE 148
L G + L A+ +L++
Sbjct: 122 LAGLCSKKELRKAFAILED 140
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENA 142
+ P +T++ +ID K ++ A + + M G P V L+ G+ K ++N
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 143 YRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
+ E GI A+ VTY L+ C +G + A +LL++M+S GV P ++++ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 202 HCRKGCMDDAYSVMNRILK 220
C K + A++++ + K
Sbjct: 125 LCSKKELRKAFAILEDLQK 143
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 54 IVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNR 113
I S++ G C ++ A ++ D + G +P+ VTFS LI+ K ++ E++
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 114 MKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGK 172
M GI L+ GF + L+ A LL+E + G+A +T++ +L+ LC +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 173 VVEACNLLDKM 183
+ +A +L+ +
Sbjct: 131 LRKAFAILEDL 141
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L M + G P T++++I + V + + EM G+ N + T+L+ G
Sbjct: 31 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 90
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLID--CSSKIGSMEKAFELYNRMK 115
C +GD+++A L +E++ GVAP+ +TF ++ CS K + KAF + ++
Sbjct: 91 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK--ELRKAFAILEDLQ 142
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 42/71 (59%)
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
M+ + P+ ++YN +I G C++ +DDA +++ + KG P+ +T++ LI+G+ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 243 FERAFGVFEQM 253
+ +F +M
Sbjct: 61 VDNGMEIFCEM 71
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
C D+ A+K D + G+ ++ T+S LI C ++ + + + G +P +
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKM 183
F+V L+ + K N+L +A++L D+ + +V+++ ++S +A LL M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQR---NVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 184 MSKGVTPSLVSYNHIILGHCRKGC--MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+ V P++ +Y+ ++ + C M D + I+K+GL+ + + LID F K G
Sbjct: 154 LRDNVRPNVYTYSSVL-----RSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 242 DFERAFGVFEQMMAANA 258
+ E A VF++M+ +A
Sbjct: 209 EPEDALSVFDEMVTGDA 225
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A +L K M+ G+I + T TSV+ C G + L ++ + ++I+ +L+
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACT--GLALLELGMQAHVHIVKYDQDLILNNALV 300
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+C G + AL++F+++ E V +T+S +I ++ G ++A +L+ RMK G +
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDV----ITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVE-HGIASVVT-YNILLSWLCGLGKVVEACN 178
P + +L +LE+ + + +GI V Y ++ L GK+ +A
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCR 204
LL++M + P V++ +LG CR
Sbjct: 417 LLNEMECE---PDAVTWR-TLLGACR 438
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 49/288 (17%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K + +++ G TY+ +I C+ V E + + +G + + L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ +N A +LFD++ + N ++++ +I SK +KA EL M ++P
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 122 TVFIVKFLLK---GFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
V+ +L+ G ML ++ E +E + V + L+ LG+ +A +
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCG--IIKEGLE---SDVFVRSALIDVFAKLGEPEDALS 215
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP------ 232
+ D+M VT + +N II G + D A + R+ + G T T
Sbjct: 216 VFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 233 ---------------------------LIDGFFKKGDFERAFGVFEQM 253
L+D + K G E A VF QM
Sbjct: 272 GLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 47/241 (19%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ TY+SV+ +C + + L ++ G+ ++ V ++L+ LG+ AL +
Sbjct: 160 PNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FDE+V +A+ ++ +I ++ + A EL+ RMK G + +L+
Sbjct: 217 FDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 136 QNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+LE L +A H +V Y+ L+
Sbjct: 273 LALLE----LGMQAHVH----IVKYD----------------------------QDLILN 296
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA 255
N ++ +C+ G ++DA V N++ ++ + +T++ +I G + G + A +FE+M +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 256 A 256
+
Sbjct: 353 S 353
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 34/280 (12%)
Query: 5 LLKEMRALGWIPSEGTYTSVI----------------GTCVRQG---NVVEALRLKDEMV 45
+M G+ P+E T +SVI G CV+ G NV L D
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 46 NSGV------------PVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
G+ N + +L+ GH AL+LF ++ G P+ +++
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
L S G +E+ ++ M G + F LL + K + +A ++ D +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR- 326
Query: 154 IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYS 213
VV++N LL+ G EA ++M G+ P+ +S+ ++ G +D+ +
Sbjct: 327 --DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 214 VMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ K G+ P A Y ++D + GD RA E+M
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 25/246 (10%)
Query: 14 WIPSEGT-YTSVIGTCVR-----QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
+IP++ Y +++ C QG +V A ++ S +I++ +L+ + G
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHA-----HILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
+ A K+F+++ + + VT++ LI S+ A +N+M G P F +
Sbjct: 110 SLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-NILLSWLCGLGKVVEACNLLDKMMSK 186
++K + ++L V+ G S V + LL G + +A + D + S+
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 187 GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI-----DGFFKKG 241
+ VS+N +I GH R+ + A + +L+ G +P+ +Y L GF ++G
Sbjct: 226 ----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 242 DFERAF 247
+ A+
Sbjct: 282 KWVHAY 287
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 32 GNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTF 91
G V A L D+M + N+I+ +++ G+ G A+ +F E++ V P+ ++
Sbjct: 271 GQVATAKILFDKMKSP----NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 92 SVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE 151
+ I +++GS+E+A +Y + + VFI L+ F K +E A + D ++
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 152 HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
VV ++ ++ G+ EA +L M GV P+ V++ +++ G + +
Sbjct: 387 R---DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ NR+ + P Y +ID + G ++A+ V + M
Sbjct: 444 WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 45 VNSGVPV---NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI 101
V G+P+ I+ T+++ + G+ AL++F ++ + V P+ V +++ + +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 102 GSMEKAFELYNRMKLMG--IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT 159
+++ ++ + MG I+P + I L + K + A L D+ +++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKS---PNLIL 290
Query: 160 YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
+N ++S G EA ++ +M++K V P +S I + G ++ A S+ +
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ + + + LID F K G E A VF++ +
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
+ K+ EM+ G PS + S+I + + G + ALRL DEM SG N + T +++
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
H G + A+ +F ++ +AG P T+S L++ + G ++ A ++YN M G++P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ LL + +++ A ++L E G + V + +L V A L
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLR 546
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
M S G+ + + + G D A ++ ++ K + + YT ++
Sbjct: 547 FMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
TY +I + + G + A +L +M + + V +SL+ G +++++K++ E
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+ G P+A F LID +K G ++ A L++ MK G +P + +++ K
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 139 LENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
LE A + + + G + + TY+ LL G G+V A + + M + G+ P L SY
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL ++M+ PS ++S++ + + G + ++++ EM G + + SL+
Sbjct: 332 AFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G +++AL+L+DE+ ++G PN ++++I+ +K G +E A ++ M+ G P
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
T LL+ +++A ++ + G+ + +Y LL+ L V A +L
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M + G + + + + +++ + + +D A + + G+K N L + K
Sbjct: 512 LEMKAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKN 570
Query: 241 GDFERAFGVFEQMMAANANLQITQFTPL 268
G ++ A + E ++ + + + +T +
Sbjct: 571 GLYDSARPLLETLVHSAGKVDLVLYTSI 598
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A ++++ + + + T+ ++I +K G ++ AF+L+ +MK ++P+ + L+
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 132 GFQKQNMLENAYRLLDEAVEHG-IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
K L+ + ++ E G S + L+ GK+ A L D+M G P
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+ Y II H + G ++ A +V + K G P TY+ L++ G + A ++
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 251 EQMMAANANLQITQFTPL 268
M A ++ + L
Sbjct: 477 NSMTNAGLRPGLSSYISL 494
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M+ + P TYTS + ++G+ + +EM +G N++ T +M
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ AL +++++ E G P+A +S LI SK G + A E++ M G++ V +
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 129 LLKGFQKQNMLENAYRLL----DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
++ + E A RLL DE E +V TY LL C K+ LL M+
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMV 478
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
V+ + +Y +I G C G +++A ++KG+ P T L+D KK
Sbjct: 479 KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 535
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 11/241 (4%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHCLLGDINSA----L 73
T + V+ + G +A+ EM S GV + I SLM I A L
Sbjct: 204 DTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFL 263
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
KLFD I P+A TF++LI K + A + + MK+ P V ++ +
Sbjct: 264 KLFDTI-----KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAY 318
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K+ +L+E E+G +VVTY I++ L +V EA + +KM G P
Sbjct: 319 CKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
Y+ +I + G DA + + +G++ + L Y +I E A + ++
Sbjct: 379 KFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR 438
Query: 253 M 253
M
Sbjct: 439 M 439
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 7/246 (2%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVP--VNIIVATSLMKGHCLLGDIN 70
G++ S TY +++ + N L +EM + V + + +M+ G N
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYN 220
Query: 71 SALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTVFIVKF 128
A+ F E+ ++ GV + + + L+D K S+E A E++ +KL I+P
Sbjct: 221 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--LKLFDTIKPDARTFNI 278
Query: 129 LLKGFQKQNMLENAYRLLD-EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L+ GF K ++A ++D V VVTY + C G +L++M G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P++V+Y ++ + + +A V ++ + G P+A Y+ LI K G F+ A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 248 GVFEQM 253
+FE M
Sbjct: 399 EIFEDM 404
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 4/241 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P T+ +I + +A + D M + +++ TS ++ +C GD ++
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+E+ E G PN VT+++++ K + +A +Y +MK G P L+ K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 136 QNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMS---KGVTPS 191
++A + ++ G+ V+ YN ++S + A LL +M + +P+
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+ +Y ++ C K M +++ ++K + + TY LI G G E A FE
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 252 Q 252
+
Sbjct: 511 E 511
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L+EMR G P+ TYT V+ + + V EAL + ++M G + +SL+
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL---MGIQ 120
G A ++F+++ GV + + ++ +I + E A L RM+
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P V LLK + ++ LL V++ ++ V TY +L+ LC GKV EAC
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 180 LDKMMSKGVTP 190
++ + KG+ P
Sbjct: 509 FEEAVRKGMVP 519
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM------KLMGIQPTVFIVKFLLKGFQ 134
+ G + T++ ++D K + + +EL N M KL+ + +++ L K
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKS-G 217
Query: 135 KQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
K N +A+ ++++ +G+ + + N L+ L + A + K+ + P
Sbjct: 218 KYNKAVDAFLEMEKS--YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDAR 274
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++N +I G C+ DDA ++M+ + P+ +TYT ++ + K+GDF R + E+M
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 254 MAANANLQITQFT 266
N + +T
Sbjct: 335 RENGCNPNVVTYT 347
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 51 VNIIVATSLMKG--HCLLGDINSALKLFDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKA 107
+N IV S+++ HC G+I+ AL++F E+ E G+ ++++++ ++ K +++A
Sbjct: 75 LNTIVMNSVLEACVHC--GNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEA 132
Query: 108 FELYNRMKLMGIQPTVFIVKFLLKGF----------QKQNMLENAYRLLDEAVEHGIASV 157
F++ ++ T + L+ G ++ N L Y +L ++HG SV
Sbjct: 133 FQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDIL--LLDHGTPSV 190
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNR 217
+ YN+L+ A NLLD+M+ + P ++YN +I + G +D A N
Sbjct: 191 LIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFND 250
Query: 218 ILKKG-------LKPNALTYTPLIDGFFKKGDFERAFGVFEQM-MAANANLQITQFT 266
+ +K L+P+ +TYT L+ GF D +F +M + N + T FT
Sbjct: 251 MKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFT 307
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 25/266 (9%)
Query: 23 SVIGTCVRQGNVVEALRLKDEMVNS-GVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
SV+ CV GN+ ALR+ EM G+ V+ I +++KG I+ A ++ E +E
Sbjct: 82 SVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQML-ETIE 140
Query: 82 AGVAPNAVTFSV-----LIDCSSKIGSMEKAFELYNRMKLMGIQ---PTVFIVKFLLKGF 133
G A S L+D G + +A L R ++ + P+V I L+KG+
Sbjct: 141 YGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLMKGY 200
Query: 134 QKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG----- 187
+ A LLDE + + +TYN L+ G + A + M K
Sbjct: 201 VNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYD 260
Query: 188 --VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNAL----TYTPLIDGFFKKG 241
+ P +V+Y ++ G G D S+ L+ L N +T ++D K G
Sbjct: 261 DFLQPDVVTYTTLVKGF---GDATDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCG 317
Query: 242 DFERAFGVFEQMMAANANLQITQFTP 267
A VF +++ + ++ + P
Sbjct: 318 STSGALCVFGEILKRSGANEVLRPKP 343
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 86 PNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF----QKQNMLEN 141
P+ +S LI K G A L++ MK G +P + L+ K LE
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 142 AYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
LD+ +E +VVTYNILL GKV + L + V+P + ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
+ + G + + +V+ R+ KP+ +T+ LID + KK +FE+ F+ +M +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 260 LQITQFTPL 268
+ F +
Sbjct: 311 PTLPTFNSM 319
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 4 KLLKEMRALGW-IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
++ + M+ W IP G Y+ +I ++G A+ L EM NSG + V +L+
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 63 HCLLGDINSALKLFDEIVE--AGV---APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
H D AL+ ++ G+ PN VT+++L+ ++ G +++ L+ + +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
+ P V+ ++ + K M++ +L + ++T+N+L+ + +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+M P+L ++N +I+ + + +D A V ++ P+ +TY +I
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM 357
Query: 237 FFKKGDFERAFGVFEQMMAANANLQIT 263
+ G RA +FE++ ++ L+ +
Sbjct: 358 YGYCGSVSRAREIFEEVGESDRVLKAS 384
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 39/280 (13%)
Query: 10 RALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
R G +P T+ +V+ C + + + +++ +G+ N++V +SL+ + G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK-------------- 115
A ++F+ + + N+V++S L+ + G EKA E++ M+
Sbjct: 317 REARQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKAC 372
Query: 116 -----------------LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVV 158
G V + L+ + K +++A R+ + I +++
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM---SIRNMI 429
Query: 159 TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRI 218
T+N +LS L G+ EA + + M+ KG+ P +S+ I+ G +D+ + +
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 219 LKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
K G+KP Y+ +ID + G FE A + E+ N
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 12/237 (5%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++TS++ V V+AL + EMV+ G+ N +S +K LG++ +
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ G N S L A +++ M +P V +L F K ++
Sbjct: 190 ITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP----EPDVICWTAVLSAFSKNDLY 245
Query: 140 ENAYRLLDEAVEHG---IASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
E A L A+ G + T+ +L+ L ++ + + K+++ G+ ++V +
Sbjct: 246 EEALGLF-YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ + + G + +A V N + KK N+++++ L+ G+ + G+ E+A +F +M
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREM 357
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P T + C G + A + ++ I + ++ C + ++ A
Sbjct: 334 LPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKA 393
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
L +++ G AP F++++ SK G +++A E+ M+ G++P V+ ++ G+
Sbjct: 394 LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 453
Query: 135 KQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
K M++ EA +L + K S V+
Sbjct: 454 KGGMMD----------------------------------EAQEILAEAKKKHKKLSPVT 479
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF-FKKGDFERAFGVFEQM 253
Y+ +I G+C+ D+A ++N + + G++PNA Y LI F K D+E+A +FE+M
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 12/259 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + G+ P+ TY + ++ + A + ++M+ SGV +++
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 62 GHCLLGDINSALKLFD--EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFE----LYNRMK 115
C G A +++ + E + P V + C + G++ A E L +
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKND-GTITFAQEMLGDLSGEAR 368
Query: 116 LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVV 174
GI+P ++ L + +++A LL + + G A +N+++ G +
Sbjct: 369 RRGIKPFSDVIHSLCR----MRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 175 EACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
EA +L M S+G+ P + +Y II G+ + G MD+A ++ KK K + +TY LI
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 235 DGFFKKGDFERAFGVFEQM 253
G+ K +++ A + +M
Sbjct: 485 RGYCKIEEYDEALKLLNEM 503
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A ++LK M + G P TYT +I + G + EA + E ++ + +L++
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIR 485
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSS-KIGSMEKAFELYNRMKLMGIQ 120
G+C + + + ALKL +E+ GV PNA ++ LI K EKA L+ MK G+
Sbjct: 486 GYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLH 545
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A LL +M + G P + V+ C + G++ EA + M + G+ ++ T ++
Sbjct: 391 AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS 450
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G+ G ++ A ++ E + + VT+ LI KI ++A +L N M G+QP
Sbjct: 451 GYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQP 510
Query: 122 TV-----FIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
I F LK E A L +E + G+
Sbjct: 511 NADEYNKLIQSFCLKALD----WEKAEVLFEEMKQKGL 544
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLD------EAVEHGIASVVTYNILLSWLCGLGK 172
I T +V+ LL +AY L D E G+ ++ N L++ LGK
Sbjct: 187 ITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGK 246
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
A ++ K G TP+ +Y + C++ MD A SV ++LK G+
Sbjct: 247 SKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGN 306
Query: 233 LIDGFFKKGDFERAFGVFE 251
+I F K+G E A+ V+E
Sbjct: 307 IITWFCKEGKAEEAYSVYE 325
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+LL+E L + P+ G Y +I + +A L EM+N G VN V T+L+ +
Sbjct: 138 ELLREQ--LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 195
Query: 64 CLLGDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
G ++A L + + + P+ T+S+LI ++ + +K +L + M+ GI+P
Sbjct: 196 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPN 255
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAV--EHGIASVVTYNILLSWLCGLGKVVEACNLL 180
L+ + K M L + + + T N L G G++ N
Sbjct: 256 TITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY 315
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+K S G+ P++ ++N ++ + + G +VM + K +TY +ID F +
Sbjct: 316 EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRA 375
Query: 241 GDFERAFGVFEQMMA 255
GD ++ +F M +
Sbjct: 376 GDLKQMEYLFRLMQS 390
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 86 PNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF----QKQNMLEN 141
P+ +S LI K G A L++ MK G +P + L+ K LE
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 142 AYRLLDE--AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
LD+ +E +VVTYNILL GKV + L + V+P + ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
+ + G + + +V+ R+ KP+ +T+ LID + KK +FE+ F+ +M +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 260 LQITQFTPL 268
+ F +
Sbjct: 311 PTLPTFNSM 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 4 KLLKEMRALGW-IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
++ + M+ W IP G Y+ +I ++G A+ L EM NSG + V +L+
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 63 HCLLGDINSALKLFDEIVE--AGV---APNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
H D AL+ ++ G+ PN VT+++L+ ++ G +++ L+ + +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEA 176
+ P V+ ++ + K M++ +L + ++T+N+L+ + +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDG 236
+M P+L ++N +I+ + + +D A V ++ P+ +TY +I
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM 357
Query: 237 FFKKGDFERAFGVFEQMMAANANLQIT 263
+ G RA +FE++ ++ L+ +
Sbjct: 358 YGYCGSVSRAREIFEEVGESDRVLKAS 384
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 3/243 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P EGTY ++ + G A +L DEM+ G+ + + T+L+ + I+ A +
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 76 FDEIVE-AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
D++ P+ T+S L+ + LY M I P +L G+
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 135 KQNMLENAYRLLDEAVEHGI--ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
+ + ++L + + V T NI+LS +GK+ + +K + G+ P
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
++N +I + +K D SVM + K TY +I+ F GD + F+Q
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQ 361
Query: 253 MMA 255
M +
Sbjct: 362 MRS 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 97/239 (40%), Gaps = 9/239 (3%)
Query: 16 PSEGTYTSVIGTCV--RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
P TY++++ CV Q ++V++L EM + N + ++ G+ +G +
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLY--KEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250
Query: 74 K-LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
K L D +V P+ T ++++ +G ++ Y + + GI+P L+
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ K+ M + +++ + + TYN ++ +G D+M S+G+
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF---ERAF 247
++ +I G+ G S + K + N Y +I K D ER +
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVY 429
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 26/234 (11%)
Query: 23 SVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI-VE 81
S I R GN+ EA + +M N +I+ +++ + G ++ A ++FDE+ V
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQVFDEMPVR 110
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLKGFQKQNML 139
+ NA+ + +I +G KA+EL+ + P V + ++ GF +
Sbjct: 111 VTTSYNAM-ITAMIKNKCDLG---KAYELFCDI------PEKNAVSYATMITGFVRAGRF 160
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
+ A L E SV + N+LLS GK EA + M K V VS + ++
Sbjct: 161 DEAEFLYAETPVKFRDSVAS-NVLLSGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMV 215
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G+C+ G + DA S+ +R+ ++ N +T+T +IDG+FK G FE FG+F +M
Sbjct: 216 HGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVA-TSLMKGHCLLGDINSALKLFDEIVEAGVAPN 87
+R G EA+R V G+ V +V+ +S++ G+C +G I A LFD + E N
Sbjct: 188 LRAGKWNEAVR-----VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----N 238
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMG---IQPTVFIVKFLLKGFQKQNMLENAYR 144
+T++ +ID K G E F L+ RM+ G + V F + R
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF--------KACRDFVR 290
Query: 145 LLDEAVEHGIASVVTY-------NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ + HG+ S + N L+S LG + EA + M +K VS+N
Sbjct: 291 YREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS----VSWNS 346
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I G ++ + +AY + ++ K + +++T +I GF KG+ + +F MM
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELF-GMMPEK 401
Query: 258 ANLQIT 263
N+ T
Sbjct: 402 DNITWT 407
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++ S+I V++ + EA L ++M +++ T ++KG G+I+ ++LF +
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E + +T++ +I G E+A +++M + P + +L L
Sbjct: 399 PE----KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 140 ENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
++ V+ I + ++ N L+S C G +A K+ S P++VSYN +
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY----KIFSCISEPNIVSYNTM 510
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
I G+ G A + + + G +PN +T+ L+ G + + F+ M ++
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 26/240 (10%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+T VI ++ G++ EA L D + + N++ T+++ G+ ++ A LF E+
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLKGFQKQN 137
E N V+++ +ID ++ G ++KA EL++ M P IV + ++K ++
Sbjct: 136 PER----NVVSWNTMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVKALVQRG 185
Query: 138 MLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
++ A L + VV++ ++ L GKV EA L D M + + +S+N
Sbjct: 186 RIDEAMNLFERMPRR---DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNA 238
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I G+ + +D+A + + ++ ++ +I GF + + +A G+F++M N
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKN 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 114/237 (48%), Gaps = 27/237 (11%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+T+++ +R + A L EM N++ +++ G+ G I+ AL+LFDE+
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLKGFQKQN 137
E N V+++ ++ + G +++A L+ RM P +V + ++ G K
Sbjct: 167 PER----NIVSWNSMVKALVQRGRIDEAMNLFERM------PRRDVVSWTAMVDGLAKNG 216
Query: 138 MLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
++ A RL D E I +++N +++ ++ EA L M + S+N
Sbjct: 217 KVDEARRLFDCMPERNI---ISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNT 269
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+I G R M+ A + +R+ +K N +++T +I G+ + + E A VF +M+
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKML 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 31/248 (12%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVP-VNIIVATSLMKGHCLLGDINSALKLFDEIVEA 82
+IG + G + EA +L D G+P +++ T ++ G+ LGD+ A +LFD +
Sbjct: 52 LIGELCKVGKIAEARKLFD-----GLPERDVVTWTHVITGYIKLGDMREARELFDRV--- 103
Query: 83 GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLKGFQKQNMLE 140
N VT++ ++ + + A L+ M P +V + ++ G+ + ++
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGYAQSGRID 157
Query: 141 NAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIIL 200
A L DE E I V++N ++ L G++ EA NL ++M + V VS+ ++
Sbjct: 158 KALELFDEMPERNI---VSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVD 210
Query: 201 GHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMA---AN 257
G + G +D+A + + + ++ N +++ +I G+ + + A +F+ M A+
Sbjct: 211 GLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 258 ANLQITQF 265
N IT F
Sbjct: 267 WNTMITGF 274
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +MR G P+ T ++ + G V E + + +G+ ++ I+ TSL+
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLN 317
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL----- 116
+C +G I A +FD + E V VT++++I + G +E A + M+L
Sbjct: 318 FYCKVGLIEYAEMVFDRMFEKDV----VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 117 ------------------------------MGIQPTVFIVKFLLKGFQKQNMLENAYRLL 146
+ + + ++ + K + +A ++
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 147 DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
D VE + + +N LL+ G EA L M +GV P+++++N IIL R G
Sbjct: 434 DSTVEKDL---ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+D+A + ++ G+ PN +++T +++G + G E A +M +
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 42/212 (19%)
Query: 24 VIGTCVRQGNVVEALRLKDEM----VNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ T + E L+L E+ + +I++A+++M + G I A K+FD
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
VE + + ++ L+ ++ G +A L+ M+L G+ P
Sbjct: 437 VE----KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP------------------ 474
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
+V+T+N+++ L G+V EA ++ +M S G+ P+L+S+ ++
Sbjct: 475 ----------------NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 200 LGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
G + GC ++A + ++ + GL+PNA + T
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 44 MVNSGVPVNIIVATSL--MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKI 101
+V SG+ + VA+SL M G C G ++ A K+FDEI + NAV ++ L+ +
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKC--GVLDDASKVFDEIPDR----NAVAWNALMVGYVQN 252
Query: 102 GSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTY 160
G E+A L++ M+ G++PT V L +E + A+ +G+ +
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
LL++ C +G + A + D+M K V V++N II G+ ++G ++DA + +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDV----VTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 221 KGLKPNALTYTPLIDG 236
+ LK + +T L+
Sbjct: 369 EKLKYDCVTLATLMSA 384
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L M+ G P+ T+ +I + +R G V EA + +M +SG+ N+I T++M
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G G A+ ++ E+G+ PNA + +V + + + S+ ++ + + +Q
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI-IRNLQH 578
Query: 122 T--VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
+ V I L+ + K + A ++ + + + N ++S G + EA L
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKL---YSELPLSNAMISAYALYGNLKEAIAL 635
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL-KKGLKPNALTYTPLIDGFF 238
+ G+ P ++ +++ G ++ A + I+ K+ +KP Y ++D
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 239 KKGDFERAFGVFEQM 253
G+ E+A + E+M
Sbjct: 696 SAGETEKALRLIEEM 710
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
+ +++ G EALRL M GVP N+I ++ G ++ A +F ++
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
+G+ PN ++++ +++ + G E+A +M+ G++P F + L L
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 141 NAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEAC---NLLDKMMSKGVTPSLVSYNH 197
+ + I + ++ L+S L + C N +K+ + L N
Sbjct: 564 -----IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA 618
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I + G + +A ++ + GLKP+ +T T ++ GD +A +F +++
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKR 678
Query: 258 A 258
+
Sbjct: 679 S 679
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALR-LKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
S + ++ + T + N +E+ R L DE +P +++ G+ G A+ L
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS----WNAMISGYTQNGLTEDAISL 407
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
F E+ ++ +PN VT + ++ +++G++ +++ ++ + ++++ L+ + K
Sbjct: 408 FREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 136 QNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+ A RL D + + VT+N ++S G+ EA N+ +M++ G+TP+ V++
Sbjct: 468 CGSIAEARRLFDLMTK---KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 524
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ G + + + N ++ + G +P+ Y ++D + G +RA E M
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ T+ I + V EAL EM G +I T++++ +C + ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
E+ G PN++T++ ++ + E+A + RMK G +P L+ +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 136 QNMLENAYRLLD-EAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV-TPSL 192
LE A R+ E E G++ + TYN +++ C + +A LL +M S + P +
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNR-ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+Y ++ ++G + + ++ + K L + TYT LI + E A+ +FE
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 252 QMMAAN 257
+M++ +
Sbjct: 462 EMISQD 467
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 51 VNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL 110
V + +M+ G+ A+ +FD + E G+ N + ++L+D K +E+A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 111 YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCG 169
++K I P + G+ K N +E A + E HG V++Y ++ C
Sbjct: 213 LLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 170 LGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
+ ++ +L +M + G P+ ++Y I+ + ++A V R+ + G KP++L
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 230 YTPLIDGFFKKGDFERAFGVFEQMM 254
Y LI + G E A VF M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEM 356
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 4/245 (1%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
++EM+ G+ P +YT++I +Q ++ + EM +G P N I T++M
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN-RMKLMGIQPTVF 124
+ AL++ + +G P+++ ++ LI ++ G +E+A ++ M +G+
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLGKVVEACNLLDK 182
++ + + + A LL E + + V TY LL G VVE LL +
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 183 MMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M++K ++ +Y +I CR + AY + ++ + + P T L++ KK
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Query: 242 DFERA 246
E A
Sbjct: 487 MHESA 491
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
V Q VV L+LK + + NI + G C + AL E+ G P
Sbjct: 206 VEQARVV-LLQLKSHITPNAHTFNIFI-----HGWCKANRVEEALWTIQEMKGHGFRPCV 259
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
++++ +I C + K +E+ + M+ G P ++ Q E A R+
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRKG 206
G + YN L+ L G++ EA + M + GV+ + +YN +I +C
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 207 CMDDAYSVMNRILKKGL-KPNALTYTPLIDGFFKKGD 242
D A ++ + L P+ TY PL+ FK+GD
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L EM A G P+ TYT+++ + Q EALR+ M SG + + L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 64 CLLGDINSALKLFD-EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI-QP 121
G + A ++F E+ E GV+ N T++ +I +KA EL M+ + P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 122 TVFIVKFLLKG-FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
V + LL+ F++ +++E L + +H ++ TY L+ LC A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 180 LDKMMSKGVTP 190
++M+S+ +TP
Sbjct: 460 FEEMISQDITP 470
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 63 HCLLGDINSALKLFDEIVEA--GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H D SAL + + E+ G ++ + + +D K ++ E RM+ +
Sbjct: 95 HRFRDDWRSALGIL-KWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL- 152
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
T+ V +++ F E A + D E G+ + + N+LL LC +V +A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L ++ S +TP+ ++N I G C+ +++A + + G +P ++YT +I + +
Sbjct: 213 LLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 240 KGDFERAFGVFEQMMA 255
+ +F + + + +M A
Sbjct: 272 QFEFIKVYEMLSEMEA 287
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ T+ I + V EAL EM G +I T++++ +C + ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
E+ G PN++T++ ++ + E+A + RMK G +P L+ +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 136 QNMLENAYRLLD-EAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV-TPSL 192
LE A R+ E E G++ + TYN +++ C + +A LL +M S + P +
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNR-ILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+Y ++ ++G + + ++ + K L + TYT LI + E A+ +FE
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 252 QMMAAN 257
+M++ +
Sbjct: 462 EMISQD 467
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 51 VNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFEL 110
V + +M+ G+ A+ +FD + E G+ N + ++L+D K +E+A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 111 YNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCG 169
++K I P + G+ K N +E A + E HG V++Y ++ C
Sbjct: 213 LLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 170 LGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALT 229
+ ++ +L +M + G P+ ++Y I+ + ++A V R+ + G KP++L
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 230 YTPLIDGFFKKGDFERAFGVFEQMM 254
Y LI + G E A VF M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEM 356
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 4/245 (1%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
++EM+ G+ P +YT++I +Q ++ + EM +G P N I T++M
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN-RMKLMGIQPTVF 124
+ AL++ + +G P+++ ++ LI ++ G +E+A ++ M +G+
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS--VVTYNILLSWLCGLGKVVEACNLLDK 182
++ + + + A LL E + + V TY LL G VVE LL +
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 183 MMSK-GVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
M++K ++ +Y +I CR + AY + ++ + + P T L++ KK
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Query: 242 DFERA 246
E A
Sbjct: 487 MHESA 491
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
V Q VV L+LK + + NI + G C + AL E+ G P
Sbjct: 206 VEQARVV-LLQLKSHITPNAHTFNIFI-----HGWCKANRVEEALWTIQEMKGHGFRPCV 259
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
++++ +I C + K +E+ + M+ G P ++ Q E A R+
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRKG 206
G + YN L+ L G++ EA + M + GV+ + +YN +I +C
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 207 CMDDAYSVMNRILKKGL-KPNALTYTPLIDGFFKKGD 242
D A ++ + L P+ TY PL+ FK+GD
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L EM A G P+ TYT+++ + Q EALR+ M SG + + L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 64 CLLGDINSALKLFD-EIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI-QP 121
G + A ++F E+ E GV+ N T++ +I +KA EL M+ + P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 122 TVFIVKFLLKG-FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
V + LL+ F++ +++E L + +H ++ TY L+ LC A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 180 LDKMMSKGVTP 190
++M+S+ +TP
Sbjct: 460 FEEMISQDITP 470
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 63 HCLLGDINSALKLFDEIVEA--GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
H D SAL + + E+ G ++ + + +D K ++ E RM+ +
Sbjct: 95 HRFRDDWRSALGIL-KWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL- 152
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
T+ V +++ F E A + D E G+ + + N+LL LC +V +A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
L ++ S +TP+ ++N I G C+ +++A + + G +P ++YT +I + +
Sbjct: 213 LLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 240 KGDFERAFGVFEQMMA 255
+ +F + + + +M A
Sbjct: 272 QFEFIKVYEMLSEMEA 287
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
N+++ ++ +GH L D SALKL+ ++ G+ PN+ TF ++ +K + ++ +++
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLG 171
+ +G +++ L+ + + LE+A+++ D++ VV+Y L+ G
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR---DVVSYTALIKGYASRG 214
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
+ A L D++ K V VS+N +I G+ G +A + ++K ++P+ T
Sbjct: 215 YIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 232 PLIDGFFKKGDFE 244
++ + G E
Sbjct: 271 TVVSACAQSGSIE 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 11/238 (4%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVA-TSLMKGHCLLGDINSALKLFDE 78
+YT++I +G + A +L DE +PV +V+ +++ G+ G+ AL+LF +
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDE-----IPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
+++ V P+ T ++ ++ GS+E +++ + G + IV L+ + K
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 139 LENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
LE A L + V+++N L+ + EA L +M+ G TP+ V+ I
Sbjct: 317 LETACGLFERL---PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 199 ILGHCRKGCMDDAYSVMNRILK--KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ G +D + I K KG+ + T LID + K GD E A VF ++
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 42/252 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M +LG +P+ T+ V+ +C + E ++ ++ G +++ V TSL+
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + A K+FD+ V V+++ LI
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDV----VSYTALI-------------------------- 207
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
KG+ + +ENA +L DE + VV++N ++S G EA L
Sbjct: 208 ---------KGYASRGYIENAQKLFDEI---PVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
MM V P + ++ + G ++ V I G N LID + K G
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 242 DFERAFGVFEQM 253
+ E A G+FE++
Sbjct: 316 ELETACGLFERL 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
++ A +K + N+ ++ ++ ++ H + A+ +F I E PN + ++
Sbjct: 51 IIHAQMIKIGLHNTNYALSKLIEFCILSPH--FEGLPYAISVFKTIQE----PNLLIWNT 104
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
+ + A +LY M +G+ P + F+LK K + ++ ++ G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 154 IA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
+ + L+S G++ +A + DK + V VSY +I G+ +G +++A
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV----VSYTALIKGYASRGYIENAQ 220
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+ + I K + +++ +I G+ + G+++ A +F+ MM N
Sbjct: 221 KLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 11/254 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A KL M + G PSE T V+ C + E +L ++ G ++ T+L+
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + A K FD + E VA ++ LI + E+A LY RMK GI P
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVA----LWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+ +LK LE ++ ++HG V LS + +E NL+
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 182 KMMSKGVTPS--LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ TP+ +VS+N +I G G D+A + +L +G++P+ +T+ +I
Sbjct: 482 RR-----TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 240 KGDFERAFGVFEQM 253
KG ER + F M
Sbjct: 537 KGFVERGWFYFNMM 550
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 12/217 (5%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P T+ S++ C + L + +++ +G + +++SL+ + G + A K
Sbjct: 43 LPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARK 102
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+F+E+ E V V ++ +I C S+ G + +A L N M+ GI+P + +L G
Sbjct: 103 VFEEMRERDV----VHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVL 158
Query: 135 KQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLV 193
+ L+ L D AV +G + N +L+ C V +A +L D+M + +V
Sbjct: 159 EITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMV 211
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
S+N +I G+ G M + ++ R+ GL+P+ T+
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 33 NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFS 92
+V +A L D+M +++ +++ G+ +G+++ LKL + G+ P+ TF
Sbjct: 194 HVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 93 VLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEH 152
+ S + +E L+ ++ G + + L+ + K E +YR+L+
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN- 308
Query: 153 GIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAY 212
VV + +++S L LG+ +A + +M+ G S + ++ + G D
Sbjct: 309 --KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 213 SVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
SV +L+ G + LI + K G +++ +FE+M
Sbjct: 367 SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDC---SSKIGSMEKAF-ELYNRMKLMGIQP 121
+G +A K+FDE+ E A++F+ L++ S K +E F EL ++ I+P
Sbjct: 119 VGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL---SIEP 175
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
V L+KG + A L+DE G+ +T+NILL GK E +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKK 240
+M+ K V + SYN +LG + ++ S+ +++ LKP+ T+T +I GF +
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 241 GDFERAFGVFEQM 253
G + A ++++
Sbjct: 296 GKLDEAITWYKEI 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 37/256 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCV--RQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
A K+ EM + ++ +++ CV ++ ++VE + K+ + ++ +L
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGI-FKELPGKLSIEPDVASYNTL 183
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+KG C G A+ L DEI G+ P+ +TF++L+ S G E+ +++ RM
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM----- 238
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
+++ V+ I S YN L L K E +L
Sbjct: 239 --------------------------VEKNVKRDIRS---YNARLLGLAMENKSEEMVSL 269
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
DK+ + P + ++ +I G +G +D+A + I K G +P + L+ K
Sbjct: 270 FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICK 329
Query: 240 KGDFERAFGVFEQMMA 255
GD E A+ + +++ A
Sbjct: 330 AGDLESAYELCKEIFA 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG---FQKQNMLENAYRLLDE-- 148
+I+ ++G E A ++++ M + T LL +K +++E ++ L
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 149 AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
++E +AS YN L+ LCG G EA L+D++ +KG+ P +++N ++ KG
Sbjct: 172 SIEPDVAS---YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
++ + R+++K +K + +Y + G + E +F+++ + FT +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG 102
EM G+ N + T+L++G GD + A ++F E+V GV P+ +T+++L+D K G
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 103 SMEKA---------FELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG 153
+EKA ++L+ + L G++P V ++ GF K+ E AY L + E G
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 154 -IASVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
+ TYN L+ G + L+ +M S
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 43/179 (24%)
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++LF E+ + G+ N VT++ LI + G + A E++ M G+ P
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP----------- 49
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCG---------LGKVVEACNLLDKM 183
++TYNILL LC GKV + +L +
Sbjct: 50 -----------------------DIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSL 86
Query: 184 MSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
KGV P++V+Y +I G C+KG ++AY++ ++ + G P++ TY LI + GD
Sbjct: 87 SLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
+L +EM G + + TYT++I + G+ A + EMV+ GVP +I+ L+ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 64 CLLGDINSAL---------KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
C G + AL LF + GV PN VT++ +I K G E+A+ L+ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 115 KLMGIQP 121
K G P
Sbjct: 122 KEDGPLP 128
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 48/299 (16%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTC-----VRQGNVVEALRLKDEMVNSGVPVNIIVATS 58
KL M G + T +V TC + QG V A +K SG +++ V++
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK-----SGYDLDLWVSSG 557
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ + GD+++A FD I P+ V ++ +I + G E+AF ++++M+LMG
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIP----VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 119 IQPTVFIVKFLLKGF-------QKQNMLENAYRL---------------------LDEAV 150
+ P F + L K Q + + NA +L +D+A
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 151 ----EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
+ ++ +N +L L G+ E L +M S G+ P V++ ++ G
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 207 CMDDAYSVMNRIL-KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM-MAANANLQIT 263
+ +AY M + G+KP Y+ L D + G ++A + E M M A+A++ T
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P+ T+TS++ C +V+ L +++ G N++V TS++ + GD+ SA ++
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FD + +AV ++ +I S K +E + M + G+ PT F +L G K
Sbjct: 257 FDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 136 QNMLENAYRL--LDEA---VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP 190
+Y L L A V +A + N LL C G + EA + ++ + P
Sbjct: 313 L----GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN----P 364
Query: 191 SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL-KPNALTYTPLIDG 236
+LVS+N II G G + A + R+L+ +P+ T++ I
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 23/246 (9%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P E T+++ I V L ++ G ++ V T+L+ + + SA K+
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FD + E V V ++ +I S++G+ E A + + M + F + ++
Sbjct: 460 FDVMKERDV----VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 136 QNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGL--------GKVVEACNLLDKMMSKG 187
ML V H +A ++ ++S +CG GK A + + S
Sbjct: 516 MAMLRQG------EVFHCLAIRTGFDCVMS-VCGALVDMYGKNGKYETA----ETIFSLA 564
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
P L +N ++ + + G ++ A S +IL+ G P+A+TY L+ +G +
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Query: 248 GVFEQM 253
++ QM
Sbjct: 625 FLWNQM 630
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 4 KLLKEMRALGWIPSEG-TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
K K M + G + + TY ++I AL++KD+M + GV N +SL+
Sbjct: 359 KEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISA 418
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
G + A LF+E++ +G PN+ F++L+ + ++AF L+ K + +
Sbjct: 419 CANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNES 478
Query: 123 VFIVKFLLKGFQKQ-NMLENA--------------------------------------- 142
++ + KG N+L+N
Sbjct: 479 LYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT 538
Query: 143 --YR---LLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
YR L+DE G++ + +T++ L+ G G V A +L M S G P +V+Y
Sbjct: 539 DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYT 598
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG---DFERAFGVFEQM 253
I C+ A+S+ + + +KPN +TY L+ K G + + +++ M
Sbjct: 599 TAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDM 658
Query: 254 MAA 256
A
Sbjct: 659 RNA 661
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/213 (17%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
N+ + +++ L GD + +++++++ + PN + L++ +S + ++Y
Sbjct: 266 NMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNSH--DLGYTLKVY 323
Query: 112 NRMKLMGIQPTVFIVKFLLKG---FQKQNMLENAYRLLDEAVEHGIASV--VTYNILLSW 166
M+++ + + LLK + ++ ++ Y+ G+ + TY ++
Sbjct: 324 KNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKV 383
Query: 167 LCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
A + D M S GVTP+ +++ +I G ++ A + +L G +PN
Sbjct: 384 FADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPN 443
Query: 227 ALTYTPLIDGFFKKGDFERAFGVFEQMMAANAN 259
+ + L+ + ++RAF +F+ ++ N
Sbjct: 444 SQCFNILLHACVEACQYDRAFRLFQSWKGSSVN 476
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
++++ S+ G+ + AL LF E+ + P+ TF+ ++ + + S++ E +
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLG 171
++ G++ +I LL + K E+A++ D A VV +N ++S G
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR---DVVCWNSVISSYANHG 635
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYT 231
+ +A +L+KMMS+G+ P+ +++ ++ G ++D +L+ G++P Y
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV 695
Query: 232 PLIDGFFKKGDFERAFGVFEQM 253
++ + G +A + E+M
Sbjct: 696 CMVSLLGRAGRLNKARELIEKM 717
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 16 PSEGTYTSVIGTCVR---QGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
P+E +S I C +G + +L+ +V SG ++ V T L+ + G+I+ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWM-VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+FD + E + VT++ +I K+G + +L+ ++ + P +I+ +L
Sbjct: 203 RLVFDALPE----KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 133 FQKQNMLENAYRLLDEAVEHGI---ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT 189
LE ++ + +G+ AS++ N+L+ G+V+ A L + M +K +
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLM--NVLIDSYVKCGRVIAAHKLFNGMPNKNI- 315
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
+S+ ++ G+ + +A + + K GLKP+
Sbjct: 316 ---ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 44/284 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEM----VNSGVPVNIIVAT 57
A +L +M LG +P+ ++SV+ C + +E+L + +++ + G + V
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKK----IESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 58 SLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
+L+ + LG++ SA +F + + +AVT++ LI+ S+ G EKA EL+ RM L
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 118 GIQP----------------TVFIVKFLLK-----GFQKQNMLENAY-----------RL 145
G++P T+F + L GF N +E A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 146 LDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
LD +E + +VV +N++L L + + + +M + + P+ +Y I+ R
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGV 249
G ++ + ++I+K + NA + LID + K G + A+ +
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 74 KLFDEIVEAGVAPNAVTFSVLID-CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
K D + G+ PN T L++ C GS+++ +L++++ +G+ + + L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
+ + L A+++ DE E ++ T+N ++ L + E L +M+S+ VTP+
Sbjct: 130 YLFKGDLYGAFKVFDEMPER---TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 193 VSYNHIILGHCRKGCM--DDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF 250
+++ + L CR G + D + RIL +GL+ + + PLID + + G + A VF
Sbjct: 187 GTFSGV-LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 251 E 251
+
Sbjct: 246 D 246
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 23/243 (9%)
Query: 16 PSEGTYTSVIGTCVRQG----NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINS 71
P+EGT++ V+ C R G +VVE + + ++ G+ + +V L+ + G ++
Sbjct: 184 PNEGTFSGVLEAC-RGGSVAFDVVEQIHAR--ILYQGLRDSTVVCNPLIDLYSRNGFVDL 240
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
A ++FD + + ++ +I SK +A L+ M ++GI PT + +L
Sbjct: 241 ARRVFDGLR----LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 132 GFQKQNMLENAYRLLDEAVEHGIASVVTY--NILLSWLCGLGKVVEACNLLDKMMSKGVT 189
+K LE +L ++ G +S TY N L+S LG ++ A ++ M +
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSS-DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA- 354
Query: 190 PSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI-----DGFFKKGDFE 244
V+YN +I G + G + A + R+ GL+P++ T L+ DG +G
Sbjct: 355 ---VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 245 RAF 247
A+
Sbjct: 412 HAY 414
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 44/251 (17%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ ++M+ +P++ TY S++ TC+R
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIR--------------------------------- 502
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
LGD+ ++ +I++ NA SVLID +K+G ++ A+++ R V
Sbjct: 503 --LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA----GKDV 556
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDK 182
++ G+ + N + A + ++ GI S V +S GL + E + +
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
G + L N ++ + R G ++++Y ++ + + + L+ GF + G+
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLA----FEQTEAGDNIAWNALVSGFQQSGN 672
Query: 243 FERAFGVFEQM 253
E A VF +M
Sbjct: 673 NEEALRVFVRM 683
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
T LMK G + AL F + E P+ ++ +I+ ++G+ +KA L ++M+L
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 117 MGIQ--PTVFIVKFLLKGFQKQNM-----------LENAYRLLDEAVEHG-IASVVTYNI 162
G + P + L+ + + M + A R+ E + G + VVTYN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG 222
L+ C ++ A L + M +KG P+ V+YN I + ++ A +M + K G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 223 LK-PNALTYTPLI 234
P + TYTPLI
Sbjct: 349 HGVPGSSTYTPLI 361
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGV--PVNIIVATSLMKGHCLLG------ 67
P Y ++I R GN +A L D+M G P + T L+ +C G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 68 -----DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ A ++F E++ G P+ VT++ LID K + +A EL+ MK G P
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLD--EAVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
++ + N +E A ++ + + HG+ TY L+ L + EA +L+
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 181 DKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLK 224
+M+ G+ P +Y + +G +++ +++G++
Sbjct: 378 VEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 21/226 (9%)
Query: 64 CLLGDINSALKLFDEIVEAGVAPN------AVTFSVLIDCSSKIGSMEKAFELYNRMKLM 117
CLL N L+D + + N + + L+ C + G +++A + RMK
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 118 GIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI---ASVVTYNILLSWLCGLG--- 171
+P V+ ++ + + A LLD+ G TY IL+S C G
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 172 --------KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
++ EA + +M+ +G P +V+YN +I G C+ + A + + KG
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 224 KPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQ-ITQFTPL 268
PN +TY I + + E A + M + + +TPL
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPL 360
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 119/254 (46%), Gaps = 14/254 (5%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
PS TY + V+ G + +A L EM++ G + V +L++G+ LGD + A++
Sbjct: 250 PSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEF 309
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM--KLMGIQPTVFIVKFLLKGF 133
FDE+ + + + ++ + G+ ++A E Y + K + P V LL+ F
Sbjct: 310 FDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNV--LLEVF 367
Query: 134 QKQNMLENAYRLLDEAVE-HGIASVVTYN-----ILLSWLCGLGKVVEACNLLDKMMSKG 187
K + A+ L +E ++ H ++++ N I+++ +G+ EA N K+ SK
Sbjct: 368 LKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKV 427
Query: 188 VTPSLV----SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDF 243
+ V Y +I+ C +G + +A + + L +A ++ +ID + K
Sbjct: 428 TSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERI 487
Query: 244 ERAFGVFEQMMAAN 257
+ A + ++M+ N
Sbjct: 488 DDAVKMLDRMVDVN 501
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 100 KIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG--IASV 157
+ ++ A +L + +PTVF ++ + + L + + +V
Sbjct: 157 RASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNV 216
Query: 158 VTYNILLSWLCGLGKVVEACNLLDKMMSKG-VTPSLVSYNHIILGHCRKGCMDDAYSVMN 216
V+YN +++ C G V EA + +++ PS V+Y H+ G + G + DA S++
Sbjct: 217 VSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLR 276
Query: 217 RILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+L KG ++ Y LI G+ GDF++A F+++
Sbjct: 277 EMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 313
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 25 IGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV-EAG 83
+ + +R ++ A +L + V S + +++ + ++ LF ++
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTVFIVKFLLKGFQKQNMLENA 142
+ PN V+++ +I+ G++++A E+Y + P+ + L KG + + +A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 143 YRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
LL E + G A+ T YN L+ LG +A D++ SK + +
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
KG +A +L K + + T L++ F K G + A+ +F +M+ +A
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHA 388
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 16/250 (6%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSLMKGHCLLGDINSALK 74
P+ T ++I R E++ L S + N++ ++ HC G+++ AL+
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 75 LFDEIV-EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
++ I+ A AP++VT+ L + G + A L M G + L++G+
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 134 QKQNMLENAYRLLDE-----AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
+ A DE V GI + + + G EA ++ K
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNAT----FMEYWFEKGNDKEAMESYRSLLDKKF 353
Query: 189 TPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP-----LIDGFFKKGDF 243
+ N ++ + G D+A+++ N +L PN L+ +++ FK G+F
Sbjct: 354 RMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEF 413
Query: 244 ERAFGVFEQM 253
A F+++
Sbjct: 414 SEAINTFKKV 423
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 27/274 (9%)
Query: 2 ACKLLKEMRALGWI-PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A K+ MR G + P+E T+ +++ CVR +++ +V SG ++ V+ SLM
Sbjct: 164 ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLM 223
Query: 61 KGHCLLGDINSA------LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
L D +S LKLFDEI + VA S L+ K G KAF+L+ M
Sbjct: 224 S----LYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV----KEGKSHKAFDLFYEM 275
Query: 115 -KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-NILLSWLCGLGK 172
++ G F + LL ++L L A+ G+ ++ N L+ +
Sbjct: 276 NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWD 335
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
+ + +L + MM++ V++ +I + G +D A + + +K N +TY
Sbjct: 336 MKKVESLYEMMMAQDA----VTFTEMITAYMSFGMVDSAVEIFANVTEK----NTITYNA 387
Query: 233 LIDGFFKKGDFERAFGVFEQMMAANANLQITQFT 266
L+ GF + G +A +F M+ +++T F+
Sbjct: 388 LMAGFCRNGHGLKALKLFTDML--QRGVELTDFS 419
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 16 PSEGTYTSVIGTCVRQG--NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
P T+T +I C + G ++V+++ L EM GV + + +++ G+ G
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVL--EMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 270
Query: 74 KLFDEIVEAGVA-PNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ +++E G + P+ T + +I +M K Y+R +LMG+QP + L+
Sbjct: 271 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 330
Query: 133 FQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
F K M + ++D + + + VTYNI++ G++ + ++ KM +GV P+
Sbjct: 331 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
++Y ++ + + G + SV+ +I+ + + + +I+ + + GD ++
Sbjct: 391 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 450
Query: 252 QM 253
QM
Sbjct: 451 QM 452
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 49/308 (15%)
Query: 2 ACKLLKEMRALGWI-PSEGTYTS---VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVAT 57
A K+ +R W P TYT V+G C +Q + +A L + M++ G+ I V T
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNC-KQPD--QASLLFEVMLSEGLKPTIDVYT 183
Query: 58 SLMKGHC---LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
SL+ + LL S L+ + + P+ TF+VLI C K+G + + M
Sbjct: 184 SLISVYGKSELLDKAFSTLEYMKSV--SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 241
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA------------------- 155
+G+ + ++ G+ K M E +L + +E G +
Sbjct: 242 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 156 ------------------SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ T+NIL+ G + C+++D M + + + V+YN
Sbjct: 302 MRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNI 361
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
+I + G ++ V ++ +G+KPN++TY L++ + K G + V Q++ ++
Sbjct: 362 VIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSD 421
Query: 258 ANLQITQF 265
L F
Sbjct: 422 VVLDTPFF 429
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 2/252 (0%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A + + M G +P E TY++++ + G V E L L + V +G + I + L K
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
GD + + E+ V PN V ++ L++ + G A L+N M G+ P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVTYNILLSWLCGLGKVVEACNLL 180
+ L+K + K +A +L +E + + YN LL+ +G EA L
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Query: 181 DKMM-SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ M S P SY ++ + G + A + +LK G++ N + T L+ K
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGK 479
Query: 240 KGDFERAFGVFE 251
+ VF+
Sbjct: 480 AKRIDDVVYVFD 491
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 20 TYTSVIGTCVRQGNVV-EALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
TY+++I TC ++ N+ +A+ + M +G+ + + ++++ + G + L L++
Sbjct: 223 TYSTII-TCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
V G P+A+ FSVL + G + + MK M ++P V + LL+ +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 139 LENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVV-EACNLLDKMMSKGVTPSLVSYNH 197
A L +E +E G+ L + G + +A L ++M +K + YN
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 198 IILGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
++ G ++A + N + + +P+ +YT +++ + G E+A +FE+M+ A
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 257 NANLQI 262
+ +
Sbjct: 462 GVQVNV 467
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Query: 11 ALGWIPSEGTYTSVIGTCVRQGNVVEALR-LKDEMVNSGVPVNIIVATSLMKGHCLLGDI 69
A GW P + SV+G + + +R + EM + V N++V +L++ G
Sbjct: 284 ATGWKPDAIAF-SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKP 342
Query: 70 NSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFL 129
A LF+E++EAG+ PN T + L+ K A +L+ MK + L
Sbjct: 343 GLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTL 402
Query: 130 LKGFQKQNMLENAYRLLDEAVE--HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
L + E A RL ++ E +Y +L+ GK +A L ++M+ G
Sbjct: 403 LNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Query: 188 VTPSLVSYNHII--LGHCRKGCMDDAYSVMNRILKKGLKPN 226
V +++ ++ LG ++ +DD V + +K+G+KP+
Sbjct: 463 VQVNVMGCTCLVQCLGKAKR--IDDVVYVFDLSIKRGVKPD 501
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L EM G P+E T T+++ + +AL+L +EM P++ I+ +L+
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Query: 61 KGHCLLGDINSALKLFDEIVEA-GVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+G A +LF+++ E+ P+ +++ +++ G EKA EL+ M G+
Sbjct: 404 NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI 154
Q V L++ K +++ + D +++ G+
Sbjct: 464 QVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGV 498
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 33 NVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFS 92
+V+ R K + + + A +L + + + L L DEI NA+
Sbjct: 101 SVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALL-- 158
Query: 93 VLIDCSSKIGSMEKAFELYNRMKLMGIQP--TVF---IVKFLLKGFQKQNMLENAYRLLD 147
VL + + +K +N +K + P T+F +K L G Q Q + E A ++
Sbjct: 159 VL----NSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214
Query: 148 EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ VE +TY+ +++ +A ++M G+ P V+Y+ I+ + + G
Sbjct: 215 DGVE---LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQITQFTP 267
+++ S+ R + G KP+A+ ++ L F + GD++ V ++M + + + +
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 268 L 268
L
Sbjct: 332 L 332
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
+P T+ +VI G + +V SG +++VA+SL+ + ++L+
Sbjct: 104 VPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQ 134
+FDE+ E VA +++ +I C + G EKA EL+ RM+ G +P + +
Sbjct: 164 VFDEMPERDVA----SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 219
Query: 135 KQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVE-ACNLLDKMMSKGVTPSLV 193
+ LE + + V+ G N L + G +E A + KM K SLV
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK----SLV 275
Query: 194 SYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
++N +I G+ KG ++NR++ +G +P+ T T ++
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 15/256 (5%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++L M G PS+ T TS++ C R N++ + ++ S V +I V SL+ +
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
G+ N A +F + + VA +++V+I +G+ KA E+Y++M +G++P V
Sbjct: 355 FKCGEANLAETVFSK-TQKDVAE---SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDV 410
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGL----GKVVEACNL 179
+L + LE ++ E + + T +LLS L + G EA +
Sbjct: 411 VTFTSVLPACSQLAALEKGKQIHLSISE---SRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFK 239
+ + K V VS+ +I + G +A + + K GLKP+ +T ++
Sbjct: 468 FNSIPKKDV----VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGH 523
Query: 240 KGDFERAFGVFEQMMA 255
G + F QM +
Sbjct: 524 AGLIDEGLKFFSQMRS 539
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
+S++G + +L++ DEM V V + + G+ AL+LF +
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS----GEAEKALELFGRMES 201
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
+G PN+V+ +V I S++ +E+ E++ + G + ++ L+ + K + LE
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Query: 142 AYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
A + + S+V +N ++ G +L++M+ +G PS + I++
Sbjct: 262 AREVFQKMPR---KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVF---EQMMAANA 258
R + + +++ + + LID +FK G+ A VF ++ +A +
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 259 NLQITQF 265
N+ I+ +
Sbjct: 379 NVMISSY 385
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVR-----QGNVVEALRLK-----DEMVNSGV-- 49
A +L M + G+ P+ + T I C R +G + +K DE VNS +
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVD 251
Query: 50 ------------------PVNIIVA-TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVT 90
P +VA S++KG+ GD S +++ + ++ G P+ T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 91 F-SVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK---QNMLENAYRLL 146
S+L+ CS + F ++ + + +++ L+ + K N+ E +
Sbjct: 312 LTSILMACSRSRNLLHGKF-IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 147 DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
+ V ++N+++S +G +A + D+M+S GV P +V++ ++ +
Sbjct: 371 QKDVAE------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ + I + L+ + L + L+D + K G+ + AF +F +
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++ +I + + GN +A+ + D+MV+ GV +++ TS++ L + ++ I
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E+ + + + S L+D SK G+ ++AF ++N + P
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI------PK----------------- 473
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
VV++ +++S G+ EA D+M G+ P V+ ++
Sbjct: 474 ---------------KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 200 LGHCRKGCMDDAYSVMNRILKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM--MAA 256
G +D+ +++ K G++P Y+ +ID + G A+ + +Q +
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 257 NANLQITQFT 266
NA L T F+
Sbjct: 579 NAELLSTLFS 588
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 21 YTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIV 80
+T++I + G++ A +L EM N + T+L+ G+ G N AL LF +++
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 81 EAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLE 140
GV P TFS + S+ I S+ E++ M ++P ++ L+ + K LE
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 141 NA---YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+ +R+ D+ + V +N ++S L G +A +LD M+ V P+ +
Sbjct: 364 ASERVFRICDDKHD-----CVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 198 IILGHCRKGCMDDAYSVMNRI-LKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
I+ G +++ + ++ G+ P+ Y LID + G F+ E+M
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 22 TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVE 81
T VIG + GN+ EAL E SG+ N L+ + + +++
Sbjct: 149 TMVIGY-AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 82 AGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLEN 141
AG N V +ID +K G ME A ++ M + I I L+ G+ K +E
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEA 263
Query: 142 AYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILG 201
A +L E E + V++ L++ G A +L KM++ GV P +++ +
Sbjct: 264 AEKLFCEMPE---KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 202 HCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFE 251
+ + +++ ++PNA+ + LID + K G E + VF
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 95/217 (43%), Gaps = 8/217 (3%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++T++I VRQG+ AL L +M+ GV +S + + + ++ +
Sbjct: 278 SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ V PNA+ S LID SK GS+E + ++ ++ + ++ + +
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMISALAQHGLG 394
Query: 140 ENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKM-MSKGVTPSLVSYNH 197
A R+LD+ ++ + + T ++L+ G V E + M + G+ P Y
Sbjct: 395 HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC 454
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+I R GC + +M +I + +P+ + ++
Sbjct: 455 LIDLLGRAGCFKE---LMRKIEEMPFEPDKHIWNAIL 488
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 16 PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKL 75
P T+ + +C R ++ + L + ++ SG + IVATSL++ + G + A K+
Sbjct: 105 PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKV 164
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
FDE+ + V+++V+I C S +G +A +Y RM G+ + + LL
Sbjct: 165 FDEM----PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAH 220
Query: 136 QNMLENAYRLLDEAVEHGIASVV-TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
+ L L A + S V N L+ G + A + + M + V ++
Sbjct: 221 VSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV----LT 276
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+N +I+G+ G +A S +++ G++PNA+T+ L+ G +G + FE M
Sbjct: 277 WNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMV-NSGVPVNIIVATSLMKGH 63
+LKEM+ P TY SV+ R G V E L + M + V VNII +++ G
Sbjct: 199 ILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM 258
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
+ L +++E+V+ G+ P+ ++++ +ID + G+++++ L++ MK I+P+V
Sbjct: 259 RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSV 318
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDE 148
++ + L+ +K ++A +L DE
Sbjct: 319 YVYRALIDCLKKSGDFQSALQLSDE 343
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALK 74
I S+ YT+++ R GN+ A L + + + I V +L+ L D+ + +
Sbjct: 67 IISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCR 126
Query: 75 LFDEI-VEAGVAP--------NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
+F E+ + G P A F DC+ +++ E +L+ + +F
Sbjct: 127 VFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIF- 185
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
F + ++ +L E E V+TYN +L L G V E +L M
Sbjct: 186 ------AFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
Query: 185 SK-GVTPSLVSYNHIILGHCRKGC-MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
V+ ++++YN ++ G RK C D + N +++ G++P+ L+YT +ID + G+
Sbjct: 240 EDCSVSVNIITYNTVLNGM-RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGN 298
Query: 243 FERAFGVFEQM 253
+ + +F++M
Sbjct: 299 VKESLRLFDEM 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 1 MACKLLKEMRAL-GWIP-SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS 58
++C++ +E+ L G P S Y ++ + + L E+ S +P +IV
Sbjct: 123 LSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNR 182
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
++ I+ L + E+ E P+ +T++ ++D + G + + + + MK
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE-- 240
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
D +V +++TYN +L+ + +
Sbjct: 241 ----------------------------DCSVS---VNIITYNTVLNGMRKACRFDMCLV 269
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+ ++M+ G+ P L+SY +I R G + ++ + + + ++ ++P+ Y LID
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 239 KKGDFERAFGVFEQM 253
K GDF+ A + +++
Sbjct: 330 KSGDFQSALQLSDEL 344
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
TY +V+ + L + +EMV G+ +++ T+++ G++ +L+LFDE+
Sbjct: 250 TYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEM 309
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMK 115
+ + P+ + LIDC K G + A +L + +K
Sbjct: 310 KQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 6 LKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCL 65
L+++R + P YT V+ V G E + + ++M V +++ T +++G
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFI 125
D A KLFDE++ G+AP+ T++V I+ K +E A ++ + M +G +P V
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 126 VKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+K K L A L E +G+ + T++I++S + +VV A LL++
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
+ V +I C KG MD A ++ ++
Sbjct: 419 NMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 122/264 (46%), Gaps = 22/264 (8%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATS----LMKGHCLLGDIN 70
+PS T +++ VR+ ++L L E++ + + + S L+ C +G+++
Sbjct: 140 VPSAYTLNALLLVLVRKR---QSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVD 196
Query: 71 SALKLFDEIVEAGVAPNAVTFSVLID---------CSSKIGSMEKAFELYNRMKLMGIQP 121
A +L + + V + +S L+ C IG +E +L G++
Sbjct: 197 CATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE---DLRKTRFSPGLRD 253
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
+++FL++G + + ++ ++ + VE +V Y I+L + +A L D
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVE---PDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+++ G+ P + +YN I G C++ ++ A +M+ + K G +PN +TY LI K G
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 242 DFERAFGVFEQMMAANANLQITQF 265
D RA ++++M N F
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTF 394
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDIN--SALKL 75
E T+ +I R G V A L M V V+ + + L+ C D + +
Sbjct: 179 ESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGY 238
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQK 135
+++ + +P ++V++ + G ++ + N+MK ++P + +L+G
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 136 QNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVS 194
A +L DE + G+A V TYN+ ++ LC + A ++ M G P++V+
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 195 YNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
YN +I + G + A ++ + G+ N+ T+ +I + + + A G+ E+
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 255 AAN 257
N
Sbjct: 419 NMN 421
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
+L +M+ P YT V+ + + +A +L DE++ G+ ++ + G C
Sbjct: 273 VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 332
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
DI ALK+ + + G PN VT+++LI K G + +A L+ M+ G+
Sbjct: 333 KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSH 392
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLL 180
++ + + + + A+ LL+EA + ++S LC G + +A LL
Sbjct: 393 TFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 11/255 (4%)
Query: 2 ACKLLKEMRALGWI-PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
A L +EMR G + P TY +I +V + ++ SG I V SL+
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ GD+ SA K+FD++ E + V ++ +I+ ++ G E+A LY M GI+
Sbjct: 164 HLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
P F + LL K L R+ ++ G+ ++ + N+LL G+V EA L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK-KGLKPNALTYTPLIDGFF 238
D+M+ K VS+ +I+G G +A + + +GL P +T+ ++
Sbjct: 280 FDEMVDKNS----VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 239 KKGDFERAFGVFEQM 253
G + F F +M
Sbjct: 336 HCGMVKEGFEYFRRM 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 87 NAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG-IQPTVFIVKFLLKGFQKQNMLENAYRL 145
N ++ LI ++IG+ AF LY M++ G ++P FL+K + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 146 LDEAVEHGIASVV-TYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCR 204
+ G S++ N LL G V A + DKM K LV++N +I G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAE 199
Query: 205 KGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
G ++A ++ + KG+KP+ T L+ K G
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+ SVI G EAL L EM + G+ + SL+ +G + ++ +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM-KLMGIQPTVFIVKFLLKGFQKQNM 138
++ G+ N + +VL+D ++ G +E+A L++ M + T IV + GF K+ +
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 139 LENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNH 197
Y E+ E + +T+ +L G V E +M + + P + +
Sbjct: 309 ELFKYM---ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAAN 257
++ R G + AY + + ++PN + + L+ GD + +A
Sbjct: 366 MVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACTVHGDSD---------LAEF 413
Query: 258 ANLQITQFTP 267
A +QI Q P
Sbjct: 414 ARIQILQLEP 423
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 32 GNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTF 91
G V A ++ +EM N++ T+++ G ++ LKL+ ++ ++ PN TF
Sbjct: 169 GEVENAYKVFEEMPER----NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 92 SVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVE 151
+ L+ + G++ + ++ + MG++ + I L+ + K L++A+R+ D+
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 152 HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSK-GVTPSLVSYNHIILGHCRK-GCMD 209
VV++N +++ G ++A L + MM K G P ++Y +L CR G +
Sbjct: 285 ---KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLG-VLSSCRHAGLVK 340
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ N + + GLKP Y+ L+D + G + A + E M
Sbjct: 341 EGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENM 384
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
KL +MR P++ T+T+++ C G + + + + ++ G+ + ++ SL+ +
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMY 266
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN-RMKLMGIQPT 122
C GD+ A ++FD+ V V+++ +I ++ G +A EL+ M G +P
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDV----VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVT-YNILLSWLCGLGKVVEACNLLD 181
+L + +++ + + EHG+ + Y+ L+ L G + EA L++
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 182 KMMSKGVTPSLVSYNHIILGHCR 204
M K P+ V + ++ CR
Sbjct: 383 NMPMK---PNSVIWGSLLFS-CR 401
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 52 NIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY 111
N++ T+++ G+ G A+K+F ++ +G+ P+ T I + + S+E+ + +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 112 NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLG 171
+ G+ V + L+ + K ++++ RL +E + V++ ++S G
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM---NVRDAVSWTAMVSAYAQFG 451
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK-GLKPNALTY 230
+ VE L DKM+ G+ P V+ +I R G ++ + + G+ P+ Y
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 231 TPLIDGFFKKGDFERA 246
+ +ID F + G E A
Sbjct: 512 SCMIDLFSRSGRLEEA 527
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A K+ +M+ G P T I C ++ E + + + SG+ + V+ SL+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ GDI+ + +LF+E+ +AV+++ ++ ++ G + +L+++M G++P
Sbjct: 415 LYGKCGDIDDSTRLFNEM----NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLD-EAVEHGIA-SVVTYNILLSWLCGLGKVVEACNL 179
+ ++ + ++E R E+GI S+ Y+ ++ G++ EA
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 180 LDKM 183
++ M
Sbjct: 531 INGM 534
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 27/250 (10%)
Query: 15 IPSEGTY-------TSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLG 67
IP+ G+Y ++I + +G +V A L D++ G ++ TSL+ + G
Sbjct: 32 IPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTG 91
Query: 68 DINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVK 127
++ A LF+ + E N VT + ++ K M +A+ L+ M + TV +
Sbjct: 92 YLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTA 147
Query: 128 FLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKG 187
G E+A L DE E +VV++N L++ L G + +A + D M S+
Sbjct: 148 LCDDGRS-----EDAVELFDEMPER---NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 188 VTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAF 247
V VS+N +I G+ M++A + + +K N +T+T ++ G+ + GD A+
Sbjct: 200 V----VSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAY 251
Query: 248 GVFEQMMAAN 257
+F +M N
Sbjct: 252 RLFCEMPERN 261
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 57 TSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
TS++ G+ GD++ A LF ++ + + VT++V+I + +A L + M
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVR 459
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRL---LDEAVEHGIASVVTYNILLSWLCGLGKV 173
G++P LL + L+ + + + ++ N L+S G +
Sbjct: 460 CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 174 VEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPL 233
+A + KM+ K VS+N +I+G G D A ++ +L G KPN++T+ +
Sbjct: 520 EDAYEIFAKMVQKDT----VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGV 575
Query: 234 IDGFFKKGDFERAFGVFEQM 253
+ G R +F+ M
Sbjct: 576 LSACSHSGLITRGLELFKAM 595
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 2 ACKLLKEMR-------ALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNII 54
A K+ +EM ++ I +E Y S+I + G ++ A+ + MV S N+
Sbjct: 184 AAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSK---NLE 240
Query: 55 VATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
++ H L + G N+ V ME L+ +M
Sbjct: 241 CRPTIRTYHILFKAL------------LGRGNNSYINHVY---------METVRSLFRQM 279
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE--AVEHGIASVVTYNILLSWLCGLGK 172
GI+P VF + L+KG+ + +A R+ + V + TY+ L+ LC G+
Sbjct: 280 VDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGR 339
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
+ A LL +M KG P+ SYN ++ G +DDA + +++ G + ++Y
Sbjct: 340 TINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRT 399
Query: 233 LIDGFFKKGDFERAFGVFEQM 253
L+D +KG ++ A + E +
Sbjct: 400 LVDESCRKGKYDEATRLLEML 420
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 39/256 (15%)
Query: 15 IPSEGTYTS-VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSAL 73
+P + + S +I C R RL + +S N+ V S+ K + N L
Sbjct: 35 LPRQSYWASRIISCCTRLRAPSYYTRL---IFDSVTFPNVFVVNSMFKYFSKMDMANDVL 91
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGF 133
+L+++ G+ P+A +F V+I + + G + +A ++ +G ++ ++ +
Sbjct: 92 RLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-----VEKLGFFKDPYVRNVIMDMY 146
Query: 134 QKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTP--- 190
K +E+A ++ D+ + + +N+++S G EAC L D M V
Sbjct: 147 VKHESVESARKVFDQISQRKGSD---WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 191 ------------------------SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPN 226
S+VS+N ++ G+ + G +DA + N +L+ G++PN
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 227 ALTYTPLIDGFFKKGD 242
T+ +I + D
Sbjct: 264 ETTWVIVISACSFRAD 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+ ++I R G++ A +L D M N++ SL+ G+ G A++ F+++
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 80 VEAGVA-PNAVT-FSVLIDCSS----KIGSMEKAFELYNRMKL--MGIQPTVFIVKFLLK 131
++ G + P+ VT SVL C ++G + N++KL G + +F+
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM------ 442
Query: 132 GFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
+ + L A R+ DE E VV+YN L + G VE NLL KM +G+ P
Sbjct: 443 -YARGGNLWEAKRVFDEMKER---DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTY 230
V+Y ++ R G + + RI K P A Y
Sbjct: 499 RVTYTSVLTACNRAGLLKEG----QRIFKSIRNPLADHY 533
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 19/246 (7%)
Query: 2 ACKLLKEMRALGWIPSEG--TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL 59
ACKL M P ++T +I + ++ A + D M V + ++
Sbjct: 186 ACKLFDMM------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAM 235
Query: 60 MKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGI 119
+ G+ G AL+LF++++ GV PN T+ ++I S L + +
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 120 QPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNL 179
+ F+ LL K +++A R+ +E ++VT+N ++S +G + A L
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ--RNLVTWNAMISGYTRIGDMSSARQL 353
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLIDGFF 238
D M + V VS+N +I G+ G A ++ G KP+ +T ++
Sbjct: 354 FDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG 409
Query: 239 KKGDFE 244
D E
Sbjct: 410 HMADLE 415
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++ +++ + G +ALRL ++M+ GV N ++ D + L I
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E V N + L+D +K ++ A ++N +G Q + ++ G+ + +
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE---LGTQRNLVTWNAMISGYTRIGDM 347
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVT-PSLVSYNHI 198
+A +L D + +VV++N L++ G+ A + M+ G + P V+ +
Sbjct: 348 SSARQLFDTMPKR---NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
Query: 199 I--LGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAA 256
+ GH + D +++ I K +K N Y LI + + G+ A VF++M
Sbjct: 405 LSACGHMADLELGDC--IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 257 NANLQITQFTPL 268
+ T FT
Sbjct: 463 DVVSYNTLFTAF 474
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T + + C+ N+ L++ +V SG ++ IV + L+ H +G+I A KLF +
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 80 VEAGVAPNA--VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
PN + FS LI K G AF L+ + +G+ FIV +LK
Sbjct: 404 ------PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLA 457
Query: 138 MLENAYRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYN 196
L ++ ++ G S VT L+ G++ L D M+ + V VS+
Sbjct: 458 SLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDV----VSWT 513
Query: 197 HIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
II+G + G +++A+ ++++ G++PN +T+ L+ G E A E M
Sbjct: 514 GIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM 570
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 24 VIGTCVRQGNVVEALR----LKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+I +R V+A + ++ ++ G+ N+ +A +++ + ++ A K+FDE+
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT-VFIVKFLLKGFQKQNM 138
E N VT++ ++ + G KA ELY RM + F+ +LK
Sbjct: 67 SER----NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 139 LENAYRLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
++ + + + + VV N ++ G+++EA + +++ PS S+N
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR----PSSTSWNT 178
Query: 198 IILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
+I G+C+ G MD+A ++ +R+ +PN +++ LI GF KG
Sbjct: 179 LISGYCKAGLMDEAVTLFHRM----PQPNVVSWNCLISGFVDKG 218
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 10/253 (3%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+A L +E+ LG + ++++ C ++ ++ + G + AT+L+
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALV 485
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
+ G+I++ + LFD ++E V V+++ +I + G +E+AF +++M +GI+
Sbjct: 486 DMYVKCGEIDNGVVLFDGMLERDV----VSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDE-AVEHGIASVVT-YNILLSWLCGLGKVVEACN 178
P LL + +LE A L+ E+G+ + Y ++ L G EA
Sbjct: 542 PNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANE 601
Query: 179 LLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFF 238
L++KM + P + +L C +V+ L KG + YT L + +
Sbjct: 602 LINKM---PLEPDKTIWTS-LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 239 KKGDFERAFGVFE 251
G +++ V E
Sbjct: 658 TLGMWDQLSKVRE 670
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 59 LMKGHCLLGDINSALKL----FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
LMKG CL G + A L F I + G + V + +L+D G ++ A E+ ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNM--LENAYRLLDEAVEHG-IASVVTYNILLSWLCGLG 171
G++ + G + + +E RLL E + G I + +Y+ + + L G
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTY 230
K+VE +L M SKG P+ Y + CR G + +A SV+N+ + +G P Y
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 231 TPLIDGFFKKGDFERAFGVFEQM 253
LI G G A G ++M
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKM 395
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
+ + SVI T R G + +A+ L + + +L++ ++ +A +F
Sbjct: 81 DSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFR 140
Query: 78 EIVEAGVAPNAVT-FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+ + +T ++L+ ++ + A +++ M G P + L+KGF +
Sbjct: 141 KYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLE 200
Query: 137 NMLENA----YRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
LE A Y + + G +V Y ILL LC G+V +A +L K++ KG+
Sbjct: 201 GKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 192 LVSYNHIILGHCRKGC--MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
Y+HI GH ++ ++ L +G P +Y+ + F++G
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 59 LMKGHCLLGDINSALKL----FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRM 114
LMKG CL G + A L F I + G + V + +L+D G ++ A E+ ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 115 KLMGIQPTVFIVKFLLKGFQKQNM--LENAYRLLDEAVEHG-IASVVTYNILLSWLCGLG 171
G++ + G + + +E RLL E + G I + +Y+ + + L G
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 172 KVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTY 230
K+VE +L M SKG P+ Y + CR G + +A SV+N+ + +G P Y
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 231 TPLIDGFFKKGDFERAFGVFEQM 253
LI G G A G ++M
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKM 395
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
Query: 18 EGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFD 77
+ + SVI T R G + +A+ L + + +L++ ++ +A +F
Sbjct: 81 DSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFR 140
Query: 78 EIVEAGVAPNAVT-FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+ + +T ++L+ ++ + A +++ M G P + L+KGF +
Sbjct: 141 KYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLE 200
Query: 137 NMLENA----YRLLDEAVEHGIAS-VVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
LE A Y + + G +V Y ILL LC G+V +A +L K++ KG+
Sbjct: 201 GKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 192 LVSYNHIILGHCRKGC--MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
Y+HI GH ++ ++ L +G P +Y+ + F++G
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L EM + G S T+ SV+ C + E +++ +++ G N+ V ++L+
Sbjct: 96 AIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ L ++ ALKLFDE+++ +A ++L+ C + G ++ FE+Y RM+L G+
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLA----VCNLLLRCFCQTGESKRLFEVYLRMELEGVAK 211
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHG--IASVVTYNILLSWLCGLGKVVEACNL 179
++++G ++ +L V+ G I+++ N+L+ + G +L
Sbjct: 212 NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG------DL 265
Query: 180 LDKMMSKGVTP--SLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGF 237
M S P ++S+N I+ G + D+ + +++ G +P+ + ++
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFC 325
Query: 238 FKKGDFE 244
+ D +
Sbjct: 326 SRNSDIQ 332
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 36/198 (18%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
F LI+ + G E L N ++G T KFL + LE+ R+L + +
Sbjct: 42 FDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLPQ-I 100
Query: 151 EHGIASVVTYNILLSWLCGLG-----------------------------------KVVE 175
+ G + Y+IL+S LC LG K+ E
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEE 160
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
A +++ M SK V+ + +YN+ + HC G ++ A VM +I + G P++ +Y L+
Sbjct: 161 AWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVL 220
Query: 236 GFFKKGDFERAFGVFEQM 253
G + G E A + +M
Sbjct: 221 GACRAGKVEAAMAILRRM 238
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMK--LMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
+ +LI K+G ++ A + M +G+ P+ + +L ++ +E A+R+++
Sbjct: 110 YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTY--HPILCSLTRKYKIEEAWRVVES 167
Query: 149 AVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
++ V YN L+ C G++ A ++ K+ G +P SY+ ++LG CR G
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGK 227
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANLQI 262
++ A +++ R+ + G+ T+ +I G + G + A G+ M A +L++
Sbjct: 228 VEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYY--ALGLEFVMAYAGKDLRL 280
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM--------------KGHCL 65
++ S+I CVRQG + EAL + M + ++ S++ HCL
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 66 L----------------------GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGS 103
+ G ++SALK+F+ ++E V ++++ L+ ++ GS
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDV----ISWTALVTGNTHNGS 410
Query: 104 MEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTY-NI 162
++A +L+ M++ GI P + +L + +LE ++ ++ G S ++ N
Sbjct: 411 YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNS 470
Query: 163 LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK-K 221
L++ G + +A + + M + L+++ +I+G+ + G ++DA + +
Sbjct: 471 LVTMYTKCGSLEDANVIFNSMEIR----DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVY 526
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G+ P Y +ID F + GDF + + QM
Sbjct: 527 GITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 115/240 (47%), Gaps = 15/240 (6%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
L++ MR P E T+ V+ C G V + ++ G +++V TS + +
Sbjct: 97 LMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYG 156
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVF 124
D+ SA K+F E+ E NAV+++ L+ K G +E+A +++ M + +
Sbjct: 157 KCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMP----ERNLG 208
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMM 184
L+ G K L NA +L DE + I ++Y ++ G +V A +L ++
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMPKRDI---ISYTSMIDGYAKGGDMVSARDLFEE-- 263
Query: 185 SKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFE 244
++GV + +++ +ILG+ + G ++A+ V + + K +KP+ L+ + G FE
Sbjct: 264 ARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
G++ +++ V+ G++V A +L DEM +II TS++ G+ GD+ SA LF+E
Sbjct: 208 GSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEE 263
Query: 79 IVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNM 138
GV A +S LI ++ G +AF++++ M ++P FI+ L+ +
Sbjct: 264 A--RGVDVRA--WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGC 319
Query: 139 LENAYRLLDEAVEHGIASVVTYNI---LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
E ++ D + + ++ + L+ G + A L ++M + LVSY
Sbjct: 320 FELCEKV-DSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR----DLVSY 374
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
++ G GC +A + +++ +G+ P+ + +T ++
Sbjct: 375 CSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 46/287 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L ++M G+ P E T S++G C G++ L++ + + ++ + + L+
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 62 GHCLLGDINSA-------------------------------LKLFDEIVEAGVAPNAVT 90
+ GD++SA KLF E+ + GV+P+A T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 91 FSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAV 150
S ++ +G++E ++ + +Q +++ L+ + K +E A R+ EA+
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF-EAM 395
Query: 151 EHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII-----LGHCRK 205
+ + T+N +++ G EA L D+M V PS +++ ++ G +
Sbjct: 396 P--VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQ 450
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
GC + M+ + GL P YT +ID + G + A+ E+
Sbjct: 451 GCR--YFHEMSSMF--GLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 119/303 (39%), Gaps = 45/303 (14%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L + M+ G P + TY V C + + + + G+ ++ + SL+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+ G + A KLFDEI E + V+++ +I S+ G + A +L+ +M+ G +P
Sbjct: 176 MYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 122 -----------------------------------TVFIVKFLLKGFQKQNMLENAYRLL 146
+ F+ L+ + K L++A R+
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 147 DEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKG 206
++ ++ V + +++ GK EA L +M GV+P + + ++ G
Sbjct: 292 NQMIK---KDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 207 CMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA---NLQIT 263
++ + + L+ N T L+D + K G E A VFE M N N IT
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 264 QFT 266
+
Sbjct: 409 AYA 411
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 66 LGDINSALKLFDEIVEAGVAPNAVTFSVLID-CSSKIGSMEKAFELYNRMKLMGIQPTVF 124
LGD N + LF E PN +F+ +I ++ E A LY RMK G++P F
Sbjct: 78 LGDFNYSSFLFSVTEE----PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKF 133
Query: 125 IVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYN---ILLSWLCGLGKVVEACNLLD 181
F+ K + + + G+ V N I++ C G+V A L D
Sbjct: 134 TYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC--GQVGYARKLFD 191
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKG 241
++ + VS+N +I G+ G DA + ++ ++G +P+ T ++ G
Sbjct: 192 EITERDT----VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 242 DFERAFGVFEQM 253
D R + E+M
Sbjct: 248 DL-RTGRLLEEM 258
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 134/261 (51%), Gaps = 23/261 (8%)
Query: 4 KLLKE-MRALGWI--PSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
KLL+E ++ LG P TY ++I C + + E ++ + + SG I++ L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNA--VTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
+ + G + A K+FDE+ PN +++V+++ +++G +E+A +L++ M
Sbjct: 128 RMYAKCGSLVDARKVFDEM------PNRDLCSWNVMVNGYAEVGLLEEARKLFDEM---- 177
Query: 119 IQPTVFIVKFLLKGFQKQNMLENA---YRLLDEAVEHGIASVVTYNILLSWLCGLGKVVE 175
+ + ++ G+ K++ E A Y L+ + V + ++ T +I ++ + +
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLM-QRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 176 ACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ ++ G+ V ++ ++ + + GC+D+A ++ ++I++K + +++T +ID
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DVVSWTSMID 292
Query: 236 GFFKKGDFERAFGVFEQMMAA 256
+FK + F +F +++ +
Sbjct: 293 RYFKSSRWREGFSLFSELVGS 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 40/258 (15%)
Query: 28 CVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVA-- 85
C+R+G + +V +G+ + ++ +SLM + G I+ A +FD+IVE V
Sbjct: 233 CIRRGKEIHG-----HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287
Query: 86 -----------------------------PNAVTFSVLIDCSSKIGSMEKAFELYNRMKL 116
PN TF+ +++ + + + E +++ M
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347
Query: 117 MGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEA 176
+G P F L+ + K +E+A ++D + +V++ L+ G+ EA
Sbjct: 348 VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK---PDLVSWTSLIGGCAQNGQPDEA 404
Query: 177 CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKG-LKPNALTYTPLID 235
D ++ G P V++ +++ G ++ I +K L + YT L+D
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 236 GFFKKGDFERAFGVFEQM 253
+ G FE+ V +M
Sbjct: 465 LLARSGRFEQLKSVISEM 482
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
M+ G + TYTS+I G+V A+RL +EM ++G ++ T+ MK G
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
+ A +++ E++ + V+PN T++VL++ G E+A +++ +M+ +G+QP
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGV 188
L+ K R+L E+G+ V+ Y I + L L E+ +LL ++ S
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKENGV--VLRYPIFVEALETLKAAGESDDLLREVNSHIS 325
Query: 189 TPSLVS 194
SL S
Sbjct: 326 VESLCS 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 104 MEKAFELYN-RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGI-ASVVTYN 161
M+KA+ +N ++ G + F +L F + +++ Y + E G+ VTY
Sbjct: 102 MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYT 161
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
L+ W+ G V A L ++M G P++VSY + G +++A V +L+
Sbjct: 162 SLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ PN TYT L++ G E A +F +M
Sbjct: 222 RVSPNCHTYTVLMEYLVATGKCEEALDIFFKM 253
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 38/207 (18%)
Query: 13 GWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSA 72
G+ TYT+++ G + + M GV ++ + TSL+ GD++ A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 73 LKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKG 132
++L++E+ + G P V+++ + G +E+A E+Y M + P
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH-------- 228
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
TY +L+ +L GK EA ++ KM GV P
Sbjct: 229 --------------------------TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDK 262
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRIL 219
+ N +I + G S M R+L
Sbjct: 263 AACNILIAKALKFG----ETSFMTRVL 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +EMR G P+ +YT+ + G V EA + EM+ S V N T LM+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G AL +F ++ E GV P+ ++LI + K G + MK G+
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV-- 293
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEH-GIASVVTYNI------------------ 162
V ++ + + LL E H + S+ + +I
Sbjct: 294 -VLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSR 352
Query: 163 -LLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
+ S L +V LL++M + + + II +C + + A + L+
Sbjct: 353 VISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEM 412
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANANL 260
G+ Y LI F + + + V ++M+ A +L
Sbjct: 413 GIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSL 451
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLL-GDINSALKLFDEIVEAGVAPN 87
V G V++A ++ DEM P I +M G C G +L F E+ + G+ +
Sbjct: 62 VECGKVLDARKVFDEM-----PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 88 AVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLD 147
A L+ S + E ++ + + FIV L+ + K + NA ++
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 148 EAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGC 207
+ E +V +N ++S + EA NL+ M G+ P ++++N +I G
Sbjct: 177 DLGEQ---DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 208 MDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+ ++ + G KP+ +++T +I G E+AF F+QM+
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 24 VIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAG 83
+IG C R G E+L EM G+ ++ + SL+K L D + +++
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 84 VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAY 143
+A S LID SK G + A ++++ +G Q V + ++ G+ + + A
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSD---LGEQDLV-VFNAMISGYANNSQADEAL 203
Query: 144 RLLDEAVEHGI-ASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGH 202
L+ + GI V+T+N L+S + + +L+ M G P +VS+ II G
Sbjct: 204 NLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 203 CRKGCMDDAYSVMNRILKKGLKPNALTYTPLI 234
+ A+ ++L GL PN+ T L+
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 13/251 (5%)
Query: 9 MRALGWIPSE------GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKG 62
M+ L +PS G+Y +I R L +V SG+ +A L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 63 HCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPT 122
+ G + A K+FDE+ + ++ V +I ++ G +++ + + M G++
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVV----MIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 123 VFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDK 182
FIV LLK +N+L+ + + + + I+ S + K E N K
Sbjct: 117 AFIVPSLLKA--SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA-RK 173
Query: 183 MMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGD 242
+ S LV +N +I G+ D+A +++ + G+KP+ +T+ LI GF +
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 243 FERAFGVFEQM 253
E+ + E M
Sbjct: 234 EEKVSEILELM 244
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 8/255 (3%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A L+K+M+ LG P T+ ++I N + + + M G +++ TS++
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
G A F +++ G+ PN+ T L+ + + M+ E++ + G++
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLED 321
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLD 181
F+ LL + K + A L + + + VT+N ++ G +A L D
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPK---KTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 182 KMMSKGVTPSLVSYNHIILGHCRKGCMD---DAYSVMNRILKKGLKPNALTYTPLIDGFF 238
+M + G +++ I+ G D + + +M K + P Y ++D
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN--KYRIVPRLEHYACMVDLLG 436
Query: 239 KKGDFERAFGVFEQM 253
+ G A+ + + M
Sbjct: 437 RAGKLVEAYEMIKAM 451
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 9 MRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGD 68
+RA W+ S + + + N+ + +L +++ + ++ +A L+ L
Sbjct: 7 VRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ 66
Query: 69 INSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF 128
N A+++F+++ E PN + LI ++ +AF +++ M+ G+ F F
Sbjct: 67 TNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPF 122
Query: 129 LLKGFQKQNMLENAYRLLDEAVEHGIAS-VVTYNILLSWL--CGLGKVVEACNLLDKMMS 185
LLK Q+ L + + + G++S + N L+ CG V +A L +KM
Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE 182
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
+ VS+N ++ G + G + DA + + + ++ L +++ ++DG+ + + +
Sbjct: 183 RDT----VSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSK 234
Query: 246 AFGVFEQMMAAN 257
AF +FE+M N
Sbjct: 235 AFELFEKMPERN 246
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 119/251 (47%), Gaps = 50/251 (19%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
++ S++G V+ G + +A RL DEM ++I +++ G+ +++ A +LF+++
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E N V++S ++ SK G ME A ++++M L + + ++ G+ ++ +L
Sbjct: 243 PER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI--IIAGYAEKGLL 296
Query: 140 ENAYRLLDEAVEHGI----ASVVT--------------------------------YNIL 163
+ A RL+D+ V G+ A+V++ N L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 164 LSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGL 223
L G + +A ++ + + K LVS+N ++ G G +A + +R+ ++G+
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 224 KPNALTYTPLI 234
+P+ +T+ ++
Sbjct: 413 RPDKVTFIAVL 423
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 34 VVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSV 93
V +A++L ++M + + S++ G G++ A +LFDE+ + + ++++
Sbjct: 170 VRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNT 221
Query: 94 LIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLKGFQKQNMLENAYRLLDEAVE 151
++D ++ M KAFEL+ +M P V + ++ G+ K +E A R++ + +
Sbjct: 222 MLDGYARCREMSKAFELFEKM------PERNTVSWSTMVMGYSKAGDMEMA-RVMFDKMP 274
Query: 152 HGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDA 211
+VVT+ I+++ G + EA L+D+M++ G+ + I+ G +
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 212 YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+ + + + L NA L+D + K G+ ++AF VF +
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 75 LFDEIVEAGVAPNAVTFSVLIDCSSKIGSM--EKAFELYNRMKLMGIQPTVFIVKFLLKG 132
+ + I + G++ + + LIDC S+ G + A +L+ +M + +L G
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS----ERDTVSWNSMLGG 194
Query: 133 FQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSL 192
K L +A RL DE + + +++N +L ++ +A L +KM +
Sbjct: 195 LVKAGELRDARRLFDEMPQRDL---ISWNTMLDGYARCREMSKAFELFEKMPERNT---- 247
Query: 193 VSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQ 252
VS++ +++G+ + G M+ A + +++ N +T+T +I G+ +KG + A + +Q
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 253 MMAA 256
M+A+
Sbjct: 306 MVAS 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
T+T +I +G + EA RL D+MV SG+ + S++ G ++ +++ +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
+ + NA + L+D +K G+++KAF+++N + K+++
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-------------------KKDL- 381
Query: 140 ENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHII 199
V++N +L L G EA L +M +G+ P V++ ++
Sbjct: 382 ------------------VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Query: 200 LGHCRKGCMD---DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
G +D D + M ++ L P Y L+D + G + A V + M
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYD--LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 43 EMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIG 102
+M GV ++ + M C G A+KL+ E+ + + V ++ +I
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 103 SMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYN 161
+E ++ M+ G +P V ++K + + +AYR+LDE + G +TY
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 162 ILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKK 221
L S L K E +L +M+ GV P + +Y ++ R G + V + +
Sbjct: 334 CLFS---RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES 390
Query: 222 GLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
G P++ Y +ID +KG + A E+M+
Sbjct: 391 GDTPDSAAYNAVIDALIQKGMLDMAREYEEEMI 423
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 4/208 (1%)
Query: 20 TYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEI 79
+Y+ + + G +A++L EM + + ++++ ++++ + +++F E+
Sbjct: 226 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 80 VEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNML 139
E G PN T + +I + G M A+ + + M G QP L +K + +
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI 345
Query: 140 ENAY-RLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHI 198
+ + R++ V + TY +L+ G + + M G TP +YN +
Sbjct: 346 LSLFGRMIRSGVR---PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 402
Query: 199 ILGHCRKGCMDDAYSVMNRILKKGLKPN 226
I +KG +D A ++++GL P
Sbjct: 403 IDALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 15 IPSEGTYTSVIGTCVRQGNVVEALRL--KDEMVNSGVPV-NIIVATSLMKGHCLLGDINS 71
+ E ++ +++ +VVEA L ++ +G V N + +++G LG
Sbjct: 148 LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGK 207
Query: 72 ALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLK 131
+ + ++ GV + ++S+ +D K G KA +LY MK ++
Sbjct: 208 CKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMK----------- 256
Query: 132 GFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPS 191
LD VV YN ++ + V + +M +G P+
Sbjct: 257 --------------LD---------VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 192 LVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFG 248
+ ++N II C G M DAY +++ + K+G +P+++TY L K + FG
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFG 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 4 KLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGH 63
++ +EMR G P+ T+ ++I G + +A R+ DEM G + I L
Sbjct: 280 RVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF--- 336
Query: 64 CLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTV 123
L + L LF ++ +GV P T+ +L+ + G ++ ++ MK G P
Sbjct: 337 SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDS 396
Query: 124 FIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA 155
++ ++ ML+ A +E +E G++
Sbjct: 397 AAYNAVIDALIQKGMLDMAREYEEEMIERGLS 428
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 29 VRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNA 88
VR + +AL+L D M + + T+L+KG+ + A++LF E+ G+ N
Sbjct: 118 VRSRRLWDALKLFDVMPER----SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNE 173
Query: 89 VTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
VT + +I S +G + L + + ++ VF+ LL + L++A +L DE
Sbjct: 174 VTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE 233
Query: 149 AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
E + VT+N++L+ G + +A L D++ K + VS+ +I G RK +
Sbjct: 234 MPERNL---VTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCLRKNQL 286
Query: 209 DDAYSVMNRILKKGLKPNALTYTPLI 234
D+A +L+ G+KP+ + L+
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLL 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 45/268 (16%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMK 61
A +L +EMR LG + +E T +VI C G + + L+ + + + V+T+L+
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 62 GHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQP 121
+CL + A KLFDE+ E N VT++V+++ SK G +E+A EL++++ +
Sbjct: 217 MYCLCLCLKDARKLFDEMPE----RNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEK 268
Query: 122 TVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGL--GKVVEACNL 179
+ ++ G ++N L+ A +V Y +L CG+ +V+ L
Sbjct: 269 DIVSWGTMIDGCLRKNQLDEA--------------LVYYTEMLR--CGMKPSEVMMVDLL 312
Query: 180 LDKMMSKGVTPSLVSYNHIILGHCRKG--CMD-------DAYSVMNRI------LKKGLK 224
S G + L + I+ ++G C D Y+V N I + +K
Sbjct: 313 SASARSVGSSKGLQLHGTIV----KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 225 PNALTYTPLIDGFFKKGDFERAFGVFEQ 252
+ + LI GF K G E+A VF+Q
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQ 396
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 118/275 (42%), Gaps = 54/275 (19%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSL--MKGHC-LLGDINSAL 73
+E S +G+C +V ++ ++ SG+ N + S+ M C LL D S
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 74 KLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKF--LLK 131
+ ++ ++ +F++++D ++ L++ +KL + P V + L+K
Sbjct: 100 RDHAKL-------DSASFNIMVD------GYVRSRRLWDALKLFDVMPERSCVSYTTLIK 146
Query: 132 GFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLS--------WLCGL-----------G 171
G+ + N A L E GI + VT ++S W C + G
Sbjct: 147 GYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG 206
Query: 172 KVVEACNLLD------------KMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRIL 219
+V + NLL K+ + +LV++N ++ G+ + G ++ A + ++I
Sbjct: 207 RVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT 266
Query: 220 KKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMM 254
+K + +++ +IDG +K + A + +M+
Sbjct: 267 EKDI----VSWGTMIDGCLRKNQLDEALVYYTEML 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 19 GTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDE 78
+ ++I V+ G V +A + D+ + +I +++ G+ AL LF E
Sbjct: 372 ASRNALIAGFVKNGMVEQAREVFDQTHDK----DIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 79 IVEAG-VAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQN 137
++ + V P+A+T + S +GS+E+ ++ + I P + ++ + K
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 138 MLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNH 197
+E A + + +++ +N ++ G A +L + S + P+ +++
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 198 IILGHCRKGCMDDAYSVMNRILK-KGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ C G ++ + + G++P+ Y ++D K G E A + ++M
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 2 ACKLLKEMRALGWIPSEGTYT--------------------------SVIGTC-----VR 30
A L EM+ G P+E TY+ S +GT V+
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 31 QGNVVEALRLKDEMVNSGVPVNIIVATSLM-KGHCLLGDINSALKLFDEIVEAGVAPNAV 89
G V EA + V SG+ IVA S M G+ G+ +A+K+F E+ + G+ PN
Sbjct: 441 LGKVEEAAK-----VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 90 TFSVLID-CSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDE 148
TFS +++ C++ SM + + + + ++ + LL + K+ +E+A +
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 149 AVEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCM 208
E + V++N ++S G+ ++A ++ +M + V V++ + G +
Sbjct: 556 QREKDL---VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 209 DDA---YSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
++ + +M R K + P + ++D + + G E+A V E M
Sbjct: 613 EEGEKYFDIMVRDCK--IAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 1 MACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLM 60
+ C+ +K G++ TS++ T ++ N + ++ DEM N++ T+L+
Sbjct: 115 LHCQCIK----FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLI 166
Query: 61 KGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQ 120
G+ + L LF + G PN+ TF+ + ++ G + +++ + G+
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 121 PTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEA---- 176
T+ + L+ + K + A L D+ + SVVT+N ++S G +EA
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKT---EVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 177 ----------------------CNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSV 214
NL + ++ + S+V Y + + R M AYS
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM-VAYSK 342
Query: 215 MN------RILKK-GLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
R+ K+ G N +++T +I GF + E A +F +M
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 55/243 (22%)
Query: 3 CKLLKEMR----------ALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVN 52
C LKE+R G++ + T+++ + +++ALRL E+ G N
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGN 361
Query: 53 IIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYN 112
++ T+++ G A+ LF E+ GV PN T+SV++
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--------------- 406
Query: 113 RMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGK 172
L I P+ + + +++ + + A LLD V+ LGK
Sbjct: 407 ---LPVISPSEVHAQVVKTNYERSSTVGTA--LLDAYVK------------------LGK 443
Query: 173 VVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTP 232
V EA + + K + V+++ ++ G+ + G + A + + K G+KPN T++
Sbjct: 444 VEEAAKVFSGIDDKDI----VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 233 LID 235
+++
Sbjct: 500 ILN 502
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 130/293 (44%), Gaps = 42/293 (14%)
Query: 5 LLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHC 64
LL+E + Y +I +C G + +A+++ + + S +N+ + ++++ +
Sbjct: 510 LLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYT 569
Query: 65 LLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKA---FELYNRMKLMGIQP 121
++G+ + A KL+ + +GV + + FS+++ K GS+E+A E+ + K I P
Sbjct: 570 VMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK--DIVP 627
Query: 122 TVFIVKFLLKGFQK---QNMLENAYRLL-------------------------------- 146
V++ + +L+ +QK Q+ L++ Y +
Sbjct: 628 DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTF 687
Query: 147 DEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRK 205
+E + +G + VT+N+LL + G K+ + N L + + ++SYN II + +
Sbjct: 688 EEMIRYGFTPNTVTFNVLLD-VYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 206 GCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA 258
+ S + + G + Y L+D + K E+ + ++M + +
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS 799
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 67 GDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIV 126
G++ A K F ++E GV PN T +L+ K ++E+A ++ M+ GI
Sbjct: 224 GNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AY 282
Query: 127 KFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMS 185
++ + + + + A ++D + + + + ++L+ GK+ A ++L M +
Sbjct: 283 SSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEA 342
Query: 186 KGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFER 245
G +P++++YN +I G+ + M+ A + +R+ GL+P+ +Y +I+G+ + ++E
Sbjct: 343 AGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEE 402
Query: 246 AFGVFEQM 253
A ++++
Sbjct: 403 AKHYYQEL 410
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 17 SEGTYTSVIGTCVRQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLF 76
S + +VI C ++GNV A + M+ GV N+ LM + ++ A F
Sbjct: 209 SYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAF 268
Query: 77 DEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQ 136
+ + G+ + +S +I +++ +KA E+ + MK ++ + +L + +Q
Sbjct: 269 SHMRKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQ 327
Query: 137 NMLENAYRLLDEAVEHGIA-SVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSY 195
+E A +L G + +++ YN L++ + K+ A L ++ + G+ P SY
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSY 387
Query: 196 NHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQM 253
+I G R ++A + + G KPN+ LI+ K GD + A E M
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 118/273 (43%), Gaps = 11/273 (4%)
Query: 2 ACKLLKEMRALGWIPSEGTYTSVIGTCVRQGNVVEA---LRLKDEMVNSGVPVNIIVATS 58
A KL +++ G + ++ V+ V+ G++ EA L + DE + V +
Sbjct: 577 AEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDML 636
Query: 59 LMKGHCLLGDINSALKLFDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELYNRMKLMG 118
+ C L D L+ I ++G+ N ++ +I+C ++ +++ + M G
Sbjct: 637 RIYQKCDLQD--KLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 694
Query: 119 IQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIASVVTYNILLSWLCGLGKVVEACN 178
P LL + K + + L A HG+ V++YN +++ GK + N
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIA---AYGKNKDYTN 751
Query: 179 L---LDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILKKGLKPNALTYTPLID 235
+ + M G + SL +YN ++ + + M+ S++ R+ K P+ TY +I+
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 236 GFFKKGDFERAFGVFEQMMAANANLQITQFTPL 268
+ ++G + V +++ + + + L
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTL 844
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 76 FDEIVEAGVAPNAVTFSVLIDCSSKIGSMEKAFELY------------------------ 111
F+E++ G PN VTF+VL+D K +K EL+
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 112 ----------NRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEAVEHGIA-SVVTY 160
M+ G ++ LL + K +E +L + TY
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 161 NILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMDDAYSVMNRILK 220
NI+++ G + E ++L ++ G+ P L SYN +I + G +++A ++ +
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 221 KGLKPNALTYTPLIDGFFKKGDFERA 246
+ + P+ +TYT L+ + +F A
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 2/236 (0%)
Query: 30 RQGNVVEALRLKDEMVNSGVPVNIIVATSLMKGHCLLGDINSALKLFDEIVEAGVAPNAV 89
+QG + A + M +G NII +L+ G+ + + +A LF + G+ P+
Sbjct: 326 QQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDET 385
Query: 90 TFSVLIDCSSKIGSMEKAFELYNRMKLMGIQPTVFIVKFLLKGFQKQNMLENAYRLLDEA 149
++ +I+ + + E+A Y +K G +P F + L+ K + A + +++
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 150 VEHGIASVVTYNILLSWLCGLGKVVEACNLLDKMMSKGVTPSLVSYNHIILGHCRKGCMD 209
G I+L +GK+ +L + + S++ +++ + + G +D
Sbjct: 446 TGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVD 505
Query: 210 DAYSVMNRILKKGLKPNALTYTPLIDGFFKKGDFERAFGVFEQMMAANA--NLQIT 263
D ++ + + Y LI + G A ++ M ++ NL IT
Sbjct: 506 DCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561