Miyakogusa Predicted Gene
- Lj2g3v3337600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3337600.1 tr|Q5W964|Q5W964_9BRYO PpPPR_98 protein
OS=Physcomitrella patens GN=PpPPR_98 PE=2 SV=1,29.41,2e-18,no
description,Tetratricopeptide-like helical; seg,NULL; PPR:
pentatricopeptide repeat domain,Pentat,gene.g44630.t1.1
(608 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 522 e-148
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 496 e-140
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 474 e-134
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 473 e-133
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 471 e-133
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 470 e-132
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 469 e-132
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 462 e-130
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 459 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 456 e-128
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 454 e-128
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 450 e-126
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 444 e-125
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 443 e-124
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 442 e-124
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 439 e-123
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 431 e-120
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-120
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 430 e-120
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 421 e-118
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 418 e-117
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 416 e-116
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 395 e-110
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 394 e-109
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 390 e-108
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 387 e-107
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 387 e-107
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 385 e-107
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-107
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 384 e-107
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 380 e-105
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 374 e-104
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-104
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 364 e-100
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 352 6e-97
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 350 1e-96
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 341 8e-94
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 340 1e-93
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 6e-93
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 7e-92
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 3e-91
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 330 2e-90
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 3e-90
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 329 3e-90
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 323 3e-88
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 5e-87
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 2e-86
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 313 2e-85
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 310 2e-84
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 1e-83
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 307 2e-83
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 301 6e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 3e-81
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 6e-81
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 293 2e-79
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 293 3e-79
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 6e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 1e-72
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 1e-71
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 263 3e-70
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 3e-69
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 9e-62
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 204 2e-52
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 7e-51
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 145 6e-35
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 132 1e-30
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 2e-30
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 1e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 3e-28
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 9e-28
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 5e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 6e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 4e-25
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 113 5e-25
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 100 2e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 94 3e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 6e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 6e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 4e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 1e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 78 2e-14
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 77 4e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 3e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 69 6e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 4e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 56 7e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 5e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 6e-06
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 275/652 (42%), Positives = 400/652 (61%), Gaps = 48/652 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ +P L+ WN + + + AL L+ M+ LLP+ +T P V+K C++ A +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QIHG+VLK+G D +V +SL++MY + G + A KVFDK RDVVS+ +LI GYA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVS--- 171
G +E A KLFDE+P +D +W A++ G A+ G + A E+F M P +S++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 172 -----------------W-------------NAMINGYMKSGKINLARQLFGQMPGRNLI 201
W NA+I+ Y K G++ A LF ++P +++I
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
SWN++I GY + EA+ LF+ +L+ G P+ VT+LS L A + L + GRWIH ++
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 262 VKHCFDLDGV-----LGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
K L GV L TSLI+MY+KCG IE+A VF +I +K L W A+I G MHG
Sbjct: 394 DKR---LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
AD + +LF MR+IG++P ITF+G+L+ACSH G++D G F M +YK+ P +EHYG
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
C++D+L +G ++A+ +I M M P+ VIW SLL + + HGN+E+GE A NLI+ +P+
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
G Y LLSNIYA+AG+W++V+ R ++ ++G+ K GCS +E ++ FI+GDK HP+
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Query: 497 TKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERR 556
+ IY L EM L+ AG VPDTS+VL +LAI+FGL++ +
Sbjct: 631 NREIYGMLEEMEVLLEKAGFVPDTSEVL-QEMEEEWKEGALRHHSEKLAIAFGLISTKPG 689
Query: 557 TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
T + I+KNLRVC +CH TKL+S IY REII RD +RFHHF++G CSCND+W
Sbjct: 690 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 40/316 (12%)
Query: 134 PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGK---IN 186
P D+ L L C +++ R + QM K ++ + + +I + S +
Sbjct: 26 PPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP 85
Query: 187 LARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
A +F + NL+ WN+M G+ L+ + A++L+ ++ GL+P+ T L + +
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 247 GLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS--------------------- 285
G+ IH ++K DLD + TSLI MY + G
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 286 ----------IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
IE+A +F I K + W A+I G G +ALELF +M + ++P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
T + V++AC+ G ++ G + + I+++ ++ L+D+ + G L+ A +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 396 ESMPMRPNKVIWMSLL 411
E +P + + + W +L+
Sbjct: 325 ERLPYK-DVISWNTLI 339
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 380/647 (58%), Gaps = 41/647 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQEGK 61
KP +WN +I Y ++ F M+ P+ +T P +IK + + ++ G+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+HG +K G D FV +SL++ Y G++ A KVF + ++DVVSWNS+I+G+ + G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 122 NVEVAMKLFDEMPSRDAFT---------------------------------------WT 142
+ + A++LF +M S D
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
A+LD KCG +E A+ +FD M +K +V+W M++GY S AR++ MP +++++
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 203 WNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
WN++IS Y+ NG+ EA+ +F E+ L++ + + +T++S LSA + + L GRWIHS++
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
KH ++ + ++LI MYSKCG +E + VF ++ + + W+A+I GL MHG ++A+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDI 381
++F +M+ +KP+ +TF V ACSH GLVDE F M + Y IVP +HY C+VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 382 LCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY 441
L R+G+L++A IE+MP+ P+ +W +LL + + H NL + E A L+E +P G +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 442 TLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIY 501
LLSNIYA GKW+ VS +R+ M+ G+ K+ GCS +E G ++ F+ GD +HP ++ +Y
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 502 AKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRI 561
KL E+ +KLK G+ P+ SQVL +LAI +GL++ E IR+
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 562 MKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+KNLRVC DCH+V KL+S +Y REIIVRD RFHHF+NG CSCNDFW
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 203/410 (49%), Gaps = 47/410 (11%)
Query: 53 RLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYA--KWGEMGLARKVFDKMVDRDVVSW 110
R ++++ KQ HG++++ G D + S L M A + + ARKVFD++ + +W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 111 NSLIDGYARNGNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMP 165
N+LI YA + +++ F +M S + +T+ L+ A+ + + + M
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG-MA 157
Query: 166 KKSSVS-----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
KS+V N++I+ Y G ++ A ++F + ++++SWNSMI+G+ G +A+
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
ELF+ + E + SHVT++ LSA + + L GR + S++ ++ +++ L ++++MY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 281 SKCGSIESALAVFKA-------------------------------IANKKLGHWTAIIV 309
+KCGSIE A +F A + K + W A+I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 310 GLGMHGLADQALELFMEMR-RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI 368
+G ++AL +F E++ + MK + IT + L+AC+ G ++ G + I ++ I
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGI 396
Query: 369 VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
L+ + + G L++++ + S+ R + +W +++ HG
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMHG 445
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M + +V+WN +IS Y N + N+AL++F ++ L ++ + TL + C+++ A++
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ IH Y+ K G + V S+L++MY+K G++ +R+VF+ + RDV W+++I G A
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV----- 170
+G A+ +F +M + T+T + + G V+ A +F QM +
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 171 SWNAMINGYMKSGKINLARQLFGQMP 196
+ +++ +SG + A + MP
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMP 529
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/621 (39%), Positives = 373/621 (60%), Gaps = 18/621 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ +P + WN II Y N+ DALL++ M + PD FT P ++K CS L +Q G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFD--KMVDRDVVSWNSLIDGYA 118
+ +H V ++GF D FVQ+ L+ +YAK +G AR VF+ + +R +VSW +++ YA
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 119 RNGNVEVAMKLFDEMPSRDAFT-WTAL---LDGLAKCGKVEAAREVFDQMPKKSS----- 169
+NG A+++F +M D W AL L+ ++ R + + K
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 170 --VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+S N M Y K G++ A+ LF +M NLI WN+MISGY NG EA+++F ++
Sbjct: 259 LLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P ++I SA+SA + + L R ++ ++ + + D + ++LI+M++KCGS+E
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A VF ++ + W+A+IVG G+HG A +A+ L+ M R G+ P+ +TF+G+L AC+
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
H G+V EG F+ M ++KI P +HY C++D+L RAGHL QA +I+ MP++P +W
Sbjct: 436 HSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+LLS+ + H ++E+GEYAA L DP TG Y LSN+YAAA WD+V+ VR MKE+
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXX 527
G+ KD GCS VE RG+L F VGDKSHP+ + I ++ + +LK G V + L
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL-HD 613
Query: 528 XXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREII 587
R+AI++GL++ + TP+RI KNLR C +CHA TKL+S + REI+
Sbjct: 614 LNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIV 673
Query: 588 VRDNSRFHHFKNGTCSCNDFW 608
VRD +RFHHFK+G CSC D+W
Sbjct: 674 VRDTNRFHHFKDGVCSCGDYW 694
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 195/369 (52%), Gaps = 14/369 (3%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQIH +L +G F F+ + L++ + +G++ AR+VFD + + WN++I GY+RN
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSW 172
+ + A+ ++ M S D+FT+ LL + ++ R V Q+ +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 173 NAMINGYMKSGKINLARQLFG--QMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N +I Y K ++ AR +F +P R ++SW +++S Y NG +EA+E+F + K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P V ++S L+A + L L GR IH+ +VK +++ L SL MY+KCG + +A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F + + L W A+I G +G A +A+++F EM ++P I+ ++AC+ G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 351 LVDEGNKCFDMM-INEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
+++ ++ + ++Y+ V L+D+ + G ++ A+ + + R + V+W +
Sbjct: 338 SLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSA 394
Query: 410 LLSSSRNHG 418
++ HG
Sbjct: 395 MIVGYGLHG 403
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 8/276 (2%)
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+I+ G I ARQ+F +P + WN++I GY N F +A+ ++ + + P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
T L A SGL+ L GR++H+ + + FD D + LI +Y+KC + SA VF+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 295 A--IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
+ + + WTAI+ +G +ALE+F +MR++ +KP + + VLNA + +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 353 DEGNKCFDMMIN-EYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+G ++ +I P + L + + G + AK + + M PN ++W +++
Sbjct: 239 KQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Query: 412 SSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLS 445
S +G H +I D PD + +S
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 368/608 (60%), Gaps = 9/608 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + VSWN ++S YV N + +A +LF+ + L+ + C++ G + + E
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEA 238
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q + D ++++ YA+ G++ AR++FD+ +DV +W +++ GY +N
Sbjct: 239 RQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYM 180
VE A +LFD+MP R+ +W A+L G + ++E A+E+FD MP ++ +WN MI GY
Sbjct: 295 RMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
+ GKI+ A+ LF +MP R+ +SW +MI+GY +G EA+ LF + +EG + + S
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
ALS + + L G+ +H +VK ++ +G +L+ MY KCGSIE A +FK +A K
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
+ W +I G HG + AL F M+R G+KP T + VL+ACSH GLVD+G + F
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
M +Y ++P +HY C+VD+L RAG L+ A N++++MP P+ IW +LL +SR HGN
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 421 EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEH 480
E+ E AA + +P+ +G Y LLSN+YA++G+W V +R M+++GV K G S +E
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 481 RGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXX 540
+ K + F VGD+ HP+ I+A L E+ ++K AG+V TS VL
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL-HDVEEEEKERMVRYH 713
Query: 541 XXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNG 600
RLA+++G++ + PIR++KNLRVC DCH K ++ I GR II+RDN+RFHHFK+G
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 601 TCSCNDFW 608
+CSC D+W
Sbjct: 774 SCSCGDYW 781
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 214/474 (45%), Gaps = 105/474 (22%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN+ IS Y+ R N+AL +F++M R +V I GY+
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM-------------------PRWSSVSYNGMISGYLR 107
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
GE LARK+FD+M +RD+VSWN +I GY RN N+ A +
Sbjct: 108 N--------------------GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 147
Query: 129 LFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMIN----------- 177
LF+ MP RD +W +L G A+ G V+ AR VFD+MP+K+ VSWNA+++
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
Query: 178 --------------------GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFL 217
G++K KI ARQ F M R+++SWN++I+GY +G+
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 218 EAMELF------EVLLKEGLMPSHVT------------ILSALSAVSGLAVL-GNGRWIH 258
EA +LF +V ++ ++ + + VS A+L G +
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 259 SFMVKHCFDLDGVLGTS----LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMH 314
M K FD+ S +I Y++CG I A +F + + W A+I G
Sbjct: 328 MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 315 GLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEH 374
G + +AL LF++M R G + + +F L+ C+ ++ G + ++V
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYE 441
Query: 375 YGCLVD-----ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
GC V + C+ G +++A ++ + M + + V W ++++ HG E+
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 165/339 (48%), Gaps = 35/339 (10%)
Query: 104 DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ 163
D D+ WN I Y R G A+++F MP + ++ ++ G + G+ E AR++FD+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 164 MPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
MP++ VSWN MI GY+++ + AR+LF MP R++ SWN+M+SGY NG +A +F
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 224 EVLLKEGLMPSHVTILSAL---SAVSGLAVLGNGRWIHSFMVKHC--------------- 265
+ + ++ + S +LSA S + +L R + + +C
Sbjct: 181 DRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 266 --FD----LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
FD D V ++I Y++ G I+ A +F + + WTA++ G + + ++
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
A ELF +M + + +++ +L ++ + FD+M V + ++
Sbjct: 300 ARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM-----PCRNVSTWNTMI 350
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ G + +AKN+ + MP R + V W ++++ G
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSG 388
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/606 (39%), Positives = 347/606 (57%), Gaps = 62/606 (10%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P WNL+I + + +LLL+++ML + +T P ++K CS L A +E Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
IH + K+G+ + DV + NSLI+ YA GN
Sbjct: 137 IHAQITKLGY-------------------------------ENDVYAVNSLINSYAVTGN 165
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKS 182
++A L FD++P+ VSWN++I GY+K+
Sbjct: 166 FKLAHLL-------------------------------FDRIPEPDDVSWNSVIKGYVKA 194
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
GK+++A LF +M +N ISW +MISGY EA++LF + + P +V++ +AL
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
SA + L L G+WIHS++ K +D VLG LI+MY+KCG +E AL VFK I K +
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 303 HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM 362
WTA+I G HG +A+ FMEM+++G+KP+ ITF VL ACS+ GLV+EG F M
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 363 INEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEI 422
+Y + PT+EHYGC+VD+L RAG L +AK I+ MP++PN VIW +LL + R H N+E+
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 423 GEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRG 482
GE LI DP G Y +NI+A KWDK + R +MKE+GV K GCS + G
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEG 494
Query: 483 KLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXX 542
+ F+ GD+SHP+ + I +K R M +KL+ G+VP+ ++L
Sbjct: 495 TTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSE 554
Query: 543 RLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTC 602
+LAI++GL+ + T IRIMKNLRVC DCH VTKL+S IY R+I++RD +RFHHF++G C
Sbjct: 555 KLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKC 614
Query: 603 SCNDFW 608
SC D+W
Sbjct: 615 SCGDYW 620
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 128/245 (52%), Gaps = 12/245 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +SW +IS YV + +AL LF +M + D+ PD +L + C++L A+++G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K IH Y+ K D + L++MYAK GEM A +VF + + V +W +LI GYA +
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
G+ A+ F EM + T+TA+L + G VE + +F M + ++
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+ +++ ++G ++ A++ +MP + N + W +++ +++ E+ E+L+
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI--A 444
Query: 231 LMPSH 235
+ P H
Sbjct: 445 IDPYH 449
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 157 AREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQM----PGRNLISWNSMISGYQL 212
A+ VFD + + WN MI G+ S + + L+ +M N ++ S++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 213 NGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL 272
F E ++ + K G + + S ++ AV GN + H + + D V
Sbjct: 128 LSAFEETTQIHAQITKLGY---ENDVYAVNSLINSYAVTGNFKLAH-LLFDRIPEPDDVS 183
Query: 273 GTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
S+I+ Y K G ++ AL +F+ +A K WT +I G + +AL+LF EM+ +
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI-VPTVEHYGC-LVDILCRAGHLQQ 390
+P ++ L+AC+ G +++G K +N+ +I + +V GC L+D+ + G +++
Sbjct: 244 EPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEE 300
Query: 391 AKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
A + +++ + + W +L+S HG+
Sbjct: 301 ALEVFKNIKKKSVQA-WTALISGYAYHGH 328
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/650 (37%), Positives = 370/650 (56%), Gaps = 46/650 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + +N + + +L ++++ H D F+ ++K S++ A+ EG ++
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
HG KI D FV++ ++MYA G + AR VFD+M RDVV+WN++I+ Y R G V
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 124 EVAMKLFDEMPSR---------------------------------------DAFTWTAL 144
+ A KLF+EM D TAL
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 145 LDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWN 204
+ A G ++ ARE F +M ++ AM++GY K G+++ A+ +F Q ++L+ W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH 264
+MIS Y + EA+ +FE + G+ P V++ S +SA + L +L +W+HS + +
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 265 CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELF 324
+ + + +LI MY+KCG +++ VF+ + + + W+++I L MHG A AL LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
M++ ++P+ +TF+GVL CSH GLV+EG K F M +EY I P +EHYGC+VD+ R
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLL 444
A L++A +IESMP+ N VIW SL+S+ R HG LE+G++AA ++E +PD G L+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLM 553
Query: 445 SNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKL 504
SNIYA +W+ V ++R +M+E+ V K+ G S ++ GK + F++GDK H Q+ IYAKL
Sbjct: 554 SNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Query: 505 REMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTP------ 558
E+ KLKLAG+VPD VL +LA+ FGL+N E+
Sbjct: 614 DEVVSKLKLAGYVPDCGSVL-VDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 559 IRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
IRI+KNLRVC DCH KL+S +Y REIIVRD +RFH +KNG CSC D+W
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 10/225 (4%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
K LV W +IS YV + +AL +F +M + PD ++ VI C+ L + + K
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+H + G + + ++L+NMYAK G + R VF+KM R+VVSW+S+I+ + +G
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 122 NVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----W 172
A+ LF M + T+ +L G + G VE +++F M + +++ +
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY 484
Query: 173 NAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRF 216
M++ + ++ + A ++ MP N++ W S++S +++G
Sbjct: 485 GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/616 (39%), Positives = 367/616 (59%), Gaps = 10/616 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + LVSWN I++ Y N + AL + + M +L P T+ V+ S L + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IHGY ++ GF + ++LV+MYAK G + AR++FD M++R+VVSWNS+ID Y +N
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 121 GNVEVAM----KLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFD---QMPKKSSVSW- 172
N + AM K+ DE + L A G +E R + ++ +VS
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N++I+ Y K +++ A +FG++ R L+SWN+MI G+ NGR ++A+ F + +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P T +S ++A++ L++ + +WIH +++ C D + + T+L++MY+KCG+I A +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F ++ + + W A+I G G HG ALELF EM++ +KP+ +TF+ V++ACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+ G KCF MM Y I +++HYG +VD+L RAG L +A + I MP++P ++ ++L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 413 SSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
+ + H N+ E AA L E +PD G + LL+NIY AA W+KV VR M +G+ K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 473 AGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXX 532
GCS+VE + +++ F G +HP +K IYA L ++ +K AG+VPDT+ VL
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL--GVENDV 733
Query: 533 XXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNS 592
+LAISFGLLN T I + KNLRVC DCH TK +S + GREI+VRD
Sbjct: 734 KEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 593 RFHHFKNGTCSCNDFW 608
RFHHFKNG CSC D+W
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 199/367 (54%), Gaps = 10/367 (2%)
Query: 53 RLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNS 112
R +++E +QI V K G + F Q+ LV+++ ++G + A +VF+ + + V +++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 113 LIDGYARNGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKS 168
++ G+A+ +++ A++ F M D + +T LL ++ +E+ + K
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 169 -SVSWNAMI---NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFE 224
S+ AM N Y K ++N AR++F +MP R+L+SWN++++GY NG A+E+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
+ +E L PS +TI+S L AVS L ++ G+ IH + ++ FD + T+L++MY+KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
S+E+A +F + + + W ++I + +A+ +F +M G+KP ++ +G L+
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
AC+ G ++ G + + E + V L+ + C+ + A ++ + R
Sbjct: 346 ACADLGDLERGRFIHKLSV-ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-TL 403
Query: 405 VIWMSLL 411
V W +++
Sbjct: 404 VSWNAMI 410
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 371/625 (59%), Gaps = 23/625 (3%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LV+WN ++S N + +AL R+M+ + PD FT+ V+ CS L ++ GK++H
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 66 YVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
Y LK G + FV S+LV+MY ++ R+VFD M DR + WN++I GY++N + +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 125 VAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAM 175
A+ LF M ++ T ++ + G + + K+ N +
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGR------FLEAMELFEVLLKE 229
++ Y + GKI++A ++FG+M R+L++WN+MI+GY + L M+ E + +
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 230 G-----LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
G L P+ +T+++ L + + L+ L G+ IH++ +K+ D +G++L++MY+KCG
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
++ + VF I K + W II+ GMHG +A++L M G+KP+ +TFI V
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
ACSH G+VDEG + F +M +Y + P+ +HY C+VD+L RAG +++A ++ MP NK
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 686
Query: 405 V-IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREM 463
W SLL +SR H NLEIGE AA NLI+ +P+ Y LL+NIY++AG WDK + VR
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 464 MKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQV 523
MKE+GV K+ GCS +EH ++++F+ GD SHPQ++ + L + ++++ G+VPDTS V
Sbjct: 747 MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Query: 524 LXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYG 583
L +LAI+FG+LN T IR+ KNLRVCNDCH TK +S I
Sbjct: 807 L-HNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865
Query: 584 REIIVRDNSRFHHFKNGTCSCNDFW 608
REII+RD RFH FKNGTCSC D+W
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 212/421 (50%), Gaps = 23/421 (5%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
W ++ V ++ +A+L + M+ + PD + P ++K + L ++ GKQIH +V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 69 KIGFGFDKF-VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K G+G D V ++LVN+Y K G+ G KVFD++ +R+ VSWNSLI E+A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 128 KLF----DEMPSRDAFTWTALLDGLAKCGKVEA---AREVFDQMPKK---SSVSWNAMIN 177
+ F DE +FT +++ + E ++V +K +S N ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K GK+ ++ L G GR+L++WN+++S N + LEA+E ++ EG+ P T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
I S L A S L +L G+ +H++ +K+ D + +G++L++MY C + S VF +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRR-IGMKPHAITFIGVLNACSHKGLVDEG 355
++K+G W A+I G + +AL LF+ M G+ ++ T GV+ AC G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 356 NKCFDMMI----NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
++ + + V L+D+ R G + A I M R + V W +++
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNT-----LMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Query: 412 S 412
+
Sbjct: 479 T 479
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 210/438 (47%), Gaps = 29/438 (6%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRL---HAVQEGKQI 63
VSWN +IS + AL FR ML ++ P FTL V+ CS L + GKQ+
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H Y L+ G + F+ ++LV MY K G++ ++ + RD+V+WN+++ +N +
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 124 EVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----A 174
A++ EM D FT +++L + + +E+ K S+ N A
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE--GLM 232
+++ Y ++ R++F M R + WN+MI+GY N EA+ LF + ++E GL+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF-IGMEESAGLL 402
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
+ T+ + A IH F+VK D D + +L++MYS+ G I+ A+ +
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR-----------RIGMKPHAITFIG 341
F + ++ L W +I G + AL L +M+ R+ +KP++IT +
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
+L +C+ + +G + I + V LVD+ + G LQ ++ + + +P +
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 402 PNKVIWMSLLSSSRNHGN 419
N + W ++ + HGN
Sbjct: 582 -NVITWNVIIMAYGMHGN 598
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 31/275 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD-----------LLPDGFTLPCVIK 49
M LV+WN +I+ YV + DALLL +M + + L P+ TL ++
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 50 GCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVS 109
C+ L A+ +GK+IH Y +K D V S+LV+MYAK G + ++RKVFD++ ++V++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 110 WNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVF---- 161
WN +I Y +GN + A+ L M + + T+ ++ + G V+ +F
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 162 -DQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI---SWNSMISGYQLNGRF- 216
D + SS + +++ ++G+I A QL MP R+ +W+S++ +++
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP-RDFNKAGAWSSLLGASRIHNNLE 704
Query: 217 ---LEAMELFEVLLKEGLMPSHVTILSALSAVSGL 248
+ A L ++ E + SH +L+ + + +GL
Sbjct: 705 IGEIAAQNLIQL---EPNVASHYVLLANIYSSAGL 736
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 380/649 (58%), Gaps = 42/649 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDAL-LLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M + +VSW +I Y + DA+ L FR + ++ P+ T+ CVI C++L ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G++++ ++ G + + S+LV+MY K + +A+++FD+ ++ N++ Y R
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 120 NGNVEVAMKLFDEM------PSRDAF-----------------------------TW--- 141
G A+ +F+ M P R + +W
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 142 -TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
AL+D KC + + A +FD+M K+ V+WN+++ GY+++G+++ A + F MP +N+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 201 ISWNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+SWN++ISG F EA+E+F + +EG+ VT++S SA L L +WI+
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
++ K+ LD LGT+L++M+S+CG ESA+++F ++ N+ + WTA I + M G A++
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
A+ELF +M G+KP + F+G L ACSH GLV +G + F M+ + + P HYGC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG 439
D+L RAG L++A +IE MPM PN VIW SLL++ R GN+E+ YAA + P+ TG
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKA 499
Y LLSN+YA+AG+W+ ++ VR MKE+G+ K G S ++ RGK + F GD+SHP+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 500 IYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPI 559
I A L E+S++ GHVPD S VL +LA+++GL++ + T I
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVL-MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 560 RIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
RI+KNLRVC+DCH+ K S +Y REII+RDN+RFH+ + G CSC DFW
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 224/439 (51%), Gaps = 44/439 (10%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
T +N +I Y + N+A+LLF +M++ + PD +T P + C++ A G QIH
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G ++K+G+ D FVQ+SLV+ YA+ GE+ ARKVFD+M +R+VVSW S+I GYAR +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 125 VAMKLF-----DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----A 174
A+ LF DE + ++ T ++ AK +E +V+ + S + N A
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSA 276
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ YMK I++A++LF + NL N+M S Y G EA+ +F +++ G+ P
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC----------- 283
+++LSA+S+ S L + G+ H +++++ F+ + +LI+MY KC
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 284 --------------------GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
G +++A F+ + K + W II GL L ++A+E+
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 324 FMEMR-RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDIL 382
F M+ + G+ +T + + +AC H G +D K I + I V LVD+
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 383 CRAGHLQQAKNIIESMPMR 401
R G + A +I S+ R
Sbjct: 516 SRCGDPESAMSIFNSLTNR 534
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/623 (39%), Positives = 369/623 (59%), Gaps = 18/623 (2%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
K + SWN +I+ + S +ALL F M L P + PC IK CS L + GKQ
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
H G+ D FV S+L+ MY+ G++ ARKVFD++ R++VSW S+I GY NGN
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 123 VEVAMKLF-----DEMPSRDAFTWTA--LLDGLAKCGKVEAA-------REVFDQMPKKS 168
A+ LF DE DA + L+ ++ C +V A V + +
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 169 SVSWNAMINGYMKSGK--INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
N +++ Y K G+ + +AR++F Q+ ++ +S+NS++S Y +G EA E+F L
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 227 LKEGLMP-SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+K ++ + +T+ + L AVS L G+ IH +++ + D ++GTS+I+MY KCG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+E+A F + NK + WTA+I G GMHG A +ALELF M G++P+ ITF+ VL A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
CSH GL EG + F+ M + + P +EHYGC+VD+L RAG LQ+A ++I+ M M+P+ +
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI 457
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
IW SLL++ R H N+E+ E + L E D G Y LLS+IYA AG+W V VR +MK
Sbjct: 458 IWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMK 517
Query: 466 ERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLX 525
RG++K G S++E G+++ F++GD+ HPQ + IY L E+++KL AG+V +TS V
Sbjct: 518 NRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC- 576
Query: 526 XXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGRE 585
+LAI+FG++N + + ++KNLRVC+DCH V KL+S I RE
Sbjct: 577 HDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDRE 636
Query: 586 IIVRDNSRFHHFKNGTCSCNDFW 608
+VRD RFHHFK+G CSC D+W
Sbjct: 637 FVVRDAKRFHHFKDGGCSCGDYW 659
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/648 (36%), Positives = 379/648 (58%), Gaps = 42/648 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDAL-LLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M + +VSW +I Y + DA+ L FR + ++ P+ T+ CVI C++L ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G++++ ++ G + + S+LV+MY K + +A+++FD+ ++ N++ Y R
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 120 NGNVEVAMKLFDEM------PSRDAF-----------------------------TW--- 141
G A+ +F+ M P R + +W
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 142 -TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
AL+D KC + + A +FD+M K+ V+WN+++ GY+++G+++ A + F MP +N+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 201 ISWNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+SWN++ISG F EA+E+F + +EG+ VT++S SA L L +WI+
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
++ K+ LD LGT+L++M+S+CG ESA+++F ++ N+ + WTA I + M G A++
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
A+ELF +M G+KP + F+G L ACSH GLV +G + F M+ + + P HYGC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG 439
D+L RAG L++A +IE MPM PN VIW SLL++ R GN+E+ YAA + P+ TG
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKA 499
Y LLSN+YA+AG+W+ ++ VR MKE+G+ K G S ++ RGK + F GD+SHP+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 500 IYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPI 559
I A L E+S++ GHVPD S VL +LA+++GL++ + T I
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVL-MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 560 RIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDF 607
RI+KNLRVC+DCH+ K S +Y REII+RDN+RFH+ + G CSC DF
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 224/439 (51%), Gaps = 44/439 (10%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
T +N +I Y + N+A+LLF +M++ + PD +T P + C++ A G QIH
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G ++K+G+ D FVQ+SLV+ YA+ GE+ ARKVFD+M +R+VVSW S+I GYAR +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 125 VAMKLF-----DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----A 174
A+ LF DE + ++ T ++ AK +E +V+ + S + N A
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSA 276
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ YMK I++A++LF + NL N+M S Y G EA+ +F +++ G+ P
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC----------- 283
+++LSA+S+ S L + G+ H +++++ F+ + +LI+MY KC
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 284 --------------------GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
G +++A F+ + K + W II GL L ++A+E+
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 324 FMEMR-RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDIL 382
F M+ + G+ +T + + +AC H G +D K I + I V LVD+
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 383 CRAGHLQQAKNIIESMPMR 401
R G + A +I S+ R
Sbjct: 516 SRCGDPESAMSIFNSLTNR 534
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/678 (35%), Positives = 369/678 (54%), Gaps = 77/678 (11%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK--QIH 64
V +N +I+ + HN+ A+ LF +M H PD FT V+ G + L A E + Q H
Sbjct: 114 VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFH 172
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGE----MGLARKVFDKMVDRDVVSW---------- 110
LK G G+ V ++LV++Y+K + ARKVFD+++++D SW
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 111 ----------------------NSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTAL 144
N++I GY G + A+++ M S D FT+ ++
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 145 LDGLA----------------------------------KCGKVEAAREVFDQMPKKSSV 170
+ A KCGK + AR +F++MP K V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
SWNA+++GY+ SG I A+ +F +M +N++SW MISG NG E ++LF + +EG
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P A+ + + L NG+ H+ ++K FD G +LI MY+KCG +E A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF+ + W A+I LG HG +A++++ EM + G++P IT + VL ACSH G
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LVD+G K FD M Y+I P +HY L+D+LCR+G A+++IES+P +P IW +L
Sbjct: 533 LVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
LS R HGN+E+G AA L P+ G Y LLSN++AA G+W++V+ VR++M++RGV
Sbjct: 593 LSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K+ CS +E +++ F+V D SHP+ +A+Y L+++ K+++ G+VPDTS VL
Sbjct: 653 KEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
++A++FGL+ + T IRI KNLR C DCH + LS + R+II+RD
Sbjct: 713 GHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRD 772
Query: 591 NSRFHHFKNGTCSCNDFW 608
RFHHF+NG CSC +FW
Sbjct: 773 RKRFHHFRNGECSCGNFW 790
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 48/354 (13%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LV++N +IS YV+ +AL + R+M+ + D FT P VI+ C+ +Q GKQ+H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 66 YVLK---IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
YVL+ F FD +SLV++Y K G+ AR +F+KM +D+VSWN+L+ GY +G+
Sbjct: 311 YVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK--------------- 167
+ A +F EM ++ +W ++ GLA+ G E ++F M ++
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 168 -----------------------SSVSW-NAMINGYMKSGKINLARQLFGQMPGRNLISW 203
SS+S NA+I Y K G + ARQ+F MP + +SW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR-WIHSFMV 262
N++I+ +G EA++++E +LK+G+ P +T+L+ L+A S ++ GR + S
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 263 KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAIIVGLGMHG 315
+ LI++ + G A +V +++ K W A++ G +HG
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 198/476 (41%), Gaps = 112/476 (23%)
Query: 53 RLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNS 112
R ++Q + +HG ++ GF + + L+++Y K E+ AR++FD++ + D ++ +
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 113 LIDGYARNGNVEVAMKLFDEMP-------------------------------------S 135
++ GY +G++ +A +F++ P
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 136 RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-----NAMINGYMKSGK----IN 186
D FT+ ++L GLA E F KS + NA+++ Y K ++
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 187 LARQLFGQMPGRN--------------------------------LISWNSMISGYQLNG 214
AR++F ++ ++ L+++N+MISGY G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
+ EA+E+ ++ G+ T S + A + +L G+ +H+++++ D
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDN 324
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAI--------------------------- 307
SL+ +Y KCG + A A+F+ + K L W A+
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 308 ----IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
I GL +G ++ L+LF M+R G +P F G + +C+ G G + + +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHAQL 443
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
+ ++ L+ + + G +++A+ + +MP + V W +L+++ HG+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGH 498
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 50/323 (15%)
Query: 144 LLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP--GRNLI 201
L+D K ++ AR++FD++ + ++ M++GY SG I LAR +F + P R+ +
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR----WI 257
+N+MI+G+ N A+ LF + EG P + T S L +GLA++ +
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQF 171
Query: 258 HSFMVKHCFDLDGVLGTSLIEMYSKCGS----IESALAVFKAIANKKLGHWTAIIVGLGM 313
H+ +K + +L+ +YSKC S + SA VF I K WT ++ G
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 314 HGLAD--------------------------------QALELFMEMRRIGMKPHAITFIG 341
+G D +ALE+ M G++ T+
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
V+ AC+ GL+ G + ++ + LV + + G +A+ I E MP +
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 402 PNKVIWMSLLSSSRNHGNLEIGE 424
+ V W +LLS + G+ IGE
Sbjct: 350 -DLVSWNALLSGYVSSGH--IGE 369
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SW ++IS N + L LF M P + IK C+ L A G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q H +LKIGF ++L+ MYAK G + AR+VF M D VSWN+LI ++
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA-- 174
G+ A+ +++EM + D T +L + G V+ R+ FD M + A
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 175 ---MINGYMKSGKINLARQLFGQMPGRNLIS-WNSMISGYQLNGR----FLEAMELFEVL 226
+I+ +SGK + A + +P + W +++SG +++G + A +LF
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--- 613
Query: 227 LKEGLMPSH---VTILSALSAVSG 247
GL+P H +LS + A +G
Sbjct: 614 ---GLIPEHDGTYMLLSNMHAATG 634
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/615 (37%), Positives = 364/615 (59%), Gaps = 21/615 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD-----LLPDGFTLPCVIKGCSRLH 55
M + +VSW ++ YVHN + + A LF +M + ++ GF I +L+
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
+ K D ++S+++ K G + AR++FD+M +R V++W +++
Sbjct: 165 EMIPDK-------------DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVT 211
Query: 116 GYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAM 175
GY +N V+ A K+FD MP + +WT++L G + G++E A E+F+ MP K ++ NAM
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAM 271
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
I+G + G+I AR++F M RN SW ++I ++ NG LEA++LF ++ K+G+ P+
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T++S LS + LA L +G+ +H+ +V+ FD+D + + L+ MY KCG + + +F
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDE 354
+K + W +II G HGL ++AL++F EM G KP+ +TF+ L+ACS+ G+V+E
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G K ++ M + + + P HY C+VD+L RAG +A +I+SM + P+ +W SLL +
Sbjct: 452 GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
R H L++ E+ A LIE +P+ +G Y LLSN+YA+ G+W V+ +R++MK R V K G
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 475 CSIVEHRGKLNRFIVGD-KSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXX 533
CS E K++ F G SHP+ ++I L E+ L+ AG+ PD S L
Sbjct: 572 CSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL-HDVDEEEK 630
Query: 534 XXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSR 593
RLA+++ LL + PIR+MKNLRVC+DCH K++S + REII+RD +R
Sbjct: 631 VNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANR 690
Query: 594 FHHFKNGTCSCNDFW 608
FHHF+NG CSC D+W
Sbjct: 691 FHHFRNGECSCKDYW 705
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 194/395 (49%), Gaps = 61/395 (15%)
Query: 87 AKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLD 146
++ G++ ARK+FD + + SWNS++ GY N A KLFDEMP R+ +W L+
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 147 GLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
G K G+++ AR+VFD MP+++ VSW A++ GY+ +GK+++A LF +MP +N +SW M
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVM 147
Query: 207 ISGYQLNGRFLEAMELFEV---------------LLKEGLMPSHVTILSALSAVSGLA-- 249
+ G+ +GR +A +L+E+ L KEG + I +S S +
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 250 --VLGNGRWIHSFMVKHCFDL----DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH 303
V G G+ + FD+ V TS++ Y + G IE A +F+ + K +
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 304 WTAIIVGLGM-------------------------------HGLADQALELFMEMRRIGM 332
A+I GLG +G +AL+LF+ M++ G+
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMIN-EYKIVPTVEHYGCLVDILCRAGHLQQA 391
+P T I +L+ C+ + G + ++ ++ + V L+ + + G L ++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKS 385
Query: 392 KNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYA 426
K I + P + + ++W S++S +HG +GE A
Sbjct: 386 KLIFDRFPSK-DIIMWNSIISGYASHG---LGEEA 416
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 148 LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMI 207
L++ GK+ AR++FD KS SWN+M+ GY + AR+LF +MP RN+ISWN ++
Sbjct: 27 LSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLV 86
Query: 208 SGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD 267
SGY NG EA ++F+ LMP ++S + V G G S K +
Sbjct: 87 SGYMKNGEIDEARKVFD------LMPER-NVVSWTALVKGYVHNGKVDVAESLFWKMP-E 138
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
+ V T ++ + + G I+ A +++ I +K T++I GL G D+A E+F EM
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 328 RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGH 387
+ IT+ ++ VD+ K FD+M + ++ T G + + G
Sbjct: 199 S----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV-----QNGR 249
Query: 388 LQQAKNIIESMPMRP 402
++ A+ + E MP++P
Sbjct: 250 IEDAEELFEVMPVKP 264
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N I + GKI+ AR+LF +++ SWNSM++GY N +A +LF+ M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDE------M 74
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL----DGVLGTSLIEMYSKCGSIES 288
P I+S VSG + NG + + FDL + V T+L++ Y G ++
Sbjct: 75 PDR-NIISWNGLVSGY--MKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHA--ITFIGVLNAC 346
A ++F + K WT +++G G D A +L+ M P I +++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY------EMIPDKDNIARTSMIHGL 182
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPT--VEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
+G VDE + FD M I T V YG + + A+ I + MP + +
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYG-------QNNRVDDARKIFDVMPEK-TE 234
Query: 405 VIWMSLLSSSRNHGNLEIGEYAAHNLIEADP--DATGCYTLLSNIYAAAGKWDKVSHVRE 462
V W S+L +G +E A L E P C ++S + G+ K V +
Sbjct: 235 VSWTSMLMGYVQNGRIE----DAEELFEVMPVKPVIACNAMISGL-GQKGEIAKARRVFD 289
Query: 463 MMKER 467
MKER
Sbjct: 290 SMKER 294
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/617 (39%), Positives = 359/617 (58%), Gaps = 27/617 (4%)
Query: 8 SWNLIISCYVHNHRSNDALLL---FRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
SWN +IS Y + + +AL L R M D T+ ++ C+ G IH
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
Y +K G + FV + L+++YA++G + +KVFD+M RD++SWNS+I Y N
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 125 VAMKLFDEMP-SR---DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-------- 172
A+ LF EM SR D T +L L++ G + A R V +K W
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG---WFLEDITIG 387
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG-L 231
NA++ Y K G ++ AR +F +P ++ISWN++ISGY NG EA+E++ ++ +EG +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+ T +S L A S L G +H ++K+ LD + TSL +MY KCG +E AL+
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
+F I W +I G HG ++A+ LF EM G+KP ITF+ +L+ACSH GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
VDEG CF+MM +Y I P+++HYGC+VD+ RAG L+ A I+SM ++P+ IW +LL
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
S+ R HGN+++G+ A+ +L E +P+ G + LLSN+YA+AGKW+ V +R + +G+ K
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXX 531
G S +E K+ F G+++HP + +Y +L + KLK+ G+VPD VL
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVL-QDVEDD 746
Query: 532 XXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDN 591
RLAI+F L+ +T IRI KNLRVC DCH+VTK +S I REIIVRD+
Sbjct: 747 EKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 806
Query: 592 SRFHHFKNGTCSCNDFW 608
+RFHHFKNG CSC D+W
Sbjct: 807 NRFHHFKNGVCSCGDYW 823
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 253/485 (52%), Gaps = 23/485 (4%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQ-MLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
+WNL+IS Y S++ + F ML L PD T P V+K C V +G +IH
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCL 175
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
LK GF +D +V +SL+++Y+++ +G AR +FD+M RD+ SWN++I GY ++GN + A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NAMINGYMKS 182
+ L + + + D+ T +LL + G + K S N +I+ Y +
Sbjct: 236 LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
G++ +++F +M R+LISWNS+I Y+LN + L A+ LF+ + + P +T++S
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIESALAVFKAIANKKL 301
S +S L + R + F ++ + L+ + +G +++ MY+K G ++SA AVF + N +
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDEGNKCFD 360
W II G +G A +A+E++ M G + + T++ VL ACS G + +G K
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 361 MMINE--YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
++ Y V V L D+ + G L+ A ++ +P R N V W +L++ HG
Sbjct: 476 RLLKNGLYLDVFVVTS---LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHG 531
Query: 419 NLEIGEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK-ERGV---LKD 472
+ E +++ PD TLLS + +G D+ EMM+ + G+ LK
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSAC-SHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 473 AGCSI 477
GC +
Sbjct: 591 YGCMV 595
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 175/338 (51%), Gaps = 28/338 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M+ L+SWN II Y N + A+ LF++M + PD TL + S+L ++
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 61 KQIHGYVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+ + G+ L+ G F D + +++V MYAK G + AR VF+ + + DV+SWN++I GYA+
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 120 NGNVEVAMKLFDEMPSRDAF-----TWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
NG A+++++ M TW ++L ++ G + ++ ++ K
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
++ + Y K G++ A LF Q+P N + WN++I+ + +G +A+ LF+ +L EG
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL---DGVLGTSL------IEMYS 281
+ P H+T ++ LSA S ++ G+W CF++ D + SL ++MY
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQW--------CFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 282 KCGSIESALAVFKAIA-NKKLGHWTAIIVGLGMHGLAD 318
+ G +E+AL K+++ W A++ +HG D
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 154/378 (40%), Gaps = 73/378 (19%)
Query: 78 VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFD------ 131
+ + LVN+Y G + LAR FD + +RDV +WN +I GY R GN ++ F
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 132 -------EMPSR------------------------DAFTWTALLDGLAKCGKVEAAREV 160
PS D + +L+ ++ V AR +
Sbjct: 148 GLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 161 FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
FD+MP + SWNAMI+GY +SG A L NG L AM
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLS--------------------NG--LRAM 245
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
+ VT++S LSA + G IHS+ +KH + + + LI++Y
Sbjct: 246 D-------------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 281 SKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
++ G + VF + + L W +II ++ +A+ LF EMR ++P +T I
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
+ + S G + + + + + +V + + G + A+ + +P
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP- 411
Query: 401 RPNKVIWMSLLSSSRNHG 418
+ + W +++S +G
Sbjct: 412 NTDVISWNTIISGYAQNG 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V WN +I+C+ + A++LF++ML + PD T ++ CS V EG+
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE- 576
Query: 67 VLKIGFGFDKFVQ--SSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYARNGNV 123
+++ +G ++ +V+MY + G++ A K M + D W +L+ +GNV
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 124 EV----AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREV 160
++ + LF+ P + L + A GK E E+
Sbjct: 637 DLGKIASEHLFEVEPEHVGYH-VLLSNMYASAGKWEGVDEI 676
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/625 (37%), Positives = 362/625 (57%), Gaps = 20/625 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+W L+I+ + +A+ F M+ D FTL V C+ L + G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKW---GEMGLARKVFDKMVDRDVVSWNSLIDGY 117
KQ+H + ++ G D V+ SLV+MYAK G + RKVFD+M D V+SW +LI GY
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 118 ARNGNVEV-AMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK---- 167
+N N+ A+ LF EM ++ + FT+++ ++V Q K+
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 168 -SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
SSV+ N++I+ ++KS ++ A++ F + +NL+S+N+ + G N F +A +L +
Sbjct: 407 NSSVA-NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
+ L S T S LS V+ + + G IHS +VK + + +LI MYSKCGSI
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
++A VF + N+ + WT++I G HG A + LE F +M G+KP+ +T++ +L+AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
SH GLV EG + F+ M ++KI P +EHY C+VD+LCRAG L A I +MP + + ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
W + L + R H N E+G+ AA ++E DP+ Y LSNIYA AGKW++ + +R MKE
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 467 RGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQV--- 523
R ++K+ GCS +E K+++F VGD +HP IY +L + ++K G+VPDT V
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHK 765
Query: 524 LXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYG 583
L ++A++FGL++ + P+R+ KNLRVC DCH K +S + G
Sbjct: 766 LEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSG 825
Query: 584 REIIVRDNSRFHHFKNGTCSCNDFW 608
REI++RD +RFHHFK+G CSCND+W
Sbjct: 826 REIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 210/484 (43%), Gaps = 56/484 (11%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVF 99
D T ++K C R + GK +H +++ D + +SL+++Y+K G+ A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 100 DKMV---DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCG 152
+ M RDVVSW++++ Y NG A+K+F E + + +TA++ +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 153 KVEAAREVFDQMPKKSSVSWN-----AMINGYMK-SGKINLARQLFGQMPGRNLISWNSM 206
V R + K + ++I+ ++K A ++F +M N+++W M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
I+ G EA+ F ++ G T+ S SA + L L G+ +HS+ ++
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 267 DLDGVLGTSLIEMYSKC---GSIESALAVFKAIANKKLGHWTAIIVGLGMH-GLADQALE 322
D + SL++MY+KC GS++ VF + + + WTA+I G + LA +A+
Sbjct: 301 VDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 323 LFMEMRRIG-MKPHAITFIGVLNACSH----------------KGLVDE---GNKCFDMM 362
LF EM G ++P+ TF AC + +GL N M
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 363 INEYKI-----------VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP---NKVIWM 408
+ ++ + Y +D CR + +QA ++ + R + +
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
SLLS N G++ GE +++ + C L+S +Y+ G D S V M+
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS-MYSKCGSIDTASRVFNFMEN 537
Query: 467 RGVL 470
R V+
Sbjct: 538 RNVI 541
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 219 AMELFEVLLKEGLMP-SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLI 277
A+ +++ ++G+ P VT S L + G+ +H+ +++ + D VL SLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 278 EMYSKCGSIESALAVFKAI---ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+YSK G A VF+ + + + W+A++ G +G A+++F+E +G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGC-LVDILCRA-GHLQQAK 392
+ + V+ ACS+ V G ++ V GC L+D+ + + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAY 223
Query: 393 NIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAG 452
+ + M N V W +++ G +++ + ++ +T LS++++A
Sbjct: 224 KVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK-FT-LSSVFSACA 280
Query: 453 KWDKVSHVREMMK---ERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMS 508
+ + +S +++ G++ D CS+V+ K + D S + ++ ++ + S
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCS----ADGSVDDCRKVFDRMEDHS 335
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/605 (38%), Positives = 358/605 (59%), Gaps = 63/605 (10%)
Query: 9 WNLIISCYVHNHRS---NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
WN+II VHN S + + ++ +M +H + PD T P ++ + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+L G D FV++SL+NMY+ G++ A++VFD +D+ +WNS+++ YA+ G ++
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 126 AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKI 185
A KLFDEMP R+ +W+ L++G CGK + A ++F +M
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM--------------------- 185
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
Q+P N E F + P+ T+ + LSA
Sbjct: 186 --------QLPKPN---------------------EAF-------VRPNEFTMSTVLSAC 209
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK-LGHW 304
L L G+W+H+++ K+ ++D VLGT+LI+MY+KCGS+E A VF A+ +KK + +
Sbjct: 210 GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAY 269
Query: 305 TAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
+A+I L M+GL D+ +LF EM + P+++TF+G+L AC H+GL++EG F MMI
Sbjct: 270 SAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
E+ I P+++HYGC+VD+ R+G +++A++ I SMPM P+ +IW SLLS SR G+++
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTC 389
Query: 424 EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGK 483
E A LIE DP +G Y LLSN+YA G+W +V +R M+ +G+ K GCS VE G
Sbjct: 390 EGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGV 449
Query: 484 LNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXR 543
++ F+VGD+S +++ IYA L E+ ++L+ AG+V DT +VL +
Sbjct: 450 VHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVL-LDLNEKDKEIALSYHSEK 508
Query: 544 LAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCS 603
LAI+F L+ TP+RI+KNLR+C DCH V K++S ++ REI+VRD +RFHHF++G+CS
Sbjct: 509 LAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCS 568
Query: 604 CNDFW 608
C DFW
Sbjct: 569 CRDFW 573
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 147/299 (49%), Gaps = 26/299 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQML-----HHDLLPDGFTLPCVIKGCSRLH 55
M + ++SW+ +I+ YV + +AL LFR+M + P+ FT+ V+ C RL
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLI 114
A+++GK +H Y+ K D + ++L++MYAK G + A++VF+ + +DV +++++I
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 115 DGYARNGNVEVAMKLFDEMPSRD-----AFTWTALLDGLAKCGKVEAAREVFDQMPKKSS 169
A G + +LF EM + D + T+ +L G + + F M ++
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 170 VS-----WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELF 223
++ + M++ Y +SG I A MP +++ W S++SG ++ G
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG---VLGTSLIEM 279
+ L++ M S +L LS V GRW+ ++H ++ G V G S +E+
Sbjct: 394 KRLIELDPMNSGAYVL--LSNVYA----KTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/612 (37%), Positives = 360/612 (58%), Gaps = 11/612 (1%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V WN+++ Y ++ +FRQM +++P+ +T P ++K C RL ++ G+QIH
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++K F + +V S L++MYAK G++ A + + +DVVSW ++I GY + +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 126 AMKLFDEMPSRDAFT-WTALLDGLAKCGKVEAAREVFDQMPKKSSVS--------WNAMI 176
A+ F +M R + L + ++ C ++A +E Q+ ++ VS NA++
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALV 633
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
Y + GKI + F Q + I+WN+++SG+Q +G EA+ +F + +EG+ ++
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T SA+ A S A + G+ +H+ + K +D + + +LI MY+KCGSI A F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ K W AII HG +AL+ F +M ++P+ +T +GVL+ACSH GLVD+G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
F+ M +EY + P EHY C+VD+L RAG L +AK I+ MP++P+ ++W +LLS+
Sbjct: 814 AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
H N+EIGE+AAH+L+E +P+ + Y LLSN+YA + KWD R+ MKE+GV K+ G S
Sbjct: 874 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXX 536
+E + ++ F VGD++HP I+ ++++K+ G+V D +L
Sbjct: 934 WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL-NELQHEQKDPI 992
Query: 537 XXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHH 596
+LAISFGLL++ PI +MKNLRVCNDCHA K +S + REIIVRD RFHH
Sbjct: 993 IFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHH 1052
Query: 597 FKNGTCSCNDFW 608
F+ G CSC D+W
Sbjct: 1053 FEGGACSCKDYW 1064
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 10/422 (2%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
SW +IS N +A+ LF M ++P + V+ C ++ +++ G+Q+HG V
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
LK+GF D +V ++LV++Y G + A +F M RD V++N+LI+G ++ G E AM
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 128 KLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN----AMINGY 179
+LF M D+ T +L+ + G + +++ K S N A++N Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
K I A F + N++ WN M+ Y L + +F + E ++P+ T
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK 299
S L L L G IHS ++K F L+ + + LI+MY+K G +++A + A K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 300 KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF 359
+ WT +I G + D+AL F +M G++ + ++AC+ + EG +
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 360 DMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
+ LV + R G ++++ E N + W +L+S + GN
Sbjct: 615 AQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672
Query: 420 LE 421
E
Sbjct: 673 NE 674
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 205/427 (48%), Gaps = 12/427 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + V++N +I+ A+ LF++M L PD TL ++ CS + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+H Y K+GF + ++ +L+N+YAK ++ A F + +VV WN ++ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 121 GNVEVAMKLFDEMPSRD----AFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA-- 174
++ + ++F +M + +T+ ++L + G +E ++ Q+ K++ NA
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYV 527
Query: 175 ---MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+I+ Y K GK++ A + + G++++SW +MI+GY +A+ F +L G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
V + +A+SA +GL L G+ IH+ F D +L+ +YS+CG IE +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
F+ W A++ G G ++AL +F+ M R G+ + TF + A S
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+ +G K +I + E L+ + + G + A+ + + N+V W +++
Sbjct: 708 MKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAII 765
Query: 412 SSSRNHG 418
++ HG
Sbjct: 766 NAYSKHG 772
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 214/462 (46%), Gaps = 46/462 (9%)
Query: 39 PDGFTLPCVIKGCSRLH-AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARK 97
P+ TL +++GC + + ++ EG+++H +LK+G + + L + Y G++ A K
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 98 VFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDG-LAKCGKVEA 156
VFD+M +R + +WN +I A + LF M S + G L C
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 157 AREVFDQMP--------KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMIS 208
A +V +Q+ + S+V N +I+ Y ++G ++LAR++F + ++ SW +MIS
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL 268
G N EA+ LF + G+MP+ S LSA + L G +H ++K F
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D + +L+ +Y G++ SA +F ++ + + +I GL G ++A+ELF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGN--------------------------KCFDMM 362
G++P + T ++ ACS G + G KC D+
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 363 IN-EYKIVPTVEHYGCLVDILCRAGHLQQAKN---IIESMPMR---PNKVIWMSLLSSSR 415
+Y + VE+ +L G L +N I M + PN+ + S+L +
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 416 NHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWD 455
G+LE+GE +I+ + +A C ++L ++YA GK D
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVC-SVLIDMYAKLGKLD 542
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/618 (37%), Positives = 371/618 (60%), Gaps = 12/618 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SWN II+ YV N + L +F QML + D T+ V GC+ + G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H +K F + ++L++MY+K G++ A+ VF +M DR VVS+ S+I GYAR
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW---- 172
G A+KLF+EM S D +T TA+L+ A+ ++ + V + + K++ + +
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFV 434
Query: 173 -NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG- 230
NA+++ Y K G + A +F +M +++ISWN++I GY N EA+ LF +LL+E
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P T+ L A + L+ GR IH +++++ + D + SL++MY+KCG++ A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F IA+K L WT +I G GMHG +A+ LF +MR+ G++ I+F+ +L ACSH G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LVDEG + F++M +E KI PTVEHY C+VD+L R G L +A IE+MP+ P+ IW +L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L R H ++++ E A + E +P+ TG Y L++NIYA A KW++V +R+ + +RG+
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K+ GCS +E +G++N F+ GD S+P+T+ I A LR++ ++ G+ P T L
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYAL-IDAEE 793
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LA++ G+++ IR+ KNLRVC DCH + K +S + REI++RD
Sbjct: 794 MEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRD 853
Query: 591 NSRFHHFKNGTCSCNDFW 608
++RFH FK+G CSC FW
Sbjct: 854 SNRFHQFKDGHCSCRGFW 871
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 220/422 (52%), Gaps = 17/422 (4%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN++++ + + ++ LF++M+ + D +T CV K S L +V G+Q+HG++L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
K GFG V +SLV Y K + ARKVFD+M +RDV+SWNS+I+GY NG E +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 129 LFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYM 180
+F +M D T ++ G A + R V K + N +++ Y
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
K G ++ A+ +F +M R+++S+ SMI+GY G EA++LFE + +EG+ P T+ +
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
L+ + +L G+ +H ++ ++ D + +L++MY+KCGS++ A VF + K
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 301 LGHWTAIIVGLGMHGLADQALELF---MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ W II G + A++AL LF +E +R P T VL AC+ D+G +
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS--PDERTVACVLPACASLSAFDKGRE 520
Query: 358 CFD-MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
+M N Y V + LVD+ + G L A + + + + + V W +++
Sbjct: 521 IHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGM 577
Query: 417 HG 418
HG
Sbjct: 578 HG 579
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 211/381 (55%), Gaps = 12/381 (3%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVF 99
D TL V++ C+ ++++GK++ ++ GF D + S L MY G++ A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVE 155
D++ + WN L++ A++G+ ++ LF +M S D++T++ + + V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 156 AAREVFDQMPK-----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY 210
++ + K ++SV N+++ Y+K+ +++ AR++F +M R++ISWNS+I+GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 211 QLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG 270
NG + + +F +L G+ TI+S + + ++ GR +HS VK CF +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
+L++MYSKCG ++SA AVF+ ++++ + +T++I G GLA +A++LF EM
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 331 GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQ 390
G+ P T VLN C+ L+DEG + + I E + + L+D+ + G +Q+
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 391 AKNIIESMPMRPNKVIWMSLL 411
A+ + M ++ + + W +++
Sbjct: 451 AELVFSEMRVK-DIISWNTII 470
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/684 (35%), Positives = 363/684 (53%), Gaps = 81/684 (11%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
PT+ S++ +I ++ +F +M H L+PD LP + K C+ L A + GKQI
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVV--------------- 108
H G D FVQ S+ +MY + G MG ARKVFD+M D+DVV
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL 198
Query: 109 --------------------SWNSLIDGYARNGNVEVAMKLFDE---------------- 132
SWN ++ G+ R+G + A+ +F +
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV 258
Query: 133 MPS-----------------------RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS 169
+PS +D +A++D K G V +F+Q +
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 170 VSWNAMINGYMKSGKINLARQLFG----QMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
NA I G ++G ++ A ++F Q N++SW S+I+G NG+ +EA+ELF
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCG 284
+ G+ P+HVTI S L A +A LG+GR H F V+ LD V +G++LI+MY+KCG
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR-VHLLDNVHVGSALIDMYAKCG 437
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
I + VF + K L W +++ G MHG A + + +F + R +KP I+F +L+
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
AC GL DEG K F MM EY I P +EHY C+V++L RAG LQ+A ++I+ MP P+
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 405 VIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMM 464
+W +LL+S R N+++ E AA L +P+ G Y LLSNIYAA G W +V +R M
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 465 KERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVL 524
+ G+ K+ GCS ++ + ++ + GDKSHPQ I K+ E+SK+++ +GH P+ L
Sbjct: 618 ESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFAL 677
Query: 525 XXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGR 584
+LA+ FGLLN TP++++KNLR+C DCHAV K +S+ GR
Sbjct: 678 -HDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGR 736
Query: 585 EIIVRDNSRFHHFKNGTCSCNDFW 608
EI +RD +RFHHFK+G CSC DFW
Sbjct: 737 EIFIRDTNRFHHFKDGICSCGDFW 760
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 181/435 (41%), Gaps = 80/435 (18%)
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
Q H +LK G D ++ + L+ Y+ + A V + D + S++SLI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 122 NVEVAMKLFDEMPSR---------------------------------------DAFTWT 142
++ +F M S DAF
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR---- 198
++ +CG++ AR+VFD+M K V+ +A++ Y + G + ++ +M
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
N++SWN ++SG+ +G EA+ +F+ + G P VT+ S L +V +L GR IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG---------------- 302
+++K D + +++I+MY K G + +++F + G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 303 -------------------HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
WT+II G +G +ALELF EM+ G+KP+ +T +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
AC + + G + + ++ V L+D+ + G + ++ + MP + N
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-N 453
Query: 404 KVIWMSLLSSSRNHG 418
V W SL++ HG
Sbjct: 454 LVCWNSLMNGFSMHG 468
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/611 (37%), Positives = 356/611 (58%), Gaps = 11/611 (1%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VS+N +I Y+ +++ +F + L PD T+ V++ C L + K I+ Y
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+LK GF + V++ L+++YAK G+M AR VF+ M +D VSWNS+I GY ++G++ A
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 127 MKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SVSWNAMIN 177
MKLF M D T+ L+ + ++ + + K SVS NA+I+
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS-NALID 451
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K G++ + ++F M + ++WN++IS G F +++ + K ++P T
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
L L + LA G+ IH +++ ++ + +G +LIEMYSKCG +E++ VF+ ++
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ + WT +I GM+G ++ALE F +M + G+ P ++ FI ++ ACSH GLVDEG
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
CF+ M YKI P +EHY C+VD+L R+ + +A+ I++MP++P+ IW S+L + R
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTS 691
Query: 418 GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
G++E E + +IE +PD G L SN YAA KWDKVS +R+ +K++ + K+ G S
Sbjct: 692 GDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSW 751
Query: 478 VEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXX 537
+E ++ F GD S PQ++AIY L + + G++PD +V
Sbjct: 752 IEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLI 811
Query: 538 XXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHF 597
RLAI+FGLLN E TP+++MKNLRVC DCH VTKL+S I GREI+VRD +RFH F
Sbjct: 812 CGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLF 871
Query: 598 KNGTCSCNDFW 608
K+GTCSC D W
Sbjct: 872 KDGTCSCKDRW 882
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 230/461 (49%), Gaps = 26/461 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LVSWN +IS Y + +AL ++ ++ + ++PD FT+ V+ L V++G+ +HG
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+ LK G V + LV MY K+ AR+VFD+M RD VS+N++I GY + VE
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE 291
Query: 126 AMKLFDEMPSR---DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMING 178
++++F E + D T +++L + A+ +++ M K S N +I+
Sbjct: 292 SVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV 351
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y K G + AR +F M ++ +SWNS+ISGY +G +EAM+LF++++ H+T
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
L +S + LA L G+ +HS +K +D + +LI+MY+KCG + +L +F ++
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH---KGLVDEG 355
W +I G L++ +MR+ + P TF+ L C+ K L E
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
+ C + + ++ L+++ + G L+ + + E M R + V W ++ +
Sbjct: 532 HCC----LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYG 586
Query: 416 NHGNLEIGEYAAHNLIEAD-----PDATGCYTLLSNIYAAA 451
+G GE A + + PD+ ++ IYA +
Sbjct: 587 MYGE---GEKALETFADMEKSGIVPDSV---VFIAIIYACS 621
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 233/472 (49%), Gaps = 34/472 (7%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN II + N +AL + ++ + PD +T P VIK C+ L + G ++ +L
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
+GF D FV ++LV+MY++ G + AR+VFD+M RD+VSWNSLI GY+ +G E A++
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 129 LFDEMPSR----DAFTWTALLDGLAKCGKVEAAREV----FDQMPKKSSVSWNAMINGYM 180
++ E+ + D+FT +++L V+ + + V N ++ Y+
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
K + AR++F +M R+ +S+N+MI GY E++ +F L + P +T+ S
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSS 312
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
L A L L ++I+++M+K F L+ + LI++Y+KCG + +A VF ++ K
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH-------KGLVD 353
W +II G G +A++LF M + + IT++ +++ + KGL
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 354 EGNK---CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
G K C D+ ++ L+D+ + G + + I SM + V W ++
Sbjct: 433 NGIKSGICIDLSVS-----------NALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTV 480
Query: 411 LSSSRNHGNLEIGEYAAHNLIEAD--PD-ATGCYTLLSNIYAAAGKWDKVSH 459
+S+ G+ G + +++ PD AT TL AA + K H
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 189/386 (48%), Gaps = 14/386 (3%)
Query: 45 PCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD 104
P + + S + E ++IH V+ +G F L++ Y+ + E + VF ++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 105 -RDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAARE 159
++V WNS+I +++NG A++ + ++ S D +T+ +++ A E
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 160 VFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGR 215
V++Q+ S NA+++ Y + G + ARQ+F +MP R+L+SWNS+ISGY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 216 FLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
+ EA+E++ L ++P T+ S L A L V+ G+ +H F +K + V+
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L+ MY K A VF + + + +I G + ++++ +F+E KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPD 306
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+T VL AC H + ++ M+ + + TV + L+D+ + G + A+++
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDV 364
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNL 420
SM + + V W S++S G+L
Sbjct: 365 FNSMECK-DTVSWNSIISGYIQSGDL 389
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
I ALS+ S L L R IH+ ++ D LI+ YS S+L+VF+ ++
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 298 -NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE-- 354
K + W +II +GL +ALE + ++R + P TF V+ AC+ GL D
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAEM 124
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G+ ++ +++ + LVD+ R G L +A+ + + MP+R + V W SL+S
Sbjct: 125 GDLVYEQILD-MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGY 182
Query: 415 RNHGNLEIGEYAAHNL 430
+HG E H L
Sbjct: 183 SSHGYYEEALEIYHEL 198
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/611 (37%), Positives = 359/611 (58%), Gaps = 8/611 (1%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
++V+WN +IS Y N +AL +F M + + + VIK C+ L ++ +Q+H
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYARNGNV 123
V+K GF FD+ ++++L+ Y+K M A ++F ++ +VVSW ++I G+ +N
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGY 179
E A+ LF EM + + FT++ +L L E +V ++SS A+++ Y
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
+K GK+ A ++F + +++++W++M++GY G A+++F L K G+ P+ T
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 240 SALSAVSGL-AVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
S L+ + A +G G+ H F +K D + ++L+ MY+K G+IESA VFK
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKC 358
K L W ++I G HG A +AL++F EM++ +K +TFIGV AC+H GLV+EG K
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
FD+M+ + KI PT EH C+VD+ RAG L++A +IE+MP IW ++L++ R H
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 419 NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
E+G AA +I P+ + Y LLSN+YA +G W + + VR++M ER V K+ G S +
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Query: 479 EHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXX 538
E + K F+ GD+SHP IY KL ++S +LK G+ PDTS VL
Sbjct: 739 EVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVL-QDIDDEHKEAVLA 797
Query: 539 XXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHF- 597
RLAI+FGL+ + +P+ I+KNLRVC DCH V KL++ I REI+VRD++RFHHF
Sbjct: 798 QHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFS 857
Query: 598 KNGTCSCNDFW 608
+G CSC DFW
Sbjct: 858 SDGVCSCGDFW 868
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 24/433 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+W +IS Y N +++ L LF +M + P+ FT + + G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H V+K G V +SL+N+Y K G + AR +FDK + VV+WNS+I GYA N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 121 GNVEVAMKLFDEMP-SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW------- 172
G A+ +F M + + ++ + C ++ R F + S V +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR--FTEQLHCSVVKYGFLFDQN 331
Query: 173 --NAMINGYMKSGKINLARQLFGQMPG-RNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
A++ Y K + A +LF ++ N++SW +MISG+ N EA++LF + ++
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 230 GLMPSHVT---ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
G+ P+ T IL+AL +S V H+ +VK ++ +GT+L++ Y K G +
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEV-------HAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
E A VF I +K + W+A++ G G + A+++F E+ + G+KP+ TF +LN C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ K F + ++ ++ L+ + + G+++ A+ + + + + V
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVS 563
Query: 407 WMSLLSSSRNHGN 419
W S++S HG
Sbjct: 564 WNSMISGYAQHGQ 576
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 209/415 (50%), Gaps = 15/415 (3%)
Query: 16 YVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFD 75
+ + R+ +A LF + + D V+K + L G+Q+H +K GF D
Sbjct: 68 FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 76 KFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG-NVEVA---MKLFD 131
V +SLV+ Y K RKVFD+M +R+VV+W +LI GYARN N EV M++ +
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 132 EMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGKINL 187
E ++FT+ A L LA+ G +V + K K+ N++IN Y+K G +
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
AR LF + +++++WNSMISGY NG LEA+ +F + + S + S + +
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN-KKLGHWTA 306
L L +H +VK+ F D + T+L+ YSKC ++ AL +FK I + WTA
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
+I G + ++A++LF EM+R G++P+ T+ +L A ++ ++ Y
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNY 424
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
+ TV L+D + G +++A + + + + V W ++L+ G E
Sbjct: 425 ERSSTVGT--ALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETE 476
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAK 150
A +FDK RD S+ SL+ G++R+G + A +LF + D ++++L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 151 CGKVEAAREVFDQMPK-----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNS 205
R++ Q K SV ++++ YMK R++F +M RN+++W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVG-TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 206 MISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC 265
+ISGY N E + LF + EG P+ T +AL ++ V G G +H+ +VK+
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 266 FDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFM 325
D + SLI +Y KCG++ A +F K + W ++I G +GL +AL +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 326 EMRRIGMKPHAITFIGVLNACSH 348
MR ++ +F V+ C++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
G + S ++ A LF + PGR+ S+ S++ G+ +GR EA LF + + G M +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDCS 94
Query: 238 ILSALSAVSGLAVLGN---GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
I S++ VS A L + GR +H +K F D +GTSL++ Y K + + VF
Sbjct: 95 IFSSVLKVS--ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
+ + + WT +I G + + D+ L LFM M+ G +P++ TF L + +G+
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G + +++ + T+ L+++ + G++++A+ + + ++ + V W S++S
Sbjct: 213 GLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG- 269
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCY--TLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
YAA+ L D +A G + L+ + + + V + +KE +
Sbjct: 270 ----------YAANGL---DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 473 AGCSIVEH 480
CS+V++
Sbjct: 317 LHCSVVKY 324
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 361/643 (56%), Gaps = 51/643 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ S L+ + N S A FR LP L +I + +V E QIH
Sbjct: 1 MASSPLLATSLPQNQLSTTATARFR-------LPPPEKLAVLI---DKSQSVDEVLQIHA 50
Query: 66 YVLKIGFGFDK---FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+L+ + L YA G++ + +F + +D D+ + + I+ + NG
Sbjct: 51 AILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGL 110
Query: 123 VEVAMKLFDEMPSR-----------------------------------DAFTWTALLDG 147
+ A L+ ++ S D + T L+D
Sbjct: 111 KDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDV 170
Query: 148 LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMI 207
AK G V +A++VFD+MP++S VS AMI Y K G + AR LF M R+++SWN MI
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 208 SGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
GY +G +A+ LF+ LL EG P +T+++ALSA S + L GRWIH F+
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 267 DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFME 326
L+ + T LI+MYSKCGS+E A+ VF K + W A+I G MHG + AL LF E
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 327 MRRI-GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
M+ I G++P ITFIG L AC+H GLV+EG + F+ M EY I P +EHYGCLV +L RA
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA 410
Query: 386 GHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLS 445
G L++A I++M M + V+W S+L S + HG+ +G+ A LI + +G Y LLS
Sbjct: 411 GQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLS 470
Query: 446 NIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLR 505
NIYA+ G ++ V+ VR +MKE+G++K+ G S +E K++ F GD+ H ++K IY LR
Sbjct: 471 NIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLR 530
Query: 506 EMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNL 565
++S+++K G+VP+T+ VL RLAI++GL++ + +P++I KNL
Sbjct: 531 KISERIKSHGYVPNTNTVL-QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNL 589
Query: 566 RVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
RVC+DCH VTKL+S I GR+I++RD +RFHHF +G+CSC DFW
Sbjct: 590 RVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 59/361 (16%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P L + I+ N + A LL+ Q+L ++ P+ FT ++K CS + GK I
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLI 148
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H +VLK G G D +V + LV++YAK G++ A+KVFD+M +R +VS ++I YA+ GNV
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 124 EVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM-----PKKSSVS------- 171
E A LFD M RD +W ++DG A+ G A +F ++ PK ++
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 172 -----------W-----------------NAMINGYMKSGKINLARQLFGQMPGRNLISW 203
W +I+ Y K G + A +F P +++++W
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 204 NSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM- 261
N+MI+GY ++G +A+ LF E+ GL P+ +T + L A + ++ G I M
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 262 ----VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI---ANKKLGHWTAIIVGLGMH 314
+K + G L+ + + G ++ A K + A+ L W++++ +H
Sbjct: 389 QEYGIKPKIEHYGC----LVSLLGRAGQLKRAYETIKNMNMDADSVL--WSSVLGSCKLH 442
Query: 315 G 315
G
Sbjct: 443 G 443
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/636 (36%), Positives = 360/636 (56%), Gaps = 33/636 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN ++S Y+ N +A +F M +++ + ++KG + V E
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV----SWTAMVKGYMQEGMVGEA 129
Query: 61 KQIHGYVLK-------IGFG--------------------FDKFVQSSLVNMYAKWGEMG 93
+ + + + + FG D ++++ + G +
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 94 LARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGK 153
AR +FD+M +R+VV+W ++I GY +N V+VA KLF+ MP + +WT++L G G+
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 154 VEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
+E A E F+ MP K ++ NAMI G+ + G+I+ AR++F M R+ +W MI Y+
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERK 309
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
G LEA++LF + K+G+ PS +++S LS + LA L GR +H+ +V+ FD D +
Sbjct: 310 GFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA 369
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
+ L+ MY KCG + A VF ++K + W +II G HGL ++AL++F EM G
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM 429
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
P+ +T I +L ACS+ G ++EG + F+ M +++ + PTVEHY C VD+L RAG + +A
Sbjct: 430 PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAME 489
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGK 453
+IESM ++P+ +W +LL + + H L++ E AA L E +PD G Y LLS+I A+ K
Sbjct: 490 LIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSK 549
Query: 454 WDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGD-KSHPQTKAIYAKLREMSKKLK 512
W V+ VR+ M+ V K GCS +E K++ F G K+HP+ I L + L+
Sbjct: 550 WGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLR 609
Query: 513 LAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCH 572
AG+ PD S VL RLA+++GLL + PIR+MKNLRVC DCH
Sbjct: 610 EAGYSPDCSHVL-HDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 573 AVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
A KL+S + REII+RD +RFHHF NG CSC D+W
Sbjct: 669 AAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 217/464 (46%), Gaps = 56/464 (12%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
SWN I+S Y N +A LF +M +++ + ++ G + + E + V
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVV----SWNGLVSGYIKNRMIVEARN----V 101
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
++ + +++V Y + G +G A +F +M +R+ VSW + G +G ++ A
Sbjct: 102 FELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKAR 161
Query: 128 KLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINL 187
KL+D MP +D T ++ GL + G+V+ AR +FD+M +++ V+W MI GY ++ ++++
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV 221
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
AR+LF MP + +SW SM+ GY L+GR +A E FEV+ + ++ + I+
Sbjct: 222 ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG------- 274
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
+ + G I A VF + ++ W +
Sbjct: 275 --------------------------------FGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I G +AL+LF +M++ G++P + I +L+ C+ + G + ++ +
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQ 361
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAA 427
V L+ + + G L +AK + + + + ++W S++S +HG +GE A
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHG---LGEEAL 417
Query: 428 HNLIEADPDAT--GCYTLLSNIYAA--AGKWDKVSHVREMMKER 467
E T TL++ + A AGK ++ + E M+ +
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 27/395 (6%)
Query: 83 VNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWT 142
++ ++ G++ ARK FD + + + SWNS++ GY NG + A +LFDEM R+ +W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
L+ G K + AR VF+ MP+++ VSW AM+ GYM+ G + A LF +MP RN +S
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG---NGRWIHS 259
W M G +GR +A +L++ +MP ++++ + + GL G R I
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYD------MMPVK-DVVASTNMIGGLCREGRVDEARLIFD 196
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
M + + V T++I Y + ++ A +F+ + K WT++++G + G +
Sbjct: 197 EMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
A E F M MKP I ++ G + + + FD+M + + ++
Sbjct: 253 AEEFFEVM---PMKP-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-----WRGMI 303
Query: 380 DILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD-P 435
R G +A ++ M +RP+ +S+LS +L+ G +L+
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
D ++L +Y G+ K V + + ++
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/676 (35%), Positives = 378/676 (55%), Gaps = 75/676 (11%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VSW +I Y + + + A+ + M+ + P FTL V+ + ++ GK++H +
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----------------------- 103
++K+G + V +SL+NMYAK G+ +A+ VFD+MV
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 104 --------DRDVVSWNSLIDGYARNGNVEVAMKLF-----DEMPSRDAFTWTALLDGLA- 149
+RD+V+WNS+I G+ + G A+ +F D + S D FT ++L A
Sbjct: 232 MAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 150 ----------------------------------KCGKVEAAREVFDQMPKKS--SVSWN 173
+CG VE AR + +Q K +
Sbjct: 292 LEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
A+++GY+K G +N A+ +F + R++++W +MI GY+ +G + EA+ LF ++ G P
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
+ T+ + LS S LA L +G+ IH VK + +LI MY+K G+I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 294 KAI-ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
I + WT++I+ L HG A++ALELF M G++P IT++GV +AC+H GLV
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
++G + FDMM + KI+PT+ HY C+VD+ RAG LQ+A+ IE MP+ P+ V W SLLS
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 413 SSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
+ R H N+++G+ AA L+ +P+ +G Y+ L+N+Y+A GKW++ + +R+ MK+ V K+
Sbjct: 592 ACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE 651
Query: 473 AGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXX 532
G S +E + K++ F V D +HP+ IY ++++ ++K G+VPDT+ VL
Sbjct: 652 QGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL-HDLEEEV 710
Query: 533 XXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNS 592
+LAI+FGL++ +T +RIMKNLRVCNDCH K +S + GREIIVRD +
Sbjct: 711 KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTT 770
Query: 593 RFHHFKNGTCSCNDFW 608
RFHHFK+G CSC D+W
Sbjct: 771 RFHHFKDGFCSCRDYW 786
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 206/464 (44%), Gaps = 107/464 (23%)
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+H V+K G F ++ ++L+N+Y+K G ARK+FD+M R SWN+++ Y++ G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-------------- 168
++ + FD++P RD+ +WT ++ G G+ A V M K+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 169 --------------------------SVSWNAMINGYMKSG------------------- 183
SVS N+++N Y K G
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVS-NSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 184 ------------KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+++LA F QM R++++WNSMISG+ G L A+++F +L++ L
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 232 M-PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P T+ S LSA + L L G+ IHS +V FD+ G++ +LI MYS+CG +E+A
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 291 A---------------------------------VFKAIANKKLGHWTAIIVGLGMHGLA 317
+F ++ ++ + WTA+IVG HG
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 318 DQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGC 377
+A+ LF M G +P++ T +L+ S + G + + +I +V
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNA 453
Query: 378 LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
L+ + +AG++ A + + + V W S++ + HG+ E
Sbjct: 454 LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V+W +I Y + +A+ LFR M+ P+ +TL ++ S L ++ GKQIHG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYARNGNVE 124
+K G + V ++L+ MYAK G + A + FD + +RD VSW S+I A++G+ E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV-----SWNAM 175
A++LF+ M D T+ + G V R+ FD M + + M
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 176 INGYMKSGKINLARQLFGQMPGR-NLISWNSMISG 209
++ + ++G + A++ +MP ++++W S++S
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 355/613 (57%), Gaps = 61/613 (9%)
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWG----EMGLARKVFDKMVDRDVVSWN 111
+++ QIH +K G D + ++ A ++ A K+F++M R+ SWN
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 112 SLIDGYARNGNVE--VAMKLFDEMPSRD-----AFTWTALLDGLAKCGKVEA-------- 156
++I G++ + + +A+ LF EM S + FT+ ++L AK GK++
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 157 ---------------------------AREVF-------------DQMPKKSS-VSWNAM 175
AR +F D+ + V WN M
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVM 214
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
I+GYM+ G AR LF +M R+++SWN+MISGY LNG F +A+E+F + K + P++
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 274
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
VT++S L A+S L L G W+H + +D VLG++LI+MYSKCG IE A+ VF+
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ + + W+A+I G +HG A A++ F +MR+ G++P + +I +L ACSH GLV+EG
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
+ F M++ + P +EHYGC+VD+L R+G L +A+ I +MP++P+ VIW +LL + R
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 454
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
GN+E+G+ A+ L++ P +G Y LSN+YA+ G W +VS +R MKE+ + KD GC
Sbjct: 455 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 514
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXX 535
S+++ G L+ F+V D SHP+ K I + L E+S KL+LAG+ P T+QVL
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL-LNLEEEDKEN 573
Query: 536 XXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFH 595
++A +FGL++ PIRI+KNLR+C DCH+ KL+S +Y R+I VRD RFH
Sbjct: 574 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 633
Query: 596 HFKNGTCSCNDFW 608
HF++G+CSC D+W
Sbjct: 634 HFQDGSCSCMDYW 646
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 196/420 (46%), Gaps = 89/420 (21%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSND--ALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAV 57
M + SWN II + + A+ LF +M+ + + P+ FT P V+K C++ +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 58 QEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDK---------MVDR--- 105
QEGKQIHG LK GFG D+FV S+LV MY G M AR +F K M DR
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 106 --DVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ 163
++V WN +IDGY R G+ + A LFD+M R +W ++ G + G + A EVF +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 164 MPKK---------------------------------------SSVSWNAMINGYMKSGK 184
M K V +A+I+ Y K G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
I A +F ++P N+I+W++MI+G+ ++G+ +A++ F + + G+ PS V ++ L+A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
S ++ GR S MV +DG+ ++ H+
Sbjct: 385 CSHGGLVEEGRRYFSQMVS----VDGL--------------------------EPRIEHY 414
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN 364
++ LG GL D+A E + M +KP + + +L AC +G V+ G + +++++
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/610 (38%), Positives = 345/610 (56%), Gaps = 43/610 (7%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N++I YV+N + + +F M ++ PD +T PCV+K CS + G++IHG K
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKL 129
+G FV + LV+MY K G + AR V D+M RDVVSWNSL+ GYA+N + A+++
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 130 FDEMP----SRDAFTWTALLDGLAKCG--KVEAAREVFDQMPKKSSVSWNAMINGYMKSG 183
EM S DA T +LL ++ V +++F +M KKS VSWN MI YMK+
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 288
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
MP +EA+EL+ + +G P V+I S L
Sbjct: 289 -----------MP--------------------VEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH 303
A + L G+ IH ++ + + +L +LI+MY+KCG +E A VF+ + ++ +
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
WTA+I G G A+ LF +++ G+ P +I F+ L ACSH GL++EG CF +M
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
+ YKI P +EH C+VD+L RAG +++A I+ M M PN+ +W +LL + R H + +IG
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 424 EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGK 483
AA L + P+ +G Y LLSNIYA AG+W++V+++R +MK +G+ K+ G S VE
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 484 LNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXR 543
++ F+VGD+SHPQ+ IY +L + KK+K G+VPD+ L +
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL-HDVEEEDKETHLAVHSEK 616
Query: 544 LAISFGLLNMERR-----TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFK 598
LAI F L+N + IRI KNLR+C DCH KL+S I REII+RD +RFH F+
Sbjct: 617 LAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFR 676
Query: 599 NGTCSCNDFW 608
G CSC D+W
Sbjct: 677 FGVCSCGDYW 686
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K +LVSWN++I Y+ N +A+ L+ +M PD ++ V+ C A+ G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IHGY+ + + ++++L++MYAK G + AR VF+ M RDVVSW ++I Y +
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
G A+ LF ++ D+ + L + G +E R F M ++
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGR----FLEAMELFEVL 226
M++ ++GK+ A + M N W +++ +++ L A +LF+
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ-- 506
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
L P LS + A GRW
Sbjct: 507 ----LAPEQSGYYVLLSNIYAKA----GRW 528
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 145/352 (41%), Gaps = 14/352 (3%)
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEA--AREVFDQMPKKSSVSWNAMINGYMKSGK 184
++L + P F +LD + +R + + + SS+ M Y
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLM-RAYASLKD 89
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
+ AR++F ++P RN+I N MI Y NG + E +++F + + P H T L A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
S + GR IH K +G L+ MY KCG + A V ++ + + W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN 364
+++VG + D ALE+ EM + + A T +L A S+ + DM
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKDMFFK 268
Query: 365 EYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLE 421
K ++ + ++ + + +A + M P+ V S+L + + L
Sbjct: 269 MGK--KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 422 IGEYAAHNLIEAD---PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
+G+ H IE P+ L ++YA G +K V E MK R V+
Sbjct: 327 LGK-KIHGYIERKKLIPNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVV 376
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 348/613 (56%), Gaps = 9/613 (1%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + +N +I+ +V+NH ++ L LF + H L GFT P V+K C+R + + G +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H V+K GF D +SL+++Y+ G + A K+FD++ DR VV+W +L GY +G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAM 175
A+ LF +M D++ +L G +++ + M +K+S +
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
+N Y K GK+ AR +F M +++++W++MI GY N E +ELF +L+E L P
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
+I+ LS+ + L L G W S + +H F + + +LI+MY+KCG++ VFK
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ K + A I GL +G + +F + ++G+ P TF+G+L C H GL+ +G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
+ F+ + Y + TVEHYGC+VD+ RAG L A +I MPMRPN ++W +LLS R
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
+ ++ E LI +P G Y LSNIY+ G+WD+ + VR+MM ++G+ K G
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXX 535
S +E GK++ F+ DKSHP + IYAKL ++ +++L G VP T++ +
Sbjct: 554 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP-TTEFVFFDVEEEEKER 612
Query: 536 XXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFH 595
+LA++ GL++ + IR++KNLRVC DCH V KL+S I REI+VRDN+RFH
Sbjct: 613 VLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 596 HFKNGTCSCNDFW 608
F NG+CSCND+W
Sbjct: 673 CFTNGSCSCNDYW 685
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 148/297 (49%), Gaps = 23/297 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+W+ +I Y N + + LF QML +L PD F++ + C+ L A+ G
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ + + F + F+ ++L++MYAK G M +VF +M ++D+V N+ I G A+N
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMP-----KKSSVS 171
G+V+++ +F + S D T+ LL G G ++ F+ + K++
Sbjct: 393 GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEH 452
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKE- 229
+ M++ + ++G ++ A +L MP R N I W +++SG R ++ +L E +LKE
Sbjct: 453 YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG----CRLVKDTQLAETVLKEL 508
Query: 230 -GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG---VLGTSLIEMYSK 282
L P + LS + + GRW + V+ + G + G S IE+ K
Sbjct: 509 IALEPWNAGNYVQLSNIYSVG----GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 38/316 (12%)
Query: 191 LFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
LF N+ +NS+I+G+ N F E ++LF + K GL T L A + +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG 310
G +HS +VK F+ D TSL+ +YS G + A +F I ++ + WTA+ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
G +A++LF +M +G+KP + + VL+AC H G +D G M E ++
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQK 245
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESM-------------------------------- 398
LV++ + G +++A+++ +SM
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 399 --PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY--TLLSNIYAAAGKW 454
++P++ + LSS + G L++GE+ +LI+ T + L ++YA G
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 455 DKVSHVREMMKERGVL 470
+ V + MKE+ ++
Sbjct: 365 ARGFEVFKEMKEKDIV 380
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 318/516 (61%), Gaps = 35/516 (6%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN +I + H ALLL ML + + D F+L V+K CSRL V+ G QIHG++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG------- 121
K G D F+Q+ L+ +Y K G +GL+R++FD+M RD VS+NS+IDGY + G
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 122 ---------------------------NVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKV 154
V++A KLF +MP +D +W +++DG K G++
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 155 EAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
E A+ +FD MP++ V+W MI+GY K G ++ A+ LF QMP R+++++NSM++GY N
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 215 RFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
+EA+E+F + KE L+P T++ L A++ L L +H ++V+ F L G LG
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 388
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
+LI+MYSKCGSI+ A+ VF+ I NK + HW A+I GL +HGL + A ++ +++ R+ +K
Sbjct: 389 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLK 448
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
P ITF+GVLNACSH GLV EG CF++M ++KI P ++HYGC+VDIL R+G ++ AKN
Sbjct: 449 PDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGK 453
+IE MP+ PN VIW + L++ +H E GE A +LI Y LLSN+YA+ G
Sbjct: 509 LIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGM 568
Query: 454 WDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIV 489
W V VR MMKER + K GCS +E G+++ F V
Sbjct: 569 WKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 149/397 (37%), Gaps = 113/397 (28%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSND-ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M L+SWN +IS Y D A LF M DL+
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS-------------------- 254
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+S+++ Y K G + A+ +FD M RDVV+W ++IDGYA+
Sbjct: 255 -------------------WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN------ 173
G V A LFD+MP RD + +++ G + A E+F M K+S + +
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 174 ----------------------------------AMINGYMKSGKINLARQLFGQMPGRN 199
A+I+ Y K G I A +F + ++
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+ WN+MI G ++G A ++ + + L P +T + L+A S HS
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS-----------HS 464
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
+VK G E+ + IE +L H+ ++ L G +
Sbjct: 465 GLVKE--------GLLCFELMRRKHKIEP-----------RLQHYGCMVDILSRSGSIEL 505
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
A L EM ++P+ + + L ACSH + G
Sbjct: 506 AKNLIEEMP---VEPNDVIWRTFLTACSHHKEFETGE 539
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/652 (34%), Positives = 362/652 (55%), Gaps = 45/652 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ P +++W +I C+ + AL F +M PD P V+K C+ + ++ G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL-------------------------- 94
+ +HG+++++G D + ++L+NMYAK MG
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 95 ----------ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRD----AFT 140
R+VF+ M +DVVS+N++I GYA++G E A+++ EM + D +FT
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMP 196
+++L ++ V +E+ + +K S +++++ Y KS +I + ++F ++
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
R+ ISWNS+++GY NGR+ EA+ LF ++ + P V S + A + LA L G+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
+H ++++ F + + ++L++MYSKCG+I++A +F + WTAII+G +HG
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+A+ LF EM+R G+KP+ + F+ VL ACSH GLVDE F+ M Y + +EHY
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
+ D+L RAG L++A N I M + P +W +LLSS H NLE+ E A + D +
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
G Y L+ N+YA+ G+W +++ +R M+++G+ K CS +E + K + F+ GD+SHP
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604
Query: 497 TKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERR 556
I L+ + ++++ G+V DTS VL RLA++FG++N E
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVL-HDVDEEHKRELLFGHSERLAVAFGIINTEPG 663
Query: 557 TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
T IR+ KN+R+C DCH K +S I REIIVRDNSRFHHF G CSC D+W
Sbjct: 664 TTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 302/472 (63%), Gaps = 1/472 (0%)
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP 196
D T L+ A+ G +++ +VF+ +P V AM+ + G + AR+LF MP
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
R+ I+WN+MISGY G EA+ +F ++ EG+ + V ++S LSA + L L GRW
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRW 261
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
HS++ ++ + L T+L+++Y+KCG +E A+ VF + K + W++ + GL M+G
Sbjct: 262 AHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF 321
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
++ LELF M++ G+ P+A+TF+ VL CS G VDEG + FD M NE+ I P +EHYG
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYG 381
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
CLVD+ RAG L+ A +II+ MPM+P+ +W SLL +SR + NLE+G A+ ++E +
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETA 441
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
G Y LLSNIYA + WD VSHVR+ MK +GV K GCS++E G+++ F VGDKSHP+
Sbjct: 442 NHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK 501
Query: 497 TKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERR 556
I A +++S++L+LAG+ DT+ V+ + AI+FG+++++
Sbjct: 502 YTQIDAVWKDISRRLRLAGYKADTTPVM-FDIDEEEKEDALCLHSEKAAIAFGIMSLKED 560
Query: 557 TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
PIRI+KNLRVC DCH V+ ++S I+ REIIVRD +RFHHFK+G CSCN FW
Sbjct: 561 VPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 165/340 (48%), Gaps = 44/340 (12%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLH--HDLLPDGFTLPCVIKGCSRLHAVQEG 60
KPTL + N +I + + + +R++L +DL PD +T+ +++ C+ L + G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+HG ++ GF D VQ+ L+++YA+ G + KVF+ + D V +++ AR
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVF------------------- 161
G+V A KLF+ MP RD W A++ G A+ G+ A VF
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 162 ---DQMPKKSSVSW-----------------NAMINGYMKSGKINLARQLFGQMPGRNLI 201
Q+ W +++ Y K G + A ++F M +N+
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
+W+S ++G +NG + +ELF ++ ++G+ P+ VT +S L S + + G+ H
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDS 366
Query: 262 VKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANK 299
+++ F ++ L L+++Y++ G +E A+++ + + K
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/618 (37%), Positives = 355/618 (57%), Gaps = 13/618 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRL-HAVQE 59
M + L+SWN +I+ N +A+ LF Q+L L PD +T+ V+K S L +
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
KQ+H + +KI D FV ++L++ Y++ M A +F++ + D+V+WN+++ GY +
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQ 494
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS-----V 170
+ + +KLF M + D FT + + ++V K V
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
S + +++ Y+K G ++ A+ F +P + ++W +MISG NG A +F + G
Sbjct: 555 S-SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
++P TI + A S L L GR IH+ +K D +GTSL++MY+KCGSI+ A
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+FK I + W A++VGL HG + L+LF +M+ +G+KP +TFIGVL+ACSH G
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LV E K M +Y I P +EHY CL D L RAG ++QA+N+IESM M + ++ +L
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L++ R G+ E G+ A L+E +P + Y LLSN+YAAA KWD++ R MMK V
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
KD G S +E + K++ F+V D+S+ QT+ IY K+++M + +K G+VP+T L
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTL-VDVEE 912
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LA++FGLL+ TPIR++KNLRVC DCH K ++ +Y REI++RD
Sbjct: 913 EEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRD 972
Query: 591 NSRFHHFKNGTCSCNDFW 608
+RFH FK+G CSC D+W
Sbjct: 973 ANRFHRFKDGICSCGDYW 990
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 211/418 (50%), Gaps = 16/418 (3%)
Query: 13 ISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGF 72
+S Y+H+ + + L F M+ D+ D T ++ ++ ++ G+Q+H LK+G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 73 GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDE 132
V +SL+NMY K + G AR VFD M +RD++SWNS+I G A+NG A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 133 M----PSRDAFTWTALLDGLAKCGK-VEAAREVFDQMPKKSSVS----WNAMINGYMKSG 183
+ D +T T++L + + + +++V K ++VS A+I+ Y ++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
+ A LF + +L++WN+M++GY + + ++LF ++ K+G T+ +
Sbjct: 467 CMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH 303
L + G+ +H++ +K +DLD + + +++MY KCG + +A F +I
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
WT +I G +G ++A +F +MR +G+ P T + A S +++G + +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHA 642
Query: 364 NEYKIVPTVEHY--GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
N K+ T + + LVD+ + G + A + + + M N W ++L HG
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGE 699
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 82/370 (22%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK H +L ++F+ ++L++MY+K G + AR+VFDKM DRD+VSWNS++ YA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 120 NG-----NVEVAMKLFDEM------PSR-------------------------------- 136
+ N++ A LF + SR
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 137 -DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSG----KINLAR-- 189
D F AL++ K GKV+ + +F++MP + V WN M+ Y++ G I+L+
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 190 ------------QLFGQMPGRN--------------------LISWNSMISGYQLNGRFL 217
+L ++ G + +I N +S Y +G++
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 218 EAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLI 277
++ F +++ + VT + L+ + L G+ +H +K DL + SLI
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLI 357
Query: 278 EMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
MY K A VF ++ + L W ++I G+ +GL +A+ LFM++ R G+KP
Sbjct: 358 NMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQY 417
Query: 338 TFIGVLNACS 347
T VL A S
Sbjct: 418 TMTSVLKAAS 427
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
G+ H+ ++ + + L +LI MYSKCGS+ A VF + ++ L W +I+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 314 HGLA-----DQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI 368
QA LF +R+ + +T +L C H G V ++ F + +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGL 176
Query: 369 VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
G LV+I + G +++ K + E MP R + V+W +L + G
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMG 225
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/614 (37%), Positives = 341/614 (55%), Gaps = 7/614 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP-DGFTLPCVIKGCSRLHAVQE 59
M + + WN +IS Y N +++ +FR +++ D TL ++ + L ++
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G QIH K G +V + +++Y+K G++ + +F + D+V++N++I GY
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 120 NGNVEVAMKLFDE-MPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NA 174
NG E+++ LF E M S + L+ + G + + K + +S A
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+ Y K +I AR+LF + P ++L SWN+MISGY NG +A+ LF + K P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
VTI LSA + L L G+W+H + F+ + T+LI MY+KCGSI A +F
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
+ K W +I G G+HG +AL +F EM G+ P +TF+ VL ACSH GLV E
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G++ F+ MI+ Y P+V+HY C+VDIL RAGHLQ+A IE+M + P +W +LL +
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
R H + + + L E DPD G + LLSNI++A + + + VR+ K+R + K G
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 475 CSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXX 534
+++E + F GD+SHPQ K IY KL ++ K++ AG+ P+T L
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL-HDVEEEERE 718
Query: 535 XXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRF 594
RLAI+FGL+ E T IRI+KNLRVC DCH VTKL+S I R I+VRD +RF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRF 778
Query: 595 HHFKNGTCSCNDFW 608
HHFK+G CSC D+W
Sbjct: 779 HHFKDGVCSCGDYW 792
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 210/429 (48%), Gaps = 15/429 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
+ +P + +N+++ + N + +L +F + DL P+ T I S +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ IHG + G + + S++V MY K+ + ARKVFD+M ++D + WN++I GY +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 120 N----GNVEVAMKLFDEMPSR-DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA 174
N +++V L +E +R D T +L +A+ ++ ++ K S +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 175 MING----YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
++ G Y K GKI + LF + +++++N+MI GY NG ++ LF+ L+ G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
T++S L VSG +L IH + +K F + T+L +YSK IESA
Sbjct: 318 ARLRSSTLVS-LVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F K L W A+I G +GL + A+ LF EM++ P+ +T +L+AC+ G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+ G D ++ ++ L+ + + G + +A+ + + M + N+V W ++
Sbjct: 435 ALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTM 492
Query: 411 LSSSRNHGN 419
+S HG
Sbjct: 493 ISGYGLHGQ 501
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/659 (36%), Positives = 352/659 (53%), Gaps = 57/659 (8%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
+VSWN II Y + AL +F +M + PD TL V+ C+ L GKQ+H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
+ + + FV + LV+MYAK G M A VF M +DVVSWN+++ GY++ G E
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCG----KVEAAREVFDQMPKKSSVSW---- 172
A++LF++M D TW+A + G A+ G + R++ K + V+
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 173 --------------------------------------NAMINGYMKSGKINLARQLFGQ 194
N +I+ Y K K++ AR +F
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 195 MPG--RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM--PSHVTILSALSAVSGLAV 250
+ R++++W MI GY +G +A+EL + +E P+ TI AL A + LA
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 251 LGNGRWIHSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
L G+ IH++ +++ + + + LI+MY+KCGSI A VF + K WT+++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
G GMHG ++AL +F EMRRIG K +T + VL ACSH G++D+G + F+ M + +
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHN 429
P EHY CLVD+L RAG L A +IE MPM P V+W++ LS R HG +E+GEYAA
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 430 LIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIV 489
+ E + G YTLLSN+YA AG+W V+ +R +M+ +GV K GCS VE F V
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 490 GDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFG 549
GDK+HP K IY L + +++K G+VP+T L +LA+++G
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFAL-HDVDDEEKDDLLFEHSEKLALAYG 791
Query: 550 LLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+L + IRI KNLRVC DCH +S I +II+RD+SRFHHFKNG+CSC +W
Sbjct: 792 ILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 233/466 (50%), Gaps = 58/466 (12%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN +I Y N +N L LF M PD +T P V K C + +V+ G+ H L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
GF + FV ++LV MY++ + ARKVFD+M DVVSWNS+I+ YA+ G +VA++
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 129 LFDEMPS----------------------------------------RDAFTWTALLDGL 148
+F M + ++ F L+D
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 149 AKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWN 204
AKCG ++ A VF M K VSWNAM+ GY + G+ A +LF +M ++++W+
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH 264
+ ISGY G EA+ + +L G+ P+ VT++S LS + + L +G+ IH + +K+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 265 CFDL-------DGVLGTSLIEMYSKCGSIESALAVFKAIANKK--LGHWTAIIVGLGMHG 315
DL + ++ LI+MY+KC +++A A+F +++ K+ + WT +I G HG
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 316 LADQALELFMEM--RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI-NEYKIVPTV 372
A++ALEL EM +P+A T L AC+ + G + + N+ VP
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 373 EHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
CL+D+ + G + A+ + ++M M N+V W SL++ HG
Sbjct: 515 VS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 174/373 (46%), Gaps = 53/373 (14%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
K +V+W+ IS Y +AL + RQML + P+ TL V+ GC+ + A+ GK+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 63 IHGYVLKI-------GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV--DRDVVSWNSL 113
IH Y +K G G + V + L++MYAK ++ AR +FD + +RDVV+W +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 114 IDGYARNGNVEVAMKLFDEMPSRD------AFTWTALLDGLA-----KCGKVEAAREVFD 162
I GY+++G+ A++L EM D AFT + L A + GK A + +
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 163 QMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMEL 222
Q N +I+ Y K G I+ AR +F M +N ++W S+++GY ++G EA+ +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 223 FEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
F+ + + G VT+L L A S HS M+ + + T
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACS-----------HSGMIDQGMEYFNRMKT-------- 607
Query: 283 CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
VF + H+ ++ LG G + AL L EM M+P + ++
Sbjct: 608 ---------VFGVSPGPE--HYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVAF 653
Query: 343 LNACSHKGLVDEG 355
L+ C G V+ G
Sbjct: 654 LSCCRIHGKVELG 666
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 181/432 (41%), Gaps = 65/432 (15%)
Query: 45 PCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD 104
P I C + V K IH +L G + S L++ Y G + A + +
Sbjct: 32 PPFIHKCKTISQV---KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 105 RD--VVSWNSLIDGYARNGNVEVAMKLFDEMPS----RDAFTWTALLDGLA-----KCGK 153
D V WNSLI Y NG + LF M S D +T+ + +CG+
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 154 VEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
A + V NA++ Y + ++ AR++F +M +++SWNS+I Y
Sbjct: 148 SAHALSLVTGFISNVFVG-NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 214 GRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL 272
G+ A+E+F + E G P ++T+++ L + L G+ +H F V + +
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 273 GTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR--- 329
G L++MY+KCG ++ A VF ++ K + W A++ G G + A+ LF +M+
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 330 --------------------------------IGMKPHAITFIGVLNACSHKGLVDEGNK 357
G+KP+ +T I VL+ C+ G + G +
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 358 --CFDMMINEYKIVPTVEHYG-------CLVDILCRAGHLQQAKNIIESM-PMRPNKVIW 407
C+ + +Y I +G L+D+ + + A+ + +S+ P + V W
Sbjct: 387 IHCYAI---KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 408 MSLLSSSRNHGN 419
++ HG+
Sbjct: 444 TVMIGGYSQHGD 455
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 9/252 (3%)
Query: 175 MINGYMKSGKINLARQLFGQMPGRN--LISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+I+ Y+ G ++ A L + P + + WNS+I Y NG + + LF ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P + T A ++ + G H+ + F + +G +L+ MYS+C S+ A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSHKGL 351
F ++ + W +II G ALE+F M G +P IT + VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 352 VDEGNK--CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G + CF + +++ + CLVD+ + G + +A + +M ++ + V W +
Sbjct: 245 HSLGKQLHCFAV---TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNA 300
Query: 410 LLSSSRNHGNLE 421
+++ G E
Sbjct: 301 MVAGYSQIGRFE 312
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 342/618 (55%), Gaps = 41/618 (6%)
Query: 31 QMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWG 90
Q+L P T +I+ CS+ A++EGK++H ++ GF + + L+ MYAK G
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 91 EMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAK 150
+ ARKVFD+M +RD+ SWN +++GYA G +E A KLFDEM +D+++WTA++ G K
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 151 CGKVEAAREVFDQMPK----------------------------------------KSSV 170
+ E A ++ M + V
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
W+++++ Y K G I+ AR +F ++ ++++SW SMI Y + R+ E LF L+
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P+ T L+A + L G+ +H +M + FD +SL++MY+KCG+IESA
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
V L WT++I G +G D+AL+ F + + G KP +TF+ VL+AC+H G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LV++G + F + ++++ T +HY CLVD+L R+G +Q K++I MPM+P+K +W S+
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L +GN+++ E AA L + +P+ Y ++NIYAAAGKW++ +R+ M+E GV
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K G S E + K + FI D SHP I LRE+ KK+K G+VP TS VL
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVL-HDVED 613
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LA++F +L+ E T I++ KNLR C DCH K +S I R+I VRD
Sbjct: 614 EQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRD 673
Query: 591 NSRFHHFKNGTCSCNDFW 608
++RFH F+NG CSC D+W
Sbjct: 674 STRFHCFENGQCSCGDYW 691
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 186/361 (51%), Gaps = 12/361 (3%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLH-HDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
SW +++ YV + +AL+L+ M + P+ FT+ + + + ++ GK+IHG+
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+++ G D+ + SSL++MY K G + AR +FDK+V++DVVSW S+ID Y ++
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 127 MKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMING 178
LF E+ + +T+ +L+ A E ++V M + S + +++++
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y K G I A+ + P +L+SW S+I G NG+ EA++ F++LLK G P HVT
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 239 LSALSAVSGLAVLGNG-RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
++ LSA + ++ G + +S KH T L+++ ++ G E +V +
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 298 NKKLGH-WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
K W +++ G +G D A E E+ +I + + +T++ + N + G +E
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMANIYAAAGKWEEEG 542
Query: 357 K 357
K
Sbjct: 543 K 543
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+VSW +I Y + R + LF +++ P+ +T V+ C+ L + GKQ+HG
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
Y+ ++GF F SSLV+MY K G + A+ V D D+VSW SLI G A+NG +
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 126 AMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMI 176
A+K FD + D T+ +L G VE E F + +K +S + ++
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 177 NGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK-EGLMPS 234
+ +SG+ + + +MP + + W S++ G G A E + L K E P
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV 523
Query: 235 HVTILSALSAVSG 247
++ + A +G
Sbjct: 524 TYVTMANIYAAAG 536
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 215 RFLEAMELF--EVLLKEGLM-------PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC 265
RF EA+++ + LL+E + P T + + S L G+ +H +
Sbjct: 56 RFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 266 FDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFM 325
F V+ L+ MY+KCGS+ A VF + N+ L W ++ G GL ++A +LF
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 326 EM 327
EM
Sbjct: 176 EM 177
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 338/575 (58%), Gaps = 28/575 (4%)
Query: 61 KQIHGYVLKIGFGFDK---FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
KQ+H + L+ + + F+ ++ + + + ++ A +VFD + + WN+LI
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 118 ARN-GNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK---- 167
A + E A L+ +M R D T+ +L A ++V Q+ K
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
N +I+ Y G ++LAR++F +MP R+L+SWNSMI G + A++LF +
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM- 243
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC---FDLDGVLGTSLIEMYSKCG 284
+ P T+ S LSA +GL L G W H+F+++ C +D ++ SLIEMY KCG
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM--RRIGMKPHAITFIGV 342
S+ A VF+ + + L W A+I+G HG A++A+ F M +R ++P+++TF+G+
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
L AC+H+G V++G + FDMM+ +Y I P +EHYGC+VD++ RAG++ +A +++ SMPM+P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 403 NKVIWMSLLSSSRNHG-NLEIGEYAAHNLIEADPD-------ATGCYTLLSNIYAAAGKW 454
+ VIW SLL + G ++E+ E A N+I D +G Y LLS +YA+A +W
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 455 DKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLA 514
+ V VR++M E G+ K+ GCS +E G + F GD SHPQTK IY +L+ + +L+
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Query: 515 GHVPDTSQV-LXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHA 573
G++PD SQ L RLAI+FGL+N+ +TPIRI KNLRVCNDCH
Sbjct: 544 GYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 603
Query: 574 VTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
VTKL+S ++ EIIVRD RFHHFK+G+CSC D+W
Sbjct: 604 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 16/236 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +LVSWN +I V + AL LFR+M PDG+T+ V+ C+ L ++ G
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLG 270
Query: 61 KQIHGYVLK---IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
H ++L+ + D V++SL+ MY K G + +A +VF M RD+ SWN++I G+
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 118 ARNGNVEVAMKLFDEMPSR------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS 171
A +G E AM FD M + ++ T+ LL G V R+ FD M + +
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 172 -----WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAME 221
+ +++ ++G I A + MP + + + W S++ G +E E
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 357/643 (55%), Gaps = 44/643 (6%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPD--GFTLPCVIKGCSRLHAVQEGKQIH 64
V+WN++I Y + A+ + M+ D + TL ++K S V GKQIH
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G V+K+GF V S L+ MYA G + A+KVF + DR+ V +NSL+ G G +E
Sbjct: 163 GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIE 222
Query: 125 VAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVF----------DQMPKKSSVS--- 171
A++LF M +D+ +W A++ GLA+ G + A E F DQ P S +
Sbjct: 223 DALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACG 281
Query: 172 --------------------------WNAMINGYMKSGKINLARQLFGQMPGRNLISWNS 205
+A+I+ Y K ++ A+ +F +M +N++SW +
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTA 341
Query: 206 MISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC 265
M+ GY GR EA+++F + + G+ P H T+ A+SA + ++ L G H +
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 266 FDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFM 325
+ SL+ +Y KCG I+ + +F + + WTA++ G A + ++LF
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 326 EMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
+M + G+KP +T GV++ACS GLV++G + F +M +EY IVP++ HY C++D+ R+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 386 GHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLS 445
G L++A I MP P+ + W +LLS+ RN GNLEIG++AA +LIE DP YTLLS
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581
Query: 446 NIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLR 505
+IYA+ GKWD V+ +R M+E+ V K+ G S ++ +GKL+ F D+S P IYAKL
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641
Query: 506 EMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNL 565
E++ K+ G+ PDTS V RLAI+FGL+ + PIR+ KNL
Sbjct: 642 ELNNKIIDNGYKPDTSFV-HHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNL 700
Query: 566 RVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
RVC DCH TK +S++ GREI+VRD RFH FK+GTCSC DFW
Sbjct: 701 RVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 198/444 (44%), Gaps = 75/444 (16%)
Query: 48 IKGCSRLHAVQEG---KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD 104
IK C L A + K IHG +++ + F+ +++V+ YA AR+VFD++
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 105 RDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM 164
++ SWN+L+ Y++ G + F+++P RD TW L++G + G V AA + ++ M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 165 PKKSS--------------------VSWNAMING--------------------YMKSGK 184
+ S VS I+G Y G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 185 INLARQLFGQMPGRNLISWNS------------------------------MISGYQLNG 214
I+ A+++F + RN + +NS MI G NG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
EA+E F + +GL S L A GL + G+ IH+ +++ F +G+
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+LI+MY KC + A VF + K + WTA++VG G G A++A+++F++M+R G+ P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
T ++AC++ ++EG++ I ++ V LV + + G + + +
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 395 IESMPMRPNKVIWMSLLSSSRNHG 418
M +R + V W +++S+ G
Sbjct: 429 FNEMNVR-DAVSWTAMVSAYAQFG 451
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 166/371 (44%), Gaps = 43/371 (11%)
Query: 118 ARNGNVEVAM---KLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA 174
ARN + V M + +P + F + ++ A AR VFD++P+ + SWN
Sbjct: 18 ARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNN 77
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMP 233
++ Y K+G I+ F ++P R+ ++WN +I GY L+G A++ + ++++
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK----------- 282
+ VT+++ L S + G+ IH ++K F+ ++G+ L+ MY+
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 283 --------------------CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
CG IE AL +F+ + + W A+I GL +GLA +A+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIE 256
Query: 323 LFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDIL 382
F EM+ G+K F VL AC G ++EG + +I + L+D+
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMY 315
Query: 383 CRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE--IGEYAAHNLIEADPDATGC 440
C+ L AK + + M + N V W +++ G E + + DPD
Sbjct: 316 CKCKCLHYAKTVFDRMKQK-NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH--- 371
Query: 441 YTLLSNIYAAA 451
YTL I A A
Sbjct: 372 YTLGQAISACA 382
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 11/258 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW ++ Y R+ +A+ +F M + PD +TL I C+ + +++EG
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q HG + G V +SLV +Y K G++ + ++F++M RD VSW +++ YA+
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV-----S 171
G ++LFD+M D T T ++ ++ G VE + F M + +
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 172 WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLK-E 229
++ MI+ + +SG++ A + MP + I W +++S + G E L++ +
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 230 GLMPSHVTILSALSAVSG 247
P+ T+LS++ A G
Sbjct: 571 PHHPAGYTLLSSIYASKG 588
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/618 (35%), Positives = 349/618 (56%), Gaps = 12/618 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M L+SWN +++ +V++ RS DAL L M+ + T + C ++G
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HG V+ G +++ + ++LV+MY K GEM +R+V +M RDVV+WN+LI GYA +
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDG------LAKCGKVEAAREVFDQMPKKSSV 170
+ + A+ F M S + T ++L L + GK A V V
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N++I Y K G ++ ++ LF + RN+I+WN+M++ +G E ++L + G
Sbjct: 502 K-NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ + LSA + LAVL G+ +H VK F+ D + + +MYSKCG I +
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+ N+ L W +I LG HG ++ F EM +G+KP +TF+ +L ACSH G
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LVD+G +DM+ ++ + P +EH C++D+L R+G L +A+ I MPM+PN ++W SL
Sbjct: 681 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 740
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L+S + HGNL+ G AA NL + +P+ Y L SN++A G+W+ V +VR+ M + +
Sbjct: 741 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 800
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K CS V+ + K++ F +GD++HPQT IYAKL ++ K +K +G+V DTSQ L
Sbjct: 801 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL-QDTDE 859
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
RLA+++ L++ + +RI KNLR+C+DCH+V K +S + GR I++RD
Sbjct: 860 EQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 919
Query: 591 NSRFHHFKNGTCSCNDFW 608
RFHHF+ G CSC D+W
Sbjct: 920 QYRFHHFERGLCSCKDYW 937
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 204/429 (47%), Gaps = 9/429 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +VSW ++ Y + + +++ M + + ++ VI C L G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QI G V+K G V++SL++M G + A +FD+M +RD +SWNS+ YA+N
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
G++E + ++F M ++ T + LL L + R + + K S
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N ++ Y +G+ A +F QMP ++LISWNS+++ + +GR L+A+ L ++ G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
++VT SAL+A GR +H +V + ++G +L+ MY K G + + V
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
+ + + W A+I G D+AL F MR G+ + IT + VL+AC G +
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
E K I L+ + + G L ++++ + R N + W ++L+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLA 538
Query: 413 SSRNHGNLE 421
++ +HG+ E
Sbjct: 539 ANAHHGHGE 547
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 207/439 (47%), Gaps = 26/439 (5%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAV-QEGKQIHG 65
VSWN ++S V + + FR+M + P F + ++ C R ++ +EG Q+HG
Sbjct: 24 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 83
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+V K G D +V ++++++Y +G + +RKVF++M DR+VVSW SL+ GY+ G E
Sbjct: 84 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 126 AMKLFDEMPSRD-AFTWTALLDGLAKCG--KVEA-AREVFDQMPKKSSVS----WNAMIN 177
+ ++ M ++ ++ CG K E+ R++ Q+ K S N++I+
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
G ++ A +F QM R+ ISWNS+ + Y NG E+ +F ++ + + T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ + LS + + GR IH +VK FD + +L+ MY+ G A VFK +
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
K L W +++ G + AL L M G + +TF L AC ++G
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
+++ + LV + + G + +++ ++ MP R + V W +L
Sbjct: 384 LHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNAL------- 434
Query: 418 GNLEIGEYAAHNLIEADPD 436
IG YA + DPD
Sbjct: 435 ----IGGYAE----DEDPD 445
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 166/349 (47%), Gaps = 23/349 (6%)
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM------PSRDA 138
MY K+G + AR +FD M R+ VSWN+++ G R G M+ F +M PS +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS--S 58
Query: 139 FTWTALLDGLAKCGKV-EAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFG 193
F +L+ + G + +V + K +S A+++ Y G ++ +R++F
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 194 QMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
+MP RN++SW S++ GY G E +++++ + EG+ + ++ +S+ L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
GR I +VK + + SLI M G+++ A +F ++ + W +I
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
+G +++ +F MRR + ++ T +L+ H VD ++ + I+ + +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VD--HQKWGRGIHGLVVKMGFD 293
Query: 374 HYGCLVDILCR----AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
C+ + L R AG +A + + MP + + + W SL++S N G
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDG 341
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/535 (40%), Positives = 321/535 (60%), Gaps = 2/535 (0%)
Query: 75 DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP 134
D F + +++ Y + A+ FD+M +D SWN++I GYAR G +E A +LF M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 135 SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQ 194
++ +W A++ G +CG +E A F P + V+W AMI GYMK+ K+ LA +F
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 195 MP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
M +NL++WN+MISGY N R + ++LF +L+EG+ P+ + SAL S L+ L
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
GR IH + K D TSLI MY KCG + A +F+ + K + W A+I G
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
HG AD+AL LF EM ++P ITF+ VL AC+H GLV+ G F+ M+ +YK+ P +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
HY C+VD+L RAG L++A +I SMP RP+ ++ +LL + R H N+E+ E+AA L++
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 434 DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKS 493
+ Y L+NIYA+ +W+ V+ VR+ MKE V+K G S +E R K++ F D+
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 494 HPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNM 553
HP+ +I+ KL+E+ KK+KLAG+ P+ L +LA++FG + +
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPELEFAL-HNVEEEQKEKLLLWHSEKLAVAFGCIKL 601
Query: 554 ERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+ + I++ KNLR+C DCH K +S I REIIVRD +RFHHFK+G+CSC D+W
Sbjct: 602 PQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 9/203 (4%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
LV+WN +IS YV N R D L LFR ML + P+ L + GCS L A+Q G+QIH
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
V K D +SL++MY K GE+G A K+F+ M +DVV+WN++I GYA++GN +
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAM 175
A+ LF EM D T+ A+L G V F+ M + V + M
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 176 INGYMKSGKINLARQLFGQMPGR 198
++ ++GK+ A +L MP R
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFR 450
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 167/326 (51%), Gaps = 17/326 (5%)
Query: 101 KMVDRD-VVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAK-CGKVEAAR 158
K D+D + N +I R+G+++ A+++F M +++ TW +LL G++K ++ A
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAH 113
Query: 159 EVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLE 218
++FD++P+ + S+N M++ Y+++ A+ F +MP ++ SWN+MI+GY G +
Sbjct: 114 QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173
Query: 219 AMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN-GRWIHSFMVKHCFDLDGVLG-TSL 276
A ELF ++++ +S + +SG G+ + H F V + GV+ T++
Sbjct: 174 ARELFYSMMEKNE-------VSWNAMISGYIECGDLEKASHFFKVA---PVRGVVAWTAM 223
Query: 277 IEMYSKCGSIESALAVFKAIA-NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
I Y K +E A A+FK + NK L W A+I G + + L+LF M G++P+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
+ L CS + G + ++++ + V L+ + C+ G L A +
Sbjct: 284 SSGLSSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 396 ESMPMRPNKVIWMSLLSSSRNHGNLE 421
E M + + V W +++S HGN +
Sbjct: 343 EVMK-KKDVVAWNAMISGYAQHGNAD 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 38/214 (17%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K +V+WN +IS Y + ++ AL LFR+M+ + + PD T V+ C+
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN-------- 396
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
H ++ IG + V D V+ + ++D R
Sbjct: 397 ---HAGLVNIGMAY-------------------FESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGK----VEAAREVFDQMPKKSSVSWNAMI 176
G +E A+KL MP R L G + K E A E Q+ +++ + +
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGY 210
N Y + ++ +M N++ + GY
Sbjct: 495 NIYASKNRWEDVARVRKRMKESNVVK----VPGY 524
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 354/618 (57%), Gaps = 19/618 (3%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VSWN +I+ N +A+ ++ M HD+LP FTL + C+ L + G+QIHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG-NVEV 125
LK+G + V ++L+ +YA+ G + RK+F M + D VSWNS+I AR+ ++
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 126 AMKLF------DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSWNAM 175
A+ F + +R F+ G E +++ K + + + NA+
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKNNIADEATTENAL 558
Query: 176 INGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
I Y K G+++ ++F +M R + ++WNSMISGY N +A++L +L+ G
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
+ LSA + +A L G +H+ V+ C + D V+G++L++MYSKCG ++ AL F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK-PHAITFIGVLNACSHKGLVD 353
+ + W ++I G HG ++AL+LF M+ G P +TF+GVL+ACSH GL++
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
EG K F+ M + Y + P +EH+ C+ D+L RAG L + ++ IE MPM+PN +IW ++L +
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 414 --SRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
N E+G+ AA L + +P+ Y LL N+YAA G+W+ + R+ MK+ V K
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXX 531
+AG S V + ++ F+ GDKSHP IY KL+E+++K++ AG+VP T L
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFAL-YDLEQE 917
Query: 532 XXXXXXXXXXXRLAISFGLLNMERRT-PIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LA++F L T PIRIMKNLRVC DCH+ K +S I GR+II+RD
Sbjct: 918 NKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRD 977
Query: 591 NSRFHHFKNGTCSCNDFW 608
++RFHHF++G CSC+DFW
Sbjct: 978 SNRFHHFQDGACSCSDFW 995
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 207/427 (48%), Gaps = 24/427 (5%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQ--EGKQIH 64
VSW I+S Y N +AL+ R M+ + + + V++ C + +V G+QIH
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKW-GEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
G + K+ + D V + L++MY K G +G A F + ++ VSWNS+I Y++ G+
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 124 EVAMKLFDEMP---SRDA-FTWTALLDGLAKCGKVEAAREVFDQM---PKKSSVSWN--- 173
A ++F M SR +T+ +L+ C E + +Q+ +KS + +
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 174 --AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL--LKE 229
+++ + KSG ++ AR++F QM RN ++ N ++ G EA +LF + + +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 230 GLMPSHVTILSALSAVSGLAVLG--NGRWIHSFMVKHCF-DLDGVLGTSLIEMYSKCGSI 286
S+V +LS+ S +G GR +H ++ D +G L+ MY+KCGSI
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 365
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
A VF + +K W ++I GL +G +A+E + MRR + P + T I L++C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ G + + + I V L+ + G+L + + I SMP ++V
Sbjct: 426 ASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVS 483
Query: 407 WMSLLSS 413
W S++ +
Sbjct: 484 WNSIIGA 490
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 198/422 (46%), Gaps = 17/422 (4%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTL-PCVIKGCSRLHA-VQEGKQIH 64
VSWN IIS Y A +F M + P +T V CS V+ +QI
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIM 231
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
+ K G D FV S LV+ +AK G + ARKVF++M R+ V+ N L+ G R E
Sbjct: 232 CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 125 VAMKLFDEMPSR---DAFTWTALLDG-----LAKCGKVEAAREVFDQMPKKSSVSW---- 172
A KLF +M S ++ LL LA+ ++ REV + V +
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 173 -NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N ++N Y K G I AR++F M ++ +SWNSMI+G NG F+EA+E ++ + + +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+P T++S+LS+ + L G+ IH +K DL+ + +L+ +Y++ G +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLA-DQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F ++ W +II L + +A+ F+ +R G K + ITF VL+A S
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+ G + + + I L+ + G + + I M R + V W S+
Sbjct: 532 FGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 411 LS 412
+S
Sbjct: 591 IS 592
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 200/448 (44%), Gaps = 39/448 (8%)
Query: 36 DLLPDGFTLPCVI-KGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL 94
+ +P F CV +G +R H + K D ++ ++L+N Y + G+
Sbjct: 3 NCVPLSFVQSCVGHRGAARF--------FHSRLYKNRLDKDVYLCNNLINAYLETGDSVS 54
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFT-WTALLDGLAKCGK 153
ARKVFD+M R+ VSW ++ GY+RNG + A+ +M F+ A + L C +
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 154 VEA-----AREVFDQMPKKS----SVSWNAMINGYMKS-GKINLARQLFGQMPGRNLISW 203
+ + R++ M K S +V N +I+ Y K G + A FG + +N +SW
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV- 262
NS+IS Y G A +F + +G P+ T S ++ L + R + M
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIMCT 233
Query: 263 --KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
K D +G+ L+ ++K GS+ A VF + + ++VGL ++A
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 321 LELFMEMRR-IGMKPHAITFIGVLNACSHKGLVDE-----GNKCFDMMINEYKIVPTVEH 374
+LFM+M I + P +++ +L++ L +E G + +I + V
Sbjct: 294 TKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 375 YGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL--EIGEYAAHNLIE 432
LV++ + G + A+ + M + + V W S+++ +G + Y + +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 433 ADPDATGCYTLLSNIYAAAG-KWDKVSH 459
P G +TL+S++ + A KW K+
Sbjct: 411 ILP---GSFTLISSLSSCASLKWAKLGQ 435
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/569 (37%), Positives = 335/569 (58%), Gaps = 18/569 (3%)
Query: 56 AVQEGKQIHGYVLKIGFGFD-----KFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVS 109
++ + +QIH + ++ G K + LV++ + M A KVF K+ +V
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKIEKPINVFI 87
Query: 110 WNSLIDGYARNGNVEVAMKLFDEMP-----SRDAFTWTALLDGLAKCGKVEAAREVFDQM 164
WN+LI GYA GN A L+ EM D T+ L+ + V + +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 165 PKKSSVSW----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
+ S N++++ Y G + A ++F +MP ++L++WNS+I+G+ NG+ EA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
L+ + +G+ P TI+S LSA + + L G+ +H +M+K + L+++Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 281 SKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITF 339
++CG +E A +F + +K WT++IVGL ++G +A+ELF M G+ P ITF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+G+L ACSH G+V EG + F M EYKI P +EH+GC+VD+L RAG +++A I+SMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 400 MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSH 459
M+PN VIW +LL + HG+ ++ E+A +++ +P+ +G Y LLSN+YA+ +W V
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 460 VREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
+R+ M GV K G S+VE +++ F++GDKSHPQ+ AIYAKL+EM+ +L+ G+VP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 520 TSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLS 579
S V ++AI+F L++ R+PI ++KNLRVC DCH KL+S
Sbjct: 508 ISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 566
Query: 580 AIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+Y REI+VRD SRFHHFKNG+CSC D+W
Sbjct: 567 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 184/343 (53%), Gaps = 22/343 (6%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
WN +I Y S A L+R+M L+ PD T P +IK + + V+ G+ IH V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
++ GFG +VQ+SL+++YA G++ A KVFDKM ++D+V+WNS+I+G+A NG E A+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 128 KLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGY 179
L+ EM S+ D FT +LL AK G + + V M K ++ S N +++ Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL-LKEGLMPSHVTI 238
+ G++ A+ LF +M +N +SW S+I G +NG EA+ELF+ + EGL+P +T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 239 LSALSAVSGLAVLGNG-----RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
+ L A S ++ G R + ++ + G ++++ ++ G ++ A
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC----MVDLLARAGQVKKAYEYI 383
Query: 294 KAIA-NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
K++ + W ++ +HG D L F ++ + ++P+
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPN 424
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + LV+WN +I+ + N + +AL L+ +M + PDGFT+ ++ C+++ A+ G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++H Y++K+G + + L+++YA+ G + A+ +FD+MVD++ VSW SLI G A N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 121 GNVEVAMKLFDEMPSRDAF-----TWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
G + A++LF M S + T+ +L + CG V+ E F +M ++ +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNG 214
+ M++ ++G++ A + MP + N++ W +++ ++G
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/508 (39%), Positives = 310/508 (61%), Gaps = 4/508 (0%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ +P + N +I + N + A +F +M L D FT P ++K CS +
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL--ARKVFDKMVDRDVVSWNSLIDGYA 118
K +H ++ K+G D +V ++L++ Y++ G +G+ A K+F+KM +RD VSWNS++ G
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV 196
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMING 178
+ G + A +LFDEMP RD +W +LDG A+C ++ A E+F++MP++++VSW+ M+ G
Sbjct: 197 KAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG 256
Query: 179 YMKSGKINLARQLFGQMP--GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
Y K+G + +AR +F +MP +N+++W +I+GY G EA L + ++ GL
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
++S L+A + +L G IHS + + + + +L++MY+KCG+++ A VF I
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
K L W ++ GLG+HG +A+ELF MRR G++P +TFI VL +C+H GL+DEG
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 436
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
F M Y +VP VEHYGCLVD+L R G L++A ++++MPM PN VIW +LL + R
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 496
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
H ++I + NL++ DP G Y+LLSNIYAAA W+ V+ +R MK GV K +G S
Sbjct: 497 HNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKL 504
VE ++ F V DKSHP++ IY L
Sbjct: 557 SVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 181/412 (43%), Gaps = 87/412 (21%)
Query: 51 CSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW 110
C+ L+ V KQ+H +++ D + L++ + + LA +VF+++ + +V
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 111 NSLIDGYARNGNVEVAMKLFDEMP------------------------------------ 134
NSLI +A+N A +F EM
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 135 ---SRDAFTWTALLDGLAKCG--KVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLAR 189
S D + AL+D ++CG V A ++F++M ++ +VSWN+M+ G +K+G++ AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
+LF +MP R+LISWN+M+ GY +A ELFE MP T+
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEK------MPERNTV----------- 248
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK--AIANKKLGHWTAI 307
W ++++ YSK G +E A +F + K + WT I
Sbjct: 249 -----SW-----------------STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I G GL +A L +M G+K A I +L AC+ GL+ G + ++
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL-KRSN 345
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
+ L+D+ + G+L++A ++ +P + + V W ++L HG+
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGH 396
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 145 LDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNL 200
L L KC + +++ Q+ +++ +I+ + NLA ++F Q+ N+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
NS+I + N + +A +F + + GL + T L A SG + L + +H+
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCG--SIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
+ K D + +LI+ YS+CG + A+ +F+ ++ + W +++ GL G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
A LF EM + + I++ +L+ + + + + F+ M + + +
Sbjct: 203 DARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTV-----SWSTM 253
Query: 379 VDILCRAGHLQQAKNIIESMPMRP-NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
V +AG ++ A+ + + MP+ N V W +++ G L+ + ++ +
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/611 (36%), Positives = 341/611 (55%), Gaps = 19/611 (3%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN+ + + ++++ L+R ML PD F+ P ++K C+ L G+Q+H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVS--WNSLIDGYARNGNVEVA 126
K G + FV ++L++MY K G + ARKVF++ +S +N+LI GY N V A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEA----AREVFDQMPK---KSSVS-WNAMING 178
+F M + + GL V R + Q K S V+ N+ I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
YMK G + R+LF +MP + LI+WN++ISGY NG + +EL+E + G+ P T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
+S LS+ + L G + + + F + + + I MY++CG++ A AVF +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKC 358
K L WTA+I GMHG+ + L LF +M + G++P F+ VL+ACSH GL D+G +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
F M EYK+ P EHY CLVD+L RAG L +A IESMP+ P+ +W +LL + + H
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 419 NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
N+++ E A +IE +P+ G Y L+SNIY+ + + + +R MM+ER K G S V
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 479 EHRGKLNRFIVGDKSHPQTKAIYAKLREMSKK-LKLAGHVPDTSQVLXXXXXXXXXXXXX 537
EH+G+++ F+ GD+SH QT+ ++ L E+ ++LAG++ D +
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNM-DCDR-------GEEVSSTT 552
Query: 538 XXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHF 597
RLAI+FG+LN T I ++KNLRVC DCH K +S I R+ +VRD SRFH+F
Sbjct: 553 REHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYF 612
Query: 598 KNGTCSCNDFW 608
K+G CSC D+W
Sbjct: 613 KDGVCSCKDYW 623
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 12/343 (3%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V +N +IS Y N + DA +FR+M + D T+ ++ C+ + G+ +HG
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+K G + V +S + MY K G + R++FD+M + +++WN++I GY++NG
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMING 178
++L+++M S D FT ++L A G + EV + V NA I+
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y + G + AR +F MP ++L+SW +MI Y ++G + LF+ ++K G+ P
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS-LIEMYSKCGSIESALAVFKAIA 297
+ LSA S + G + M + G S L+++ + G ++ A+ +++
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 298 NKKLGH-WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
+ G W A++ +H D A F ++ I +P+ I +
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKV--IEFEPNNIGY 462
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L++WN +IS Y N + D L L+ QM + PD FTL V+ C+ L A + G ++
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
V GF + FV ++ ++MYA+ G + AR VFD M + +VSW ++I Y +G E+
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 126 AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMI 176
+ LFD+M R D + +L + G + E+F M ++ + ++ ++
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 177 NGYMKSGKINLARQLFGQMP 196
+ ++G+++ A + MP
Sbjct: 402 DLLGRAGRLDEAMEFIESMP 421
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 328/575 (57%), Gaps = 34/575 (5%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD 106
++K C+ + +G+ +H ++L+ F D + ++L+NMYAK G + ARKVF+KM RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLA------------- 149
V+W +LI GY+++ A+ F++M S + FT ++++ A
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 150 ---KCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
KCG FD S A+++ Y + G ++ A+ +F + RN +SWN++
Sbjct: 186 FCVKCG--------FDSNVHVGS----ALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
I+G+ +A+ELF+ +L++G PSH + S A S L G+W+H++M+K
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 267 DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFME 326
L G +L++MY+K GSI A +F +A + + W +++ HG +A+ F E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 327 MRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
MRR+G++P+ I+F+ VL ACSH GL+DEG +++M + IVP HY +VD+L RAG
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAG 412
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSN 446
L +A IE MP+ P IW +LL++ R H N E+G YAA ++ E DPD G + +L N
Sbjct: 413 DLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYN 472
Query: 447 IYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLRE 506
IYA+ G+W+ + VR+ MKE GV K+ CS VE ++ F+ D+ HPQ + I K E
Sbjct: 473 IYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEE 532
Query: 507 MSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLR 566
+ K+K G+VPDTS V+ ++A++F LLN + I I KN+R
Sbjct: 533 VLAKIKELGYVPDTSHVI-VHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 567 VCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGT 601
VC DCH KL S + GREIIVRD +RFHHFK+ +
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 179/353 (50%), Gaps = 16/353 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + V+W +IS Y + R DALL F QML P+ FTL VIK + G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+HG+ +K GF + V S+L+++Y ++G M A+ VFD + R+ VSWN+LI G+AR
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 121 GNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SV 170
E A++LF M PS F++ +L + G +E + V M K +
Sbjct: 241 SGTEKALELFQGMLRDGFRPSH--FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+ N +++ Y KSG I+ AR++F ++ R+++SWNS+++ Y +G EA+ FE + + G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P+ ++ LS L+A S +L G + M K + +++++ + G + AL
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 291 AVFKAIANKKLGH-WTAIIVGLGMHG---LADQALELFMEMRRIGMKPHAITF 339
+ + + W A++ MH L A E E+ PH I +
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 338/613 (55%), Gaps = 12/613 (1%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V W I+SCYV N D+L L M +P+ +T +K L A K +HG
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG 271
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+LK + D V L+ +Y + G+M A KVF++M DVV W+ +I + +NG
Sbjct: 272 QILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE 331
Query: 126 AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-----NAMI 176
A+ LF M + FT +++L+G A GK E + K NA+I
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALI 390
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y K K++ A +LF ++ +N +SWN++I GY+ G +A +F L+ + + V
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T SAL A + LA + G +H +K + SLI+MY+KCG I+ A +VF +
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ W A+I G HGL QAL + M+ KP+ +TF+GVL+ CS+ GL+D+G
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
+CF+ MI ++ I P +EHY C+V +L R+G L +A +IE +P P+ +IW ++LS+S N
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN 630
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
N E +A +++ +P Y L+SN+YA A +W V+ +R+ MKE GV K+ G S
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXX 536
+EH+G ++ F VG HP K I L ++ K AG+VPD + VL
Sbjct: 691 WIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVL-LDMDDEEKDKR 749
Query: 537 XXXXXXRLAISFGLLNM-ERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFH 595
RLA+++GL+ M R I IMKNLR+C+DCH+ K++S+I R++++RD +RFH
Sbjct: 750 LWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFH 809
Query: 596 HFKNGTCSCNDFW 608
HF G CSC D W
Sbjct: 810 HFHAGVCSCGDHW 822
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 209/450 (46%), Gaps = 41/450 (9%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHD-----LLPDGFTLPCVIKGCSRLHAVQEG 60
L + N++++ YV DAL LF +M + L G+ I SRLH +EG
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLH--REG 141
Query: 61 KQ------------------------IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLAR 96
+ +H ++K+G+ + FV ++L+N Y+ G + AR
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 97 KVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCG 152
VF+ ++ +D+V W ++ Y NG E ++KL M + +T+ L G
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 153 KVEAAREVFDQMPKKSSV----SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMIS 208
+ A+ V Q+ K V ++ Y + G ++ A ++F +MP +++ W+ MI+
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL 268
+ NG EA++LF + + ++P+ T+ S L+ + G G +H +VK FDL
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D + +LI++Y+KC +++A+ +F +++K W +IVG G +A +F E
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHL 388
R + +TF L AC+ +D G + + I V L+D+ + G +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDI 500
Query: 389 QQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ A+++ M + W +L+S HG
Sbjct: 501 KFAQSVFNEMET-IDVASWNALISGYSTHG 529
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 160/306 (52%), Gaps = 11/306 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K +V W+ +I+ + N N+A+ LF +M ++P+ FTL ++ GC+ G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+HG V+K+GF D +V ++L+++YAK +M A K+F ++ ++ VSWN++I GY
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 121 GNVEVAMKLFDE----MPSRDAFTWTALLDGLAKCGKVEAAREVF-----DQMPKKSSVS 171
G A +F E S T+++ L A ++ +V KK +VS
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N++I+ Y K G I A+ +F +M ++ SWN++ISGY +G +A+ + +++
Sbjct: 488 -NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVK-HCFDLDGVLGTSLIEMYSKCGSIESAL 290
P+ +T L LS S ++ G+ M++ H + T ++ + + G ++ A+
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 291 AVFKAI 296
+ + I
Sbjct: 607 KLIEGI 612
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 180/385 (46%), Gaps = 10/385 (2%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVF 99
D +++ C + + K IH +LK G D F + L+N Y K G A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAARE 159
D+M +R+ VS+ +L GYA + + +L E + +T+ L K E
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 160 VFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGR 215
+ + K ++ A+IN Y G ++ AR +F + ++++ W ++S Y NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 216 FLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
F ++++L + G MP++ T +AL A GL + +H ++K C+ LD +G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L+++Y++ G + A VF + + W+ +I +G ++A++LF+ MR + P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY--GCLVDILCRAGHLQQAKN 393
T +LN C+ G + +++ K+ ++ Y L+D+ + + A
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVV---KVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHG 418
+ + + N+V W +++ N G
Sbjct: 405 LFAELSSK-NEVSWNTVIVGYENLG 428
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 343/610 (56%), Gaps = 12/610 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M L+SWN +++ +V++ RS DAL L M+ + T + C ++G
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HG V+ G +++ + ++LV+MY K GEM +R+V +M RDVV+WN+LI GYA +
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDG------LAKCGKVEAAREVFDQMPKKSSV 170
+ + A+ F M S + T ++L L + GK A V V
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 484
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N++I Y K G ++ ++ LF + RN+I+WN+M++ +G E ++L + G
Sbjct: 485 K-NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ + LSA + LAVL G+ +H VK F+ D + + +MYSKCG I +
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+ N+ L W +I LG HG ++ F EM +G+KP +TF+ +L ACSH G
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LVD+G +DM+ ++ + P +EH C++D+L R+G L +A+ I MPM+PN ++W SL
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L+S + HGNL+ G AA NL + +P+ Y L SN++A G+W+ V +VR+ M + +
Sbjct: 724 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 783
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K CS V+ + K++ F +GD++HPQT IYAKL ++ K +K +G+V DTSQ L
Sbjct: 784 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL-QDTDE 842
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
RLA+++ L++ + +RI KNLR+C+DCH+V K +S + GR I++RD
Sbjct: 843 EQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRD 902
Query: 591 NSRFHHFKNG 600
RFHHF+ G
Sbjct: 903 QYRFHHFERG 912
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 204/429 (47%), Gaps = 9/429 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +VSW ++ Y + + +++ M + + ++ VI C L G
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QI G V+K G V++SL++M G + A +FD+M +RD +SWNS+ YA+N
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
G++E + ++F M ++ T + LL L + R + + K S
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N ++ Y +G+ A +F QMP ++LISWNS+++ + +GR L+A+ L ++ G
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
++VT SAL+A GR +H +V + ++G +L+ MY K G + + V
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
+ + + W A+I G D+AL F MR G+ + IT + VL+AC G +
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
E K I L+ + + G L ++++ + R N + W ++L+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLA 521
Query: 413 SSRNHGNLE 421
++ +HG+ E
Sbjct: 522 ANAHHGHGE 530
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 207/439 (47%), Gaps = 26/439 (5%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAV-QEGKQIHG 65
VSWN ++S V + + FR+M + P F + ++ C R ++ +EG Q+HG
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+V K G D +V ++++++Y +G + +RKVF++M DR+VVSW SL+ GY+ G E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 126 AMKLFDEMPSRD-AFTWTALLDGLAKCG--KVEA-AREVFDQMPKKSSVS----WNAMIN 177
+ ++ M ++ ++ CG K E+ R++ Q+ K S N++I+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
G ++ A +F QM R+ ISWNS+ + Y NG E+ +F ++ + + T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ + LS + + GR IH +VK FD + +L+ MY+ G A VFK +
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
K L W +++ G + AL L M G + +TF L AC ++G
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
+++ + LV + + G + +++ ++ MP R + V W +L
Sbjct: 367 LHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNAL------- 417
Query: 418 GNLEIGEYAAHNLIEADPD 436
IG YA + DPD
Sbjct: 418 ----IGGYAE----DEDPD 428
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 154/329 (46%), Gaps = 23/329 (6%)
Query: 105 RDVVSWNSLIDGYARNGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKV-EAA 157
R+ VSWN+++ G R G M+ F +M PS +F +L+ + G +
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS--SFVIASLVTACGRSGSMFREG 61
Query: 158 REVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
+V + K +S A+++ Y G ++ +R++F +MP RN++SW S++ GY
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
G E +++++ + EG+ + ++ +S+ L GR I +VK + +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
SLI M G+++ A +F ++ + W +I +G +++ +F MRR +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR----AGHLQ 389
++ T +L+ H VD ++ + I+ + + C+ + L R AG
Sbjct: 242 VNSTTVSTLLSVLGH---VD--HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 390 QAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+A + + MP + + + W SL++S N G
Sbjct: 297 EANLVFKQMPTK-DLISWNSLMASFVNDG 324
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 15/234 (6%)
Query: 195 MPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV--SGLAVLG 252
MP RN +SWN+M+SG G +LE ME F + G+ PS I S ++A SG ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG-SMFR 59
Query: 253 NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
G +H F+ K D + T+++ +Y G + + VF+ + ++ + WT+++VG
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE--GNKCFDMMIN---EYK 367
G ++ ++++ MR G+ + + V+++C L DE G + ++ E K
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQVVKSGLESK 177
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
+ VE+ L+ +L G++ A I + M R + + W S+ ++ +G++E
Sbjct: 178 L--AVEN--SLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIE 226
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 332/593 (55%), Gaps = 46/593 (7%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEM--GLARKVFDKMVDRDVVSWNSLIDGYA 118
KQIHG+VL+ G ++ + L+ K G AR+V + + R+ W ++I GYA
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 119 RNGNVEVAMKLFDEMPSRD----AFTWTALL----------------------------- 145
G + A+ ++ M + +FT++ALL
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 146 ------DGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRN 199
D KC ++ AR+VFD+MP++ +SW +I Y + G + A +LF +P ++
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+++W +M++G+ N + EA+E F+ + K G+ VT+ +SA + L
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 260 FMVKHCFDLDG--VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLA 317
K + V+G++LI+MYSKCG++E A+ VF ++ NK + ++++I+GL HG A
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 318 DQALELFMEM-RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+AL LF M + +KP+ +TF+G L ACSH GLVD+G + FD M + + PT +HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
C+VD+L R G LQ+A +I++M + P+ +W +LL + R H N EI E AA +L E +PD
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS-IVEHRGKLNRFIVGDKSHP 495
G Y LLSN+YA+AG W V VR+++KE+G+ K S +V+ G++++F G+ +HP
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Query: 496 QTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMER 555
+ I KL E+ ++L + G+ PD S V +LA++F LL R
Sbjct: 546 MSNKIQDKLEELVERLTVLGYQPDLSSV-PYDVSDNAKRLILIQHTEKLALAFSLLTTNR 604
Query: 556 RTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+ I IMKNLR+C DCH +L S + G+ II+RDN RFHHF++G CSC DFW
Sbjct: 605 DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 51/369 (13%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
W +I Y + ++A+ ++ M ++ P FT ++K C + + G+Q H
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 69 KI-GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
++ GF F +V +++++MY K + ARKVFD+M +RDV+SW LI YAR GN+E A
Sbjct: 177 RLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 128 KLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM----------------------- 164
+LF+ +P++D WTA++ G A+ K + A E FD+M
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 165 ------------------PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
P V +A+I+ Y K G + A +F M +N+ +++SM
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 207 ISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC 265
I G +GR EA+ LF ++ + + P+ VT + AL A S ++ GR + M +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQ-T 414
Query: 266 FDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAIIVGLGMHG---LADQ 319
F + T ++++ + G ++ AL + K ++ + G W A++ +H +A+
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEI 474
Query: 320 ALELFMEMR 328
A E E+
Sbjct: 475 AAEHLFELE 483
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 47/344 (13%)
Query: 130 FDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKI 185
F E+ ++ ++L+ L C + +++ + +K S +I K G
Sbjct: 38 FSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVP 97
Query: 186 --NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
AR++ + RN W ++I GY + G+F EA+ ++ + KE + P T + L
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFDLDGV----LGTSLIEMYSKC---------------- 283
A + L GR H+ F L G +G ++I+MY KC
Sbjct: 158 ACGTMKDLNLGRQFHA----QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER 213
Query: 284 ---------------GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
G++E A +F+++ K + WTA++ G + +ALE F M
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGH 387
+ G++ +T G ++AC+ G ++ + Y V L+D+ + G+
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 388 LQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLI 431
+++A N+ SM + N + S++ HG + + H ++
Sbjct: 334 VEEAVNVFMSMNNK-NVFTYSSMILGLATHGRAQEALHLFHYMV 376
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/609 (35%), Positives = 342/609 (56%), Gaps = 51/609 (8%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGE-------MGLARKVF 99
+++ CS + + K IHG++L+ D FV S L+ + +G A +F
Sbjct: 18 LLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM-PSR---------------------- 136
++ + ++ +N LI ++ A + +M SR
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 137 ----------------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYM 180
D + +L+ A CG + AA +F QM + VSW +M+ GY
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
K G + AR++F +MP RNL +W+ MI+GY N F +A++LFE + +EG++ + ++S
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
+S+ + L L G + ++VK ++ +LGT+L++M+ +CG IE A+ VF+ +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
W++II GL +HG A +A+ F +M +G P +TF VL+ACSH GLV++G + ++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
M ++ I P +EHYGC+VD+L RAG L +A+N I M ++PN I +LL + + + N
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 421 EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEH 480
E+ E + LI+ P+ +G Y LLSNIYA AG+WDK+ +R+MMKE+ V K G S++E
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 481 RGKLNRFIVG-DKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXX 539
GK+N+F +G D+ HP+ I K E+ K++L G+ +T
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAF-FDVDEEEKESSIHM 553
Query: 540 XXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKN 599
+LAI++G++ + T IRI+KNLRVC DCH VTKL+S +YGRE+IVRD +RFHHF+N
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 600 GTCSCNDFW 608
G CSC D+W
Sbjct: 614 GVCSCRDYW 622
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 199/440 (45%), Gaps = 80/440 (18%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ P L +NL+I C+ + A + QML + PD T P +IK S + V G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q H +++ GF D +V++SLV+MYA G + A ++F +M RDVVSW S++ GY +
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--------- 171
G VE A ++FDEMP R+ FTW+ +++G AK E A ++F+ M ++ V+
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 172 ------------------------------WNAMINGYMKSGKINLARQLFGQMPGRNLI 201
A+++ + + G I A +F +P + +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
SW+S+I G ++G +AM F ++ G +P VT + LSA S H +
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS-----------HGGL 365
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
V+ G + E K IE +L H+ I+ LG G +A
Sbjct: 366 VEK--------GLEIYENMKKDHGIEP-----------RLEHYGCIVDMLGRAGKLAEAE 406
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV-- 379
++M +KP+A +L AC + + +M+I K+ P EH G V
Sbjct: 407 NFILKMH---VKPNAPILGALLGACKIYKNTEVAERVGNMLI---KVKP--EHSGYYVLL 458
Query: 380 -DILCRAGHLQQAKNIIESM 398
+I AG + +++ + M
Sbjct: 459 SNIYACAGQWDKIESLRDMM 478
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/569 (36%), Positives = 332/569 (58%), Gaps = 14/569 (2%)
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAK---WGEMGLARKVFDKMVDRDVV 108
S+ ++++E QI Y +K FV + L+N + M AR +F+ M + D+V
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 109 SWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM 164
+NS+ GY+R N LF E+ D +T+ +LL A +E R++ +
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH-CL 154
Query: 165 PKKSSVSWN-----AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
K + N +IN Y + ++ AR +F ++ ++ +N+MI+GY R EA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 220 MELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM 279
+ LF + + L P+ +T+LS LS+ + L L G+WIH + KH F + T+LI+M
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 280 YSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
++KCGS++ A+++F+ + K W+A+IV HG A++++ +F MR ++P ITF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+G+LNACSH G V+EG K F M++++ IVP+++HYG +VD+L RAG+L+ A I+ +P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 400 MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSH 459
+ P ++W LL++ +H NL++ E + + E D G Y +LSN+YA KW+ V
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDS 454
Query: 460 VREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
+R++MK+R +K GCS +E ++ F GD T ++ L EM K+LKL+G+VPD
Sbjct: 455 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Query: 520 TSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLS 579
TS V+ +LAI+FGLLN T IR++KNLRVC DCH KL+S
Sbjct: 515 TSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLIS 574
Query: 580 AIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
I+GR++++RD RFHHF++G CSC DFW
Sbjct: 575 LIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 158/302 (52%), Gaps = 17/302 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +P +V +N + Y + LF ++L +LPD +T P ++K C+ A++EG
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+H +K+G + +V +L+NMY + ++ AR VFD++V+ VV +N++I GYAR
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW---- 172
A+ LF EM + + T ++L A G ++ + + K S +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
A+I+ + K G ++ A +F +M ++ +W++MI Y +G+ ++M +FE + E +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT-----SLIEMYSKCGSIE 287
P +T L L+A S + GR S MV G++ + S++++ S+ G++E
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKF----GIVPSIKHYGSMVDLLSRAGNLE 384
Query: 288 SA 289
A
Sbjct: 385 DA 386
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/552 (36%), Positives = 313/552 (56%), Gaps = 44/552 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ P+L+ +N ++ L LF ++ L PD FTLP V+K RL V EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+++HGY +K G FD +V +SL+ MYA G++ + KVFD+M RDVVSWN LI Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 121 GNVEVAMKLFDEMPSRDAFTW--------------------------------------- 141
G E A+ +F M +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 142 TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
AL+D KCG ++ AR VFD M K+ W +M+ GY+ +G+I+ AR LF + P ++++
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
W +M++GY RF EA+ELF + G+ P + ++S L+ + L G+WIH ++
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
++ +D V+GT+L++MY+KCG IE+AL VF I + WT++I GL M+G++ +AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDI 381
+L+ EM +G++ AITF+ VL AC+H G V EG K F M + + P EH CL+D+
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 382 LCRAGHLQQAKNIIESMPMRPNKV---IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDAT 438
LCRAG L +A+ +I+ M ++ ++ SLLS++RN+GN++I E A L + + +
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 439 GCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDK--SHPQ 496
+TLL+++YA+A +W+ V++VR MK+ G+ K GCS +E G + FIVGD SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 497 TKAIYAKLREMS 508
I + L + +
Sbjct: 546 MDEINSMLHQTT 557
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/613 (35%), Positives = 351/613 (57%), Gaps = 24/613 (3%)
Query: 11 LIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKI 70
L IS N R +ALL ML ++ G+ ++ C A+++G+++H +++K
Sbjct: 25 LPISQLCSNGRLQEALLEM-AMLGPEMGFHGYD--ALLNACLDKRALRDGQRVHAHMIKT 81
Query: 71 GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLF 130
+ ++++ L+ Y K + ARKV D+M +++VVSW ++I Y++ G+ A+ +F
Sbjct: 82 RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 131 DEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN---------AMIN 177
EM D FT+ +L + + +++ + V WN ++++
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI-----VKWNYDSHIFVGSSLLD 196
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K+G+I AR++F +P R+++S ++I+GY G EA+E+F L EG+ P++VT
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
S L+A+SGLA+L +G+ H +++ VL SLI+MYSKCG++ A +F +
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMR-RIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ W A++VG HGL + LELF MR +KP A+T + VL+ CSH + D G
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 357 KCFDMMI-NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
FD M+ EY P EHYGC+VD+L RAG + +A I+ MP +P + SLL + R
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
H +++IGE LIE +P+ G Y +LSN+YA+AG+W V++VR MM ++ V K+ G
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXX 535
S ++H L+ F D++HP+ + + AK++E+S K+K AG+VPD S VL
Sbjct: 497 SWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL-YDVDEEQKEK 555
Query: 536 XXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFH 595
+LA++FGL+ PIR+ KNLR+C DCH K+ S ++ RE+ +RD +RFH
Sbjct: 556 MLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFH 615
Query: 596 HFKNGTCSCNDFW 608
+G CSC D+W
Sbjct: 616 QIVDGICSCGDYW 628
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 197/404 (48%), Gaps = 45/404 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW +IS Y S++AL +F +M+ D P+ FT V+ C R + G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQIHG ++K + FV SSL++MYAK G++ AR++F+ + +RDVVS ++I GYA+
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSW 172
G E A+++F + S + T+ +LL L+ ++ ++ + ++ +V
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG-L 231
N++I+ Y K G ++ AR+LF MP R ISWN+M+ GY +G E +ELF ++ E +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P VT+L+ LS S + G I MV G GT K G+
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA------GEYGT-------KPGT------ 393
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
H+ I+ LG G D+A E ++R+ KP A +L AC
Sbjct: 394 ----------EHYGCIVDMLGRAGRIDEAFEF---IKRMPSKPTAGVLGSLLGACRVHLS 440
Query: 352 VDEGNKCFDMMINEYKIVP-TVEHYGCLVDILCRAGHLQQAKNI 394
VD G +I +I P +Y L ++ AG N+
Sbjct: 441 VDIGESVGRRLI---EIEPENAGNYVILSNLYASAGRWADVNNV 481
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/616 (35%), Positives = 343/616 (55%), Gaps = 16/616 (2%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLH--HDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
+VSWN ++ + ++ + RQML D+ D T+ + C + K++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H Y LK F +++ V ++ V YAK G + A++VF + + V SWN+LI G+A++ +
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 124 EVA------MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWN 173
++ MK+ +P D+FT +LL +K + +EV + + + +
Sbjct: 478 RLSLDAHLQMKISGLLP--DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
++++ Y+ G++ + LF M ++L+SWN++I+GY NG A+ +F ++ G+
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
++++ A S L L GR H++ +KH + D + SLI+MY+K GSI + VF
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
+ K W A+I+G G+HGLA +A++LF EM+R G P +TF+GVL AC+H GL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII-ESMPMRPNKVIWMSLLS 412
EG + D M + + + P ++HY C++D+L RAG L +A ++ E M + IW SLLS
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 413 SSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
S R H NLE+GE A L E +P+ Y LLSN+YA GKW+ V VR+ M E + KD
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 473 AGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXX 532
AGCS +E K+ F+VG++ + I + + K+ G+ PDT V
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV-QHDLSEEE 894
Query: 533 XXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNS 592
+LA+++GL+ T IR+ KNLR+C DCH KL+S + REI+VRDN
Sbjct: 895 KIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNK 954
Query: 593 RFHHFKNGTCSCNDFW 608
RFHHFKNG CSC D+W
Sbjct: 955 RFHHFKNGVCSCGDYW 970
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 181/362 (50%), Gaps = 15/362 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
+ L WN +IS Y N ++ L F +M+ DLLPD FT PCVIK C+ + V
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G +HG V+K G D FV ++LV+ Y G + A ++FD M +R++VSWNS+I ++
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 120 NGNVEVAMKLFDEMPSR--------DAFTWTALLDGLAKCGKVEAAREVFDQMPK----K 167
NG E + L EM D T +L A+ ++ + V K K
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
V NA+++ Y K G I A+ +F +N++SWN+M+ G+ G ++ +L
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 228 K--EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
E + VTIL+A+ + L + + +H + +K F + ++ + + Y+KCGS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+ A VF I +K + W A+I G +L+ ++M+ G+ P + T +L+A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 346 CS 347
CS
Sbjct: 506 CS 507
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 162/350 (46%), Gaps = 27/350 (7%)
Query: 19 NHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL-KIGFGFDKF 77
+ S+DA LL R+ L +++ + ++ G++IH V D
Sbjct: 73 DESSSDAFLLVRE-----------ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDV 121
Query: 78 VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR- 136
+ + ++ MYA G +R VFD + +++ WN++I Y+RN + ++ F EM S
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 137 ----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLA 188
D FT+ ++ A V V + K V NA+++ Y G + A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 189 RQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE----GLMPSHVTILSALSA 244
QLF MP RNL+SWNSMI + NG E+ L +++E MP T+++ L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
+ +G G+ +H + VK D + VL +L++MYSKCG I +A +FK NK + W
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIG--MKPHAITFIGVLNACSHKGLV 352
++ G G ++ +M G +K +T + + C H+ +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 77/358 (21%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ T+ SWN +I + ++ +L QM LLPD FT+ ++ CS+L +++ G
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++HG++++ D FV S++++Y GE+ + +FD M D+ +VSWN++I GY +N
Sbjct: 516 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN 575
Query: 121 GNVEVAMKLFDEM----------------------PS-----------------RDAFTW 141
G + A+ +F +M PS DAF
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 142 TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
+L+D AK G + + +VF+ + +KS+ SWNAMI
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI------------------------- 670
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSF 260
GY ++G EA++LFE + + G P +T L L+A + ++ G R++
Sbjct: 671 ------MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ- 723
Query: 261 MVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANKK--LGHWTAIIVGLGMH 314
+K F L L +I+M + G ++ AL V +++ +G W +++ +H
Sbjct: 724 -MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 137/272 (50%), Gaps = 27/272 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +LVSWN +I+ Y+ N + AL +FRQM+ + + G ++ V CS L +++ G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
++ H Y LK D F+ SL++MYAK G + + KVF+ + ++ SWN++I GY +
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN--- 173
G + A+KLF+EM + D T+ +L G + DQM + N
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 174 --AMINGYMKSGKINLARQLFGQMPGR--NLISWNSMISGYQLNGRFLE-----AMELFE 224
+I+ ++G+++ A ++ + ++ W S++S +++ LE A +LFE
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN-LEMGEKVAAKLFE 795
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
+ E P + +LS L A G G+W
Sbjct: 796 L---EPEKPENYVLLSNLYA-------GLGKW 817
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM- 327
D VL T +I MY+ CGS + + VF A+ +K L W A+I + L D+ LE F+EM
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 328 RRIGMKPHAITFIGVLNACSHKGLVDEG-NKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
+ P T+ V+ AC+ G+ D G ++ + +V V LV G
Sbjct: 179 STTDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ A + + MP R N V W S++ ++G
Sbjct: 237 FVTDALQLFDIMPER-NLVSWNSMIRVFSDNG 267
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/625 (34%), Positives = 349/625 (55%), Gaps = 19/625 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW+ ++S +V N +L LF +M + P+ FT +K C L+A+++G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
QIHG+ LKIGF V +SLV+MY+K G + A KVF ++VDR ++SWN++I G+
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 121 GNVEVAMKLFDEMPSR------DAFTWTALLDGLAKCGKVEAAREVFDQM-------PKK 167
G A+ F M D FT T+LL + G + A +++ + P
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
++++ ++++ Y+K G + AR+ F Q+ + +ISW+S+I GY G F+EAM LF+ L
Sbjct: 247 ATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + S + + A+L G+ + + VK L+ + S+++MY KCG ++
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A F + K + WT +I G G HGL +++ +F EM R ++P + ++ VL+ACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
H G++ EG + F ++ + I P VEHY C+VD+L RAG L++AK++I++MP++PN IW
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+LLS R HG++E+G+ L+ D Y ++SN+Y AG W++ + RE+ +
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLA-GHVPDTSQVL-- 524
G+ K+AG S VE +++ F G+ SHP T I L+E ++L+ G+V L
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHD 605
Query: 525 -XXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYG 583
LA++ G LN + +T IR+ KNLRVC DCH K LS I
Sbjct: 606 IDDESKEENLRAHSEKLAIGLALATGGLNQKGKT-IRVFKNLRVCVDCHEFIKGLSKITK 664
Query: 584 REIIVRDNSRFHHFKNGTCSCNDFW 608
+VRD RFH F++G CSC D+W
Sbjct: 665 IAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 232/479 (48%), Gaps = 69/479 (14%)
Query: 44 LPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV 103
L +++ C+R +G Q+H Y+LK G G + + L++MY K E +A KVFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 104 DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAARE 159
+R+VVSW++L+ G+ NG+++ ++ LF EM + + FT++ L +E +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 160 V--------FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQ 211
+ F+ M + N++++ Y K G+IN A ++F ++ R+LISWN+MI+G+
Sbjct: 129 IHGFCLKIGFEMMVEVG----NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 212 LNGRFLEAMELFEVLLKEGL--MPSHVTILSALSAVSGLAVLGNGRWIHSFMVK---HCF 266
G +A++ F ++ + + P T+ S L A S ++ G+ IH F+V+ HC
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 267 DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFME 326
+ G SL+++Y KCG + SA F I K + W+++I+G G +A+ LF
Sbjct: 245 SSATITG-SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 327 MRRIGMKPHAI---TFIGV------------LNACSHK--------------------GL 351
++ + + + + IGV + A + K GL
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWM 408
VDE KCF M + I TV ++ + G +++ I M + P++V ++
Sbjct: 364 VDEAEKCFAEMQLKDVISWTV-----VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEA---DPDATGCYTLLSNIYAAAGKWDKVSHVREMM 464
++LS+ + G ++ GE L+E P Y + ++ AG+ + H+ + M
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH-YACVVDLLGRAGRLKEAKHLIDTM 476
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 341/621 (54%), Gaps = 20/621 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN +IS Y+ +L+LF++ML PD F+ + CS +++ + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 61 KQIHGYVLK--IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
K+IH + ++ I G D V +S+++MY+K+GE+ A ++F+ M+ R++V+WN +I YA
Sbjct: 251 KEIHCHAVRSRIETG-DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 119 RNGNVEVAMKLFDEMPSRDAFT-----------WTALLDGLAKCGKVEAAREVFDQMPKK 167
RNG V A F +M ++ +A+L+G G A R F +P
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGY--AMRRGF--LPHM 365
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
V A+I+ Y + G++ A +F +M +N+ISWNS+I+ Y NG+ A+ELF+ L
Sbjct: 366 --VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
L+P TI S L A + L GR IH+++VK + + ++ SL+ MY+ CG +E
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A F I K + W +II+ +HG ++ LF EM + P+ TF +L ACS
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
G+VDEG + F+ M EY I P +EHYGC++D++ R G+ AK +E MP P IW
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIW 603
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
SLL++SRNH ++ I E+AA + + + D TGCY LL N+YA AG+W+ V+ ++ +M+ +
Sbjct: 604 GSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXX 527
G+ + + S VE +GK + F GD+SH T IY L +S+ + L
Sbjct: 664 GISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPE 723
Query: 528 XXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREII 587
RLA FGL++ E + + N R+C CH + S + REI+
Sbjct: 724 TLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIV 783
Query: 588 VRDNSRFHHFKNGTCSCNDFW 608
V D+ FHHF NG CSC ++W
Sbjct: 784 VGDSKIFHHFSNGRCSCGNYW 804
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 246/494 (49%), Gaps = 23/494 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M+K WN++I + +A+ + +M+ + D FT P VIK + + +++EG
Sbjct: 90 MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEG 149
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IH V+K+GF D +V +SL+++Y K G A KVF++M +RD+VSWNS+I GY
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLA-----KCGKVEAAREVFDQMPKKSSVS 171
G+ ++ LF EM D F+ + L + K GK V ++ +
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE-G 230
++++ Y K G+++ A ++F M RN+++WN MI Y NGR +A F+ + ++ G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
L P +T ++ L A + L GR IH + ++ F VL T+LI+MY +CG ++SA
Sbjct: 330 LQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F +A K + W +II +G ALELF E+ + P + T +L A +
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+ EG + ++ T+ LV + G L+ A+ + ++ + V W S+
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSI 503
Query: 411 LSSSRNHGNLEIGEYAAHNLIEA--DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
+ + HG I + +I + +P+ + +LL+ + + + M +E G
Sbjct: 504 IMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYG 563
Query: 469 VLKDAGCSIVEHRG 482
+ D G +EH G
Sbjct: 564 I--DPG---IEHYG 572
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 178/365 (48%), Gaps = 24/365 (6%)
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAK 150
A ++FD+M D WN +I G+ G A++ + M D FT+ ++ +A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 151 CGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
+E +++ + K VS N++I+ YMK G A ++F +MP R+++SWNSM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
ISGY G ++ LF+ +LK G P + +SAL A S + G+ IH V+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 267 DL-DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFM 325
+ D ++ TS+++MYSK G + A +F + + + W +I +G A F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 326 EM-RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
+M + G++P IT I +L A + + EG + +P + L+D+
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGE 377
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSS----SRNHGNLEI-GEYAAHNLIEADPDATG 439
G L+ A+ I + M + N + W S++++ +N+ LE+ E +L+ PD+T
Sbjct: 378 CGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLV---PDSTT 433
Query: 440 CYTLL 444
++L
Sbjct: 434 IASIL 438
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
+ G+ S + A QLF +M + WN MI G+ G ++EA++ + ++ G+
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T + +V+G++ L G+ IH+ ++K F D + SLI +Y K G A VF+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ + + W ++I G G +L LF EM + G KP + + L ACSH G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
+ + V ++D+ + G + A+ I M R N V W
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAW-------- 301
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLS 445
N+ IG YA + + DA C+ +S
Sbjct: 302 ---NVMIGCYARNGRV---TDAFLCFQKMS 325
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 333/609 (54%), Gaps = 35/609 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGK 61
+P +N ++ Y + ++++ +F +M+ + PD F+ VIK +++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
Q+H LK G FV ++L+ MY G
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCG------------------------------- 155
Query: 122 NVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMK 181
VE A K+FDEM + W A++ + V ARE+FD+M ++ SWN M+ GY+K
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 182 SGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSA 241
+G++ A+++F +MP R+ +SW++MI G NG F E+ F L + G+ P+ V++
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 242 LSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK- 300
LSA S G+ +H F+ K + + +LI+MYS+CG++ A VF+ + K+
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
+ WT++I GL MHG ++A+ LF EM G+ P I+FI +L+ACSH GL++EG F
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
M Y I P +EHYGC+VD+ R+G LQ+A + I MP+ P ++W +LL + +HGN+
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Query: 421 EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEH 480
E+ E L E DP+ +G LLSN YA AGKW V+ +R+ M + + K S+VE
Sbjct: 456 ELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Query: 481 RGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK-LAGHVPDTSQVLXXXXXXXXXXXXXXX 539
+ +F G+K + KL+E+ +LK AG+ P+ + L
Sbjct: 516 GKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASAL-YDVEEEEKEDQVSK 574
Query: 540 XXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKN 599
+LA++F L + + IRI+KNLR+C DCHAV KL S +YG EI+VRD +RFH FK+
Sbjct: 575 HSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKD 634
Query: 600 GTCSCNDFW 608
G+CSC D+W
Sbjct: 635 GSCSCRDYW 643
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 79/329 (24%)
Query: 1 MHKPTLVSWNLIIS-CY----------------VHNHRS--------------------- 22
MH+P LV+WN +I+ C+ V NH S
Sbjct: 167 MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIF 226
Query: 23 ------------------------NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQ 58
N++ L FR++ + P+ +L V+ CS+ + +
Sbjct: 227 SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFE 286
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD-RDVVSWNSLIDGY 117
GK +HG+V K G+ + V ++L++MY++ G + +AR VF+ M + R +VSW S+I G
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Query: 118 ARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-- 171
A +G E A++LF+EM + D ++ +LL + G +E + F +M + +
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 172 ---WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ M++ Y +SGK+ A QMP I W +++ +G +E E + L
Sbjct: 407 IEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN-IELAEQVKQRL 465
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRW 256
E L P++ L LS A G+W
Sbjct: 466 NE-LDPNNSGDLVLLSNAYATA----GKW 489
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/623 (35%), Positives = 341/623 (54%), Gaps = 29/623 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + VS +IS Y + A+ LF ML P ++K A+ G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QIH +V++ G + +++ +VNMY K G + A++VFD+M + V+ L+ GY +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK---KSSVS-W 172
G A+KLF ++ + D+F ++ +L A ++ +++ + K +S VS
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL-KEGL 231
+++ Y+K A + F ++ N +SW+++ISGY +F EA++ F+ L K
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+ + T S A S LA G +H+ +K ++LI MYSKCG ++ A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF+++ N + WTA I G +G A +AL LF +M GMKP+++TFI VL ACSH GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V++G C D M+ +Y + PT++HY C++DI R+G L +A +++MP P+ + W L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
S H NLE+GE A L + DP+ T Y L N+Y AGKW++ + + ++M ER + K
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLRE----MSKKLKLAGHVPDTSQVLXXX 527
+ CS ++ +GK++RFIVGDK HPQT+ IY KL+E M + Q+L
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQLL--- 680
Query: 528 XXXXXXXXXXXXXXXRLAISFGLLNM--ERRTPIRIMKNLRVCNDCHAVTKLLSAIYGRE 585
RLAI+FGL+++ PI++ KNLR C DCH K +S + G E
Sbjct: 681 -----------DHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHE 729
Query: 586 IIVRDNSRFHHFKNGTCSCNDFW 608
I++RD+ RFHHFK G CSCND+W
Sbjct: 730 IVIRDSRRFHHFKEGKCSCNDYW 752
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 190/416 (45%), Gaps = 24/416 (5%)
Query: 20 HRS-NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDK-- 76
HR N+A ++M + ++ C+ + C L ++ G+ +H ++ G +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD---RMRMGIENPS 117
Query: 77 -FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLF----- 130
+Q+ ++ MY + + A K+FD+M + + VS ++I YA G ++ A+ LF
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 131 --DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGK 184
D+ PS +T LL L ++ R++ + + S ++N Y+K G
Sbjct: 178 SGDKPPSS---MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
+ A+++F QM + ++ ++ GY GR +A++LF L+ EG+ L A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
+ L L G+ IH+ + K + + +GT L++ Y KC S ESA F+ I W
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKP-HAITFIGVLNACSHKGLVDEGNKCFDMMI 363
+AII G ++A++ F +R ++ T+ + ACS + G + I
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
++ + L+ + + G L A + ESM P+ V W + +S +GN
Sbjct: 415 KR-SLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGN 468
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 325/566 (57%), Gaps = 41/566 (7%)
Query: 83 VNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWT 142
++MY+K G+ A V+ +M ++ +S N LI+GY R G++ A K+FDEMP R TW
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 143 ALLDGLAKCGKVEAAREVFDQM------PKK-------------SSVSWNAMINGY---- 179
A++ GL + E +F +M P + SVS I+GY
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 180 ----------------MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
M++GK+ + MP RNL++WN++I G NG + L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
+++ G P+ +T ++ LS+ S LA+ G G+ IH+ +K + +SLI MYSKC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 284 GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGV 342
G + A F ++ W+++I G HG D+A+ELF M + M+ + + F+ +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
L ACSH GL D+G + FDMM+ +Y P ++HY C+VD+L RAG L QA+ II SMP++
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+ VIW +LLS+ H N E+ + +++ DP+ + CY LL+N++A+A +W VS VR+
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 463 MMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQ 522
M+++ V K+AG S EH+G++++F +GD+S ++K IY+ L+E++ ++KL G+ PDT+
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 523 VLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIY 582
VL +LA++F L+ + PIRI+KNLRVC+DCH K +S I
Sbjct: 481 VL-HDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIK 539
Query: 583 GREIIVRDNSRFHHFKNGTCSCNDFW 608
REI +RD SRFHHF NG CSC D+W
Sbjct: 540 NREITLRDGSRFHHFINGKCSCGDYW 565
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 11/341 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M L +WN +I+ + + + L LFR+M PD +TL V G + L +V G
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QIHGY +K G D V SSL +MY + G++ V M R++V+WN+LI G A+N
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSW 172
G E + L+ M + T+ +L + +++ + K
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+++I+ Y K G + A + F + + + W+SMIS Y +G+ EA+ELF + ++ M
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 290
Query: 233 P-SHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ V L+ L A S + G + MV K+ F T ++++ + G ++ A
Sbjct: 291 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 291 AVFKAIANK-KLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
A+ +++ K + W ++ +H A+ A +F E+ +I
Sbjct: 351 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 306/554 (55%), Gaps = 42/554 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH---DLLPDGFTLPCVIKGCSRLHAV 57
+ P + SWN+ I + + ++ LL++QML H + PD FT P + K C+ L
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 58 QEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
G I G+VLK+ V ++ ++M+A G+M ARKVFD+ RD+VSWN LI+GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTW-------------------------------- 141
+ G E A+ ++ M S D T
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 142 ---TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR 198
AL+D +KCG + AR +FD + K++ VSW MI+GY + G ++++R+LF M +
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+++ WN+MI G R +A+ LF+ + P +T++ LSA S L L G WIH
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
++ K+ L+ LGTSL++MY+KCG+I AL+VF I + +TAII GL +HG A
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
A+ F EM G+ P ITFIG+L+AC H G++ G F M + + + P ++HY +
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 379 VDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDAT 438
VD+L RAG L++A ++ESMPM + +W +LL R HGN+E+GE AA L+E DP +
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 439 GCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTK 498
G Y LL +Y A W+ R MM ERGV K GCS +E G + FIV DKS P+++
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 499 AIYAKLREMSKKLK 512
IY +L + + ++
Sbjct: 653 KIYDRLHCLGRHMR 666
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 191/431 (44%), Gaps = 48/431 (11%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYA--KWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
KQI ++ G D F S L+ A + + + K+ + + ++ SWN I G++
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 119 RNGNVEVAMKLFDEM------PSR-DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS--- 168
+ N + + L+ +M SR D FT+ L A + + K
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 169 -SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
S NA I+ + G + AR++F + P R+L+SWN +I+GY+ G +A+ +++++
Sbjct: 190 VSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
EG+ P VT++ +S+ S L L G+ + ++ ++ + L +L++M+SKCG I
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLAD----------------------------- 318
A +F + + + WT +I G GL D
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 319 --QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
AL LF EM+ KP IT I L+ACS G +D G I +Y + V
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGT 428
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD-- 434
LVD+ + G++ +A ++ + R N + + +++ HG+ + +I+A
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 435 PDATGCYTLLS 445
PD LLS
Sbjct: 488 PDEITFIGLLS 498
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/501 (39%), Positives = 296/501 (59%), Gaps = 5/501 (0%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
N +I Y+ + D+ L+R + PD FT + K CS V +G Q+H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
+ GF D +V + +V+MYAK+G+MG AR FD+M R VSW +LI GY R G +++A K
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 129 LFDEMPS-RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINL 187
LFD+MP +D + A++DG K G + +AR +FD+M K+ ++W MI+GY I+
Sbjct: 166 LFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVS 246
AR+LF MP RNL+SWN+MI GY N + E + LF E+ L P VTILS L A+S
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 247 GLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTA 306
L G W H F+ + D + T++++MYSKCG IE A +F + K++ W A
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
+I G ++G A AL+LF+ M I KP IT + V+ AC+H GLV+EG K F +M E
Sbjct: 346 MIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REM 403
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYA 426
+ +EHYGC+VD+L RAG L++A+++I +MP PN +I S LS+ + ++E E
Sbjct: 404 GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERI 463
Query: 427 AHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNR 486
+E +P G Y LL N+YAA +WD V+ +M++ K+ GCS++E ++
Sbjct: 464 LKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSE 523
Query: 487 FIVGDKSHPQTKAIYAKLREM 507
FI GD +HP ++I+ L ++
Sbjct: 524 FISGDTTHPHRRSIHLVLGDL 544
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 171/402 (42%), Gaps = 88/402 (21%)
Query: 92 MGLARKVFDKMVDR-DVVSWNSLIDGYARNGNVEVAMKLFDEMPSR-----DAFTWTAL- 144
+G ARK+FD+ R D NS+I Y + L+ ++ D FT+T L
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 145 ----------------------------------LDGLAKCGKVEAAREVFDQMPKKSSV 170
+D AK GK+ AR FD+MP +S V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPG-RNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
SW A+I+GY++ G+++LA +LF QMP ++++ +N+M+ G+ +G A LF+ +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM--- 202
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+H T+++ W T++I Y I++A
Sbjct: 203 ----THKTVIT---------------W-----------------TTMIHGYCNIKDIDAA 226
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR-RIGMKPHAITFIGVLNACSH 348
+F A+ + L W +I G + + + LF EM+ + P +T + VL A S
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
G + G C + K+ V+ ++D+ + G +++AK I + MP + W
Sbjct: 287 TGALSLGEWCH-CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-QVASWN 344
Query: 409 SLLSSSRNHGNLEIG-EYAAHNLIEADPDATGCYTLLSNIYA 449
+++ +GN + +IE PD T+L+ I A
Sbjct: 345 AMIHGYALNGNARAALDLFVTMMIEEKPDEI---TMLAVITA 383
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 12/206 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M + LVSWN +I Y N + + + LF++M L PD T+ V+ S A+
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ H +V + V +++++MY+K GE+ A+++FD+M ++ V SWN++I GYA
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 120 NGNVEVAMKLF-----DEMPSRDAFTWTALLDGLAKCGKVEAARE---VFDQMPKKSSVS 171
NGN A+ LF +E P D T A++ G VE R+ V +M + +
Sbjct: 353 NGNARAALDLFVTMMIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIE 410
Query: 172 -WNAMINGYMKSGKINLARQLFGQMP 196
+ M++ ++G + A L MP
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMP 436
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 310/543 (57%), Gaps = 46/543 (8%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
+WN ++S + + R +AL F M + + ++ V+ CS L+ + +G Q+H +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K F D ++ S+LV+MY+K G + A++VFD+M DR+VVSWNSLI + +NG A+
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 128 KLFDEM-PSR---------------------------------------DAFTWTALLDG 147
+F M SR D A +D
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 148 LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMI 207
AKC +++ AR +FD MP ++ ++ +MI+GY + AR +F +M RN++SWN++I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 208 SGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD 267
+GY NG EA+ LF +L +E + P+H + + L A + LA L G H ++KH F
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 268 L------DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
D +G SLI+MY KCG +E VF+ + + W A+I+G +G ++AL
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDI 381
ELF EM G KP IT IGVL+AC H G V+EG F M ++ + P +HY C+VD+
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 382 LCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY 441
L RAG L++AK++IE MPM+P+ VIW SLL++ + H N+ +G+Y A L+E +P +G Y
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 442 TLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIY 501
LLSN+YA GKW+ V +VR+ M++ GV K GCS ++ +G + F+V DKSHP+ K I+
Sbjct: 599 VLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIH 658
Query: 502 AKL 504
+ L
Sbjct: 659 SLL 661
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 171/314 (54%), Gaps = 7/314 (2%)
Query: 99 FDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAR 158
F K++D + S S I Y R + V F S + F L+D +KCG +E R
Sbjct: 22 FAKLLDSCIKSKLSAI--YVRYVHASVIKSGF----SNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 159 EVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLE 218
+VFD+MP+++ +WN+++ G K G ++ A LF MP R+ +WNSM+SG+ + R E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 219 AMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIE 278
A+ F ++ KEG + + + S LSA SGL + G +HS + K F D +G++L++
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 279 MYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
MYSKCG++ A VF + ++ + W ++I +G A +AL++F M ++P +T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 339 FIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
V++AC+ + G + ++ K+ + VD+ + +++A+ I +SM
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 399 PMRPNKVIWMSLLS 412
P+R N + S++S
Sbjct: 316 PIR-NVIAETSMIS 328
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 176/358 (49%), Gaps = 71/358 (19%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H V+K GF + F+Q+ L++ Y+K G + R+VFDKM R++ +WNS++ G +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV---------- 170
G ++ A LF MP RD TW +++ G A+ + E A F M K+ V
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 171 -----------------------------SWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
+A+++ Y K G +N A+++F +M RN++
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
SWNS+I+ ++ NG +EA+++F+++L+ + P VT+ S +SA + L+ + G+ +H +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 262 VKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKA------------------------- 295
VK+ D +L + ++MY+KC I+ A +F +
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 296 ------IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
+A + + W A+I G +G ++AL LF ++R + P +F +L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 176/392 (44%), Gaps = 79/392 (20%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +VSWN +I+C+ N + +AL +F+ ML + PD TL VI C+ L A++ G
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 61 KQIHGYVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+++HG V+K D + ++ V+MYAK + AR +FD M R+V++ S+I GYA
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW------- 172
+ + A +F +M R+ +W AL+ G + G+ E A +F + ++S
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 173 --------------------------------------NAMINGYMKSGKINLARQLFGQ 194
N++I+ Y+K G + +F +
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 195 MPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
M R+ +SWN+MI G+ NG EA+ELF +L+ G P H+T++ LSA + G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 255 RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMH 314
R S M + G + + H+T ++ LG
Sbjct: 513 RHYFSSMTRD-------FGVAPLR-----------------------DHYTCMVDLLGRA 542
Query: 315 GLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
G ++A + EM M+P ++ + +L AC
Sbjct: 543 GFLEEAKSMIEEM---PMQPDSVIWGSLLAAC 571
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 128/246 (52%), Gaps = 22/246 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN +I+ Y N + +AL LF + + P ++ ++K C+ L + G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 61 KQIHGYVLKIGFGF------DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLI 114
Q H +VLK GF F D FV +SL++MY K G + VF KM++RD VSWN++I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 115 DGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV 170
G+A+NG A++LF EM D T +L G VE R F M + V
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 171 S-----WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLN-----GRFLEA 219
+ + M++ ++G + A+ + +MP + + + W S+++ +++ G+++ A
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYV-A 584
Query: 220 MELFEV 225
+L EV
Sbjct: 585 EKLLEV 590
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/588 (36%), Positives = 332/588 (56%), Gaps = 26/588 (4%)
Query: 35 HDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL 94
H L D T +IK C AV EG I ++ G F+ + L+NMY K+ +
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYAR----NGNVEVAMKLFDEMPSRDAFTWTALL---DG 147
A ++FD+M R+V+SW ++I Y++ +E+ + + + + +T++++L +G
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 148 LAK-----CGKVEAARE--VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
++ CG ++ E VF + +A+I+ + K G+ A +F +M +
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVR---------SALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
I WNS+I G+ N R A+ELF+ + + G + T+ S L A +GLA+L G H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
+VK +D D +L +L++MY KCGS+E AL VF + + + W+ +I GL +G + +A
Sbjct: 286 IVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVD 380
L+LF M+ G KP+ IT +GVL ACSH GL+++G F M Y I P EHYGC++D
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 381 ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGC 440
+L +AG L A ++ M P+ V W +LL + R N+ + EYAA +I DP+ G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 441 YTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAI 500
YTLLSNIYA + KWD V +R M++RG+ K+ GCS +E +++ FI+GD SHPQ +
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 501 YAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIR 560
KL ++ +L G+VP+T+ VL +LA++FGL+ + IR
Sbjct: 524 SKKLNQLIHRLTGIGYVPETNFVL-QDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIR 582
Query: 561 IMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
I KNLR+C DCH KL S + R I++RD R+HHF++G CSC D+W
Sbjct: 583 IRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 44/353 (12%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SW +IS Y AL L ML ++ P+ +T V++ C+ + V
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H ++K G D FV+S+L++++AK GE A VFD+MV D + WNS+I G+A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 121 GNVEVAMKLFDEMPSRDAF-----TWTALLDGLAKCGKVEAAREVFDQMPK--KSSVSWN 173
+VA++LF M R F T T++L +E + + K + + N
Sbjct: 239 SRSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN 297
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
A+++ Y K G + A ++F QM R++I+W++MISG NG EA++LFE + G P
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
+++TI+ L A S +L +G W + +K + +D V
Sbjct: 358 NYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPV---------------------- 394
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
H+ +I LG G D A++L EM +P A+T+ +L AC
Sbjct: 395 -------REHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGAC 437
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 339/604 (56%), Gaps = 50/604 (8%)
Query: 51 CSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW 110
C+R + K +H +++K+G + ++LVN+Y K G A +VFD+M RD ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 111 NS------------------------------------LIDGYARNGNV----EVAMKLF 130
S L+ A G++ +V
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 131 DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQ 190
+ D ++L+D AKCG + +A+ VFD + K+++SW AM++GY KSG+ A +
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 191 LFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL-SAVSGLA 249
LF +P +NL SW ++ISG+ +G+ LEA +F + +E + +LS++ A + LA
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
GR +H ++ FD + +LI+MY+KC + +A +F + ++ + WT++IV
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
G+ HG A++AL L+ +M G+KP+ +TF+G++ ACSH G V++G + F M +Y I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHN 429
P+++HY CL+D+L R+G L +A+N+I +MP P++ W +LLS+ + G ++G A +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 430 LIEA----DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLN 485
L+ + DP Y LLSNIYA+A W KVS R + E V KD G S VE R +
Sbjct: 433 LVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 486 RFIVGDKSHPQTKAIYAKLREMSKKLKLA-GHVPDTSQVLXXXXXXXXXXXXXXXXXXRL 544
F G+ SHP + I+ L+++ +++++ G+VPDTS +L R
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL-HDMDEQEKEKLLFWHSERS 548
Query: 545 AISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSC 604
A+++GLL TPIRI+KNLRVC DCH V K +S I REIIVRD +R+HHFK G CSC
Sbjct: 549 AVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSC 608
Query: 605 NDFW 608
NDFW
Sbjct: 609 NDFW 612
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 44/286 (15%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDL----------------------------- 37
+SW ++S Y + R +AL LFR + +L
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 38 ---LPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL 94
+ D L ++ C+ L A G+Q+HG V+ +GF F+ ++L++MYAK ++
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAK 150
A+ +F +M RDVVSW SLI G A++G E A+ L+D+M S + T+ L+ +
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 351
Query: 151 CGKVEAAREVFDQMPKKSSVS-----WNAMINGYMKSGKINLARQLFGQMP-GRNLISWN 204
G VE RE+F M K + + +++ +SG ++ A L MP + +W
Sbjct: 352 VGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWA 411
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLM--PSHVTILSALSAVSGL 248
+++S + GR + + + L+ + PS +LS + A + L
Sbjct: 412 ALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 331/592 (55%), Gaps = 15/592 (2%)
Query: 31 QMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWG 90
++L + P T +I C ++ + ++H ++L G D F+ + L+ MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 91 EMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLD 146
+ ARKVFDK R + WN+L G+ E + L+ +M D FT+T +L
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 147 GL--AKC--GKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGR 198
++C + +E+ + ++ S +++ Y + G ++ A +FG MP R
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKE--GLMPSHVTILSALSAVSGLAVLGNGRW 256
N++SW++MI+ Y NG+ EA+ F +++E P+ VT++S L A + LA L G+
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
IH ++++ D + ++L+ MY +CG +E VF + ++ + W ++I G+HG
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+A+++F EM G P +TF+ VL ACSH+GLV+EG + F+ M ++ I P +EHY
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
C+VD+L RA L +A +++ M P +W SLL S R HGN+E+ E A+ L +P
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
G Y LL++IYA A WD+V V+++++ RG+ K G +E R K+ F+ D+ +P
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPL 546
Query: 497 TKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERR 556
+ I+A L ++++ +K G++P T VL +LA++FGL+N +
Sbjct: 547 MEQIHAFLVKLAEDMKEKGYIPQTKGVL-YELETEEKERIVLGHSEKLALAFGLINTSKG 605
Query: 557 TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
PIRI KNLR+C DCH TK +S +EI+VRD +RFH FKNG CSC D+W
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 129/223 (57%), Gaps = 16/223 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHH--DLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
+VSW+ +I+CY N ++ +AL FR+M+ D P+ T+ V++ C+ L A+++GK I
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
HGY+L+ G V S+LV MY + G++ + ++VFD+M DRDVVSWNSLI Y +G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 124 EVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNA 174
+ A+++F+EM S T+ ++L + G VE + +F+ M + + +
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 175 MINGYMKSGKINLARQLFGQM---PGRNLISWNSMISGYQLNG 214
M++ ++ +++ A ++ M PG + W S++ +++G
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKV--WGSLLGSCRIHG 468
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 282/437 (64%), Gaps = 2/437 (0%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N++++ Y G + A ++F +MP ++L++WNS+I+G+ NG+ EA+ L+ + +G+
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P TI+S LSA + + L G+ +H +M+K + L+++Y++CG +E A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFIGVLNACSHKGL 351
F + +K WT++IVGL ++G +A+ELF M G+ P ITF+G+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V EG + F M EYKI P +EH+GC+VD+L RAG +++A I+SMPM+PN VIW +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+ HG+ ++ E+A +++ +P+ +G Y LLSN+YA+ +W V +R+ M GV K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXX 531
G S+VE +++ F++GDKSHPQ+ AIYAKL+EM+ +L+ G+VP S V
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY-VDVEEE 385
Query: 532 XXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDN 591
++AI+F L++ R+PI ++KNLRVC DCH KL+S +Y REI+VRD
Sbjct: 386 EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDR 445
Query: 592 SRFHHFKNGTCSCNDFW 608
SRFHHFKNG+CSC D+W
Sbjct: 446 SRFHHFKNGSCSCQDYW 462
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 161/294 (54%), Gaps = 21/294 (7%)
Query: 57 VQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
V+ G+ IH V++ GFG +VQ+SL+++YA G++ A KVFDKM ++D+V+WNS+I+G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 117 YARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KS 168
+A NG E A+ L+ EM S+ D FT +LL AK G + + V M K ++
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
S N +++ Y + G++ A+ LF +M +N +SW S+I G +NG EA+ELF+ +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 229 -EGLMPSHVTILSALSAVSGLAVLGNG-----RWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
EGL+P +T + L A S ++ G R + ++ + G ++++ ++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC----MVDLLAR 239
Query: 283 CGSIESALAVFKAIA-NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
G ++ A K++ + W ++ +HG D L F ++ + ++P+
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPN 291
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + LV+WN +I+ + N + +AL L+ +M + PDGFT+ ++ C+++ A+ G
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++H Y++K+G + + L+++YA+ G + A+ +FD+MVD++ VSW SLI G A N
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 121 GNVEVAMKLFDEMPSRDAF-----TWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
G + A++LF M S + T+ +L + CG V+ E F +M ++ +
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNG 214
+ M++ ++G++ A + MP + N++ W +++ ++G
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
G IHS +++ F + SL+ +Y+ CG + SA VF + K L W ++I G
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
+G ++AL L+ EM G+KP T + +L+AC+ G + G + MI + + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRNLH 125
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
L+D+ R G +++AK + + M + N V W SL+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 347/653 (53%), Gaps = 67/653 (10%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + + +I+ Y ++R DAL LF +M D++ + +I GC + ++
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVV----SWNSMISGCVECGDMNTAVKL 119
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYA------KWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
FD+ + S+V+ A + G++ A ++F +M +D +WNS++ GY
Sbjct: 120 ----------FDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGY 169
Query: 118 ARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM----PKKSSVSWN 173
+ G V+ A+KLF +MP ++ +WT ++ GL + + A ++F M K +S +
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 174 AMING-----------------------------------YMKSGKINLARQLFGQMPGR 198
+I Y +I +R++F +
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+ W +++SGY LN + +A+ +F +L+ ++P+ T S L++ S L L G+ +H
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
VK + D +G SL+ MYS G++ A++VF I K + W +IIVG HG
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM---INEYKIVPTVEHY 375
A +F +M R+ +P ITF G+L+ACSH G +++G K F M IN I ++HY
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH--IDRKIQHY 467
Query: 376 GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
C+VDIL R G L++A+ +IE M ++PN+++W++LLS+ R H +++ GE AA + D
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
++ Y LLSNIYA+AG+W VS +R MK+ G++K G S V RGK + F GD+ P
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--P 585
Query: 496 QTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMER 555
IY KL + +KLK G+ PD L RLAI+FGL+N
Sbjct: 586 HCSRIYEKLEFLREKLKELGYAPDYRSAL-HDVEDEQKEEMLWYHSERLAIAFGLINTVE 644
Query: 556 RTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+ + +MKNLRVC DCH V KL+S + GREI++RD RFHHFKNGTCSC D+W
Sbjct: 645 GSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 31/294 (10%)
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKV 154
AR+VF+++ V + +I GY R+ + A+ LFDEMP RD +W +++ G +CG +
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM 113
Query: 155 EAAREVFDQMPKKSSVSWNAMIN-------------------------------GYMKSG 183
A ++FD+MP++S VSW AM+N GY++ G
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
K++ A +LF QMPG+N+ISW +MI G N R EA++LF+ +L+ + + ++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH 303
A + G +H ++K F + + SLI Y+ C I + VF ++++
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
WTA++ G ++ + AL +F M R + P+ TF LN+CS G +D G +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 153 KVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQL 212
+++ AREVF+Q+P + MI GY +S ++ A LF +MP R+++SWNSMISG
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 213 NGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN----GRWIHSFMVKHCFDL 268
G A++LF+ MP +++S + V+G G R + VK
Sbjct: 110 CGDMNTAVKLFDE------MPER-SVVSWTAMVNGCFRSGKVDQAERLFYQMPVK----- 157
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D S++ Y + G ++ AL +FK + K + WT +I GL + + +AL+LF M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY--GCLVDILCRAG 386
R +K + F V+ AC++ G + ++I K+ E Y L+
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII---KLGFLYEEYVSASLITFYANCK 274
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLS 412
+ ++ + + + +W +LLS
Sbjct: 275 RIGDSRKVFDE-KVHEQVAVWTALLS 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ K ++VSWN II + R A ++F QM+ + PD T ++ CS +++G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKG 446
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+++ Y+ SS +N +DR + + ++D R
Sbjct: 447 RKLFYYM------------SSGIN-----------------HIDRKIQHYTCMVDILGRC 477
Query: 121 GNVEVAMKLFDEMPSR-DAFTWTALLDGLAKCGKVE----AAREVFDQMPKKSSVSWNAM 175
G ++ A +L + M + + W ALL V+ AA +F+ + KSS ++ +
Sbjct: 478 GKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN-LDSKSSAAYVLL 536
Query: 176 INGYMKSGKINLARQLFGQMPGRNLI-----SW-------NSMISGYQLN-GRFLEAMEL 222
N Y +G+ + +L +M ++ SW + SG Q + R E +E
Sbjct: 537 SNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEF 596
Query: 223 FEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
LKE G P + + L + +L W HS + F L + S + +
Sbjct: 597 LREKLKELGYAPDYRSALHDVEDEQKEEML----WYHSERLAIAFGLINTVEGSAVTVMK 652
Query: 282 KCGSIESALAVFKAIA 297
E V K I+
Sbjct: 653 NLRVCEDCHTVIKLIS 668
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 342/615 (55%), Gaps = 56/615 (9%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGF--GFDKFVQSSLVNMYAKWGEMGLARKVFDK--M 102
+++ C+ ++ GK++H + G ++ ++L YA GEM A+K+FD+ +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR-------------------------- 136
++D V W +L+ ++R G + +MKLF EM +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 137 -------------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSG 183
AL+D KCG V + +F+++ +KS VSW +++ +K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSAL 242
+ R++F +MP RN ++W M++GY G E +EL E++ + G + VT+ S L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 243 SAVSGLAVLGNGRWIHSFMVKH--------CFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
SA + L GRW+H + +K +D D ++GT+L++MY+KCG+I+S++ VF+
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
+ + + W A+ GL MHG +++F +M R +KP +TF VL+ACSH G+VDE
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDE 369
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G +CF + Y + P V+HY C+VD+L RAG +++A+ ++ MP+ PN+V+ SLL S
Sbjct: 370 GWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
HG +EI E LI+ P T L+SN+Y A G+ D +R +++RG+ K G
Sbjct: 429 SVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPG 488
Query: 475 CSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLX-XXXXXXXX 533
S + ++RF GD+SHP+TK IY KL E+ ++++ AG+VPD S ++
Sbjct: 489 LSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEK 548
Query: 534 XXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSR 593
+LA+ FGLL + TP+ + KNLR+C DCH+ K++S +Y REII+RD +R
Sbjct: 549 EQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNR 608
Query: 594 FHHFKNGTCSCNDFW 608
FH FK G+CSC+D+W
Sbjct: 609 FHQFKGGSCSCSDYW 623
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 165/395 (41%), Gaps = 84/395 (21%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V W ++S + +++ LF +M + D ++ C+ C++L + +Q HG
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV 136
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+K+G V ++L++MY K G + +++F+++ ++ VVSW ++D + +E
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN------------- 173
++F EMP R+A WT ++ G G E+ +M + N
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 174 ----------------------------------AMINGYMKSGKINLARQLFGQMPGRN 199
A+++ Y K G I+ + +F M RN
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG-RWIH 258
+++WN++ SG ++G+ +++F +++E + P +T + LSA S ++ G R H
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFH 375
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
S + Y K+ H+ ++ LG GL +
Sbjct: 376 S-----------------LRFYG---------------LEPKVDHYACMVDLLGRAGLIE 403
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
+A L MR + + P+ + +L +CS G V+
Sbjct: 404 EAEIL---MREMPVPPNEVVLGSLLGSCSVHGKVE 435
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 334/620 (53%), Gaps = 25/620 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+VSW +IS N + AL+ F +M ++P+ FT PC K + L GKQIH
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+K G D FV S +MY K ARK+FD++ +R++ +WN+ I +G
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 126 AMKLFDEMPSRD----AFTWTALLD----------GLAKCGKVEAAREVFDQMPKKSSVS 171
A++ F E D + T+ A L+ G+ G V R FD + VS
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV--LRSGFD-----TDVS 245
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N +I+ Y K +I + +F +M +N +SW S+++ Y N +A L+ K+
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ S I S LSA +G+A L GR IH+ VK C + +G++L++MY KCG IE +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM--RRIGMKPHAITFIGVLNACSH 348
F + K L ++I G G D AL LF EM R G P+ +TF+ +L+ACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
G V+ G K FD M + Y I P EHY C+VD+L RAG +++A I+ MP++P +W
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
+L ++ R HG ++G AA NL + DP +G + LLSN +AAAG+W + + VRE +K G
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 469 VLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXX 528
+ K AG S + + +++ F D+SH K I L ++ +++ AG+ PD L
Sbjct: 546 IKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL-YDL 604
Query: 529 XXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIV 588
+LA++FGLL++ PIRI KNLR+C DCH+ K +S REIIV
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664
Query: 589 RDNSRFHHFKNGTCSCNDFW 608
RDN+RFH FK+G CSC D+W
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 150 KCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISG 209
+ G+V AR V N +IN Y K AR + P RN++SW S+ISG
Sbjct: 23 RLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 210 YQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLD 269
NG F A+ F + +EG++P+ T A AV+ L + G+ IH+ VK LD
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 270 GVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR 329
+G S +MY K + A +F I + L W A I G +A+E F+E RR
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 330 IGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQ 389
I P++ITF LNACS ++ G + +++ V L+D + ++
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIR 261
Query: 390 QAKNIIESMPMRPNKVIWMSLLSSS-RNH 417
++ I M + N V W SL+++ +NH
Sbjct: 262 SSEIIFTEMGTK-NAVSWCSLVAAYVQNH 289
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 81/408 (19%)
Query: 60 GKQIHGYVLK-IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G+ +H ++K + F+ + L+NMY+K AR V R+VVSW SLI G A
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLA----------------KCGKV---- 154
+NG+ A+ F EM + FT+ +A KCG++
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 155 ---------------EAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRN 199
+ AR++FD++P+++ +WNA I+
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS---------------------- 182
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
NS+ +GR EA+E F + P+ +T + L+A S L G +H
Sbjct: 183 ----NSVT-----DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHG 233
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
+++ FD D + LI+ Y KC I S+ +F + K W +++ + ++
Sbjct: 234 LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEK 293
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY---- 375
A L++ R+ ++ VL+AC+ ++ G I+ + + VE
Sbjct: 294 ASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS-----IHAHAVKACVERTIFVG 348
Query: 376 GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
LVD+ + G ++ ++ + MP + N V SL+ + G +++
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMA 395
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 318/558 (56%), Gaps = 11/558 (1%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IH VL+ GF + + L+ G+M AR+VFD+M + WN+L GY RN
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 121 GNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSW 172
++ L+ +M D FT+ ++ +++ G + + K +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++ YMK G+++ A LF M ++L++WN+ ++ G A+E F + + +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
T++S LSA L L G I+ K D + ++ + ++M+ KCG+ E+A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F+ + + + W+ +IVG M+G + +AL LF M+ G++P+ +TF+GVL+ACSH GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 353 DEGNKCFDMMI--NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+EG + F +M+ N+ + P EHY C+VD+L R+G L++A I+ MP+ P+ IW +L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L + H ++ +G+ A L+E PD + LLSNIYAAAGKWD V VR M++ G
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K A S VE GK++ F GDKSHPQ+KAIY KL E+ KK++ G+VPDT V
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF-HDVEM 506
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LAI+FGL+ PIR+MKNLR C+DCHA +K +S++ EII+RD
Sbjct: 507 EEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRD 566
Query: 591 NSRFHHFKNGTCSCNDFW 608
+RFHHF+NG CSC +FW
Sbjct: 567 KNRFHHFRNGVCSCKEFW 584
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 205/396 (51%), Gaps = 45/396 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
MHKP + WN + YV N ++LLL+++M + PD FT P V+K S+L G
Sbjct: 69 MHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG 128
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H +V+K GFG V + LV MY K+GE+ A +F+ M +D+V+WN+ + +
Sbjct: 129 FALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSW 172
GN +A++ F++M + D+FT ++L + G +E E++D+ K+ + +
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
NA ++ ++K G AR LF +M RN++SW++MI GY +NG EA+ LF + EGL
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P++VT L LSA S ++ G+ S MV+ S ++E
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ-----------------SNDKNLEP---- 347
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS-HKGL 351
+ H+ ++ LG GL ++A E ++++ ++P + +L AC+ H+ +
Sbjct: 348 -------RKEHYACMVDLLGRSGLLEEAYEF---IKKMPVEPDTGIWGALLGACAVHRDM 397
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLV-DILCRAG 386
+ G K D+++ + P + Y L+ +I AG
Sbjct: 398 I-LGQKVADVLV---ETAPDIGSYHVLLSNIYAAAG 429
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 318/563 (56%), Gaps = 42/563 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLH-AVQEGK 61
+P +V WN +I + + + L+ ML + PD T P ++ G R A+ GK
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
++H +V+K G G + +VQ++LV MY+ G M +AR VFD+ DV SWN +I GY R
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 122 NVEVAMKLFDEMPSRDAFTWT--------------------------------------- 142
E +++L EM R+ + T
Sbjct: 216 EYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 143 -ALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
AL++ A CG+++ A +F M + +SW +++ GY++ G + LAR F QMP R+ I
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
SW MI GY G F E++E+F + G++P T++S L+A + L L G WI +++
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
K+ D V+G +LI+MY KCG E A VF + + WTA++VGL +G +A+
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDI 381
++F +M+ + ++P IT++GVL+AC+H G+VD+ K F M ++++I P++ HYGC+VD+
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 382 LCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY 441
L RAG +++A I+ MPM PN ++W +LL +SR H + + E AA ++E +PD Y
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVY 574
Query: 442 TLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIY 501
LL NIYA +W + VR + + + K G S++E G + F+ GDKSH Q++ IY
Sbjct: 575 ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIY 634
Query: 502 AKLREMSKKLKLAGHVPDTSQVL 524
KL E++++ A ++PDTS++L
Sbjct: 635 MKLEELAQESTFAAYLPDTSELL 657
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 186/402 (46%), Gaps = 46/402 (11%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKW--GEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
KQ+H + G + Q L + G + A K+F K+ + DVV WN++I G++
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 119 R----NGNVEVAMKLFDEMPSRDAFTWTALLDGLAK------CGKVEAAREVFDQMPKKS 168
+ V + + + E + D+ T+ LL+GL + CGK V +
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
V NA++ Y G +++AR +F + ++ SWN MISGY + E++EL + +
Sbjct: 171 YVQ-NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
+ P+ VT+L LSA S + + +H ++ + + L +L+ Y+ CG ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHG---LA---------------------------- 317
A+ +F+++ + + WT+I+ G G LA
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 318 DQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGC 377
+++LE+F EM+ GM P T + VL AC+H G ++ G + I++ KI V
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNA 408
Query: 378 LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
L+D+ + G ++A+ + M R +K W +++ N+G
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQ 449
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 19/312 (6%)
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
KK V W + + G+ ++ A +LF ++P +++ WN+MI G+ E + L+
Sbjct: 70 KKLFVFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 226 LLKEGLMPSHVT---ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
+LKEG+ P T +L+ L G L G+ +H +VK + + +L++MYS
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGG--ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSL 182
Query: 283 CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
CG ++ A VF + + W +I G ++++EL +EM R + P ++T + V
Sbjct: 183 CGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLV 242
Query: 343 LNACSHKGLVDEGNKCFDM--MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
L+ACS V + + C + ++E K P++ LV+ G + A I SM
Sbjct: 243 LSACSK---VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 401 RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHV 460
R + + W S++ GNL++ + D + +T++ + Y AG +++ +
Sbjct: 300 R-DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS---WTIMIDGYLRAGCFNESLEI 355
Query: 461 REMMKERGVLKD 472
M+ G++ D
Sbjct: 356 FREMQSAGMIPD 367
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 337/622 (54%), Gaps = 26/622 (4%)
Query: 10 NLIISCYVHNHRSNDALL-----LFRQMLHHDLLPDGFT--------LPCVIKGCSRLHA 56
N +I C V RSN + L + ++ P ++ + +++ C+R A
Sbjct: 17 NFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGA 76
Query: 57 VQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
V E K HG +++I D + + L+N Y+K G + LAR+VFD M++R +VSWN++I
Sbjct: 77 VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 117 YARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLA-KCGKVEAAREVFDQMPKKSSVS 171
Y RN A+ +F EM + FT +++L C +E + + K+ +
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK--LHCLSVKTCID 194
Query: 172 WN-----AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
N A+++ Y K G I A Q+F M ++ ++W+SM++GY N + EA+ L+
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
+ L + T+ S + A S LA L G+ +H+ + K F + + +S ++MY+KCGS+
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
+ +F + K L W II G H + + LF +M++ GM P+ +TF +L+ C
Sbjct: 315 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
H GLV+EG + F +M Y + P V HY C+VDIL RAG L +A +I+S+P P I
Sbjct: 375 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 434
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
W SLL+S R + NLE+ E AA L E +P+ G + LLSNIYAA +W++++ R+++++
Sbjct: 435 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
Query: 467 RGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXX 526
V K G S ++ + K++ F VG+ HP+ + I + L + K + G+ P L
Sbjct: 495 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHEL-H 553
Query: 527 XXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREI 586
+LA+ FGL+ + +P+RIMKNLR+C DCH K S R I
Sbjct: 554 DVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFI 613
Query: 587 IVRDNSRFHHFKNGTCSCNDFW 608
IVRD +RFHHF +G CSC DFW
Sbjct: 614 IVRDVNRFHHFSDGHCSCGDFW 635
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 167/340 (49%), Gaps = 13/340 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +LVSWN +I Y N ++AL +F +M + FT+ V+ C E
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++H +K + +V ++L+++YAK G + A +VF+ M D+ V+W+S++ GY +N
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
N E A+ L+ ++ FT ++++ + + +++ + K S
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++ ++ Y K G + + +F ++ +NL WN++ISG+ + R E M LFE + ++G+
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFM-VKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P+ VT S LS ++ GR M + + V + ++++ + G + A
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 292 VFKAIA-NKKLGHWTAIIVGLGMHG---LADQALELFMEM 327
+ K+I + W +++ ++ LA+ A E E+
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 329/614 (53%), Gaps = 12/614 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SWN +IS Y N ++ L LF M + PD TL VI C L + G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ IH YV+ GF D V +SL MY G A K+F +M +D+VSW ++I GY N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW---- 172
+ A+ + M D T A+L A G ++ E+ K +S+
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N +IN Y K I+ A +F +P +N+ISW S+I+G +LN R EA+ +F +K L
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQ 495
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P+ +T+ +AL+A + + L G+ IH+ +++ LD L +L++MY +CG + +A +
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F + K + W ++ G G +ELF M + ++P ITFI +L CS +V
Sbjct: 556 FNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+G F M +Y + P ++HY C+VD+L RAG LQ+A I+ MP+ P+ +W +LL+
Sbjct: 615 RQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 413 SSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
+ R H +++GE +A ++ E D + G Y LL N+YA GKW +V+ VR MMKE G+ D
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 473 AGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXX 532
AGCS VE +GK++ F+ DK HPQTK I L +K+ G + S+
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG-LTKISESSSMDETEIS 792
Query: 533 XXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNS 592
R AI+FGL+N PI + KNL +C +CH K +S REI VRD
Sbjct: 793 RDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 852
Query: 593 RFHHFKNGTCSCND 606
FHHFK+G CSC D
Sbjct: 853 HFHHFKDGECSCGD 866
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 199/406 (49%), Gaps = 11/406 (2%)
Query: 19 NHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFV 78
N + +A+ L M + D +++ C A +EG +++ L +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 79 QSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM----- 133
++ + M+ ++G + A VF KM +R++ SWN L+ GYA+ G + AM L+ M
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 134 PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV----SWNAMINGYMKSGKINLAR 189
D +T+ +L + +EV + + NA+I Y+K G + AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
LF +MP R++ISWN+MISGY NG E +ELF + + P +T+ S +SA L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
GR IH++++ F +D + SL +MY GS A +F + K + WT +I
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
G + L D+A++ + M + +KP IT VL+AC+ G +D G + + I +++
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA-RLI 430
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
V L+++ + + +A +I ++P R N + W S+++ R
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLR 475
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 116 GYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAARE--------VFDQMPKK 167
G NG +E AMKL + M + L + + + A+E M
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
NA + +++ G + A +FG+M RNL SWN ++ GY G F EAM L+ +L
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 228 -KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
G+ P T L G+ L G+ +H +V++ ++LD + +LI MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
+SA +F + + + W A+I G +G+ + LELF MR + + P +T V++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
G G +I + L + AG ++A+ + M R + V
Sbjct: 308 ELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVS 365
Query: 407 WMSLLS 412
W +++S
Sbjct: 366 WTTMIS 371
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 330/613 (53%), Gaps = 14/613 (2%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V++N +I+ Y + +++ LF +M P FT V+K LH G+Q+H
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ GF D V + +++ Y+K + R +FD+M + D VS+N +I Y++ E +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 127 MKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NAMING 178
+ F EM R F + +L A ++ R++ Q ++ S N++++
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y K A +F +P R +SW ++ISGY G ++LF + L T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL-GTSLIEMYSKCGSIESALAVFKAIA 297
+ L A + A L G+ +H+F+++ +L+ V G+ L++MY+KCGSI+ A+ VF+ +
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
++ W A+I +G + A+ F +M G++P +++ +GVL ACSH G V++G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
F M Y I P +HY C++D+L R G +A+ +++ MP P++++W S+L++ R H
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 418 GNLEIGEYAAHNLIEADP--DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
N + E AA L + DA Y +SNIYAAAG+W+KV V++ M+ERG+ K
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAA-YVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAY 693
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXX 535
S VE K++ F D++HP I K+ E++ +++ G+ PDTS V+
Sbjct: 694 SWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVV-QDVDEQMKIE 752
Query: 536 XXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFH 595
RLA++F L++ PI +MKNLR C DCHA KL+S I REI VRD SRFH
Sbjct: 753 SLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFH 812
Query: 596 HFKNGTCSCNDFW 608
HF G CSC D+W
Sbjct: 813 HFSEGVCSCGDYW 825
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 222/462 (48%), Gaps = 22/462 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD--LLPDGFTLPCVIKGCSRLHAVQ 58
M T+V+W +++ Y N ++A LFRQM LPD T ++ GC+
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 59 EGKQIHGYVLKIGFGFDKF--VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
Q+H + +K+GF + F V + L+ Y + + LA +F+++ ++D V++N+LI G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 117 YARNGNVEVAMKLFDEM------PSRDAFTWTALLDGLA-----KCGKVEAAREVFDQMP 165
Y ++G ++ LF +M PS FT++ +L + G+ A V
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSD--FTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
+ +SV N +++ Y K ++ R LF +MP + +S+N +IS Y ++ ++ F
Sbjct: 283 RDASVG-NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ G + + LS + L+ L GR +H + D +G SL++MY+KC
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
E A +FK++ + WTA+I G GL L+LF +MR ++ TF VL A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
+ + G + +I + G LVD+ + G ++ A + E MP R N V
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAV 519
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEA--DPDATGCYTLLS 445
W +L+S+ ++G+ E A +IE+ PD+ +L+
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 180/400 (45%), Gaps = 51/400 (12%)
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
+ +++ ++K GF D + +V + G++ ARKV+D+M ++ VS N++I G+
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW------ 172
+ G+V A LFD MP R TWT L+ A+ + A ++F QM + SS +
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 173 -------------------------------------NAMINGYMKSGKINLARQLFGQM 195
N ++ Y + +++LA LF ++
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
P ++ +++N++I+GY+ +G + E++ LF + + G PS T L AV GL G+
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
+H+ V F D +G +++ YSK + +F + + +I
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK--CFDMMINEYKIVPTVE 373
+ +L F EM+ +G F +L+ ++ + G + C ++ I+
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL---- 386
Query: 374 HYG-CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
H G LVD+ + ++A+ I +S+P R V W +L+S
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALIS 425
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 14/221 (6%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
T VSW +IS YV L LF +M +L D T V+K + ++ GKQ+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
++++ G + F S LV+MYAK G + A +VF++M DR+ VSWN+LI +A NG+ E
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM-------PKKSSVSWN 173
A+ F +M D+ + +L + CG VE E F M PKK +
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK--HYA 593
Query: 174 AMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLN 213
M++ ++G+ A +L +MP + I W+S+++ +++
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/569 (35%), Positives = 319/569 (56%), Gaps = 14/569 (2%)
Query: 53 RLHAVQEGKQIHGYVLKIGFGFDKFVQSSLV---NMYAKW-GEMGLARKVFDKMVDRDVV 108
R H + E KQ+H +K+ + +S V ++ W M A +F + D
Sbjct: 39 RCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTF 98
Query: 109 SWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM 164
+N++I GY + E A+ ++EM R D FT+ LL + + +++ Q+
Sbjct: 99 DFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 165 PK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
K N++IN Y + G++ L+ +F ++ + SW+SM+S G + E +
Sbjct: 159 FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 221 ELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM 279
LF + E L ++SAL A + L G IH F++++ +L+ ++ TSL++M
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 280 YSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
Y KCG ++ AL +F+ + + ++A+I GL +HG + AL +F +M + G++P + +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+ VLNACSH GLV EG + F M+ E K+ PT EHYGCLVD+L RAG L++A I+S+P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 400 MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSH 459
+ N VIW + LS R N+E+G+ AA L++ G Y L+SN+Y+ WD V+
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 460 VREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
R + +G+ + G SIVE +GK +RF+ D+SHP+ K IY L +M +LK G+ PD
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPD 518
Query: 520 TSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLS 579
+Q+L ++AI+FGLL + I+I +NLR+C+DCH TK +S
Sbjct: 519 LTQIL-LNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKIS 577
Query: 580 AIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
IY REI+VRD +RFH FK GTCSC D+W
Sbjct: 578 MIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 165/312 (52%), Gaps = 20/312 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +N +I YV+ +AL + +M+ PD FT PC++K C+RL +++EGKQI
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
HG V K+G D FVQ+SL+NMY + GEM L+ VF+K+ + SW+S++ A G
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 124 EVAMKLFDEMPSRDAF--TWTALLDGLAKCGKVEAARE-------VFDQMPKKSSVSWNA 174
+ LF M S + ++ L C A + + + + + +
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ Y+K G ++ A +F +M RN +++++MISG L+G A+ +F ++KEGL P
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS------LIEMYSKCGSIES 288
HV +S L+A S ++ GR + + M+K +G + + L+++ + G +E
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLK-----EGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 289 ALAVFKAIANKK 300
AL ++I +K
Sbjct: 390 ALETIQSIPIEK 401
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
+ T SW+ ++S ++ LLLFR M +L + + + C+ A+
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNL 252
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G IHG++L+ + VQ+SLV+MY K G + A +F KM R+ ++++++I G A
Sbjct: 253 GMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLAL 312
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
+G E A+++F +M D + ++L+ + G V+ R VF +M K+ V
Sbjct: 313 HGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE 372
Query: 172 -WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ +++ ++G + A + +P +N + W + +S R + +EL ++ +E
Sbjct: 373 HYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS----QCRVRQNIELGQIAAQE 428
Query: 230 GL-MPSH 235
L + SH
Sbjct: 429 LLKLSSH 435
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 316/603 (52%), Gaps = 36/603 (5%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N +I N R ++ F ML + PD T P V+K S+L G+ +H LK
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKL 129
D FV+ SLV+M YA+ G ++ A ++
Sbjct: 155 NFVDCDSFVRLSLVDM-------------------------------YAKTGQLKHAFQV 183
Query: 130 FDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKI 185
F+E P R W L++G + + A +F MP+++S SW+ +I GY+ SG++
Sbjct: 184 FEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGEL 243
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
N A+QLF MP +N++SW ++I+G+ G + A+ + +L++GL P+ TI + LSA
Sbjct: 244 NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWT 305
S LG+G IH +++ + LD +GT+L++MY+KCG ++ A VF + +K + WT
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWT 363
Query: 306 AIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE 365
A+I G +HG QA++ F +M G KP + F+ VL AC + VD G FD M +
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 366 YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEY 425
Y I PT++HY +VD+L RAG L +A ++E+MP+ P+ W +L + + H E
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAES 483
Query: 426 AAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLN 485
+ NL+E DP+ G Y L +A+ G V R +++R + G S +E G+LN
Sbjct: 484 VSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLN 543
Query: 486 RFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLA 545
+F GD SH T+ I KL E+ G+ P + +LA
Sbjct: 544 KFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSI-HDIEEEEKENVTGIHSEKLA 602
Query: 546 ISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCN 605
++ G L T IRI+KNLR+C DCH++ K +S I R+I++RD +FHHFK+G CSC
Sbjct: 603 LTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCG 662
Query: 606 DFW 608
D+W
Sbjct: 663 DYW 665
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 10/238 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW +I+ + A+ + +ML L P+ +T+ V+ CS+ A+ G
Sbjct: 253 MPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+IHGY+L G D+ + ++LV+MYAK GE+ A VF M +D++SW ++I G+A +
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH 372
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
G A++ F +M D + A+L +V+ FD M ++
Sbjct: 373 GRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKH 432
Query: 172 WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+ +++ ++GK+N A +L MP +L +W ++ + + + A + + LL+
Sbjct: 433 YVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 83/360 (23%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ K +++ WN++I+ Y + A LFR M P G
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSM------------PERNSGS--------- 229
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
S+L+ Y GE+ A+++F+ M +++VVSW +LI+G+++
Sbjct: 230 ------------------WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQT 271
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAARE----VFDQMPKKSSVSW 172
G+ E A+ + EM + + +T A+L +K G + + + D K
Sbjct: 272 GDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG 331
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
A+++ Y K G+++ A +F M ++++SW +MI G+ ++GRF +A++ F ++ G
Sbjct: 332 TALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEK 391
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIESALA 291
P V L+ L+A C + V LG + + +IE L
Sbjct: 392 PDEVVFLAVLTA--------------------CLNSSEVDLGLNFFDSMRLDYAIEPTLK 431
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC-SHKG 350
H+ ++ LG G ++A EL M + P T+ + AC +HKG
Sbjct: 432 -----------HYVLVVDLLGRAGKLNEAHELVENM---PINPDLTTWAALYRACKAHKG 477
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 33/356 (9%)
Query: 131 DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMI-----NGYMKSGKI 185
D S D + +L+ C + R V Q+ ++ +S + +KS
Sbjct: 22 DRQASPDESHFISLIHA---CKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDY 78
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
+L+ +F RN N++I G N RF ++ F ++L+ G+ P +T L +
Sbjct: 79 SLS--IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA----IANKKL 301
S L GR +H+ +K+ D D + SL++MY+K G ++ A VF+ I + +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
W +I G A LF M + G +++ G ++ + F++
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS----GELNRAKQLFEL 252
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSLLSSSRNHG 418
M + V + L++ + G + A + M ++PN+ ++LS+ G
Sbjct: 253 MPEK-----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Query: 419 NL----EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L I Y N I+ D A G T L ++YA G+ D + V M + +L
Sbjct: 308 ALGSGIRIHGYILDNGIKLD-RAIG--TALVDMYAKCGELDCAATVFSNMNHKDIL 360
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 326/584 (55%), Gaps = 18/584 (3%)
Query: 41 GFTLPC--------VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEM 92
F +PC ++ +R + +G Q+HGYV+K G V ++L+N Y+K
Sbjct: 7 AFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLP 66
Query: 93 GLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS----RDAFTWTALLDGL 148
+R+ F+ + +W+S+I +A+N ++++ +M + D +
Sbjct: 67 FDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSC 126
Query: 149 AKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWN 204
A + + R V K + +++++ Y K G+I AR++F +MP RN+++W+
Sbjct: 127 AILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWS 186
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH 264
M+ GY G EA+ LF+ L E L + + S +S + +L GR IH +K
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKS 246
Query: 265 CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELF 324
FD +G+SL+ +YSKCG E A VF + K LG W A++ H + +ELF
Sbjct: 247 SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELF 306
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
M+ GMKP+ ITF+ VLNACSH GLVDEG FD M E +I PT +HY LVD+L R
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGR 365
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLL 444
AG LQ+A +I +MP+ P + +W +LL+S H N E+ +AA + E P ++G + L
Sbjct: 366 AGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISL 425
Query: 445 SNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKL 504
SN YAA G+++ + R+++++RG K+ G S VE R K++ F G++ H ++K IY KL
Sbjct: 426 SNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKL 485
Query: 505 REMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKN 564
E+ ++++ AG++ DTS VL RLAI+FGL+ PIR+MKN
Sbjct: 486 AELGEEMEKAGYIADTSYVL-REVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKN 544
Query: 565 LRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
LRVC DCH K +S R IIVRDN+RFH F++G CSCND+W
Sbjct: 545 LRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 164/325 (50%), Gaps = 16/325 (4%)
Query: 15 CYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGF 74
C+ N +L ++M+ +L PD LP K C+ L G+ +H +K G+
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 75 DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM- 133
D FV SSLV+MYAK GE+ ARK+FD+M R+VV+W+ ++ GYA+ G E A+ LF E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 134 ---PSRDAFTWTALLDGLAKCGKVEAAREV----FDQMPKKSSVSWNAMINGYMKSGKIN 186
+ + +++++++ A +E R++ SS +++++ Y K G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 187 LARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
A Q+F ++P +NL WN+M+ Y + + +ELF+ + G+ P+ +T L+ L+A S
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 247 GLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA-NKKLGHWT 305
++ GR+ M + + SL++M + G ++ AL V + + W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 306 AIIVGLGMHG-------LADQALEL 323
A++ +H AD+ EL
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFEL 414
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+W+ ++ Y + +AL LF++ L +L + ++ VI C+ ++ G
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QIHG +K F FV SSLV++Y+K G A +VF+++ +++ WN+++ YA++
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
+ + ++LF M + T+ +L+ + G V+ R FDQM K+S +
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKH 355
Query: 172 WNAMINGYMKSGKINLARQLFGQMP 196
+ ++++ ++G++ A ++ MP
Sbjct: 356 YASLVDMLGRAGRLQEALEVITNMP 380
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 317/584 (54%), Gaps = 13/584 (2%)
Query: 35 HDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGL 94
H L + +L +K C +++ + +H V+K F+ LV Y + G
Sbjct: 28 HSLDANVSSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC 84
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDA------FTWTALLDGL 148
A K+FD+M +RD+VSWNSLI GY+ G + ++ M + T+ +++
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 149 AKCGKVEAAREVFDQMPKKSSVSW----NAMINGYMKSGKINLARQLFGQMPGRNLISWN 204
G E R + + K + NA IN Y K+G + + +LF + +NL+SWN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH 264
+MI + NG + + F + + G P T L+ L + + V+ + IH ++
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 265 CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELF 324
F + + T+L+++YSK G +E + VF I + WTA++ HG A++ F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
M G+ P +TF +LNACSH GLV+EG F+ M Y+I P ++HY C+VD+L R
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLL 444
+G LQ A +I+ MPM P+ +W +LL + R + + ++G AA L E +P Y +L
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVML 444
Query: 445 SNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKL 504
SNIY+A+G W S +R +MK++G+++ +GCS +EH K+++F+VGD SHP+++ I KL
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Query: 505 REMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKN 564
+E+ KK+K ++ + ++A++FGLL + PI I KN
Sbjct: 505 KEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKN 564
Query: 565 LRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
LR+C DCH K +S I R II+RD+ RFHHF +G+CSC+D+W
Sbjct: 565 LRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 47/358 (13%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL--LPDGFTLPCVIKGCSRLHAVQ 58
M + LVSWN +IS Y + +M+ ++ P+ T +I C + +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
EG+ IHG V+K G + V ++ +N Y K G++ + K+F+ + +++VSWN++I +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 119 RNGNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREV-----FDQMPKKS 168
+NG E + F+ M R D T+ A+L G V A+ + F
Sbjct: 212 QNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
++ A+++ Y K G++ + +F ++ + ++W +M++ Y +G +A++ FE+++
Sbjct: 271 CIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
G+ P HVT L+A S HS +V+ G E SK I
Sbjct: 330 YGISPDHVTFTHLLNACS-----------HSGLVEE--------GKHYFETMSKRYRI-- 368
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
+ +L H++ ++ LG GL A L EM M+P + + +L AC
Sbjct: 369 ---------DPRLDHYSCMVDLLGRSGLLQDAYGLIKEM---PMEPSSGVWGALLGAC 414
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/614 (30%), Positives = 334/614 (54%), Gaps = 40/614 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP +V+WN ++S Y S DA+ + ++M L P ++ +++ + ++ GK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
IHGY+L+ +D +V+++L++M Y + G
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDM-------------------------------YIKTGY 275
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMING 178
+ A +FD M +++ W +L+ GL+ ++ A + +M K+ +++WN++ +G
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 179 YMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
Y GK A + G+M + N++SW ++ SG NG F A+++F + +EG+ P+
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
T+ + L + L++L +G+ +H F ++ D + T+L++MY K G ++SA+ +F
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
I NK L W +++G M G ++ + F M GM+P AITF VL+ C + GLV E
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G K FD+M + Y I+PT+EH C+VD+L R+G+L +A + I++M ++P+ IW + LSS
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
+ H +LE+ E A L +P + Y ++ N+Y+ +W+ V +R +M+ V
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635
Query: 475 CSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXX 534
S ++ ++ F K+HP IY +L ++ ++K +G+VPDTS +
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS-CIHQDISDSEKE 694
Query: 535 XXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRF 594
+LA+++GL+ + PIR++KN +C+D H V K +S + REI++++ +R
Sbjct: 695 KLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARV 754
Query: 595 HHFKNGTCSCNDFW 608
HHF++G CSCND W
Sbjct: 755 HHFRDGKCSCNDSW 768
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 214/496 (43%), Gaps = 90/496 (18%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K ++WN I+ + + A+ LFR+M T+ +++ CS EG
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+QIHGYVL++G + + +SL+ MY++ G++ L+RKVF+ M DR++ SWNS++ Y +
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSV 170
G V+ A+ L DEM D TW +LL G A G + A V +M P SS+
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 171 S---------------------------W------NAMINGYMKSGKINLARQLFGQMPG 197
S W +I+ Y+K+G + AR +F M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWI 257
+N+++WNS++SG +A L + KEG+ P
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP------------------------ 324
Query: 258 HSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVGLGM 313
D + SL Y+ G E AL V + K + WTAI G
Sbjct: 325 -----------DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
+G AL++F++M+ G+ P+A T +L L+ G + + + ++
Sbjct: 374 NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK-NLICDAY 432
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI--WMSLLSSSRNHGNLEIGEYAAHNLI 431
LVD+ ++G LQ A I + NK + W +L G E G A ++
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGI---KNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 432 EA--DPDATGCYTLLS 445
EA +PDA ++LS
Sbjct: 490 EAGMEPDAITFTSVLS 505
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 52/401 (12%)
Query: 60 GKQIHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G IHG ++K G D V S+ + Y + +G A K+FD+M RD ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALL----------DGLA------------------- 149
R+GN E A++LF EM A + + + +G A
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 150 ----------KCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP--- 196
+ GK+E +R+VF+ M ++ SWN++++ Y K G ++ A L +M
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 197 -GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
++++WNS++SGY G +A+ + + + GL PS +I S L AV+ L G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
IH +++++ D + T+LI+MY K G + A VF + K + W +++ GL
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM--INEYKIVPTVE 373
L A L + M + G+KP AIT+ + + + G + K D++ + E + P V
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG---KPEKALDVIGKMKEKGVAPNVV 362
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLL 411
+ + + G+ + A + M + PN +LL
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 160/388 (41%), Gaps = 52/388 (13%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+A + Y + + A +LF +MP R+ ++WN ++ +G + +A+ELF + G
Sbjct: 27 SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAK 86
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
T++ L S GR IH ++++ + + + SLI MYS+ G +E + V
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKV 146
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F ++ ++ L W +I+ G D A+ L EM G+KP +T+ +L+ + KGL
Sbjct: 147 FNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 353 DEGNKCFDMM---------------------INEYKIVPTVEHY-------------GCL 378
+ M K+ + Y L
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL 266
Query: 379 VDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA--DPD 436
+D+ + G+L A+ + + M + N V W SL+S L+ E + + PD
Sbjct: 267 IDMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD--------AGCSIV-EHRGKLNRF 487
A +L S YA GK +K V MKE+GV + +GCS R L F
Sbjct: 326 AITWNSLASG-YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 488 IVGDKSHPQTKAIYAKLREMSKKLKLAG 515
I Q + + MS LK+ G
Sbjct: 385 I-----KMQEEGVGPNAATMSTLLKILG 407
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 337/623 (54%), Gaps = 20/623 (3%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGC-SRLHAVQEGK 61
+P VS+N +IS Y + A++LF++M DGFTL +I C R+ + K
Sbjct: 102 QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI---K 158
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD-RDVVSWNSLIDGYARN 120
Q+H + + GF V ++ V Y+K G + A VF M + RD VSWNS+I Y ++
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSW 172
A+ L+ EM + D FT ++L+ L + R+ ++ K ++S
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278
Query: 173 NAMINGYMKSGKIN---LARQLFGQMPGRNLISWNSMISGYQLNGRFLE-AMELFEVLLK 228
+ +I+ Y K G + + ++F ++ +L+ WN+MISGY +N E A++ F + +
Sbjct: 279 SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR 338
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIE 287
G P + + SA S L+ + IH +K + + + +LI +Y K G+++
Sbjct: 339 IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQ 398
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A VF + + +I G HG +AL L+ M G+ P+ ITF+ VL+AC+
Sbjct: 399 DARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA 458
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
H G VDEG + F+ M +KI P EHY C++D+L RAG L++A+ I++MP +P V W
Sbjct: 459 HCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAW 518
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+LL + R H N+ + E AA+ L+ P A Y +L+N+YA A KW++++ VR+ M+ +
Sbjct: 519 AALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGK 578
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDT--SQVLX 525
+ K GCS +E + K + F+ D SHP + + L EM KK+K G+V D + V
Sbjct: 579 RIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKE 638
Query: 526 XXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGRE 585
+LA++FGL++ + ++KNLR+C DCH K +SA+ GRE
Sbjct: 639 DEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGRE 698
Query: 586 IIVRDNSRFHHFKNGTCSCNDFW 608
IIVRDN RFH FK+G CSC D+W
Sbjct: 699 IIVRDNLRFHCFKDGKCSCGDYW 721
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 219/485 (45%), Gaps = 82/485 (16%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK +H +K ++ + VN+Y+K G + AR F + +V S+N ++ YA+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK------------- 166
+ + +A +LFDE+P D ++ L+ G A + AA +F +M K
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 167 -------------------------KSSVSWNAMINGYMKSGKINLARQLFGQMPG-RNL 200
SSV+ NA + Y K G + A +F M R+
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVN-NAFVTYYSKGGLLREAVSVFYGMDELRDE 205
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
+SWNSMI Y + +A+ L++ ++ +G T+ S L+A++ L L GR H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIE---SALAVFKAIANKKLGHWTAIIVGLGMH-GL 316
++K F + +G+ LI+ YSKCG + + VF+ I + L W +I G M+ L
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+++A++ F +M+RIG +P +F+ V +ACS+ + + + I + +
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 377 CLVDILCRAGHLQQAKNIIESMP----------------------------------MRP 402
L+ + ++G+LQ A+ + + MP + P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA---DPDATGCYTLLSNIYAAAGKWDKVSH 459
NK+ ++++LS+ + G ++ G+ + + E +P+A Y+ + ++ AGK ++
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH-YSCMIDLLGRAGKLEEAER 504
Query: 460 VREMM 464
+ M
Sbjct: 505 FIDAM 509
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 317/587 (54%), Gaps = 24/587 (4%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGF-----GFDKFVQSSLVNMYAKWGEMGL 94
D L ++ +LH +QIH +L+ F F+ +++ + ++
Sbjct: 11 DDHLLSLIVSSTGKLHL----RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR--DINY 64
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLA-KC-- 151
+ +VF + ++ + N++I ++ + +LF + + L A KC
Sbjct: 65 SCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 152 ------GKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNS 205
G ++ ++F S+ +++ Y A ++F ++P R+ +SWN
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNV 184
Query: 206 MISGYQLNGRFLEAMELFEVLLKE---GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
+ S Y N R + + LF+ + + + P VT L AL A + L L G+ +H F+
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 263 KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
++ L +L+ MYS+CGS++ A VF + + + WTA+I GL M+G +A+E
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 323 LFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN-EYKIVPTVEHYGCLVDI 381
F EM + G+ P T G+L+ACSH GLV EG FD M + E+KI P + HYGC+VD+
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 382 LCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY 441
L RA L +A ++I+SM M+P+ IW +LL + R HG++E+GE +LIE + G Y
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 442 TLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIY 501
LL N Y+ GKW+KV+ +R +MKE+ + GCS +E +G ++ FIV D SHP+ + IY
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 502 AKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRI 561
L E++++LK+AG+V + + L +LAI+FG+L T IR+
Sbjct: 485 KMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRV 544
Query: 562 MKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
KNLR C DCH K +S +Y R +IVRD SRFHHFK G+CSCNDFW
Sbjct: 545 TKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQM---LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
K VSWN++ SCY+ N R+ D L+LF +M + + PDG T ++ C+ L A+
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GKQ+H ++ + G + ++LV+MY++ G M A +VF M +R+VVSW +LI G A
Sbjct: 236 GKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 120 NGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQM 164
NG + A++ F+EM S + T T LL + G V FD+M
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/618 (33%), Positives = 345/618 (55%), Gaps = 14/618 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+WN +I+ + + RS +A+ ++R M+ +++LPD +TL V K S L +E
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 61 KQIHGYVLKIGFGFDK-FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
++ HG + +G FV S+LV+MY K+G+ A+ V D++ ++DVV +LI GY++
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 120 NGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
G A+K F M + +T+ ++L + + + M K + S
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+++ Y++ ++ + ++F + N +SW S+ISG NGR A+ F ++++ +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P+ T+ SAL S LA+ GR IH + K+ FD D G+ LI++Y KCG + A
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF ++ + +I +G +AL+LF M +G++P+ +T + VL AC++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V+EG + FD + KI+ T +HY C+VD+L RAG L++A+ ++ + + P+ V+W +LL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLL 542
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
S+ + H +E+ E ++E +P G L+SN+YA+ GKW++V ++ MK+ + K
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 472 DAGCSIVEHRGKLNRFIVGDK-SHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
+ S VE + + F+ GD SHP ++ I L E+ KK K G+V D S V
Sbjct: 603 NPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF-QDMEE 661
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LAI+F + IRI+KNLRVC DCH+ K++S + REII RD
Sbjct: 662 TAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRD 720
Query: 591 NSRFHHFKNGTCSCNDFW 608
+ RFHHF++G+CSC D+W
Sbjct: 721 SKRFHHFRDGSCSCGDYW 738
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 167/331 (50%), Gaps = 10/331 (3%)
Query: 36 DLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLA 95
D L +++ C ++ K I ++LK GF + S LV+ K G++ A
Sbjct: 60 DTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYA 118
Query: 96 RKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKC 151
R+VFD M +R +V+WNSLI ++ + A++++ M + D +T +++ +
Sbjct: 119 RQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDL 178
Query: 152 G-KVEAARE----VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
+ EA R V + + +A+++ Y+K GK A+ + ++ ++++ ++
Sbjct: 179 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 238
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
I GY G EA++ F+ +L E + P+ T S L + L +GNG+ IH MVK F
Sbjct: 239 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 298
Query: 267 DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFME 326
+ TSL+ MY +C ++ +L VFK I WT++I GL +G + AL F +
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 327 MRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
M R +KP++ T L CS+ + +EG +
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 3/257 (1%)
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ +S + +++ +K G I+ ARQ+F M R++++WNS+I+ + R EA+E++ +++
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSI 286
++P T+ S A S L++ + H V ++ V +G++L++MY K G
Sbjct: 158 TNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
A V + K + TA+IVG G +A++ F M ++P+ T+ VL +C
Sbjct: 218 REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC 277
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ + G +M+ + L+ + R + + + + + PN+V
Sbjct: 278 GNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVS 335
Query: 407 WMSLLSSSRNHGNLEIG 423
W SL+S +G E+
Sbjct: 336 WTSLISGLVQNGREEMA 352
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 302/541 (55%), Gaps = 13/541 (2%)
Query: 80 SSLVNMYAKWGEMGLARKVFDKMVDRDVVS---WNSLIDGYARNGNVEVAMKLFDEM--- 133
S L+ +++ + LARK+FD + D +++ W ++ GY+RNG+ A+ ++ +M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 134 -PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLA 188
F+ + L + R + Q+ K+ V +N ++ YM+SG + A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 189 RQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL 248
R++F M RN+++WNS+IS R E LF + +E + S T+ + L A S +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 249 AVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAII 308
A L G+ IH+ ++K D L SL++MY KCG +E + VF + K L W ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 309 VGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI 368
++G ++ + LF M G+ P ITF+ +L+ CS GL + G F+ M E+++
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 369 VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAH 428
P +EHY CLVDIL RAG +++A +IE+MP +P+ IW SLL+S R HGN+ +GE AA
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 429 NLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFI 488
L +P G Y ++SNIYA A WD V +REMMK+RGV K+AGCS V+ + K+ F+
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFV 590
Query: 489 VGDKSHPQTKAIYAKL-REMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAIS 547
G + Y K+ E+ + ++ +G+ P+TS VL RLA +
Sbjct: 591 AGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVL-HDVDEETKANWVCGHSERLATT 649
Query: 548 FGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDF 607
+ L++ PIRI KNLRVC DCH+ K++S + R I++RD RFHHF +G CSC D+
Sbjct: 650 YSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDY 709
Query: 608 W 608
W
Sbjct: 710 W 710
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 23/370 (6%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
W + Y N DAL+++ ML + P F++ +K C L ++ G+ IH ++
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
K D+ V + L+ +Y + G ARKVFD M +R+VV+WNSLI ++ V
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 129 LFDEMPSR-DAFTWTALLDGLAKCGKVEA---AREVFDQMPK---KSSVS-WNAMINGYM 180
LF +M F+W L L C +V A +E+ Q+ K K V N++++ Y
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
K G++ +R++F M ++L SWN M++ Y +NG E + LFE +++ G+ P +T ++
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 443
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIAN 298
LS S + G + M K F + L L+++ + G I+ A+ V + +
Sbjct: 444 LLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 299 KKLGH-WTAIIVGLGMHGLAD----QALELFMEMRRIGMKPHAI-TFIGVLNACSHKGLV 352
K W +++ +HG A ELF+ ++PH ++ V N + +
Sbjct: 503 KPSASIWGSLLNSCRLHGNVSVGEIAAKELFV------LEPHNPGNYVMVSNIYADAKMW 556
Query: 353 DEGNKCFDMM 362
D +K +MM
Sbjct: 557 DNVDKIREMM 566
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 128/237 (54%), Gaps = 14/237 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+WN +IS R ++ LFR+M + TL ++ CSR+ A+ G
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IH +LK D + +SL++MY K GE+ +R+VFD M+ +D+ SWN +++ YA N
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
GN+E + LF+ M + D T+ ALL G + G E +F++M + VS
Sbjct: 417 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 476
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLIS-WNSMISGYQLNGRF----LEAMELF 223
+ +++ ++GKI A ++ MP + S W S+++ +L+G + A ELF
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 352 bits (902), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 273/467 (58%), Gaps = 32/467 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + N +I Y ++ AL +FR+ML + PD ++ V+K C+ +EG+QI
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
HG +K G D FV+++LVN+ Y R+G
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNV-------------------------------YGRSGYF 191
Query: 124 EVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSG 183
E+A K+ D MP RDA +W +LL + G V+ AR +FD+M +++ SWN MI+GY +G
Sbjct: 192 EIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAG 251
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL-MPSHVTILSAL 242
+ A+++F MP R+++SWN+M++ Y G + E +E+F +L + P T++S L
Sbjct: 252 LVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
SA + L L G W+H ++ KH +++G L T+L++MYSKCG I+ AL VF+A + + +
Sbjct: 312 SACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS 371
Query: 303 HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM 362
W +II L +HGL ALE+F EM G KP+ ITFIGVL+AC+H G++D+ K F+MM
Sbjct: 372 TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Query: 363 INEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEI 422
+ Y++ PT+EHYGC+VD+L R G +++A+ ++ +P ++ SLL + + G LE
Sbjct: 432 SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQ 491
Query: 423 GEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
E A+ L+E + + Y +SN+YA+ G+W+KV R M+ V
Sbjct: 492 AERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERV 538
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 16/291 (5%)
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
++ A + ++ N + NS+I Y + A+ +F +L + P + L A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
+ GR IH +K D + +L+ +Y + G E A V + + W
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM-- 362
+++ GL D+A LF EM ++ G A GLV E + FD M
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAA----GLVKEAKEVFDSMPV 265
Query: 363 ---INEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
++ +V H GC ++ L+ +++ +P+ +S+LS+ + G+
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEV------LEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 420 LEIGEYAAHNLIEADPDATG-CYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
L GE+ + + + G T L ++Y+ GK DK V +R V
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV 370
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 331/618 (53%), Gaps = 12/618 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
M + +VSW ++ Y ++ + L LF+ M + P+ F V K CS ++E
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GKQ HG LK G +FV+++LV MY+ G A +V D + D+ ++S + GY
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTAL-----LDGLAKCGKVEAAREVFDQMPK----KSSV 170
G + + + + + D F W L L + + A +V +M +
Sbjct: 215 CGAFKEGLDVLRKTANED-FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+ A+IN Y K GK+ A+++F +N+ +++ Y + F EA+ LF + +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P+ T L++++ L++L G +H ++K + ++G +L+ MY+K GSIE A
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
F + + + W +I G HGL +ALE F M G P+ ITFIGVL ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
V++G F+ ++ ++ + P ++HY C+V +L +AG + A++ + + P+ + V W +L
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L++ N +G+ A IE P+ +G Y LLSNI+A + +W+ V+ VR +M RGV
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXX 530
K+ G S + R + + F+ D HP+ IYAK++E+ K+K G+ PD +
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAF-HDVDE 632
Query: 531 XXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRD 590
+LA+++GL+ ++P+ + KN+R+C+DCH+ KL+S I R I++RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692
Query: 591 NSRFHHFKNGTCSCNDFW 608
++RFHHF +G CSC D+W
Sbjct: 693 SNRFHHFLDGQCSCCDYW 710
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 16/385 (4%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVL---KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV 103
++K C+ ++ G+ IH +++ + D + +SL+N+Y K E ARK+FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 104 DRDVVSWNSLIDGYARNGNVEVAMKLFDEM----PSR-DAFTWTALLDGLAKCGKVEAAR 158
+R+VVSW +++ GY +G +KLF M SR + F T + + G++E +
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 159 EVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
+ K +S N ++ Y A ++ +P +L ++S +SGY G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
F E +++ E + +++T LS+L S L L +HS MV+ F+ +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+LI MY KCG + A VF + + T I+ ++AL LF +M + P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKN 393
+ TF +LN+ + L+ +G+ +++ Y+ V + LV++ ++G ++ A+
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIEDARK 394
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHG 418
M R + V W +++S +HG
Sbjct: 395 AFSGMTFR-DIVTWNTMISGCSHHG 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 291/524 (55%), Gaps = 34/524 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +P + +N + +V +L L+ +ML + P +T ++K S A + G
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFG 888
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ + ++ K GFGF +Q++L ID Y+
Sbjct: 889 ESLQAHIWKFGFGFHVKIQTTL-------------------------------IDFYSAT 917
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYM 180
G + A K+FDEMP RD WT ++ + +++A + +QM +K+ + N +INGYM
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
G + A LF QMP +++ISW +MI GY N R+ EA+ +F +++EG++P VT+ +
Sbjct: 978 GLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
+SA + L VL G+ +H + +++ F LD +G++L++MYSKCGS+E AL VF + K
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
L W +II GL HG A +AL++F +M +KP+A+TF+ V AC+H GLVDEG + +
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
MI++Y IV VEHYG +V + +AG + +A +I +M PN VIW +LL R H NL
Sbjct: 1158 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 1217
Query: 421 EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD-AGCSIVE 479
I E A + L+ +P +G Y LL ++YA +W V+ +R M+E G+ K G S +
Sbjct: 1218 VIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIR 1277
Query: 480 HRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQV 523
+ + F DKSH + + L E+ ++ LAG+V +T V
Sbjct: 1278 IDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 264/437 (60%), Gaps = 5/437 (1%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK-EGL 231
N +I MK G+ LA+++ +N+I+WN MI GY N ++ EA++ + +L +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P+ + S+L+A + L L + +W+HS M+ +L+ +L ++L+++Y+KCG I ++
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF ++ + W A+I G HGLA +A+ +F EM + P +ITF+G+L CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
++EG + F +M + I P +EHYG +VD+L RAG +++A +IESMP+ P+ VIW SLL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
SSSR + N E+GE A NL +A +G Y LLSNIY++ KW+ VRE+M + G+ K
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXX 531
G S +E G ++RF GD SH +TKAIY L + +K K G V DT VL
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVL-MDVSEE 457
Query: 532 XXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDN 591
+LA+++ +L T IRI KN+R+C+DCH K +S + R II+RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 592 SRFHHFKNGTCSCNDFW 608
RFH F++G CSC D+W
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 128/234 (54%), Gaps = 15/234 (6%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
+++WNL+I YV N + +AL + ML D+ P+ F+ + C+RL + K +H
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVH 188
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
++ G + + S+LV++YAK G++G +R+VF + DV WN++I G+A +G
Sbjct: 189 SLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLAT 248
Query: 125 VAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAM 175
A+++F EM S D+ T+ LL + CG +E +E F M ++ S+ + AM
Sbjct: 249 EAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAM 308
Query: 176 INGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
++ ++G++ A +L MP +++ W S++S + R + EL E+ ++
Sbjct: 309 VDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS----SSRTYKNPELGEIAIQ 358
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS-----R 136
++ K GE GLA+KV D++V++WN +I GY RN E A+K M S
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 137 DAFTWTALLDGLAKCGKVEAAREV----FDQMPKKSSVSWNAMINGYMKSGKINLARQLF 192
+ F++ + L A+ G + A+ V D + +++ +A+++ Y K G I +R++F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 193 GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
+ ++ WN+MI+G+ +G EA+ +F + E + P +T L L+ S +L
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 253 NGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAI 296
G+ M + F + L +++++ + G ++ A + +++
Sbjct: 284 EGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 292/487 (59%), Gaps = 8/487 (1%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
S+N ++S Y + + ++ + + PD FT P V K C + ++EGKQIHG V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K+GF D +VQ+SLV+ Y GE A KVF +M RDVVSW +I G+ R G + A+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 128 KLFDEMPSRDAF-TWTALLDGLAKCGKVEAAREVFDQMPKKSSV----SWNAMINGYMKS 182
F +M T+ +L + G + + + + K++S+ + NA+I+ Y+K
Sbjct: 193 DTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKC 252
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL-LKEGLMPSHVTILSA 241
+++ A ++FG++ ++ +SWNSMISG R EA++LF ++ G+ P + S
Sbjct: 253 EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSV 312
Query: 242 LSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
LSA + L + +GRW+H +++ D +GT++++MY+KCG IE+AL +F I +K +
Sbjct: 313 LSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF-D 360
W A++ GL +HG ++L F EM ++G KP+ +TF+ LNAC H GLVDEG + F
Sbjct: 373 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 432
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
M EY + P +EHYGC++D+LCRAG L +A ++++MP++P+ I ++LS+ +N G L
Sbjct: 433 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 492
Query: 421 -EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVE 479
E+ + + ++ + + +G Y LLSNI+AA +WD V+ +R +MK +G+ K G S +E
Sbjct: 493 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Query: 480 HRGKLNR 486
L++
Sbjct: 553 KFMTLDQ 559
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 22/296 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
+ K VSWN +IS VH RS +A+ LF M + PDG L V+ C+ L AV
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ +H Y+L G +D + +++V+MYAK G + A ++F+ + ++V +WN+L+ G A
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAI 384
Query: 120 NGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS------ 169
+G+ +++ F+EM + T+ A L+ G V+ R F +M +
Sbjct: 385 HGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKL 444
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLE-AMELFEVLL 227
+ MI+ ++G ++ A +L MP + ++ +++S + G +E E+ + L
Sbjct: 445 EHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFL 504
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG---VLGTSLIEMY 280
S V +L LS + N RW ++ + G V G+S IE +
Sbjct: 505 DIEFEDSGVYVL--LSNIFA----ANRRWDDVARIRRLMKVKGISKVPGSSYIEKF 554
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 300/556 (53%), Gaps = 53/556 (9%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + +N +IS + N+ L+ M+ H + PD T ++K S L V KQI
Sbjct: 98 PNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQI 152
Query: 64 HGYVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
H +++ G ++ +SLV Y + G G+A KVF +M DV S+N +I GYA+ G
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 123 VEVAMKLFDEMPSR----DAFT----------------------W--------------- 141
A+KL+ +M S D +T W
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 142 TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
ALLD KC + A+ FD M KK SWN M+ G+++ G + A+ +F QMP R+L+
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 202 SWNSMISGYQLNG---RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
SWNS++ GY G R + + +E+ + E + P VT++S +S + L +GRW+H
Sbjct: 333 SWNSLLFGYSKKGCDQRTVREL-FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
+++ D L ++LI+MY KCG IE A VFK K + WT++I GL HG
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQ 451
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
QAL+LF M+ G+ P+ +T + VL ACSH GLV+EG F+ M +++ P EHYG L
Sbjct: 452 QALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511
Query: 379 VDILCRAGHLQQAKNIIE-SMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDA 437
VD+LCRAG +++AK+I++ MPMRP++ +W S+LS+ R ++E E A L++ +P+
Sbjct: 512 VDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEK 571
Query: 438 TGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDK-SHPQ 496
G Y LLSNIYA G+W RE M+ RGV K AG S V L+RF+ +K +HP+
Sbjct: 572 EGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPR 631
Query: 497 TKAIYAKLREMSKKLK 512
I L+ + ++K
Sbjct: 632 WTEIKRILQHLYNEMK 647
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 176/345 (51%), Gaps = 48/345 (13%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M P + S+N++I Y S +AL L+ +M+ + PD +T+ ++ C L ++ G
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 61 KQIHGYVLKIG--FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
K +HG++ + G + + + ++L++MY K E GLA++ FD M +D+ SWN+++ G+
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCG-KVEAAREVFDQM-------PKKSSV 170
R G++E A +FD+MP RD +W +LL G +K G RE+F +M P + ++
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 171 ----------------SW-----------------NAMINGYMKSGKINLARQLFGQMPG 197
W +A+I+ Y K G I A +F
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWI 257
+++ W SMI+G +G +A++LF + +EG+ P++VT+L+ L+A S ++ G +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 258 HSFMV-KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
+ M K FD + SL+++ + G +E A K I KK+
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA----KDIVQKKM 532
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 64/348 (18%)
Query: 185 INLARQLFGQM-PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
++LA+ LF P N+ +N+MIS + E L+ +++ + P T L +
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 244 AVSGLAVLGNGRWIHS-FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
A S L+ + + IH +V C L L SL++ Y + G+ A VF + + +
Sbjct: 142 ASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 303 HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH-------------- 348
+ +IVG G + +AL+L+ +M G++P T + +L C H
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 349 --------------KGLVDEGNKC---------FDMMINEYKIVPTVEHYGCLVDILCRA 385
L+D KC FD M + + + +V R
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK-----DMRSWNTMVVGFVRL 313
Query: 386 GHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG--NLEIGE--YAAHNLIEADPDATGCY 441
G ++ A+ + + MP R + V W SLL G + E Y + + PD
Sbjct: 314 GDMEAAQAVFDQMPKR-DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 442 TLLS----NIYAAAGKWDKVSHVREMMKERGVLKDA------GCSIVE 479
+L+S N + G+W +R +K L A C I+E
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/569 (34%), Positives = 315/569 (55%), Gaps = 28/569 (4%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYA--KWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
KQ+ + L G F++S L+ A +G++ A ++F + WN++I G+A
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA 79
Query: 119 RNGNVEVAMKLFDEMPSR----------DAFTWTALLDGLAKCGKVEAAREVFDQMPKK- 167
+ + +A + M + DA T + L A+ A ++ Q+ ++
Sbjct: 80 GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRG 139
Query: 168 ---SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFE 224
S+ +++ Y K+G + A +LF +MP R++ SWN++I+G R EAMEL++
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL-GTSLIEMYSKC 283
+ EG+ S VT+++AL A S L + G I H + D V+ + I+MYSKC
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKC 254
Query: 284 GSIESALAVFKAIANKK-LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
G ++ A VF+ KK + W +I G +HG A +ALE+F ++ G+KP ++++
Sbjct: 255 GFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAA 314
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
L AC H GLV+ G F+ M + + ++HYGC+VD+L RAG L++A +II SM M P
Sbjct: 315 LTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP 373
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+ V+W SLL +S + ++E+ E A+ + E + G + LLSN+YAA G+W V VR+
Sbjct: 374 DPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRD 433
Query: 463 MMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQ 522
M+ + V K G S +E +G ++ F DKSH Q + IY K+ E+ K++ G+V T
Sbjct: 434 DMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGL 493
Query: 523 VLXXXXXXXXXXXXXXXXXXRLAISFGLLNM---ERRTPIRIMKNLRVCNDCHAVTKLLS 579
VL +LA+++GL+ M + +P+R++ NLR+C DCH V K +S
Sbjct: 494 VL-HDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHIS 552
Query: 580 AIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
IY REIIVRD RFH FK+G+CSC DFW
Sbjct: 553 KIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP------DGFTLPCVIKGCSRLHA 56
KP WN II + + + A +R ML D T +K C+R
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 57 VQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
Q+H + + G D + ++L++ Y+K G++ A K+FD+M RDV SWN+LI G
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 117 YARNGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW 172
AM+L+ M + R T A L + G V+ +F + +
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS 244
Query: 173 NAMINGYMKSGKINLARQLFGQMPG-RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
NA I+ Y K G ++ A Q+F Q G +++++WN+MI+G+ ++G A+E+F+ L G+
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 232 MPSHVTILSALSAVS-------GLAVLGN 253
P V+ L+AL+A GL+V N
Sbjct: 305 KPDDVSYLAALTACRHAGLVEYGLSVFNN 333
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 290/507 (57%), Gaps = 11/507 (2%)
Query: 25 ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVN 84
+ L +R M + ++P T P ++K +L Q H +++K G D FV++SL++
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFT 140
Y+ G A ++FD D+DVV+W ++IDG+ RNG+ AM F EM + + T
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMINGYMKSGKINLARQLFGQM 195
++L K V R V + V + ++++ Y K + A+++F +M
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
P RN+++W ++I+GY + F + M +FE +LK + P+ T+ S LSA + + L GR
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
+H +M+K+ +++ GT+LI++Y KCG +E A+ VF+ + K + WTA+I G HG
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY 375
A A +LF M + P+ +TF+ VL+AC+H GLV+EG + F M + + P +HY
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 376 GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
C+VD+ R G L++AK +IE MPM P V+W +L S H + E+G+YAA +I+ P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
+G YTLL+N+Y+ + WD+V+ VR+ MK++ V+K G S +E +GKL FI D P
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 496 -QTKAIYAKLREMSKKLKLAGHVPDTS 521
++ +Y L + +++L + D +
Sbjct: 567 LESDDLYKTLDTVGVQMRLPDELEDVT 593
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 175/341 (51%), Gaps = 15/341 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V+W +I +V N +++A++ F +M + + T+ V+K ++ V+ G+ +HG
Sbjct: 169 VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHG 228
Query: 66 YVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
L+ G D F+ SSLV+MY K A+KVFD+M R+VV+W +LI GY ++ +
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 125 VAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSWNAMI 176
M +F+EM D T +++L A G + R V M K S + + +I
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y+K G + A +F ++ +N+ +W +MI+G+ +G +A +LF +L + P+ V
Sbjct: 349 DLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEV 408
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFK 294
T ++ LSA + ++ GR + M K F+++ +++++ + G +E A A+ +
Sbjct: 409 TFMAVLSACAHGGLVEEGRRLFLSM-KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 295 AIANKKLG-HWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+ + W A+ +H D L + R I ++P
Sbjct: 468 RMPMEPTNVVWGALFGSCLLH--KDYELGKYAASRVIKLQP 506
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 9/205 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +V+W +I+ YV + + +L+F +ML D+ P+ TL V+ C+ + A+ G
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+++H Y++K + ++L+++Y K G + A VF+++ +++V +W ++I+G+A +
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA-- 174
G A LF M S + T+ A+L A G VE R +F M + ++ A
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADH 445
Query: 175 ---MINGYMKSGKINLARQLFGQMP 196
M++ + + G + A+ L +MP
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMP 470
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 303/565 (53%), Gaps = 16/565 (2%)
Query: 57 VQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
V++ +Q+H +++ G+G + + + L+ + + +F + D +NS+I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 117 YARNG----NVEVAMKLFDEMPSRDAFTWTALLDGLA-----KCGKVEAAREVFDQMPKK 167
++ V ++ S +T+T+++ A + GK V
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ V A++ Y K G + ARQ+F +MP +++++WNS++SG++ NG EA+++F +
Sbjct: 142 TYVQ-AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ G P T +S LSA + + G W+H +++ DL+ LGT+LI +YS+CG +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR-RIGMKPHAITFIGVLNAC 346
A VF + + WTA+I G HG QA+ELF +M G P+ +TF+ VL+AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV- 405
+H GLV+EG + M Y+++P VEH+ C+VD+L RAG L +A I +
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 406 --IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREM 463
+W ++L + + H N ++G A LI +PD G + +LSNIYA +GK D+VSH+R+
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 464 MKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQV 523
M + K G S++E K F +GD+SH +T IY L + + K G+ P + +V
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 524 LXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYG 583
+ +LA++FGLL I I+KNLR+C DCH+ K +S +
Sbjct: 501 M-HQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSN 558
Query: 584 REIIVRDNSRFHHFKNGTCSCNDFW 608
R+I VRD RFHHF+NG+CSC D+W
Sbjct: 559 RQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 24/324 (7%)
Query: 29 FRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAK 88
+R+ML ++ P +T VIK C+ L A++ GK +H + + GFG D +VQ++LV Y+K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 89 WGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTAL 144
G+M AR+VFD+M ++ +V+WNSL+ G+ +NG + A+++F +M D+ T+ +L
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 145 LDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMINGYMKSGKINLARQLFGQMPGRN 199
L A+ G V V Q + N A+IN Y + G + AR++F +M N
Sbjct: 215 LSACAQTGAVSLGSWV-HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+ +W +MIS Y +G +A+ELF + + G +P++VT ++ LSA + ++ GR ++
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Query: 259 SFMVKHCFDLDGVL-GTSLIEMYSKCGSIESAL-------AVFKAIANKKLGHWTAIIVG 310
M K + GV +++M + G ++ A A KA A WTA++
Sbjct: 334 KRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP---ALWTAMLGA 390
Query: 311 LGMHGLADQALELFMEMRRIGMKP 334
MH D +E+ R I ++P
Sbjct: 391 CKMHRNYDLGVEI--AKRLIALEP 412
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 138/262 (52%), Gaps = 15/262 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++V+WN ++S + N +++A+ +F QM PD T ++ C++ AV G
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H Y++ G + + ++L+N+Y++ G++G AR+VFDKM + +V +W ++I Y +
Sbjct: 228 SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH 287
Query: 121 GNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA- 174
G + A++LF++M P + T+ A+L A G VE R V+ +M K +
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE 347
Query: 175 ----MINGYMKSGKINLARQLFGQMPGRNLIS----WNSMISGYQLNGRFLEAMELFEVL 226
M++ ++G ++ A + Q+ + W +M+ +++ + +E+ + L
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Query: 227 LK-EGLMPSHVTILSALSAVSG 247
+ E P H +LS + A+SG
Sbjct: 408 IALEPDNPGHHVMLSNIYALSG 429
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 335 bits (858), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 313/566 (55%), Gaps = 20/566 (3%)
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+H LK+GF D F + LV Y K E+ ARK+FD+M + +VVSW S+I GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 123 VEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWN 173
+ A+ +F +M + +T+ ++ + + + + ++ +++ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 174 AMINGYMKSGKINLARQLFGQM--PGRNLISWNSMISGYQLNGRFLEAMELFEVL--LKE 229
++++ Y K + AR++F M GRN++SW SMI+ Y N R EA+ELF
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+ + S +SA S L L G+ H + + ++ + V+ TSL++MY+KCGS+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
+F I + +T++I+ HGL + A++LF EM + P+ +T +GVL+ACSH
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK--VIW 407
GLV+EG + +M +Y +VP HY C+VD+L R G + +A + +++ + + ++W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+LLS+ R HG +EI A+ LI+++ T Y LSN YA +G W+ +R MK
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGH-----VPDTSQ 522
G +K+ CS +E++ + F GD S ++ I L+++ K++K GH + TS
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSS 530
Query: 523 VLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIY 582
+ RLA+++GLL++ + IRIM NLR+C DCH KL+S I
Sbjct: 531 SVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIV 590
Query: 583 GREIIVRDNSRFHHFKNGTCSCNDFW 608
REI+VRD +RFH FKNG+C+C D+W
Sbjct: 591 EREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 19/333 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD--LLPDGFTLPCVIKGCSRLHAVQ 58
M +P +VSW +IS Y + +AL +F++M H D + P+ +T V K CS L +
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESR 148
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV--DRDVVSWNSLIDG 116
GK IH + G + V SSLV+MY K ++ AR+VFD M+ R+VVSW S+I
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 117 YARNGNVEVAMKLFDEMPS------RDAFTWTALLDGLAKCGKVEAAREVFDQMPK---- 166
YA+N A++LF + + F +++ + G+++ + + +
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
++V ++++ Y K G ++ A ++F ++ ++IS+ SMI +G A++LF+ +
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGS 285
+ + P++VT+L L A S ++ G S M K+ D T +++M + G
Sbjct: 329 VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGR 388
Query: 286 IESALAVFKAI---ANKKLGHWTAIIVGLGMHG 315
++ A + K I A + W A++ +HG
Sbjct: 389 VDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQM---LHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+VSW +I+ Y N R ++A+ LFR L D + F L VI CS L +Q GK
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR-ANQFMLASVISACSSLGRLQWGKV 257
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
HG V + G+ + V +SL++MYAK G + A K+F ++ V+S+ S+I A++G
Sbjct: 258 AHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGL 317
Query: 123 VEVAMKLFDEM-PSRDAFTWTALLDGLAKC---GKVEAAREVFDQMPKKSSV-----SWN 173
E A+KLFDEM R + LL L C G V E M +K V +
Sbjct: 318 GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT 377
Query: 174 AMINGYMKSGKINLARQLFGQM---PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+++ + G+++ A +L + + + W +++S +L+GR E + L++
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
Query: 231 LMPSHVTI-LSALSAVSG 247
+ I LS AVSG
Sbjct: 438 QQVTSAYIALSNAYAVSG 455
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 300/524 (57%), Gaps = 13/524 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
+ KP +V+W+ ++S + N A+ FR+M + D+ PD TL ++ C++L +
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ +HG+V++ GF D + +SL+N YAK A +F + ++DV+SW+++I Y +
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 120 NGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SV 170
NG A+ +F++M + T +L A +E R+ + +K V
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV-LLKE 229
S A+++ YMK A +F ++P ++++SW ++ISG+ LNG ++E F + LL+
Sbjct: 302 S-TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
P + ++ L + S L L + HS+++K+ FD + +G SL+E+YS+CGS+ +A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSH 348
VF IA K WT++I G G+HG +ALE F M + +KP+ +TF+ +L+ACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
GL+ EG + F +M+N+Y++ P +EHY LVD+L R G L A I + MP P I
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
+LL + R H N E+ E A L E + + G Y L+SN+Y G+W+ V +R +K+RG
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 469 VLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
+ K S++E R K++RF+ D+ HP+ + +Y L+E+ +K
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 215/429 (50%), Gaps = 13/429 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K +L WN ++ + + L F M + PD FTLP +K C L V G
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 79
Query: 61 KQIHGYVLK-IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+ IHG+V K + G D +V SSL+ MY K G M A ++FD++ D+V+W+S++ G+ +
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 120 NGNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
NG+ A++ F M + D T L+ K R V + ++ +
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N+++N Y KS A LF + +++ISW+++I+ Y NG EA+ +F ++ +G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P+ T+L L A + L GR H ++ + + + T+L++MY KC S E A
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELF-MEMRRIGMKPHAITFIGVLNACSHK 349
AVF I K + W A+I G ++G+A +++E F + + +P AI + VL +CS
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G +++ KCF + +Y LV++ R G L A + + ++ + V+W S
Sbjct: 380 GFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTS 437
Query: 410 LLSSSRNHG 418
L++ HG
Sbjct: 438 LITGYGIHG 446
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
ARQ+FG+M R+L WN+++ ++ E + F + ++ P + T+ AL A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 248 LAVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTA 306
L + G IH F+ K D +G+SLI MY KCG + AL +F + + W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 307 IIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACS 347
++ G +G QA+E F M + P +T I +++AC+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 292/504 (57%), Gaps = 41/504 (8%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP + N ++ + + + L+ +M + PD +T V+K CS+L G
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
HG V++ GF +++V+++L+ +A G++G
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLG----------------------------- 164
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKS 182
+A +LFD+ W+++ G AK GK++ A +FD+MP K V+WN MI G +K
Sbjct: 165 --IASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKC 222
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
+++ AR+LF + +++++WN+MISGY G EA+ +F+ + G P VTILS L
Sbjct: 223 KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLL 282
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGT----SLIEMYSKCGSIESALAVFKAIA 297
SA + L L G+ +H ++++ + +GT +LI+MY+KCGSI+ A+ VF+ +
Sbjct: 283 SACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK 342
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
++ L W +IVGL +H A+ ++E+F EM+R+ + P+ +TFIGV+ ACSH G VDEG K
Sbjct: 343 DRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
F +M + Y I P ++HYGC+VD+L RAG L++A +ESM + PN ++W +LL + + +
Sbjct: 402 YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIY 461
Query: 418 GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
GN+E+G+YA L+ D +G Y LLSNIYA+ G+WD V VR+M + V K G S+
Sbjct: 462 GNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSL 521
Query: 478 VEHRGK--LNRFIVGDKSHPQTKA 499
+E + R+++ S P++++
Sbjct: 522 IEEDDDKLMMRYLLS--SEPESRS 543
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 18/294 (6%)
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
G + A +LF ++P ++ N ++ G + + + + L+ + K G+ P T L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
A S L NG H +V+H F L+ + +LI ++ CG + A +F A
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 303 HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM 362
W+++ G G D+A+ LF EM + G L C +D + FD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLK-CKE---MDSARELFDRF 235
Query: 363 INEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGN 419
+ V + ++ G+ ++A I + M P+ V +SLLS+ G+
Sbjct: 236 TEK-----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 420 LEIGEYAAHNLIEADPDATGCYT------LLSNIYAAAGKWDKVSHVREMMKER 467
LE G+ ++E ++ Y L ++YA G D+ V +K+R
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 310/581 (53%), Gaps = 45/581 (7%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V+W +++ Y N + A+ FR + + +T P V+ C+ + A + G Q+H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
++K GF + +VQS+L++MYAK EM AR + + M DVVSWNS+I G R G + A
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 127 MKLFDEMPSRDA----FTWTALLDGLAKC-GKVEAAREVFDQMPKKSSVSW----NAMIN 177
+ +F M RD FT ++L+ A +++ A + K ++ NA+++
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K G ++ A ++F M +++ISW ++++G NG + EA++LF + G+ P +
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
S LSA + L +L G+ +H +K F + SL+ MY+KCGS+E A +F ++
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ L WT +IVG + GL+++ +
Sbjct: 493 IRDLITWTCLIVGY-----------------------------------AKNGLLEDAQR 517
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
FD M Y I P EHY C++D+ R+G + + ++ M + P+ +W ++L++SR H
Sbjct: 518 YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKH 577
Query: 418 GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
GN+E GE AA L+E +P+ Y LSN+Y+AAG+ D+ ++VR +MK R + K+ GCS
Sbjct: 578 GNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSW 637
Query: 478 VEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXX 537
VE +GK++ F+ D+ HP+ IY+K+ EM +K AG+ D S L
Sbjct: 638 VEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFAL-HDLDKEGKELGL 696
Query: 538 XXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLL 578
+LA++FGLL + PIRI+KNLRVC DCH+ KLL
Sbjct: 697 AYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 149/270 (55%), Gaps = 5/270 (1%)
Query: 144 LLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISW 203
LL L+K G+V+ AR++FD+MP++ +WN MI Y S +++ A +LF P +N ISW
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISW 93
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
N++ISGY +G +EA LF + +G+ P+ T+ S L + L +L G IH +K
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG-HWTAIIVGLGMHGLADQALE 322
FDLD + L+ MY++C I A +F+ + +K WT+++ G +G A +A+E
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 323 LFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDI 381
F ++RR G + + TF VL AC+ G + ++ +K V+ L+D+
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDM 271
Query: 382 LCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+ ++ A+ ++E M + + V W S++
Sbjct: 272 YAKCREMESARALLEGMEV-DDVVSWNSMI 300
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 182/415 (43%), Gaps = 72/415 (17%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G IH Y + K + L+ +K G + AR++FDKM +RD +WN++I Y+
Sbjct: 17 GSCIHSYADRT-----KLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVSW- 172
+ + A KLF P ++ +W AL+ G K G A +F +M P + ++
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 173 --------------------------------NAMINGYMKSGKINLARQLFGQMPG-RN 199
N ++ Y + +I+ A LF M G +N
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
++W SM++GY NG +A+E F L +EG + T S L+A + ++ G +H
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC 251
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
+VK F + + ++LI+MY+KC +ESA A+ + + + W ++IVG GL +
Sbjct: 252 CIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGE 311
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY---- 375
AL +F M MK T +LN CF + E KI +
Sbjct: 312 ALSMFGRMHERDMKIDDFTIPSILN-------------CFALSRTEMKIASSAHCLIVKT 358
Query: 376 ---------GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
LVD+ + G + A + E M + + + W +L++ + ++G+ +
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYD 412
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 13/237 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE- 59
M +VSWN +I V +AL +F +M D+ D FT+P ++ C L +
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMK 346
Query: 60 -GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
H ++K G+ K V ++LV+MYAK G M A KVF+ M+++DV+SW +L+ G
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 119 RNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQ-----MPKKSS 169
NG+ + A+KLF M + D ++L A+ +E ++V P S
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
V+ N+++ Y K G + A +F M R+LI+W +I GY NG +A F+ +
Sbjct: 467 VN-NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SW +++ HN ++AL LF M + PD V+ + L ++ G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+HG +K GF V +SLV MY K G + A +F+ M RD+++W LI GYA+N
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 121 GNVEVAMKLFDEMPSRDAFT-----WTALLDGLAKCGKVEAAREVFDQMP-KKSSVSWNA 174
G +E A + FD M + T + ++D + G ++ QM + + W A
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 175 MINGYMKSGKI---NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
++ K G I A + ++ N + + + + Y GR EA
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEA 617
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 299/519 (57%), Gaps = 7/519 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M+ +V+WN +I YV N +AL F M+ D ++ +I RL + G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
++H YV+K G+ + V ++L++MY+K + F +M D+D++SW ++I GYA+N
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK---SSVSWN 173
A++LF ++ + D ++L + + +E+ + +K +V N
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQN 525
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
+++ Y K + A ++F + G++++SW SMIS LNG EA+ELF +++ GL
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
V +L LSA + L+ L GR IH ++++ F L+G + ++++MY+ CG ++SA AVF
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
I K L +T++I GMHG A+ELF +MR + P I+F+ +L ACSH GL+D
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
EG +M +EY++ P EHY CLVD+L RA + +A ++ M P +W +LL++
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 414 SRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
R+H EIGE AA L+E +P G L+SN++A G+W+ V VR MK G+ K
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 474 GCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
GCS +E GK+++F DKSHP++K IY KL E+++KL+
Sbjct: 826 GCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 222/432 (51%), Gaps = 19/432 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFT-LPCVIKGCSRLHAVQE 59
M T +WN +I YV N AL L+ M + +P G + P ++K C++L ++
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYA 118
G ++H ++K+G+ F+ ++LV+MYAK ++ AR++FD ++ D V WNS++ Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 119 RNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
+G ++LF EM P+ +++T + L + +E+ + K S+ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 172 --WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
NA+I Y + GK+ A ++ QM ++++WNS+I GY N + EA+E F ++
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
G V++ S ++A L+ L G +H++++KH +D + +G +LI+MYSKC
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS-- 347
F + +K L WT +I G + +ALELF ++ + M+ + +L A S
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
L+ + C + V E LVD+ + ++ A + ES+ + + V W
Sbjct: 501 KSMLIVKEIHCHILRKGLLDTVIQNE----LVDVYGKCRNMGYATRVFESIKGK-DVVSW 555
Query: 408 MSLLSSSRNHGN 419
S++SSS +GN
Sbjct: 556 TSMISSSALNGN 567
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 240/503 (47%), Gaps = 45/503 (8%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
K V WN I+S Y + +S + L LFR+M P+ +T+ + C + GK
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 62 QIHGYVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+IH VLK + +V ++L+ MY + G+M A ++ +M + DVV+WNSLI GY +N
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 121 GNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
+ A++ F +M + D + T+++ + + A E+ + K S
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N +I+ Y K + F +M ++LISW ++I+GY N +EA+ELF + K+ +
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
+ + S L A S L + + IH +++ LD V+ L+++Y KC ++ A V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F++I K + WT++I ++G +A+ELF M G+ ++ + +L+A + +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 353 DEGNK--CF----DMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
++G + C+ + V V+ Y C G LQ AK + + + R +
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYAC-------CGDLQSAKAVFDRIE-RKGLLQ 655
Query: 407 WMSLLSSSRNHG----NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+ S++++ HG +E+ + H + D + L+ +YA SH
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDH-----ISFLALLYAC-------SHAGL 703
Query: 463 MMKERGVLKDAGCSIVEHRGKLN 485
+ + RG LK I+EH +L
Sbjct: 704 LDEGRGFLK-----IMEHEYELE 721
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 160/312 (51%), Gaps = 15/312 (4%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFD-KFVQSSLVNMYAKWGEMGLARKVFDKMVDR 105
V++ C + AV +G+Q+H + K F+ F+ LV MY K G + A KVFD+M DR
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 106 DVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVF 161
+WN++I Y NG A+ L+ M ++ ALL AK + + E+
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 162 DQMPK----KSSVSWNAMINGYMKSGKINLARQLF-GQMPGRNLISWNSMISGYQLNGRF 216
+ K + NA+++ Y K+ ++ AR+LF G + + WNS++S Y +G+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 217 LEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK---HCFDLDGVLG 273
LE +ELF + G P+ TI+SAL+A G + G+ IH+ ++K H +L +
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL--YVC 323
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
+LI MY++CG + A + + + N + W ++I G + + +ALE F +M G K
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 334 PHAITFIGVLNA 345
++ ++ A
Sbjct: 384 SDEVSMTSIIAA 395
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y K G ++ A ++F +MP R +WN+MI Y NG A+ L+ + EG+ +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
+ L A + L + +G +HS +VK + G + +L+ MY+K + +A +F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 299 KKLG-HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
K W +I+ G + + LELF EM G P++ T + L AC G +
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 358 CFDMMINEYKIVPTVEHYGC--LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
++ + E Y C L+ + R G + QA+ I+ M + V W SL+
Sbjct: 306 IHASVLKSS--THSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 250 VLGNGRWIHSFMVKH--CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
+ GR +HS + K F+LD + G L+ MY KCGS++ A VF + ++ W +
Sbjct: 95 AVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTM 153
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I +G AL L+ MR G+ +F +L AC+ + G++ +++ +
Sbjct: 154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV-KLG 212
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG-NLEIGE-Y 425
T LV + + L A+ + + + + V+W S+LSS G +LE E +
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 426 AAHNLIEADPDATGCYTLLSNIYAAAG 452
++ P++ YT++S + A G
Sbjct: 273 REMHMTGPAPNS---YTIVSALTACDG 296
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 297/517 (57%), Gaps = 12/517 (2%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V+WN II YV + ++A LF++M ++ DG L +K C+ +H + +GKQ+H
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+K G D SSL++MY+K G + ARKVF + + VVS N+LI GY++N N+E A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMIN 177
+ LF EM +R T+ +++ K + + Q+ K+ S +++
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 178 GYMKSGKINLARQLFGQMPG-RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
YM S + A LF ++ ++++ W M+SG+ NG + EA++ ++ + +G++P
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T ++ L S L+ L GR IHS + DLD + +LI+MY+KCG ++ + VF +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 297 ANKK-LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ + W ++I G +G A+ AL++F MR+ + P ITF+GVL ACSH G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
K F+MMI +Y I V+H C+VD+L R G+LQ+A + IE+ ++P+ +W SLL + R
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
HG+ GE +A LIE +P + Y LLSNIYA+ G W+K + +R++M++RGV K G
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
S ++ + + F GDKSH + I L ++ +K
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 205/412 (49%), Gaps = 37/412 (8%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ +WN ++S Y + L F + + + P+ FT V+ C+R V+ G+QIH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++K+G + + +LV+MYAK D++ D
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKC----------DRISD--------------------- 213
Query: 126 AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMK 181
A ++F+ + + WT L G K G E A VF++M + +++ +IN Y++
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 182 SGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSA 241
GK+ AR LFG+M ++++WN MISG+ G A+E F + K + + T+ S
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 242 LSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
LSA+ +A L G +H+ +K + +G+SL+ MYSKC +E+A VF+A+ K
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
W A+I G +G + + +ELFM+M+ G TF +L+ C+ ++ G++ F
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHS 452
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
+I + K+ + LVD+ + G L+ A+ I E M R N V W +++ S
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGS 503
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 210/430 (48%), Gaps = 11/430 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M P +V+WN++IS + A+ F M + TL V+ + + G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H +K+G + +V SSLV+MY+K +M A KVF+ + +++ V WN++I GYA N
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
G M+LF +M S D FT+T+LL A +E + + KK
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
NA+++ Y K G + ARQ+F +M R+ ++WN++I Y + EA +LF+ + G++
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
+ S L A + + L G+ +H VK D D G+SLI+MYSKCG I+ A V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F ++ + A+I G + L ++A+ LF EM G+ P ITF ++ AC +
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 353 DEGNKCFDMMINEYKIVPTVEHYG-CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
G + F I + E+ G L+ + + + +A + + + V+W ++
Sbjct: 646 TLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Query: 412 SSSRNHGNLE 421
S +G E
Sbjct: 705 SGHSQNGFYE 714
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
++V W ++S + N +AL +++M H +LPD T V++ CS L +++EG+ IH
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYARNGNV 123
+ + D+ ++L++MYAK G+M + +VFD+M R +VVSWNSLI+GYA+NG
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM 164
E A+K+FD M D T+ +L + GKV R++F+ M
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 133 MPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-------------------- 172
+PS D L L +C K+ +R+VFD+MP++ +++
Sbjct: 38 LPSHDQIHQRLLEICLGQC-KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGR 96
Query: 173 --NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
NA+++ Y K +++ A + F + +++ +WNSM+S Y G+ + + F L +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P+ T LS + + GR IH M+K + + G +L++MY+KC I A
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF+ I + WT + G GL ++A+ +F MR G +P + F+ V+N G
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 351 LVDEGNKCFDMM 362
+ + F M
Sbjct: 276 KLKDARLLFGEM 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+ +VSWN +I+ Y N + DAL +F M ++PD T V+ CS V +G++
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK 855
Query: 63 IHGYVLKIG-FGFDKFVQ--SSLVNMYAKWGEMGLARKVFD-KMVDRDVVSWNSLIDGYA 118
I + + IG +G + V + +V++ +WG + A + + + D W+SL+
Sbjct: 856 I--FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 119 RNGNV---EVAMKLFDEMPSRDAFTWTALLDGLAKCG---KVEAAREV 160
+G+ E++ + E+ +++ + L + A G K A R+V
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKV 961
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 288/505 (57%), Gaps = 34/505 (6%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
SW ++ + + + + ++ M + + P + V++ C ++ + +GK IH
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
LK G +VQ+ LV +Y++ G + LA+K FD + +++ VSWNSL+ GY +G ++ A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 128 KLFDEMPSRDAFTWTALLDGLAK-------------------------------CGKVEA 156
++FD++P +DA +W ++ AK C +++
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 157 AREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRF 216
AR FD MP+K+ VSW MI+GY K G + A +LF M ++ + +++MI+ Y NG+
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 217 LEAMELFEVLLKEG--LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
+A++LF +L+ + P +T+ S +SA S L G W+ S++ +H +D +L T
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
SLI++Y K G A +F + K ++A+I+G G++G+A +A LF M + P
Sbjct: 371 SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP 430
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+ +TF G+L+A SH GLV EG KCF+ M ++ + P+ +HYG +VD+L RAG L++A +
Sbjct: 431 NVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKW 454
I+SMPM+PN +W +LL +S H N+E GE A + ++ + D TG + L+ IY++ G+W
Sbjct: 490 IKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRW 549
Query: 455 DKVSHVREMMKERGVLKDAGCSIVE 479
D VR+ +KE+ + K GCS VE
Sbjct: 550 DDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD--LLPDGFTLPCVIKGCSRLHAVQ 58
M K + ++ +I+CY N + DAL LF QML + + PD TL V+ S+L
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G + Y+ + G D + +SL+++Y K G+ A K+F + +D VS++++I G
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSV 170
NG A LF M + + T+T LL + G V+ + F+ M + S+
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMI--SGYQLNGRFLE 218
+ M++ ++G++ A +L MP + N W +++ SG N F E
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGE 519
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 81/350 (23%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VSWNLIIS Y +A LF M P + +
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLFSAMPLKS--PASWNI---------------------- 237
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
L+ Y EM LAR FD M ++ VSW ++I GY + G+V+ A
Sbjct: 238 ---------------LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSA 282
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV---------------- 170
+LF M +D + A++ + GK + A ++F QM +++S
Sbjct: 283 EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 171 --------SW-----------------NAMINGYMKSGKINLARQLFGQMPGRNLISWNS 205
+W ++I+ YMK G A ++F + ++ +S+++
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 402
Query: 206 MISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC 265
MI G +NG EA LF ++++ + P+ VT LSA S ++ G + M H
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHN 462
Query: 266 FDLDGVLGTSLIEMYSKCGSIESALAVFKAIA-NKKLGHWTAIIVGLGMH 314
+ +++M + G +E A + K++ G W A+++ G+H
Sbjct: 463 LEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLH 512
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 319/574 (55%), Gaps = 15/574 (2%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAK--WGEMGLARKVFDKM-V 103
+++GC+ ++++ ++IH +V+ G + + L+ A G + A+ +FD
Sbjct: 11 MLQGCN---SMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 104 DRDVVSWNSLIDGYARNGNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAR 158
D WN LI G++ + + ++ ++ M D FT+ L + +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 159 EVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
E+ + + ++ +++ Y +G + +A ++F +MP R+L+SWN MI + G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
+A+ +++ + EG+ T+++ LS+ + ++ L G +H + +
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+LI+MY+KCGS+E+A+ VF + + + W ++I+G G+HG +A+ F +M G++P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+AITF+G+L CSH+GLV EG + F++M +++ + P V+HYGC+VD+ RAG L+ + +
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKW 454
I + + V+W +LL S + H NLE+GE A L++ + G Y L+++IY+AA
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 427
Query: 455 DKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLA 514
+ +R++++ + G S +E ++++F+V DK HP++ IY++L E+ + LA
Sbjct: 428 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 487
Query: 515 GHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAV 574
G+ P+ S +LAI++GL+ T +RI KNLRVC DCH+
Sbjct: 488 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 547
Query: 575 TKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
TK +S + REIIVRD RFHHF +G CSCND+W
Sbjct: 548 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 152/303 (50%), Gaps = 12/303 (3%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQEGKQ 62
P+ WN +I + ++ +++L + +ML + PD FT +K C R+ ++ + +
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
IHG V++ GF D V +SLV Y+ G + +A KVFD+M RD+VSWN +I ++ G
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 123 VEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAA----REVFDQMPKKSSVSWNA 174
A+ ++ M + D++T ALL A + R D + NA
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+I+ Y K G + A +F M R++++WNSMI GY ++G +EA+ F ++ G+ P+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAV 292
+T L L S ++ G M F L + ++++Y + G +E++L +
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQ-FHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 293 FKA 295
A
Sbjct: 368 IYA 370
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 123/234 (52%), Gaps = 14/234 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LVSWN++I C+ H N AL ++++M + + D +TL ++ C+ + A+ G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
I FV ++L++MYAK G + A VF+ M RDV++WNS+I GY +G+
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 126 AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMI 176
A+ F +M + +A T+ LL G + G V+ E F+ M + ++ N M+
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 177 NGYMKSGKI-NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ Y ++G++ N ++ + + W +++ +++ +EL EV +K+
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH----RNLELGEVAMKK 402
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 280/496 (56%), Gaps = 23/496 (4%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++ WN +I Y ++ + AL+ +++ML PD FT P V+K CS L +Q G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
HG+V+K GF + +V + L++MY GE+ +VF+ + +VV+W SLI G+ N
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 124 EVAMKLFDEMPSRDA-FTWTALLDGLAKCGKVEAAREV-----------FDQMPKKSSVS 171
A++ F EM S T ++D L CG+ + FD +S V
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY-FQSKVG 248
Query: 172 WN-----AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
+N ++I+ Y K G + AR LF MP R L+SWNS+I+GY NG EA+ +F +
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 227 LKEGLMPSHVTILSALSA--VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
L G+ P VT LS + A + G + LG IH+++ K F D + +L+ MY+K G
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQS--IHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVL 343
ESA F+ + K WT +I+GL HG ++AL +F M+ G P IT++GVL
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
ACSH GLV+EG + F M + + + PTVEHYGC+VDIL RAG ++A+ ++++MP++PN
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 486
Query: 404 KVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREM 463
IW +LL+ H NLE+ + + E + +G Y LLSNIYA AG+W V +RE
Sbjct: 487 VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRES 546
Query: 464 MKERGVLKDAGCSIVE 479
MK + V K G S VE
Sbjct: 547 MKSKRVDKVLGHSSVE 562
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 25/383 (6%)
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGE---MGLARKVFDKMVDRDVVSWNSLID 115
E Q+HG ++K + S L++ E + AR VF+ + V WNS+I
Sbjct: 21 ELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIR 80
Query: 116 GYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS--- 168
GY+ + N + A+ + EM S D FT+ +L + ++ V + K
Sbjct: 81 GYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV 140
Query: 169 --SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
VS +++ YM G++N ++F +P N+++W S+ISG+ N RF +A+E F +
Sbjct: 141 NMYVS-TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD--------LDGVLGTSLIE 278
G+ + ++ L A + G+W H F+ FD + +L TSLI+
Sbjct: 200 QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLID 259
Query: 279 MYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
MY+KCG + +A +F + + L W +II G +G A++AL +F++M +G+ P +T
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 339 FIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
F+ V+ A +G G + +++ V LV++ + G + AK E +
Sbjct: 320 FLSVIRASMIQGCSQLG-QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Query: 399 PMRPNKVIWMSLLS--SSRNHGN 419
+ + + W ++ +S HGN
Sbjct: 379 E-KKDTIAWTVVIIGLASHGHGN 400
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 34/299 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIK-----GCSRLH 55
M + TLVSWN II+ Y N + +AL +F ML + PD T VI+ GCS+L
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL- 335
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
G+ IH YV K GF D + +LVNMYAK G+ A+K F+ + +D ++W +I
Sbjct: 336 ----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVII 391
Query: 116 GYARNGNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMP----- 165
G A +G+ A+ +F M + D T+ +L + G VE + F +M
Sbjct: 392 GLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL 451
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFE 224
+ + + M++ ++G+ A +L MP + N+ W ++++G ++ E +EL +
Sbjct: 452 EPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH----ENLELTD 507
Query: 225 VLLKEGLMPSHV--TILSALSAVSGLAVLGNGRWIHSFMVKHCFD---LDGVLGTSLIE 278
+ P + I LS + A GRW +++ +D VLG S +E
Sbjct: 508 RIRSMVAEPEELGSGIYVLLSNIYAKA----GRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 19/313 (6%)
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
++ AR +F + ++ WNSMI GY + +A+ ++ +L++G P + T L A
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHW 304
SGL + G +H F+VK F+++ + T L+ MY CG + L VF+ I + W
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN 364
++I G + A+E F EM+ G+K + + +L AC + G K F +
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQ 235
Query: 365 EYKIVPTVEH--------YGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
P + L+D+ + G L+ A+ + + MP R V W S+++
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER-TLVSWNSIITGYSQ 294
Query: 417 HGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAA--AGKWDKVSHVREMMKERGVLKD 472
+G+ E ++++ PD T LS I A+ G + + + G +KD
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKV---TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD 351
Query: 473 AG--CSIVEHRGK 483
A C++V K
Sbjct: 352 AAIVCALVNMYAK 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 10/184 (5%)
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG---SIESALAVFK 294
ILS L L L +H M+K + + + LI+ + C ++ A +VF+
Sbjct: 9 ILSQLENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD- 353
+I + W ++I G D+AL + EM R G P TF VL ACS GL D
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS--GLRDI 123
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
+ C + + + CL+ + G + + E +P + N V W SL+S
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISG 182
Query: 414 SRNH 417
N+
Sbjct: 183 FVNN 186
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 301/527 (57%), Gaps = 9/527 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + V+WN +IS YV + ++L F +M+ +LPD T ++ S+ ++
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQIH Y+++ D F+ S+L++ Y K + +A+ +F + DVV + ++I GY N
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN--- 173
G ++++F + S + T ++L + ++ RE+ + KK +
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG 479
Query: 174 -AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
A+I+ Y K G++NLA ++F ++ R+++SWNSMI+ + A+++F + G+
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC 539
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
V+I +ALSA + L G+ IH FM+KH D ++LI+MY+KCG++++A+ V
Sbjct: 540 YDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSHKGL 351
FK + K + W +II G HG +L LF EM + G++P ITF+ ++++C H G
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
VDEG + F M +Y I P EHY C+VD+ RAG L +A ++SMP P+ +W +LL
Sbjct: 660 VDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+ R H N+E+ E A+ L++ DP +G Y L+SN +A A +W+ V+ VR +MKER V K
Sbjct: 720 GACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQK 779
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVP 518
G S +E + + F+ GD +HP++ IY+ L + +L+L G++P
Sbjct: 780 IPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 216/429 (50%), Gaps = 14/429 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ + ++ WN IIS +V N N AL + +ML + PD T PC++K C L +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ V +G ++FV SSL+ Y ++G++ + K+FD+++ +D V WN +++GYA+
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAARE-----VFDQMPKKSSVS 171
G ++ +K F M S +A T+ +L A ++ + V + + S+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N++++ Y K G+ + A +LF M + ++WN MISGY +G E++ F ++ G+
Sbjct: 278 -NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+P +T S L +VS L + IH ++++H LD L ++LI+ Y KC + A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
+F + + +TA+I G +GL +LE+F + ++ + P+ IT + +L
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGC-LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+ G + +I K + GC ++D+ + G + A I E + R + V W S+
Sbjct: 457 LKLGRELHGFIIK--KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSM 513
Query: 411 LSSSRNHGN 419
++ N
Sbjct: 514 ITRCAQSDN 522
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
Query: 44 LPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV 103
L +++ CS + +++GKQ+H +++ D + ++ MYA G K+F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 104 DR--DVVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAA 157
R + WNS+I + RNG + A+ + +M S D T+ L+ +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 158 REVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
+ D + + +++I Y++ GKI++ +LF ++ ++ + WN M++GY
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
G ++ F V+ + + P+ VT LS + ++ G +H +V D +G +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
SL+ MYSKCG + A +F+ ++ W +I G GL +++L F EM G+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 334 PHAITFIGVLNACS 347
P AITF +L + S
Sbjct: 338 PDAITFSSLLPSVS 351
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/431 (38%), Positives = 253/431 (58%), Gaps = 2/431 (0%)
Query: 79 QSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDA 138
Q L M G + A KVF +MV+++VV W S+I+GY N ++ A + FD P RD
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI 90
Query: 139 FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR 198
W ++ G + G + AR +FDQMP + +SWN ++ GY G + ++F MP R
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWI 257
N+ SWN +I GY NGR E + F+ ++ EG ++P+ T+ LSA + L G+W+
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 258 HSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
H + ++ +D + +LI+MY KCG+IE A+ VFK I + L W +I GL HG
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+AL LF EM+ G+ P +TF+GVL AC H GLV++G F+ M ++ I+P +EH G
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
C+VD+L RAG L QA I MP++ + VIW +LL +S+ + ++IGE A LI+ +P
Sbjct: 331 CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
+ +LSNIY AG++D + ++ M++ G K+AG S +E L +F + HP+
Sbjct: 391 NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPR 450
Query: 497 TKAIYAKLREM 507
T+ + LRE+
Sbjct: 451 TEELQRILREL 461
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 41/221 (18%)
Query: 75 DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP 134
D + +++++ Y + G M AR +FD+M RDV+SWN++++GYA G++E ++FD+MP
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 135 SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV-----------------------S 171
R+ F+W L+ G A+ G+V F +M + SV
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 172 W------------------NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
W NA+I+ Y K G I +A ++F + R+LISWN+MI+G +
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
G EA+ LF + G+ P VT + L A + ++ +G
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
M + + SWN +I Y N R ++ L F++M+ ++P+ T+ V+ C++L A
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 60 GKQIHGYVLKIGFG-FDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
GK +H Y +G+ D V+++L++MY K G + +A +VF + RD++SWN++I+G A
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 119 RNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV---- 170
+G+ A+ LF EM S D T+ +L G VE F+ M S+
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 171 -SWNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRF-LEAMELFEVLL 227
+++ ++G + A + +MP + + + W +++ ++ + + + L E++
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIK 386
Query: 228 KEGLMPSHVTILSALSAVSG 247
E P++ +LS + +G
Sbjct: 387 LEPRNPANFVMLSNIYGDAG 406
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 272/475 (57%), Gaps = 2/475 (0%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGKQ 62
P WN +I Y + + + + +M+ L PD +T P V+K CS V+ G
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+HG VL+IGF D V +S V+ Y K ++ ARKVF +M +R+ VSW +L+ Y ++G
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKS 182
+E A +FD MP R+ +W AL+DGL K G + A+++FD+MPK+ +S+ +MI+GY K
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 183 GKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
G + AR LF + G ++ +W+++I GY NG+ EA ++F + + + P ++ +
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDG-VLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
SA S + + S++ + + +LI+M +KCG ++ A +F+ + + L
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL 371
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
+ +++ G+ +HG +A+ LF +M G+ P + F +L C LV+EG + F++
Sbjct: 372 VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFEL 431
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
M +Y I+ + +HY C+V++L R G L++A +I+SMP + W SLL HGN E
Sbjct: 432 MRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTE 491
Query: 422 IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
I E A +L E +P + G Y LLSNIYAA +W V+H+R+ M E G+ K G S
Sbjct: 492 IAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 188/440 (42%), Gaps = 109/440 (24%)
Query: 31 QMLHHDLLPDGFTLPCVIKGC-SRLHAVQEGKQIHGYVLKIGFGFDK-FVQSSLVNMYAK 88
Q L H P +L + K C S +H QIH +++ G D+ + + + +
Sbjct: 3 QRLSH---PSLLSLETLFKLCKSEIHL----NQIHARIIRKGLEQDQNLISIFISSSSSS 55
Query: 89 WGEMGLARKVFDKMVDRDVVSWNSLIDGY------------------------------- 117
+ + VF+++ WN LI GY
Sbjct: 56 SSSLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPL 115
Query: 118 -----ARNGNVEVAMKL--------FDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM 164
+ NG V V + FD +D T+ +D KC + +AR+VF +M
Sbjct: 116 VMKVCSNNGQVRVGSSVHGLVLRIGFD----KDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 165 PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFE 224
P++++VSW A++ Y+KSG++ A+ +F MP RNL SWN+++ G +G + A +LF+
Sbjct: 172 PERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFD 231
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
+ K D + TS+I+ Y+K G
Sbjct: 232 EMPKR---------------------------------------DIISYTSMIDGYAKGG 252
Query: 285 SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
+ SA +F+ + W+A+I+G +G ++A ++F EM +KP +G+++
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS 312
Query: 345 ACSHKG---LVDEGNKCFDMMINEYK---IVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
ACS G L ++ + +N++ +VP L+D+ + GH+ +A + E M
Sbjct: 313 ACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPA------LIDMNAKCGHMDRAAKLFEEM 366
Query: 399 PMRPNKVIWMSLLSSSRNHG 418
P R + V + S++ HG
Sbjct: 367 PQR-DLVSYCSMMEGMAIHG 385
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 29/331 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-----LPDGFTLPCVIKGCSRLH 55
M + VSW ++ YV + +A +F M +L L DG + +L
Sbjct: 171 MPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLF 230
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
+ I Y +S+++ YAK G+M AR +F++ DV +W++LI
Sbjct: 231 DEMPKRDIISY-------------TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALIL 277
Query: 116 GYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREV----FDQMPKK 167
GYA+NG A K+F EM ++ D F L+ ++ G E +V +M K
Sbjct: 278 GYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF 337
Query: 168 SS-VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
SS A+I+ K G ++ A +LF +MP R+L+S+ SM+ G ++G EA+ LFE +
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ EG++P V L ++ G R+ K+ + ++ + S+ G
Sbjct: 398 VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGK 457
Query: 286 IESALAVFKAIA-NKKLGHWTAIIVGLGMHG 315
++ A + K++ W +++ G +HG
Sbjct: 458 LKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 286/519 (55%), Gaps = 13/519 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + + SWN +ISC+ + + AL LF +M P+ +L I CSRL ++ G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IH +K GF D++V S+LV+MY K + +AR+VF KM + +V+WNS+I GY
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 121 GNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK---SSVS 171
G+ + +++ + M PS+ T T++L ++ + + + + + + +
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQT--TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 172 WN-AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N ++I+ Y K G+ NLA +F + SWN MIS Y G + +A+E+++ ++ G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P VT S L A S LA L G+ IH + + + D +L ++L++MYSKCG+ + A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F +I K + WT +I G HG +AL F EM++ G+KP +T + VL+AC H G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP-MRPNKVIWMS 409
L+DEG K F M ++Y I P +EHY C++DIL RAG L +A II+ P N + +
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 410 LLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
L S+ H +G+ A L+E PD Y +L N+YA+ WD VR MKE G+
Sbjct: 586 LFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Query: 470 LKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMS 508
K GCS +E K+ F D+SH + + +Y L +S
Sbjct: 646 RKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 212/451 (47%), Gaps = 73/451 (16%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
WN ++S Y N +D L +F+++L+ + +PD FT P VIK L G+ IH V
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K G+ D V SSLV MYAK+ + +VFD+M +RDV SWN++I + ++G E A+
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 128 KLFDEMPSR---------------------------------------DAFTWTALLDGL 148
+LF M S D + +AL+D
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 149 AKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMIS 208
KC +E AREVF +MP+KS V+WN+MI GY+ G
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK---------------------- 291
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL 268
+E+ ++ EG PS T+ S L A S L +G++IH ++++ +
Sbjct: 292 ---------SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D + SLI++Y KCG A VF W +I G +A+E++ +M
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHL 388
+G+KP +TF VL ACS +++G + + I+E ++ L+D+ + G+
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 389 QQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
++A I S+P + + V W ++S+ +HG
Sbjct: 462 KEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 20/373 (5%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYAR 119
K +H +L +G D + SL+N+Y + AR VF+ + DV WNSL+ GY++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 120 NGNVEVAMKLFDEMPS-----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
N +++F + + D+FT+ ++ G+ R + + K V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
++++ Y K + Q+F +MP R++ SWN++IS + +G +A+ELF + G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P+ V++ A+SA S L L G+ IH VK F+LD + ++L++MY KC +E A
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF+ + K L W ++I G G + +E+ M G +P T +L ACS
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 351 LVDEGNKCFDMMINEYKIVPTVE---HYGC-LVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ G I+ Y I V + C L+D+ + G A+ + S +
Sbjct: 324 NLLHGK-----FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF-SKTQKDVAES 377
Query: 407 WMSLLSSSRNHGN 419
W ++SS + GN
Sbjct: 378 WNVMISSYISVGN 390
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 280/543 (51%), Gaps = 49/543 (9%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLL------PDGFTLPCVIK---GCSRLHAVQ 58
S+N ++ Y DA LF + PD ++ CV+K GC
Sbjct: 90 SYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGS 149
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
+Q+HG+V++ GF D FV + ++ Y K + ARKVFD+M +RDVVSWNS+I GY+
Sbjct: 150 LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 119 RNGNVEVAMKLFDEMPSRDAFT-------------------------------------- 140
++G+ E K++ M + F
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 141 --WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR 198
A++ AKCG ++ AR +FD+M +K SV++ A+I+GYM G + A LF +M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
L +WN+MISG N E + F +++ G P+ VT+ S L +++ + L G+ IH
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
+F +++ D + + TS+I+ Y+K G + A VF ++ L WTAII +HG +D
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
A LF +M+ +G KP +T VL+A +H G D FD M+ +Y I P VEHY C+
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 379 VDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDAT 438
V +L RAG L A I MP+ P +W +LL+ + G+LEI +A L E +P+ T
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 439 GCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTK 498
G YT+++N+Y AG+W++ VR MK G+ K G S +E L FI D S ++K
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSK 629
Query: 499 AIY 501
+Y
Sbjct: 630 EMY 632
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 190/439 (43%), Gaps = 77/439 (17%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLH-HDLLPDGFTLPCVIKGCSRLHAVQE 59
M + +VSWN +IS Y + D +++ ML D P+G T+ V + C + +
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G ++H +++ D + ++++ YAK G + AR +FD+M ++D V++ ++I GY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVS-- 171
+G V+ AM LF EM S TW A++ GL + E F +M P ++S
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
Query: 172 -------------------------------WNAMINGYMKSGKINLARQLFGQMPGRNL 200
++I+ Y K G + A+++F R+L
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL 432
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
I+W ++I+ Y ++G A LF+ + G P VT+ + LSA A G+ S
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA---FAHSGD-----SD 484
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
M +H FD S++ Y +E H+ ++ L G A
Sbjct: 485 MAQHIFD-------SMLTKYDIEPGVE---------------HYACMVSVLSRAGKLSDA 522
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP-TVEHYGCLV 379
+E +M + P A + +LN S G ++ D + +++ P +Y +
Sbjct: 523 MEFISKMP---IDPIAKVWGALLNGASVLGDLEIARFACDRL---FEMEPENTGNYTIMA 576
Query: 380 DILCRAGHLQQAKNIIESM 398
++ +AG ++A+ + M
Sbjct: 577 NLYTQAGRWEEAEMVRNKM 595
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 145/295 (49%), Gaps = 27/295 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M L +WN +IS + N+ + + FR+M+ P+ TL ++ + ++ G
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IH + ++ G + +V +S+++ YAK G + A++VFD DR +++W ++I YA +
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
G+ + A LFD+M D T TA+L A G + A+ +FD M K +
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEH 505
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLIS-WNSMISGYQLNGRFLEAM----ELFEVL 226
+ M++ ++GK++ A + +MP + W ++++G + G A LFE+
Sbjct: 506 YACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM- 564
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD---LDGVLGTSLIE 278
E + TI++ L + GRW + MV++ L + GTS IE
Sbjct: 565 --EPENTGNYTIMANLYTQA-------GRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 136/340 (40%), Gaps = 78/340 (22%)
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
Q+H ++ D F+ S L++ Y + A VFD++ R+ S+N+L+ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 122 NVEVAMKLF----------------DEMP------------------------------- 134
A LF D +
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 135 -SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFG 193
D F ++ KC +E+AR+VFD+M ++ VSWN+MI+GY +SG ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 194 QMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
M L P+ VT++S A + L
Sbjct: 223 AM------------------------------LACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
G +H M+++ +D L ++I Y+KCGS++ A A+F ++ K + AII G
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
HGL +A+ LF EM IG+ G++ H+ +++
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 12/254 (4%)
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF------EVLLK 228
+I+ Y + + A +F ++ RN S+N+++ Y + +A LF
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 229 EGLMPSHVTILSALSAVSGLAV--LGN-GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ P ++I L A+SG LG+ R +H F+++ FD D +G +I Y+KC +
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLN 344
IESA VF ++ + + W ++I G G + +++ M KP+ +T I V
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQ 242
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
AC + G + MI E I + ++ + G L A+ + + M + +
Sbjct: 243 ACGQSSDLIFGLEVHKKMI-ENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DS 300
Query: 405 VIWMSLLSSSRNHG 418
V + +++S HG
Sbjct: 301 VTYGAIISGYMAHG 314
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 291/523 (55%), Gaps = 12/523 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M ++SW ++S Y N +A+ LF M L PD + ++ C+ LHA+ G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H Y +K G D +V +SL++MYAK + ARKVFD DVV +N++I+GY+R
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 121 GN---VEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
G + A+ +F +M R T+ +LL A + ++++ M K
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ +A+I+ Y + +R +F +M ++L+ WNSM +GY EA+ LF L
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
P T + ++A LA + G+ H ++K + + + +L++MY+KCGS E A
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
F + A++ + W ++I HG +AL++ +M G++P+ ITF+GVL+ACSH
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
GLV++G K F++M+ + I P EHY C+V +L RAG L +A+ +IE MP +P ++W S
Sbjct: 670 GLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 410 LLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
LLS GN+E+ E+AA I +DP +G +T+LSNIYA+ G W + VRE MK GV
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
Query: 470 LKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
+K+ G S + +++ F+ DKSH + IY L ++ +++
Sbjct: 789 VKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 217/430 (50%), Gaps = 15/430 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ + + V+W +IS V RS +L LF Q++ +++PDG+ L V+ CS L ++ G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQIH ++L+ G D + + L++ Y K G + A K+F+ M +++++SW +L+ GY +N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSW 172
+ AM+LF M D + +++L A + +V K + S
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG---RFLEAMELFEVLLKE 229
N++I+ Y K + AR++F +++ +N+MI GY G EA+ +F +
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+ PS +T +S L A + L LG + IH M K+ +LD G++LI++YS C ++ +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
VF + K L W ++ G ++AL LF+E++ +P TF ++ A +
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 350 GLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
V G + ++ + P + + L+D+ + G + A +S R + V W
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASR-DVVCWN 625
Query: 409 SLLSSSRNHG 418
S++SS NHG
Sbjct: 626 SVISSYANHG 635
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 215/428 (50%), Gaps = 20/428 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLH-HDLLPDGFTLPCVIKGCSRLHAVQE 59
M + LVSW+ ++S H+ ++L++F + P+ + L I+ CS L
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--R 162
Query: 60 GK----QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
G+ Q+ +++K GF D +V + L++ Y K G + AR VFD + ++ V+W ++I
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 116 GYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK---- 167
G + G V+++LF ++ D + + +L + +E +++ + +
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ N +I+ Y+K G++ A +LF MP +N+ISW +++SGY+ N EAMELF +
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K GL P S L++ + L LG G +H++ +K D + SLI+MY+KC +
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 288 SALAVFKAIANKKLGHWTAIIVG---LGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
A VF A + + A+I G LG +AL +F +MR ++P +TF+ +L
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
A + + + +M +Y + + L+D+ L+ ++ + + M ++ +
Sbjct: 463 ASASLTSLGLSKQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DL 520
Query: 405 VIWMSLLS 412
VIW S+ +
Sbjct: 521 VIWNSMFA 528
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 49/406 (12%)
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+HG ++ G D ++ + L+N+Y++ G M ARKVF+KM +R++VSW++++ +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 123 VEVAMKLFDEM--PSRDAFTWTALLDGLAKCGKVEA-AREVFDQMPK---KSSVSWNA-- 174
E ++ +F E +D+ L + C ++ R + Q+ KS +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 175 ---MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+I+ Y+K G I+ AR +F +P ++ ++W +MISG GR +++LF L+++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+P + + LSA S L L G+ IH+ ++++ ++D L LI+ Y KCG + +A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH--- 348
+F + NK + WT ++ G + L +A+ELF M + G+KP +L +C+
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 349 -----------------------KGLVDEGNKCFDMMINEYKI-----VPTVEHYGCLVD 380
L+D KC D + + K+ V + +++
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC-DCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 381 ILCRAG---HLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNL 420
R G L +A NI M +RP+ + ++SLL +S + +L
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 284/495 (57%), Gaps = 42/495 (8%)
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMY-AKWGEMGLARKVFDKMVDRDVVSW 110
++ ++E KQIH ++K G D S ++ A +M A VF ++ ++ W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 111 NSLIDGYARNGNVEVAMKLFDEM--------PSR-------------------------- 136
N++I G++R+ E+A+ +F +M P R
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 137 -------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLAR 189
D+F +L CG + A +F M V+WN+MI G+ K G I+ A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
LF +MP RN +SWNSMISG+ NGRF +A+++F + ++ + P T++S L+A + L
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
GRWIH ++V++ F+L+ ++ T+LI+MY KCG IE L VF+ K+L W ++I+
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
GL +G ++A++LF E+ R G++P +++FIGVL AC+H G V ++ F +M +Y I
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHN 429
P+++HY +V++L AG L++A+ +I++MP+ + VIW SLLS+ R GN+E+ + AA
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 430 LIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIV 489
L + DPD T Y LLSN YA+ G +++ R +MKER + K+ GCS +E +++ FI
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFIS 512
Query: 490 GDKSHPQTKAIYAKL 504
+HP++ IY+ L
Sbjct: 513 CGGTHPKSAEIYSLL 527
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 291/550 (52%), Gaps = 44/550 (8%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
+ WN++I+ Y N + + +++M+ + PD FT P V+K C V G+ +HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ + +V ++L++MY ++ MG+AR++FD+M +RD VSWN++I+ YA G A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 127 MKLFDEM----PSRDAFTW--------------------------------TALLDGLAK 150
+LFD+M TW A++ GL
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 151 CGKVEAAR--EVFDQMPKKSSVSW-----NAMINGYMKSGKINLARQLFGQMPGRNLISW 203
C + A R + + SS N +I Y K + A +F Q +L +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
NS+ISGY + EA L +L G P+ +T+ S L + +A L +G+ H ++++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 264 H-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
CF +L SL+++Y+K G I +A V ++ + +T++I G G G AL
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 323 LFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDIL 382
LF EM R G+KP +T + VL+ACSH LV EG + F M EY I P ++H+ C+VD+
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 383 CRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYT 442
RAG L +AK+II +MP +P+ W +LL++ HGN +IG++AA L+E P+ G Y
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 443 LLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYA 502
L++N+YAAAG W K++ VR +M++ GV KD GC+ ++ + F VGD S P+ Y
Sbjct: 590 LIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYP 649
Query: 503 KLREMSKKLK 512
L +++ +K
Sbjct: 650 LLDGLNQLMK 659
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 50/418 (11%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD 106
++ C + A G Q+H + + G + + LV Y+ + A+ + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFD 162
+ WN LI YA+N E + + M S+ DAFT+ ++L + V R V
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 163 QMP----KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLE 218
+ K S NA+I+ Y + + +AR+LF +M R+ +SWN++I+ Y G + E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 219 AMELFEVLLKEGLMPSHVT-----------------------------------ILSALS 243
A ELF+ + G+ S +T ++ L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
A S + + G+ IH + +D +D V T LI MYSKC + AL VF+ L
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 303 HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK--CFD 360
W +II G +++A L EM G +P++IT +L C+ + G + C+
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ +K + + LVD+ ++G + AK + + M R ++V + SL+ N G
Sbjct: 408 LRRKCFKDYTML--WNSLVDVYAKSGKIVAAKQVSDLMSKR-DEVTYTSLIDGYGNQG 462
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 168/340 (49%), Gaps = 18/340 (5%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
++++WN+I + AL L +M + D + +K CS + A++ GK+IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G + + V+++L+ MY+K ++ A VF + + + +WNS+I GYA+ E
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 125 VAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SVSWNAM 175
A L EM ++ T ++L A+ ++ +E + ++ ++ WN++
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
++ Y KSGKI A+Q+ M R+ +++ S+I GY G A+ LF+ + + G+ P H
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHC-FDLDGVLG--TSLIEMYSKCGSIESALAV 292
VT+++ LSA S ++ G + FM C + + L + ++++Y + G + A +
Sbjct: 484 VTVVAVLSACSHSKLVHEGERL--FMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 293 FKAIANKKLG-HWTAIIVGLGMHG---LADQALELFMEMR 328
+ K G W ++ +HG + A E +EM+
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK 581
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 314/606 (51%), Gaps = 23/606 (3%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
W ++S +V N R+ +A+ F +M L P+ FT ++ CS + ++ GKQIH +
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGL-ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K+GF V ++LV+MY K + A +VF MV +VVSW +LI G +G V+
Sbjct: 353 KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 128 KLFDEMPSRDAFTWTALLDG-LAKCGKVEAAREVFD-------QMPKKSSVSWNAMINGY 179
L EM R+ L G L C K+ R V + + V N++++ Y
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
S K++ A + M R+ I++ S+++ + G+ A+ + + +G+ +++
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP 532
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK 299
+SA + L L G+ +H + VK F + SL++MYSKCGS+E A VF+ IA
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 300 KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF 359
+ W ++ GL +G AL F EMR +P ++TF+ +L+ACS+ L D G + F
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 360 DMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
+M Y I P VEHY LV IL RAG L++A ++E+M ++PN +I+ +LL + R GN
Sbjct: 653 QVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN 712
Query: 420 LEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVE 479
L +GE A+ + P Y LL+++Y +GK + R +M E+ + K G S VE
Sbjct: 713 LSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Query: 480 HRGKLNRFIVGDKSH-PQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXX 538
+GK++ F+ D + +T IYA++ + +++K G ++
Sbjct: 773 VQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNE-------------NAS 819
Query: 539 XXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFK 598
+ A+ +G + P+ ++KN +C DCH +L+ + ++I VRD ++ H FK
Sbjct: 820 FHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFK 879
Query: 599 NGTCSC 604
NG CSC
Sbjct: 880 NGECSC 885
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 209/436 (47%), Gaps = 20/436 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M T+ +W ++IS + + AL LF +M+ P+ FT V++ C+ L + G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
++HG V+K GF + V SSL ++Y+K G+ A ++F + + D +SW +I
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGA 203
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLA----KCGKVEAAREVFDQMPKKSSVSW 172
A++ + EM + FT+ LL + + GK + + +P + V
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP-LNVVLK 262
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++++ Y + K+ A ++ +++ W S++SG+ N R EA+ F + GL
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE-SALA 291
P++ T + LS S + L G+ IHS +K F+ +G +L++MY KC + E A
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF A+ + + WT +I+GL HG L MEM + ++P+ +T GVL ACS
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 352 VDEGNKCFDMMINEYKIVPTVEHY----GCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
V + I+ Y + V+ LVD + + A N+I SM R N + +
Sbjct: 443 VRR-----VLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN-ITY 496
Query: 408 MSLLSSSRNHGNLEIG 423
SL++ G E+
Sbjct: 497 TSLVTRFNELGKHEMA 512
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 193/386 (50%), Gaps = 20/386 (5%)
Query: 49 KGCSRLHAVQE------GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
K C R+ + E G IH V+K G + + ++L+++Y K + ARK+FD+M
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR 158
R V +W +I + ++ A+ LF+EM + + FT+++++ A +
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 159 EVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
V + K +SV +++ + Y K G+ A +LF + + ISW MIS
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
++ EA++ + ++K G+ P+ T + L A S L L G+ IHS ++ L+ VL T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
SL++ YS+ +E A+ V + + + WT+++ G + A +A+ F+EMR +G++P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDIL--CRAGHLQQAK 392
+ T+ +L+ CS +D G + I + + + LVD+ C A + +A
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTI-KVGFEDSTDVGNALVDMYMKCSASEV-EAS 381
Query: 393 NIIESMPMRPNKVIWMSLLSSSRNHG 418
+ +M + PN V W +L+ +HG
Sbjct: 382 RVFGAM-VSPNVVSWTTLILGLVDHG 406
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 45/401 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M P +VSW +I V + D L +M+ ++ P+ TL V++ CS+L V+
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+IH Y+L+ + V +SLV+ YA ++ A V M RD +++ SL+ +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSW 172
G E+A+ + + M D + + A G +E + + K ++
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N++++ Y K G + A+++F ++ +++SWN ++SG NG A+ FE + +
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P VT L LSA S NGR LG ++ K +IE
Sbjct: 627 PDSVTFLILLSACS------NGRLTD-------------LGLEYFQVMKKIYNIE----- 662
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
++ H+ ++ LG G ++A + M +KP+A+ F +L AC ++G +
Sbjct: 663 ------PQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIFKTLLRACRYRGNL 713
Query: 353 DEGNKCFDMMINEYKIVPTVEH-YGCLVDILCRAGHLQQAK 392
G DM + P+ Y L D+ +G + A+
Sbjct: 714 SLGE---DMANKGLALAPSDPALYILLADLYDESGKPELAQ 751
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 278/477 (58%), Gaps = 34/477 (7%)
Query: 80 SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAF 139
+++++ YA+ G + A ++FD+M +R++VSWNS++ + G ++ AM LF+ MP RD
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLF------- 192
+WTA++DGLAK GKV+ AR +FD MP+++ +SWNAMI GY ++ +I+ A QLF
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 193 ------------------------GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+MP +N+ISW +MI+GY N EA+ +F +L+
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 229 EG-LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+G + P+ T +S LSA S LA L G+ IH + K + ++ ++L+ MYSK G +
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 288 SALAVFKA--IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+A +F + + L W ++I HG +A+E++ +MR+ G KP A+T++ +L A
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
CSH GLV++G + F ++ + + EHY CLVD+ RAG L+ N I R ++
Sbjct: 444 CSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRS 503
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
+ ++LS+ H + I + ++E D G Y L+SNIYAA GK ++ + +R MK
Sbjct: 504 FYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMK 563
Query: 466 ERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQ 522
E+G+ K GCS V+ + + F+VGDKSHPQ +A+ + L ++ K++ +V ++
Sbjct: 564 EKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAE 620
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 39/462 (8%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR-DAFT 140
L+ K G++ ARK+FD + +RDVV+W +I GY + G++ A +LFD + SR + T
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
WTA++ G + ++ A +F +MP+++ VSWN MI+GY +SG+I+ A +LF +MP RN+
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
+SWNSM+ GR EAM LFE MP ++S + V GLA NG+ +
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFE------RMPRR-DVVSWTAMVDGLA--KNGKVDEAR 222
Query: 261 MVKHCFDLDGVLG-TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
+ C ++ ++I Y++ I+ A +F+ + + W +I G + ++
Sbjct: 223 RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
A LF M + + I++ ++ +E F M+ + + P V G V
Sbjct: 283 ACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV---GTYV 335
Query: 380 DILCRAGHL------QQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
IL L QQ +I + N+++ +LL+ G L N +
Sbjct: 336 SILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVC 395
Query: 434 DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA--------GCS---IVEHRG 482
D ++++ +YA G + + M++ G A CS +VE
Sbjct: 396 QRDLISWNSMIA-VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 483 KLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVL 524
+ + +V D+S P + Y L ++ + AG + D + +
Sbjct: 455 EFFKDLVRDESLPLREEHYTCLVDLCGR---AGRLKDVTNFI 493
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 166/370 (44%), Gaps = 57/370 (15%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SWN +I+ Y N+R ++A LF+ M D
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS--------------------- 266
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
++++ + + EM A +FD+M +++V+SW ++I GY N
Sbjct: 267 ------------------WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVEN 308
Query: 121 GNVEVAMKLFDEMPSRDAF------TWTALLDGLAKCGKVEAAREVFDQMPK----KSSV 170
E A+ +F +M RD T+ ++L + + +++ + K K+ +
Sbjct: 309 KENEEALNVFSKML-RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI 367
Query: 171 SWNAMINGYMKSGKINLARQLF--GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+A++N Y KSG++ AR++F G + R+LISWNSMI+ Y +G EA+E++ + K
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK-HCFDLDGVLGTSLIEMYSKCGSIE 287
G PS VT L+ L A S ++ G +V+ L T L+++ + G ++
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Query: 288 SALAVFKAIANKKLGH--WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+ F + +L + AI+ +H A E+ ++ G A T++ + N
Sbjct: 488 D-VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNI 545
Query: 346 CSHKGLVDEG 355
+ G +E
Sbjct: 546 YAANGKREEA 555
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 309/614 (50%), Gaps = 47/614 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ +W +IS +HN AL +FR+M ++P+ T+ + CS L + +G ++H
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+K+GF +D DV+ NSL+D Y++ G +E
Sbjct: 377 IAVKMGF------------------------------ID-DVLVGNSLVDMYSKCGKLED 405
Query: 126 AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMK 181
A K+FD + ++D +TW +++ G + G A E+F +M + + ++WN MI+GY+K
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 182 SGKINLARQLFGQMPG-----RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+G A LF +M RN +WN +I+GY NG+ EA+ELF + MP+ V
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
TILS L A + L R IH +++ D + +L + Y+K G IE + +F +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
K + W ++I G +HG AL LF +M+ G+ P+ T ++ A G VDEG
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
K F + N+Y I+P +EH +V + RA L++A I+ M ++ IW S L+ R
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
HG++++ +AA NL +P+ T +++S IYA K + + ++ + K G S
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQS 765
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXX 536
+E R ++ F GD+S T +Y + +MS+ + +
Sbjct: 766 WIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWI-----EEEGREET 820
Query: 537 XXXXXXRLAISFGLLNME--RRTPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRF 594
+ A++FGL++ +T IRI+KNLR+C DCH K +S YG +I++ D
Sbjct: 821 CGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCL 880
Query: 595 HHFKNGTCSCNDFW 608
HHFKNG CSC D+W
Sbjct: 881 HHFKNGDCSCKDYW 894
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 206/427 (48%), Gaps = 42/427 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + L +W+ +I Y +R + LFR M+ +LPD F P +++GC+ V+ G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K IH V+K+G SS + + NS++ YA+
Sbjct: 201 KVIHSVVIKLGM-------SSCLRVS------------------------NSILAVYAKC 229
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMI 176
G ++ A K F M RD W ++L + GK E A E+ +M K+ V+WN +I
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 177 NGYMKSGKINLARQLFGQMPG----RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
GY + GK + A L +M ++ +W +MISG NG +A+++F + G++
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P+ VTI+SA+SA S L V+ G +HS VK F D ++G SL++MYSKCG +E A V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F ++ NK + W ++I G G +A ELF M+ ++P+ IT+ +++ G
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR---PNKVIWMS 409
E F M + K+ + ++ + G +A + M PN V +S
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 410 LLSSSRN 416
LL + N
Sbjct: 530 LLPACAN 536
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 187/376 (49%), Gaps = 54/376 (14%)
Query: 54 LHAVQEGKQIH-GYVLKIGFGF----DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVV 108
L + + IH G +L FG D FV++ L++MYAK G + ARKVFD M +R++
Sbjct: 88 LESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLF 147
Query: 109 SWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM 164
+W+++I Y+R KLF M D F + +L G A CG VEA + + +
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 165 PKKSSVSW----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
K S N+++ Y K G+++ A + F +M R++I+WNS++ Y NG+ EA+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
EL + + KEG+ P VT W LI Y
Sbjct: 268 ELVKEMEKEGISPGLVT------------------W-----------------NILIGGY 292
Query: 281 SKCGSIESALAVFKAIA----NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHA 336
++ G ++A+ + + + + WTA+I GL +G+ QAL++F +M G+ P+A
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 337 ITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
+T + ++ACS ++++G++ + + + + V LVD+ + G L+ A+ + +
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAV-KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 397 SMPMRPNKVIWMSLLS 412
S+ + + W S+++
Sbjct: 412 SVKNK-DVYTWNSMIT 426
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 4/261 (1%)
Query: 213 NGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL 272
NG LEA + + L ++G T L L + + GR +H+ + D +
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFV 117
Query: 273 GTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
T L+ MY+KCG I A VF ++ + L W+A+I + +LF M + G+
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAK 392
P F +L C++ G V+ G K ++ + + + ++ + + G L A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 393 NIIESMPMRPNKVIWMS-LLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA 451
M R + + W S LL+ +N + E E E + +L Y
Sbjct: 237 KFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 452 GKWDKVSHVREMMKERGVLKD 472
GK D + + M+ G+ D
Sbjct: 296 GKCDAAMDLMQKMETFGITAD 316
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 328/639 (51%), Gaps = 46/639 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW +I+ YV + LF ML H P+ FTL V+ C + G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSCR----YEPG 176
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARK---VFDKMVDRDVVSWNSLIDGY 117
KQ+HG LK+G +V +++++MY + + A + VF+ + +++V+WNS+I +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 118 ARNGNVEVAMKLFDEMPSRD-AFTWTALLD--------------GLAKCGKVEAAREVFD 162
+ A+ +F M S F LL+ ++KC + V
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 163 QMPKKSSVS------WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGR 215
+ ++ V+ ++ M+ Y K LF +M R++++WN +I+ + +
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYK------LFMEMSHCRDIVAWNGIITAFAVYDP 350
Query: 216 FLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
A+ LF L +E L P T S L A +GL + IH+ ++K F D VL S
Sbjct: 351 -ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
LI Y+KCGS++ + VF + ++ + W +++ +HG D L +F +M + P
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
+ TFI +L+ACSH G V+EG + F M + + +P + HY C++D+L RA +A+ +I
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526
Query: 396 ESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE-ADPDATGCYTLLSNIYAAAGKW 454
+ MPM P+ V+W++LL S R HGN +G+ AA L E +P + Y +SNIY A G +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF 586
Query: 455 DKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLA 514
++ + + M+ V K+ S E K++ F G + P +A+Y +L+ + LK
Sbjct: 587 NEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEM 646
Query: 515 GHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTP-----IRIMKNLRVCN 569
G+VP+ +LA++F ++ + + I+IMKN R+C
Sbjct: 647 GYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICI 706
Query: 570 DCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
DCH KL S + G+EI++RD++RFHHFK+ +CSCND+W
Sbjct: 707 DCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 190/421 (45%), Gaps = 32/421 (7%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFV--QSSLVNMYAKWGEMGLARKVFDKMVD 104
+ + C+ + +G +H ++L + + + V + L+NMYAK G + AR+VFD M +
Sbjct: 65 LFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPE 124
Query: 105 RDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR---DAFTWTALLDGLAKCGKVEAAREVF 161
R+VVSW +LI GY + GN + LF M S + FT +++L + E ++V
Sbjct: 125 RNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYEPGKQVH 180
Query: 162 DQMPKK----SSVSWNAMINGYMKSGKINLARQ---LFGQMPGRNLISWNSMISGYQLNG 214
K S NA+I+ Y + A + +F + +NL++WNSMI+ +Q
Sbjct: 181 GLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCN 240
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR------WIHSFMVKHCFDL 268
+A+ +F + +G+ T+L+ S++ + L +HS VK
Sbjct: 241 LGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVT 300
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIAN----KKLGHWTAIIVGLGMHGLADQALELF 324
+ T+LI++YS+ +E +K + + W II ++ ++A+ LF
Sbjct: 301 QTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLF 357
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
++R+ + P TF VL AC+ +I + TV + L+ +
Sbjct: 358 GQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN-NSLIHAYAK 416
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLL 444
G L + + M R + V W S+L + HG ++ ++ +PD+ LL
Sbjct: 417 CGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVD-SILPVFQKMDINPDSATFIALL 474
Query: 445 S 445
S
Sbjct: 475 S 475
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 270/484 (55%), Gaps = 40/484 (8%)
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWN 111
R+ + E K+I+ ++ G F+ + +V+ K +M A ++F+++ + +V +N
Sbjct: 18 QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYN 77
Query: 112 SLIDGYARNGNVEVAMKLFD-------EMPSRDAF------------------------- 139
S+I Y N ++++ E+P R F
Sbjct: 78 SIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK 137
Query: 140 --------TWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQL 191
T AL+D K + A +VFD+M ++ +SWN++++GY + G++ A+ L
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 192 FGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVL 251
F M + ++SW +MISGY G ++EAM+ F + G+ P ++++S L + + L L
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 252 GNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGL 311
G+WIH + + F + +LIEMYSKCG I A+ +F + K + W+ +I G
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 312 GMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPT 371
HG A A+E F EM+R +KP+ ITF+G+L+ACSH G+ EG + FDMM +Y+I P
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 372 VEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLI 431
+EHYGCL+D+L RAG L++A I ++MPM+P+ IW SLLSS R GNL++ A +L+
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 432 EADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGD 491
E +P+ G Y LL+NIYA GKW+ VS +R+M++ + K G S++E + F+ GD
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGD 497
Query: 492 KSHP 495
S P
Sbjct: 498 NSKP 501
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 183/362 (50%), Gaps = 46/362 (12%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQEGKQ 62
P + +N II Y HN D + +++Q+L LPD FT P + K C+ L + GKQ
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+HG++ K G F +++L++MY K+ ++ A KVFD+M +RDV+SWNSL+ GYAR G
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSV------ 170
++ A LF M + +WTA++ G G A + F +M P + S+
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 171 ----------SW-----------------NAMINGYMKSGKINLARQLFGQMPGRNLISW 203
W NA+I Y K G I+ A QLFGQM G+++ISW
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSFMV 262
++MISGY +G A+E F + + + P+ +T L LSA S + + G R+ M+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD--MM 368
Query: 263 KHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAIIVGLGMHGLADQ 319
+ + ++ + LI++ ++ G +E A+ + K + K W +++ G D
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Query: 320 AL 321
AL
Sbjct: 429 AL 430
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 103/229 (44%), Gaps = 22/229 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M ++SW+ +IS Y ++ ++ A+ F +M + P+G T ++ CS + QEG
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Query: 61 KQIHGYVLKIGFGFDKFVQ--SSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGY 117
+ +++ + + ++ L+++ A+ G++ A ++ M + D W SL+
Sbjct: 362 LRYFD-MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 118 ARNGNVEVAMKLFD---EMPSRDAFTWTALLDGLAKCGKVEAA--------REVFDQMPK 166
GN++VA+ D E+ D + L + A GK E E + P
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 167 KSSVSWNAMINGYMKSG-------KINLARQLFGQMPGRNLISWNSMIS 208
S + N ++ ++ +I++ QLF +++I+ N+ ++
Sbjct: 481 GSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVITNNNALA 529
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 283/511 (55%), Gaps = 24/511 (4%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
+N +IS +V N DA+ +R+M + +LPD +T P ++KG + + + K++HG
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAF 187
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD-VVSWNSLIDGYARNGNVEVAM 127
K+GF D +V S LV Y+K+ + A+KVFD++ DRD V WN+L++GY++ E A+
Sbjct: 188 KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDAL 247
Query: 128 KLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGY 179
+F +M T T++L G ++ R + K S V NA+I+ Y
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
KS + A +F M R+L +WNS++ + G + LFE +L G+ P VT+
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLT 367
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG---------TSLIEMYSKCGSIESAL 290
+ L LA L GR IH +M+ + G+L SL++MY KCG + A
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMI-----VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF ++ K W +I G G+ + AL++F M R G+KP ITF+G+L ACSH G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
++EG M Y I+PT +HY C++D+L RA L++A + S P+ N V+W S+
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
LSS R HGN ++ A L E +P+ G Y L+SN+Y AGK+++V VR+ M+++ V
Sbjct: 543 LSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIY 501
K GCS + + ++ F G+++HP+ K+I+
Sbjct: 603 KTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 195/389 (50%), Gaps = 35/389 (8%)
Query: 34 HHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDK-FVQSSLVNMYAKWGEM 92
HH++ T ++ C++ G+QIHG++++ GF D +SLVNMYAK G M
Sbjct: 57 HHNVA----TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLM 112
Query: 93 GLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDG- 147
A VF +RDV +N+LI G+ NG+ AM+ + EM + D +T+ +LL G
Sbjct: 113 RRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS 171
Query: 148 ----LAKCGKVE--AAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGR-NL 200
L+ KV A + FD + ++ Y K + A+++F ++P R +
Sbjct: 172 DAMELSDVKKVHGLAFKLGFDS----DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDS 227
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
+ WN++++GY RF +A+ +F + +EG+ S TI S LSA + + NGR IH
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGL 287
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
VK D V+ +LI+MY K +E A ++F+A+ + L W +++ G D
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGT 347
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEH------ 374
L LF M G++P +T VL C + +G + I+ Y IV + +
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE-----IHGYMIVSGLLNRKSSNE 402
Query: 375 --YGCLVDILCRAGHLQQAKNIIESMPMR 401
+ L+D+ + G L+ A+ + +SM ++
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 24/334 (7%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V WN +++ Y R DALL+F +M + T+ V+ + + G+ IHG
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGL 287
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+K G G D V ++L++MY K + A +F+ M +RD+ +WNS++ + G+ +
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGT 347
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVSW--NA 174
+ LF+ M D T T +L + + RE+ M +KSS + N+
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ Y+K G + AR +F M ++ SWN MI+GY + A+++F + + G+ P
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS-----LIEMYSKCGSIESA 289
+T + L A S L GR + M + +L TS +I+M + +E A
Sbjct: 468 EITFVGLLQACSHSGFLNEGRNFLAQMET----VYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 290 --LAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
LA+ K I + + W +I+ +HG D AL
Sbjct: 524 YELAISKPICDNPV-VWRSILSSCRLHGNKDLAL 556
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + L +WN ++ + + + L LF +ML + PD TL V+ C RL ++++G
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 61 KQIHGYVLKIGF----GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
++IHGY++ G ++F+ +SL++MY K G++ AR VFD M +D SWN +I+G
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING 442
Query: 117 YARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK-----K 167
Y E+A+ +F M D T+ LL + G + R QM
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNG 214
+S + +I+ ++ K+ A +L P N + W S++S +L+G
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHG 550
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 161 FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
D P+ + +++N Y K G + A +FG R++ +N++ISG+ +NG L+AM
Sbjct: 92 LDDSPRAGT----SLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAM 146
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
E + + G++P T S L + L + + +H K FD D +G+ L+ Y
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGSGLVTSY 205
Query: 281 SKCGSIESALAVFKAIANKKLG-HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
SK S+E A VF + ++ W A++ G + AL +F +MR G+ T
Sbjct: 206 SKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTI 265
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
VL+A + G +D G + + V L+D+ ++ L++A +I E+M
Sbjct: 266 TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS-NALIDMYGKSKWLEEANSIFEAMD 324
Query: 400 MRPNKVIWMSLL 411
R + W S+L
Sbjct: 325 ER-DLFTWNSVL 335
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 253 NGRWIHSFMVKHCF-DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGL 311
+G+ IH FMV+ F D GTSL+ MY+KCG + A+ VF G + A+I G
Sbjct: 78 SGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFG-YNALISGF 136
Query: 312 GMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPT 371
++G A+E + EMR G+ P TF +L L D K + +K+
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGL---AFKLGFD 192
Query: 372 VEHY--GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+ Y LV + ++ A+ + + +P R + V+W +L++
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 276/518 (53%), Gaps = 20/518 (3%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN +++ Y N AL LF M +LPD FTL VI CS L GK +H +
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
K ++S+L+ +Y+K G A VF M ++D+V+W SLI G +NG + A+K
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 129 LFDEM--------PSRDAFTWTALLDGLAKCGKVEAAR---EVFDQMPKKSSV----SWN 173
+F +M P D T C +EA R +V M K V +
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVT-----NACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
++I+ Y K G +A ++F M N+++WNSMIS Y N +++LF ++L +G+ P
Sbjct: 516 SLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
V+I S L A+S A L G+ +H + ++ D L +LI+MY KCG + A +F
Sbjct: 576 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF 635
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
K + +K L W +I G G HG AL LF EM++ G P +TF+ +++AC+H G V+
Sbjct: 636 KKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVE 695
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
EG F+ M +Y I P +EHY +VD+L RAG L++A + I++MP+ + IW+ LLS+
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Query: 414 SRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
SR H N+E+G +A L+ +P+ Y L N+Y AG ++ + + +MKE+G+ K
Sbjct: 756 SRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQP 815
Query: 474 GCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKL 511
GCS +E + N F G S P I+ L + +
Sbjct: 816 GCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 226/462 (48%), Gaps = 25/462 (5%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAV--QEGKQIHGY 66
WN +I Y R + + FR+ML + PD F+L V+ + +EGKQIHG+
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYARNGNVEV 125
+L+ D F++++L++MY K+G A +VF ++ D+ +VV WN +I G+ +G E
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 126 AMKLFDEMPSRD---AFTWTALLDGLAKCGKVEAA---REVFDQMPK----KSSVSWNAM 175
++ L+ M +++ T+ L C + E + R++ + K ++
Sbjct: 256 SLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
++ Y K G + A +F + + L WN+M++ Y N A++LF + ++ ++P
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T+ + +S S L + G+ +H+ + K + ++L+ +YSKCG A VFK+
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMR--RIGMKPHAITFIGVLNACSHKGLVD 353
+ K + W ++I GL +G +AL++F +M+ +KP + V NAC+ +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
G + MI + +V V L+D+ + G + A + SM N V W S++S
Sbjct: 494 FGLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISC 551
Query: 414 -SRNHGNLEIGEYAAHNLIEAD---PDATGCYTLLSNIYAAA 451
SRN NL NL+ + PD+ ++L I + A
Sbjct: 552 YSRN--NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 194/399 (48%), Gaps = 22/399 (5%)
Query: 42 FTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFD- 100
FT P ++K CS L + GK IHG V+ +G+ +D F+ +SLVNMY K G + A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 101 ------KMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAK 150
+ RDV WNS+IDGY + + + F M DAF+ + ++ + K
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 151 CG--KVEAAREVFDQMPKKS----SVSWNAMINGYMKSGKINLARQLFGQMPGR-NLISW 203
G + E +++ M + S S A+I+ Y K G A ++F ++ + N++ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
N MI G+ +G +++L+ + + + AL A S G GR IH +VK
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
D + TSL+ MYSKCG + A VF + +K+L W A++ + AL+L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 324 FMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF-DMMINEYKIVPTVEHYGCLVDIL 382
F MR+ + P + T V++ CS GL + G ++ + T+E L+ +
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLY 418
Query: 383 CRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
+ G A + +SM + + V W SL+S +G +
Sbjct: 419 SKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFK 456
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +V+WN +ISCY N+ ++ LF ML + PD ++ V+ S ++ +G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K +HGY L++G D ++++L++MY K G A +F KM + +++WN +I GY +
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 121 GNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA-- 174
G+ A+ LFDEM S D T+ +L+ G VE + +F+ M + + N
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 175 ---MINGYMKSGKINLARQLFGQMP 196
M++ ++G + A MP
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMP 741
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 274/504 (54%), Gaps = 10/504 (1%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V+W II+ VH R + L F +M + L D +T +K C+ L V+ GK IH +
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN---- 122
V+ GF V +SL MY + GEM +F+ M +RDVVSW SLI Y R G
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 123 VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ-----MPKKSSVSWNAMIN 177
VE +K+ + + T+ ++ A ++ ++ + SVS N+M+
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS-NSMMK 353
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y G + A LF M R++ISW+++I GY G E + F + + G P+
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ S LS +AV+ GR +H+ + + + + +SLI MYSKCGSI+ A +F
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ TA+I G HG + +A++LF + ++G +P ++TFI VL AC+H G +D G
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
F+MM Y + P EHYGC+VD+LCRAG L A+ +I M + + V+W +LL + +
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 418 GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
G++E G AA ++E DP L+NIY++ G ++ ++VR+ MK +GV+K+ G S
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 478 VEHRGKLNRFIVGDKSHPQTKAIY 501
++ + ++ F+ GD+ HPQ++ IY
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIY 677
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 219/461 (47%), Gaps = 43/461 (9%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQM--LHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
+VSW II YV + S++AL+LF M + H + PD L V+K C + + G+ +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H Y +K +V SSL++MY + G++ + +VF +M R+ V+W ++I G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 124 EVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NAM 175
+ + F EM D +T+ L A +V+ + + + + V+ N++
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
Y + G++ LF M R+++SW S+I Y+ G+ ++A+E F + + P+
Sbjct: 251 ATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T S SA + L+ L G +H ++ + + S+++MYS CG++ SA +F+
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ + + W+ II G G ++ + F MR+ G KP +L+ + +++ G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430
Query: 356 NK------CFDM---------MINEYKIVPTVEH----YG-----------CLVDILCRA 385
+ CF + +IN Y +++ +G +++
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 386 GHLQQAKNIIE---SMPMRPNKVIWMSLLSSSRNHGNLEIG 423
G ++A ++ E + RP+ V ++S+L++ + G L++G
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 76 KFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLF----- 130
KF +S + G + AR+VFDKM D+VSW S+I Y N + A+ LF
Sbjct: 40 KFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV 99
Query: 131 -DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMINGYMKSGKI 185
D S D + +L + + + K S +S +++++ Y + GKI
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
+ + ++F +MP RN ++W ++I+G GR+ E + F + + + T AL A
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWT 305
+GL + G+ IH+ ++ F + SL MY++CG ++ L +F+ ++ + + WT
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 306 AIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
++IV G +A+E F++MR + P+ TF + +AC+
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 181/410 (44%), Gaps = 45/410 (10%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW +I Y + A+ F +M + + P+ T + C+ L + G
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+H VL +G V +S++ MY+ G + A +F M RD++SW+++I GY +
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 121 GNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQM----PKKSSVSW 172
G E K F M F +LL +E R+V +++S
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+++IN Y K G I A +FG+ +++S +MI+GY +G+ EA++LFE LK G
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P VT +S L+A + H LD LG M + ++ A
Sbjct: 510 PDSVTFISVLTACT-----------------HSGQLD--LGFHYFNMMQETYNMRPAKE- 549
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
H+ ++ L G A ++ EM K + + +L AC KG +
Sbjct: 550 ----------HYGCMVDLLCRAGRLSDAEKMINEM---SWKKDDVVWTTLLIACKAKGDI 596
Query: 353 DEGNKCFDMMINEYKIVPT-VEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
+ G + + ++ ++ PT L +I G+L++A N+ ++M +
Sbjct: 597 ERGRRAAERIL---ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 275/506 (54%), Gaps = 38/506 (7%)
Query: 43 TLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
TL V++ C + V IH +++ D FV L+ + + + A VF +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDG----------- 147
+ +V + ++IDG+ +G + L+ M D + T++L
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 148 --------------------LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINL 187
K G++ A+++FD+MP + V+ MIN Y + G I
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
A +LF + ++ + W +MI G N +A+ELF + E + + T + LSA S
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
L L GRW+HSF+ +L +G +LI MYS+CG I A VF+ + +K + + +
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 327
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I GL MHG + +A+ F +M G +P+ +T + +LNACSH GL+D G + F+ M +
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 387
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAA 427
+ P +EHYGC+VD+L R G L++A IE++P+ P+ ++ +LLS+ + HGN+E+GE A
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 428 HNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRF 487
L E++ +G Y LLSN+YA++GKW + + +RE M++ G+ K+ GCS +E +++ F
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEF 507
Query: 488 IVGDKSHPQTKAIYAKLREMSKKLKL 513
+VGD +HP +AIY +L+E+++ L+
Sbjct: 508 LVGDIAHPHKEAIYQRLQELNRILRF 533
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 32/296 (10%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V W +I V N N AL LFR+M ++ + FT CV+ CS L A++ G+ +H +
Sbjct: 221 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V FV ++L+NMY++ G++ AR+VF M D+DV+S+N++I G A +G A
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMIN 177
+ F +M +R + T ALL+ + G ++ EVF+ M + +V + +++
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 178 GYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK---EGLMP 233
+ G++ A + +P + I +++S +++G MEL E + K E P
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN----MELGEKIAKRLFESENP 456
Query: 234 SHVT--ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
T +LS L A S G+W S ++ G IE C +IE
Sbjct: 457 DSGTYVLLSNLYASS-------GKWKESTEIRESMRDSG------IEKEPGCSTIE 499
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 284/512 (55%), Gaps = 9/512 (1%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
+N +I Y ++ L L+ QM+ + PD T IK C +++G+ + +
Sbjct: 84 YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
G+ D FV SS++N+Y K G+M A +F KM RDV+ W +++ G+A+ G A++
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 129 LFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYM 180
+ EM + RD LL G + R V + + + V ++++ Y
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
K G I +A ++F +M + +SW S+ISG+ NG +A E + G P VT++
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVG 323
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
L A S + L GR +H +++K LD V T+L++MYSKCG++ S+ +F+ + K
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
L W +I G+HG + + LF++M ++P TF +L+A SH GLV++G F
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
+MIN+YKI P+ +HY CL+D+L RAG +++A ++I S + IW++LLS NH NL
Sbjct: 443 VMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNL 502
Query: 421 EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEH 480
+G+ AA+ +++ +PD+ G TL+SN +A A KW +V+ VR++M+ + K G S +E
Sbjct: 503 SVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEV 562
Query: 481 RGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
G+L F++ D SH + + LR + +++
Sbjct: 563 NGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 189/370 (51%), Gaps = 18/370 (4%)
Query: 62 QIHGYVLKIGFGFD-KFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
QIH +V+ G + + L+ + GE+ ARKVFD++ R V +NS+I Y+R
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 121 GNVEVAMKLFDEM------PSRDAFTWT--ALLDGLAKCGKVEAAREVFDQMPKKSSVSW 172
N + ++L+D+M P FT T A L GL + D K
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++++N YMK GK++ A LFG+M R++I W +M++G+ G+ L+A+E + + EG
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
V +L L A L GR +H ++ + ++ V+ TSL++MY+K G IE A V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F + K W ++I G +GLA++A E +EM+ +G +P +T +GVL ACS G +
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 353 DEGNKCFDMMINEY---KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G ++ + ++ T L+D+ + G L ++ I E + R + V W +
Sbjct: 335 KTGRLVHCYILKRHVLDRVTATA-----LMDMYSKCGALSSSREIFEHVG-RKDLVCWNT 388
Query: 410 LLSSSRNHGN 419
++S HGN
Sbjct: 389 MISCYGIHGN 398
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 163/319 (51%), Gaps = 9/319 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K ++ W +++ + +S A+ +R+M + D + +++ L + G
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HGY+ + G + V++SLV+MYAK G + +A +VF +M+ + VSW SLI G+A+N
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 121 GNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKK---SSVSWN 173
G A + EM S D T +L ++ G ++ R V + K+ V+
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT 356
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
A+++ Y K G ++ +R++F + ++L+ WN+MIS Y ++G E + LF + + + P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 234 SHVTILSALSAVSGLAVLGNGR-WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
H T S LSA+S ++ G+ W + K+ LI++ ++ G +E AL +
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
Query: 293 FKAIA-NKKLGHWTAIIVG 310
+ + L W A++ G
Sbjct: 477 INSEKLDNALPIWVALLSG 495
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 271/493 (54%), Gaps = 12/493 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M ++SWN +IS Y N NDAL++F M++ + D T+ ++ C L ++ G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H V + G V+++LVNMY K G M AR VFD+M RDV++W +I+GY +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREV----FDQMPKKSSVSW 172
G+VE A++L M +A T +L+ KV + + Q +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++I+ Y K +++L ++F + W+++I+G N +A+ LF+ + +E +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P+ T+ S L A + LA L IH ++ K F T L+ +YSKCG++ESA +
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 293 FKAIANKKLGH----WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
F I K W A+I G GMHG AL++FMEM R G+ P+ ITF LNACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
GLV+EG F M+ YK + HY C+VD+L RAG L +A N+I ++P P +W
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
+LL++ H N+++GE AA+ L E +P+ TG Y LL+NIYAA G+W + VR MM+ G
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVG 657
Query: 469 VLKDAGCSIVEHR 481
+ K G S +E R
Sbjct: 658 LRKKPGHSTIEIR 670
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 234/436 (53%), Gaps = 22/436 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL--LPDGFTLPCVIKGCSRLHAVQ 58
M + +L+S+N++I YV +DA+ +F +M+ + +PDG+T P V K L +++
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G +HG +L+ FG DK+VQ++L+ MY +G++ +AR VFD M +RDV+SWN++I GY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
RNG + A+ +FD M + D T ++L +E R V + +K
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
NA++N Y+K G+++ AR +F +M R++I+W MI+GY +G A+EL ++ EG
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P+ VTI S +S + +G+ +H + V+ D ++ TSLI MY+KC ++
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF + G W+AII G + L AL LF MRR ++P+ T +L A +
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAA 432
Query: 351 LVDEGNK----CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI---IESMPMRPN 403
L D C+ + + + +++ LV + + G L+ A I I+ +
Sbjct: 433 LADLRQAMNIHCY---LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 404 KVIWMSLLSSSRNHGN 419
V+W +L+S HG+
Sbjct: 490 VVLWGALISGYGMHGD 505
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 4/245 (1%)
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL--MPSHV 236
Y G I AR+LF +MP +L+S+N +I Y G + +A+ +F ++ EG+ +P
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T A L + G +H +++ F D + +L+ MY G +E A VF +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
N+ + W +I G +G + AL +F M + T + +L C H ++ G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
++ E ++ +E LV++ + G + +A+ + + M R + + W +++
Sbjct: 239 NVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTE 296
Query: 417 HGNLE 421
G++E
Sbjct: 297 DGDVE 301
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 282/539 (52%), Gaps = 77/539 (14%)
Query: 37 LLPDGFTLP-----CVIKGCSRLHAVQEGKQIHGYVLKIGFG------------------ 73
L G LP +++ C ++++GK IH ++ GF
Sbjct: 37 LTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCG 96
Query: 74 --------FDK------FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
FD+ + +++V+ Y K G + AR VFD M +RDVVSWN+++ GYA+
Sbjct: 97 KPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ 156
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALL------------------------------ 145
+GN+ A+ + E + F++ LL
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVL 216
Query: 146 -----DGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
D AKCG++E+A+ FD+M K W +I+GY K G + A +LF +MP +N
Sbjct: 217 SCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP 276
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
+SW ++I+GY G A++LF ++ G+ P T S L A + +A L +G+ IH +
Sbjct: 277 VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY 336
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK-KLGHWTAIIVGLGMHGLADQ 319
M++ + ++ +SLI+MYSK GS+E++ VF+ +K W +I L HGL +
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHK 396
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
AL + +M + ++P+ T + +LNACSH GLV+EG + F+ M ++ IVP EHY CL+
Sbjct: 397 ALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLI 456
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG 439
D+L RAG ++ IE MP P+K IW ++L R HGN E+G+ AA LI+ DP+++
Sbjct: 457 DLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSA 516
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTK 498
Y LLS+IYA GKW+ V +R +MK+R V K+ S +E K+ F V D SH +
Sbjct: 517 PYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHAR 575
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 272/483 (56%), Gaps = 11/483 (2%)
Query: 8 SWNLIISCYVHNHRS--NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
SWN I+S Y + +D LLL+ +M H D F L IK C L ++ G IHG
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG 133
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+K G D +V SLV MYA+ G M A+KVFD++ R+ V W L+ GY +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 126 AMKLF----DEMPSRDAFTWTALLDGLA-----KCGKVEAAREVFDQMPKKSSVSWNAMI 176
+LF D + DA T L+ K GK + +S ++I
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y+K ++ AR+LF RN++ W ++ISG+ R +EA +LF +L+E ++P+
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T+ + L + S L L +G+ +H +M+++ ++D V TS I+MY++CG+I+ A VF +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ + W+++I G++GL ++AL+ F +M+ + P+++TF+ +L+ACSH G V EG
Sbjct: 374 PERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
K F+ M +Y +VP EHY C+VD+L RAG + +AK+ I++MP++P W +LLS+ R
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
H +++ A L+ +P+ + Y LLSNIYA AG W+ V+ VR M +G K G S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Query: 477 IVE 479
E
Sbjct: 554 ATE 556
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V W +IS + R+ +A LFRQML +LP+ TL ++ CS L +++ GK +HG
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
Y+++ G D +S ++MYA+ G + +AR VFD M +R+V+SW+S+I+ + NG E
Sbjct: 337 YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEE 396
Query: 126 AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV-----SWNAMI 176
A+ F +M S+ ++ T+ +LL + G V+ + F+ M + V + M+
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 177 NGYMKSGKINLARQLFGQMPGRNLIS-WNSMISGYQLNGRFLEAMELFEVLLK-EGLMPS 234
+ ++G+I A+ MP + + S W +++S +++ A E+ E LL E S
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSS 516
Query: 235 HVTILSALSAVSGL 248
+LS + A +G+
Sbjct: 517 VYVLLSNIYADAGM 530
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 45/274 (16%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V W +++ Y+ + + LF M L D TL C++K C + A + GK +HG
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 67 VLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++ F ++Q+S+++MY K + ARK+F+ VDR+VV W +LI G+A+
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 126 AMKLFDEM------PSR---------------------------------DAFTWTALLD 146
A LF +M P++ DA +T+ +D
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 147 GLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL----IS 202
A+CG ++ AR VFD MP+++ +SW++MIN + +G A F +M +N+ ++
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSH 235
+ S++S +G E + FE + ++ G++P
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 216/524 (41%), Gaps = 89/524 (16%)
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV--DRDVVS 109
S+ + +Q+H V+ GF + + SSL N Y + + A F+++ R+ S
Sbjct: 15 SQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS 74
Query: 110 WNSLIDGYARNGNV--EVAMKLFDEMP--------------------------------- 134
WN+++ GY+++ + L++ M
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 135 ------SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLA 188
+D + +L++ A+ G +E+A++VFD++P ++SV W ++ GY+K
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK------- 187
Query: 189 RQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL 248
+ + P E LF ++ GL +T++ + A +
Sbjct: 188 ---YSKDP---------------------EVFRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 249 AVLGNGRWIHSFMVKHCF-DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
G+ +H ++ F D L S+I+MY KC +++A +F+ ++ + WT +
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I G A +A +LF +M R + P+ T +L +CS G + G MI
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAA 427
+ V ++ +D+ R G++Q A+ + + MP R N + W S++++ +G E
Sbjct: 344 EMDAV-NFTSFIDMYARCGNIQMARTVFDMMPER-NVISWSSMINAFGINGLFEEALDCF 401
Query: 428 HNLIEAD--PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA---GCSI----- 477
H + + P++ +LLS + + M ++ GV+ + C +
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 478 VEHRGKLNRFIVGDKSHPQTKAIYAKLR--EMSKKLKLAGHVPD 519
G+ FI P A A L + K++ LAG + +
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 272/497 (54%), Gaps = 23/497 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + VSW+ +I+ + N + A++LFR+M D P L ++ G + + E
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEA 217
Query: 61 KQIHGYVLKIGFGFDKFVQS--SLVNMYAKWGEMGLARKVFDKMVD-------------- 104
+ G + G + V + +L+ Y + G++ AR +FD++ D
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF 277
Query: 105 -RDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ 163
++VVSWNS+I Y + G+V A LFD+M RD +W ++DG ++E A +F +
Sbjct: 278 CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 164 MPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
MP + + SWN M++GY G + LAR F + P ++ +SWNS+I+ Y+ N + EA++LF
Sbjct: 338 MPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
+ EG P T+ S LSA +GL L G +H +VK D + +LI MYS+C
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRC 456
Query: 284 GSIESALAVFKAIANKK-LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
G I + +F + K+ + W A+I G HG A +AL LF M+ G+ P ITF+ V
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
LNAC+H GLVDE F M++ YKI P +EHY LV++ G ++A II SMP P
Sbjct: 517 LNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEP 576
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+K +W +LL + R + N+ + AA + +P+++ Y LL N+YA G WD+ S VR
Sbjct: 577 DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRM 636
Query: 463 MMKERGVLKDAGCSIVE 479
M+ + + K+ G S V+
Sbjct: 637 NMESKRIKKERGSSWVD 653
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 200/468 (42%), Gaps = 104/468 (22%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V+WN +IS YV N A LF D++P + V I GY
Sbjct: 72 VTWNTMISGYVKRREMNQARKLF------DVMP-------------KRDVVTWNTMISGY 112
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V G F + ARK+FD+M RD SWN++I GYA+N + A
Sbjct: 113 VSCGGIRF-----------------LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEA 155
Query: 127 MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----------------- 169
+ LF++MP R+A +W+A++ G + G+V++A +F +MP K S
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLS 215
Query: 170 --------------------VSWNAMINGYMKSGKINLARQLFGQMPG------------ 197
++N +I GY + G++ AR LF Q+P
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 198 ---RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
+N++SWNSMI Y G + A LF+ +K+ S T++ VS
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFD-QMKDRDTISWNTMIDGYVHVS-------- 326
Query: 255 RWIHSF-MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
R +F + + D ++ Y+ G++E A F+ K W +II
Sbjct: 327 RMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEK 386
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD--EGNKCFDMMINEYKIVPT 371
+ +A++LF+ M G KP T +L+A + GLV+ G + +++ ++P
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVK--TVIPD 442
Query: 372 VEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
V + L+ + R G + +++ I + M ++ + W +++ HGN
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 204/451 (45%), Gaps = 62/451 (13%)
Query: 21 RSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQS 80
RS LL+FR++L+ L C++ C+ + + GF +
Sbjct: 3 RSRSVLLIFRKVLYQ-----SSCLKCLL--CANSFSTSVSSSL---------GFR--ATN 44
Query: 81 SLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFT 140
+N + G + AR +F+K+ R+ V+WN++I GY + + A KLFD MP RD T
Sbjct: 45 KELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVT 104
Query: 141 WTALLDGLAKCGKV---EAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPG 197
W ++ G CG + E AR++FD+MP + S SWN MI+GY K+ +I A LF +MP
Sbjct: 105 WNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE 164
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL---AVLGNG 254
RN +SW++MI+G+ NG A+ LF + + P L AL V+GL L
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-----LCAL--VAGLIKNERLSEA 217
Query: 255 RWI---HSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN------------- 298
W+ + +V DL T LI Y + G +E+A +F I +
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNT-LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 299 --KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
K + W ++I G A LF +M+ I++ +++ H +++
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAF 332
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
F M N + +V G+++ A++ E P + + V W S++++
Sbjct: 333 ALFSEMPNR-----DAHSWNMMVSGYASVGNVELARHYFEKTPEK-HTVSWNSIIAAYEK 386
Query: 417 HGNLE--IGEYAAHNLIEADPDATGCYTLLS 445
+ + + + + N+ PD +LLS
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 274/484 (56%), Gaps = 11/484 (2%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V W +I+ YV N + L+LF +M +++L + +T +I C++L A+ +GK HG
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++K G + +SL++MY K G++ AR+VF++ D+V W ++I GY NG+V
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 126 AMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMIN 177
A+ LF +M + T ++L G +E R V K ++V+ NA+++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-NALVH 385
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K + A+ +F +++++WNS+ISG+ NG EA+ LF + E + P+ VT
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL--GTSLIEMYSKCGSIESALAVFKA 295
+ S SA + L L G +H++ VK F + GT+L++ Y+KCG +SA +F
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
I K W+A+I G G G +LELF EM + KP+ TF +L+AC H G+V+EG
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
K F M +Y P+ +HY C+VD+L RAG L+QA +IIE MP++P+ + + L
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
H ++GE +++ PD Y L+SN+YA+ G+W++ VR +MK+RG+ K AG
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 476 SIVE 479
S +E
Sbjct: 686 STME 689
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 205/426 (48%), Gaps = 12/426 (2%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P W +++ CY N S + + L+ ++ H D +K C+ L + GK+
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
IH ++K+ FD V + L++MYAK GE+ A KVF+ + R+VV W S+I GY +N
Sbjct: 164 IHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 123 VEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNA 174
E + LF+ M + +T+ L+ K + + + K SS +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ Y+K G I+ AR++F + +L+ W +MI GY NG EA+ LF+ + + P+
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
VTI S LS + L GR +H +K D + +L+ MY+KC A VF+
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
+ K + W +II G +G +AL LF M + P+ +T + +AC+ G +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 355 GNKCFDMMINEYKIVPTVEHYG-CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
G+ + + + H G L+D + G Q A+ I +++ + N + W +++
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGG 520
Query: 414 SRNHGN 419
G+
Sbjct: 521 YGKQGD 526
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 195/412 (47%), Gaps = 17/412 (4%)
Query: 45 PC--VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
PC ++ C+ + ++ +Q HG + G D + + LV++Y +G AR VFD++
Sbjct: 46 PCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQI 102
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR 158
+ D W ++ Y N +KL+D + D ++ L + ++ +
Sbjct: 103 PEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGK 162
Query: 159 EVFDQM---PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGR 215
++ Q+ P +V +++ Y K G+I A ++F + RN++ W SMI+GY N
Sbjct: 163 KIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 216 FLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
E + LF + + ++ + T + + A + L+ L G+W H +VK +L L TS
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L++MY KCG I +A VF ++ L WTA+IVG +G ++AL LF +M+ + +KP+
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
+T VL+ C ++ G + I V + LV + + + AK +
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN--ALVHMYAKCYQNRDAKYVF 400
Query: 396 ESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAH--NLIEADPDATGCYTLLS 445
E M + V W S++S +G++ + H N P+ +L S
Sbjct: 401 E-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/380 (41%), Positives = 240/380 (63%), Gaps = 3/380 (0%)
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP 196
D+F T L+ AK G + AR VFD+M K+ WNAMI GY + G + A +LF MP
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGR 255
+N+ SW ++ISG+ NG + EA+++F + K+ + P+H+T++S L A + L L GR
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK-LGHWTAIIVGLGMH 314
+ + ++ F + + + IEMYSKCG I+ A +F+ + N++ L W ++I L H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 315 GLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEH 374
G D+AL LF +M R G KP A+TF+G+L AC H G+V +G + F M +KI P +EH
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 375 YGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD 434
YGC++D+L R G LQ+A ++I++MPM+P+ V+W +LL + HGN+EI E A+ L + +
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 435 PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS-IVEHRGKLNRFIVGDKS 493
P G ++SNIYAA KWD V +R++MK+ + K AG S VE +++F V DKS
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 494 HPQTKAIYAKLREMSKKLKL 513
HP++ IY L E+ +++KL
Sbjct: 476 HPRSYEIYQVLEEIFRRMKL 495
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 182/404 (45%), Gaps = 77/404 (19%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
+N +I Y +H+ +++++L+ + L P T + + + + + +H
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
+ GF D F ++L+ YAK G + AR+VFD+M RDV WN++I GY R G+++ AM+
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 129 LFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----------------- 171
LFD MP ++ +WT ++ G ++ G A ++F M K SV
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 172 -----------------------WNAMINGYMKSGKINLARQLFGQMPG-RNLISWNSMI 207
NA I Y K G I++A++LF ++ RNL SWNSMI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 208 SGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD 267
+G+ EA+ LF +L+EG P VT + L A +H MV
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC-----------VHGGMV----- 333
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
V G L + + I + KL H+ +I LG G +A +L +
Sbjct: 334 ---VKGQELFKSMEEVHKI-----------SPKLEHYGCMIDLLGRVGKLQEAYDL---I 376
Query: 328 RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPT 371
+ + MKP A+ + +L ACS G V+ + + +K+ PT
Sbjct: 377 KTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEAL---FKLEPT 417
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLH-HDLLPDGFTLPCVIKGCSRLHAVQE 59
M + + SW +IS + N ++AL +F M + P+ T+ V+ C+ L ++
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD-RDVVSWNSLIDGYA 118
G+++ GY + GF + +V ++ + MY+K G + +A+++F+++ + R++ SWNS+I A
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 119 RNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
+G + A+ LF +M DA T+ LL G V +E+F M + +S
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 172 --WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+ MI+ + GK+ A L MP + + + W +++ +G A E L K
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 229 -EGLMPSHVTILSALSAVS 246
E P + I+S + A +
Sbjct: 414 LEPTNPGNCVIMSNIYAAN 432
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 51/272 (18%)
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
AR+LF +N +I Y ++ + E++ L+ +L +GL PSH T +A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI--------------------- 286
+ R +HS + F+ D T+LI Y+K G++
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 287 ----------ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR-IGMKPH 335
++A+ +F ++ K + WT +I G +G +AL++F+ M + +KP+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 336 AITFIGVLNACSHKGLVDEG---------NKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
IT + VL AC++ G ++ G N FD N Y T+E Y + G
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFD---NIYVCNATIEMYS-------KCG 264
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ AK + E + + N W S++ S HG
Sbjct: 265 MIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 291/593 (49%), Gaps = 84/593 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + V+WN +++ Y +A+ LF Q+ D PD ++ ++ C+ L V+ G
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFG 89
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFD-------------------- 100
++I V++ GF V +SL++MY K + A KVF
Sbjct: 90 RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYM 149
Query: 101 -------------KMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTA 143
+M R +WN +I G+A G +E + LF EM D +T+++
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSS 209
Query: 144 LLDGLA------------------------------------KCGKVEAAREVFDQMPKK 167
L++ + K G + A + +
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ VSWN++I+ MK G+ A ++F P +N+++W +MI+GY NG +A+ F ++
Sbjct: 270 TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K G+ H + L A SGLA+LG+G+ IH ++ F +G +L+ +Y+KCG I+
Sbjct: 330 KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIK 389
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A F IANK L W ++ G+HGLADQAL+L+ M G+KP +TFIG+L CS
Sbjct: 390 EADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCS 449
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES----MPMRPN 403
H GLV+EG F+ M+ +Y+I V+H C++D+ R GHL +AK++ + + N
Sbjct: 450 HSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSN 509
Query: 404 KVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREM 463
W +LL + H + E+G + L A+P + LLSN+Y + G+W + VR
Sbjct: 510 NSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRRE 569
Query: 464 MKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGH 516
M ERG+ K GCS +E +++ F+VGD SHP +L E+S+ L H
Sbjct: 570 MVERGMKKTPGCSWIEVGNQVSTFVVGDSSHP-------RLEELSETLNCLQH 615
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 178/416 (42%), Gaps = 83/416 (19%)
Query: 80 SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDA- 138
+S + AK G + AR+VFD M + D V+WN+++ Y+R G + A+ LF ++ DA
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 139 ---FTWTA-----------------------------------LLDGLAKCGKVEAAREV 160
+++TA L+D KC +A +V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 161 FDQM--PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLE 218
F M ++ V+W +++ YM + + A +F +MP R +WN MISG+ G+
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 219 AMELFEVLLKEGLMPSHVTILSALSAVSGLAV-LGNGRWIHSFMVKHCFD---------- 267
+ LF+ +L+ P T S ++A S + + GR +H+ M+K+ +
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 268 ---------------------LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTA 306
L V S+I+ K G E AL VF K + WT
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
+I G G +G +QAL F+EM + G+ + VL+ACS L+ G MI+
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK-----MIHGC 362
Query: 367 KIVPTVEHYG----CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
I + Y LV++ + G +++A + + + V W ++L + HG
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHG 417
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
V + I KSG+I ARQ+F MP + ++WN+M++ Y G EA+ LF L
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG----- 284
P + + LS + L + GR I S +++ F + SLI+MY KC
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 285 ----------------------------SIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
E+AL VF + + W +I G G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI----VPTV 372
+ L LF EM KP TF ++NACS D N + M++ + V
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 373 EHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
E ++ + G A +ES+ + +V W S++ + G E
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVL-TQVSWNSIIDACMKIGETE 288
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 273/514 (53%), Gaps = 32/514 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
M + +++W +I Y D LF +M D+ + TL + K C +E
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G QIHG V ++ FD F+ +SL++MY+K G MG A+ V
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV--------------------- 332
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGY 179
F M ++D+ +W +L+ GL + ++ A E+F++MP K VSW MI G+
Sbjct: 333 ----------FGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
G+I+ +LFG MP ++ I+W +MIS + NG + EA+ F +L++ + P+ T
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK 299
S LSA + LA L G IH +VK D + SL+ MY KCG+ A +F I+
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 300 KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF 359
+ + +I G +G +AL+LF + G +P+ +TF+ +L+AC H G VD G K F
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 360 DMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
M + Y I P +HY C+VD+L R+G L A N+I +MP +P+ +W SLLS+S+ H
Sbjct: 563 KSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 420 LEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVE 479
+++ E AA LIE +PD+ Y +LS +Y+ GK + + K + + KD G S +
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 480 HRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKL 513
+G+++ F+ GD+S + I L+ + K+++L
Sbjct: 683 LKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMEL 716
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 15/336 (4%)
Query: 91 EMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS--RDAFTWTALLDGL 148
++G A ++F + +++ VS+ ++I G+ R G + A L+ E P RD+ LL G
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGY 187
Query: 149 AKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMIS 208
+ GK A VF M K VS ++M++GY K G+I AR LF +M RN+I+W +MI
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL-SAVSGLAVLGNGRWIHSFMVKHCFD 267
GY G F + LF + +EG + + L+ + A G IH + + +
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE 307
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
D LG SL+ MYSK G + A AVF + NK W ++I GL +A ELF +M
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 328 RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGH 387
M +++ ++ S KG + + + F MM + I T ++ G+
Sbjct: 368 PGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA-----MISAFVSNGY 418
Query: 388 LQQAKNIIESMPMR---PNKVIWMSLLSSSRNHGNL 420
++A M + PN + S+LS++ + +L
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 257/464 (55%), Gaps = 43/464 (9%)
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDG-------- 147
++ VSW S I+ RNG + A K F +M + T+ ALL G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 148 ------------------------------LAKCGKVEAAREVFDQMPKKSSVSWNAMIN 177
+K G+ + AR VFD M K+SV+WN MI+
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
GYM+SG+++ A ++F +MP R+LISW +MI+G+ G EA+ F + G+ P +V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
I++AL+A + L L G W+H +++ F + + SLI++Y +CG +E A VF +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ + W ++IVG +G A ++L F +M+ G KP A+TF G L ACSH GLV+EG +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
F +M +Y+I P +EHYGCLVD+ RAG L+ A +++SMPM+PN+V+ SLL++ NH
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 418 G-NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
G N+ + E +L + + + Y +LSN+YAA GKW+ S +R MK G+ K G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDT 520
+E ++ F+ GD +H +T I L +S L+L G V +T
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 47/340 (13%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE--GKQ 62
T VSW I+ N R +A F M + P+ T ++ GC + E G
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 63 IHGYVLKIGFGFDK-FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+HGY K+G + V ++++ MY+K G AR VFD M D++ V+WN++IDGY R+G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 122 NVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAA------------------------ 157
V+ A K+FD+MP RD +WTA+++G K G E A
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 158 ---------------REVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
R V Q K + N++I+ Y + G + ARQ+F M R ++S
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
WNS+I G+ NG E++ F + ++G P VT AL+A S + ++ G + F +
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG--LRYFQI 332
Query: 263 KHC-FDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANK 299
C + + + L+++YS+ G +E AL + +++ K
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 25/271 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + L+SW +I+ +V +ALL FR+M + PD + + C+ L A+ G
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H YVL F + V +SL+++Y + G + AR+VF M R VVSWNS+I G+A N
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAAN 285
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
GN ++ F +M + DA T+T L + G VE F M +S
Sbjct: 286 GNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEH 345
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+ +++ Y ++G++ A +L MP + N + S+++ +G ++L E
Sbjct: 346 YGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN--------NIVLAER 397
Query: 231 LMPSHVTILSALSAVSGLAVLGN-----GRW 256
LM H+T L+ S S +L N G+W
Sbjct: 398 LM-KHLTDLNVKSH-SNYVILSNMYAADGKW 426
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 48/270 (17%)
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA----V 245
Q Q +SW S I+ NGR EA + F + G+ P+H+T ++ LS
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVL-GTSLIEMYSK---------------------- 282
SG LG+ +H + K D + V+ GT++I MYSK
Sbjct: 86 SGSEALGD--LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 283 ---------CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
G +++A +F + + L WTA+I G G ++AL F EM+ G+K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP----TVEHYGCLVDILCRAGHLQ 389
P + I LNAC++ G + F + ++ Y + V L+D+ CR G ++
Sbjct: 204 PDYVAIIAALNACTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 390 QAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
A+ + +M R V W S++ +GN
Sbjct: 259 FARQVFYNMEKR-TVVSWNSVIVGFAANGN 287
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 275/505 (54%), Gaps = 10/505 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH--DLLPDGFTLPCVIKGCSRLHAVQ 58
M + +W+ ++S Y R +A+ +F L + + V+ + V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G+QIH +K G + ++LV MY+K + A K+FD DR+ ++W++++ GY+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSV 170
+NG A+KLF M S +T +L+ + +E +++ + K +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+ A+++ Y K+G + AR+ F + R++ W S+ISGY N EA+ L+ + G
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
++P+ T+ S L A S LA L G+ +H +KH F L+ +G++L MYSKCGS+E
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGN 478
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF+ NK + W A+I GL +G D+ALELF EM GM+P +TF+ +++ACSHKG
Sbjct: 479 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
V+ G F+MM ++ + P V+HY C+VD+L RAG L++AK IES + +W L
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRIL 598
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
LS+ +NHG E+G YA L+ + Y LS IY A G+ V V + M+ GV
Sbjct: 599 LSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVS 658
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHP 495
K+ GCS +E + + + F+VGD HP
Sbjct: 659 KEVGCSWIELKNQYHVFVVGDTMHP 683
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 218/427 (51%), Gaps = 15/427 (3%)
Query: 6 LVSWNLIISCYVHN---HRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+VSWN +I+ Y N S + LFR+M D+LP+ +TL + K S L + G+Q
Sbjct: 80 VVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQ 139
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
H V+K+ D +V +SLV MY K G + KVF M +R+ +W++++ GYA G
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 123 VEVAMKLFD------EMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW---- 172
VE A+K+F+ E S + +TA+L LA V R++ K + +
Sbjct: 200 VEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
NA++ Y K +N A ++F RN I+W++M++GY NG LEA++LF + G+
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
PS TI+ L+A S + L G+ +HSF++K F+ T+L++MY+K G + A
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F + + + WT++I G + ++AL L+ M+ G+ P+ T VL ACS +
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+ G + I ++ V L + + G L+ + P + + V W +++S
Sbjct: 440 ELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMIS 497
Query: 413 SSRNHGN 419
++G
Sbjct: 498 GLSHNGQ 504
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 21/369 (5%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+ +HG +++ G + LVN YAK G++ A +F+ ++ +DVVSWNSLI GY++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 120 NGNVE---VAMKLFDEMPSRD----AFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS- 171
NG + M+LF EM ++D A+T + + R+ + K SS
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 172 ---WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL- 227
+++ Y K+G + ++F MP RN +W++M+SGY GR EA+++F + L
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 228 -KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
KE S + LS+++ +G GR IH +K+ L +L+ MYSKC S+
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
A +F + ++ W+A++ G +G + +A++LF M G+KP T +GVLNAC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 347 SHKGLVDEGNKCFDMMIN---EYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
S ++EG + ++ E + T LVD+ +AG L A+ + + R +
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATT----ALVDMYAKAGCLADARKGFDCLQER-D 387
Query: 404 KVIWMSLLS 412
+W SL+S
Sbjct: 388 VALWTSLIS 396
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/578 (29%), Positives = 312/578 (53%), Gaps = 13/578 (2%)
Query: 43 TLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
T +++ C RL +++ K+++G+++ GF ++++ + ++ M+ K G + AR++FD++
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLF----DEMPSRDAFTWTALLDGLAKCGKVEAAR 158
+R++ S+ S+I G+ GN A +LF +E+ + T+ +L A G + +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 159 EVFDQMPKKSSVSWN----AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
++ K V +I+ Y K G I AR F MP + ++WN++I+GY L+G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
EA+ L + G+ T+ + + LA L + H+ ++++ F+ + V T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+L++ YSK G +++A VF + K + W A++ G HG A++LF +M + P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+ +TF+ VL+AC++ GL ++G + F M + I P HY C++++L R G L +A
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKW 454
I P++ +W +LL++ R NLE+G A L P+ G Y ++ N+Y + GK
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 455 DKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDK--SHPQT--KAIYAKLREMSKK 510
+ + V E ++ +G+ C+ VE + + F+ GD+ S+ +T + IY K+ E+ ++
Sbjct: 545 AEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEE 604
Query: 511 LKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCND 570
+ G+ + Q L +LAI++GL+N P++I +N R+C +
Sbjct: 605 ISEYGY-SEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKN 663
Query: 571 CHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
CH V + +S + GRE++VRD SRFHHFK G CSC +W
Sbjct: 664 CHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 57/312 (18%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + T V+WN +I+ Y + S +AL L M + D FTL +I+ ++L ++
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQ H +++ GF + ++LV+ Y+KWG + AR VFDK+ ++++SWN+L+ GYA +
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 121 GNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQM------------ 164
G A+KLF++M + + T+ A+L A G E E+F M
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 165 ------------------------PKKSSVS-WNAMINGYMKSGKINLAR----QLFGQM 195
P K++V+ W A++N + L R +L+G
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
P + L ++ M + Y G+ EA + E L +G LS + A + + V G
Sbjct: 525 PEK-LGNYVVMYNMYNSMGKTAEAAGVLETLESKG--------LSMMPACTWVEV---GD 572
Query: 256 WIHSFMVKHCFD 267
HSF+ FD
Sbjct: 573 QTHSFLSGDRFD 584
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL-SAVSGLAVLGNGRWIHSFMVK 263
S I L RF EA ELFE+L V+ AL A L + + ++ FM+
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
+ F+ + + ++ M+ KCG I A +F I + L + +II G G +A EL
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 324 FMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILC 383
F M TF +L A + G + G + + + T G L+D+
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG-LIDMYS 270
Query: 384 RAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
+ G ++ A+ E MP + V W ++++ HG E
Sbjct: 271 KCGDIEDARCAFECMPEKTT-VAWNNVIAGYALHGYSE 307
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 235/373 (63%), Gaps = 2/373 (0%)
Query: 142 TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPG--RN 199
T L+ CG + AR++FD+M K WNA++ GY K G+++ AR L MP RN
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+SW +ISGY +GR EA+E+F+ +L E + P VT+L+ LSA + L L G I S
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
++ + L ++I+MY+K G+I AL VF+ + + + WT II GL HG +
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAE 334
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
AL +F M + G++P+ +TFI +L+ACSH G VD G + F+ M ++Y I P +EHYGC++
Sbjct: 335 ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMI 394
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG 439
D+L RAG L++A +I+SMP + N IW SLL++S H +LE+GE A LI+ +P+ +G
Sbjct: 395 DLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSG 454
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKA 499
Y LL+N+Y+ G+WD+ +R MMK GV K AG S +E ++ +FI GD +HPQ +
Sbjct: 455 NYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVER 514
Query: 500 IYAKLREMSKKLK 512
I+ L+EM +++
Sbjct: 515 IHEILQEMDLQIQ 527
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 186/384 (48%), Gaps = 50/384 (13%)
Query: 25 ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVN 84
A+ ++R++ PD FT P V+K R+ V G+QIHG V+ GF V + L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS--RDAFTWT 142
MY G +G ARK+FD+M+ +DV WN+L+ GY + G ++ A L + MP R+ +WT
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 143 ALLDGLAKCGKVEAAREVFDQM------PKKSSV--------------------SW---- 172
++ G AK G+ A EVF +M P + ++ S+
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 173 ---------NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
NA+I+ Y KSG I A +F + RN+++W ++I+G +G EA+ +F
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
++K G+ P+ VT ++ LSA S + + G R +S K+ + +I++ +
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 283 CGSIESALAVFKAIANK-KLGHWTAIIVGLGMH---GLADQALELFMEMRRIGMKPHAIT 338
G + A V K++ K W +++ +H L ++AL +++ ++
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLE----PNNSGN 455
Query: 339 FIGVLNACSHKGLVDEGNKCFDMM 362
++ + N S+ G DE +MM
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMM 479
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 25/292 (8%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VSW +IS Y + R+++A+ +F++ML ++ PD TL V+ C+ L +++ G++I Y
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V G + +++++MYAK G + A VF+ + +R+VV+W ++I G A +G+ A
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMIN 177
+ +F+ M + T+ A+L + G V+ + +F+ M K + N MI+
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 178 GYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKE--GLMPS 234
++GK+ A ++ MP + N W S+++ ++ +EL E L E L P+
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH----HDLELGERALSELIKLEPN 451
Query: 235 HVTILSALSAV-SGLAVLGNGRWIHSFMVKHCFDLDGV---LGTSLIEMYSK 282
+ L+ + S L GRW S M+++ GV G S IE+ ++
Sbjct: 452 NSGNYMLLANLYSNL-----GRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 274/499 (54%), Gaps = 13/499 (2%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALL-LFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+P S+N +I + ++A L L+R+M L PD FT V C++L + G
Sbjct: 92 EEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVG 151
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H + K+G D + SL+ MYAK G++G ARK+FD++ +RD VSWNS+I GY+
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEA 211
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSW 172
G + AM LF +M D T ++L + G + R + + K S+
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG 271
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+ +I+ Y K G ++ AR++F QM ++ ++W +MI+ Y NG+ EA +LF + K G+
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P T+ + LSA + L G+ I + + + + T L++MY KCG +E AL V
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F+A+ K W A+I G A +AL LF R+ + P ITFIGVL+AC H GLV
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAGLV 448
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+G + F M + + +VP +EHY ++D+L RAG L +A +E P +P++++ ++L
Sbjct: 449 HQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG 508
Query: 413 SSRNHGNLEIGEYAAHNLIE-ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+ ++ I E A L+E + G Y + SN+ A WD+ + +R +M++RGV+K
Sbjct: 509 ACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVK 568
Query: 472 DAGCSIVEHRGKLNRFIVG 490
GCS +E G+L F+ G
Sbjct: 569 TPGCSWIEIEGELMEFLAG 587
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV-EVAMKLFDEMP----SR 136
L+ + G+ + +F + + S+N +I G N E A+ L+ M
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPK---KSSVSWN-AMINGYMKSGKINLARQLF 192
D FT+ + AK ++ R V + K + V N ++I Y K G++ AR+LF
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 193 GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
++ R+ +SWNSMISGY G +AM+LF + +EG P T++S L A S L L
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 253 NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
GR + + L LG+ LI MY KCG ++SA VF + K WTA+I
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTV 372
+G + +A +LF EM + G+ P A T VL+AC G ++ G K + +E + +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNI 369
Query: 373 EHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
LVD+ + G +++A + E+MP++ N+ W +++++ + G+
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGH 415
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K V+W +I+ Y N +S++A LF +M + PD TL V+ C + A++ G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQI + ++ + +V + LV+MY K G + A +VF+ M ++ +WN++I YA
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 121 GNVEVAMKLFDEM--PSRDAFTWTALLDGLAKCGKVEAAREVFDQM-------PKKSSVS 171
G+ + A+ LFD M P D T+ +L G V F +M PK
Sbjct: 414 GHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE--H 470
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR 198
+ +I+ ++G ++ A + + PG+
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGK 497
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 286/544 (52%), Gaps = 50/544 (9%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
S+N +I+ Y ALLLF +++ L D +L V + C+ + + EG QI+G
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K D V ++ ++MY K + A +VFD+M RD VSWN++I + +NG +
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 128 KLFDEM-PSR---DAFTW----------------------------------TALLDGLA 149
LF M SR D FT+ +L+D +
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 150 KCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISG 209
KCG +E A ++ + ++++VS G + ++ + +SWNS+ISG
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 210 YQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLD 269
Y + + +A LF +++ G+ P T + L + LA G G+ IH+ ++K D
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD 637
Query: 270 GVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR 329
+ ++L++MYSKCG + + +F+ + W A+I G HG ++A++LF M
Sbjct: 638 VYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697
Query: 330 IGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQ 389
+KP+ +TFI +L AC+H GL+D+G + F MM +Y + P + HY +VDIL ++G ++
Sbjct: 698 ENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVK 757
Query: 390 QAKNIIESMPMRPNKVIWMSLLSSSRNH-GNLEIGEYAAHNLIEADPDATGCYTLLSNIY 448
+A +I MP + VIW +LL H N+E+ E A L+ DP + YTLLSN+Y
Sbjct: 758 RALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVY 817
Query: 449 AAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMS 508
A AG W+KVS +R M+ + K+ GCS VE + +L+ F+VGDK+HP+ + IY +L +
Sbjct: 818 ADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIY 877
Query: 509 KKLK 512
++K
Sbjct: 878 SEMK 881
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 192/410 (46%), Gaps = 18/410 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+VSWN ++S Y+ N S ++ +F M + DG T ++K CS L G QIHG
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 204
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
V+++G D S+L++MYAK + +VF + +++ VSW+++I G +N + +
Sbjct: 205 IVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 126 AMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMIN 177
A+K F EM +A + ++L A ++ ++ K + A ++
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLD 324
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K + A+ LF N S+N+MI+GY +A+ LF L+ GL ++
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ A + + L G I+ +K LD + + I+MY KC ++ A VF +
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ W AII +G + L LF+ M R ++P TF +L AC+ G+
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG------GSL 498
Query: 358 CFDMMINEYKI---VPTVEHYGC-LVDILCRAGHLQQAKNIIESMPMRPN 403
+ M I+ + + + GC L+D+ + G +++A+ I R N
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 191/411 (46%), Gaps = 41/411 (9%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD 106
V K C++ A++ GKQ H +++ GF FV + L+ +Y + A VFDKM RD
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK 166
VVSWN +I+GY+++ ++ A F+ MP RD +W ++L G + G+ + EVF M +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 167 K---------------------------------------SSVSWNAMINGYMKSGKINL 187
+ V+ +A+++ Y K +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
+ ++F +P +N +SW+++I+G N A++ F+ + K S S L + +
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
L+ L G +H+ +K F DG++ T+ ++MY+KC +++ A +F N + A+
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I G +AL LF + G+ I+ GV AC+ + EG + + + I
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-S 412
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ V +D+ + L +A + + M R + V W +++++ +G
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 163/326 (50%), Gaps = 32/326 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + VSWN II+ + N + + L LF ML + PD FT ++K C+ ++ G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD-------------- 106
+IH ++K G + V SL++MY+K G + A K+ + R
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 107 ------VVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEA 156
VSWNS+I GY E A LF M + D FT+ +LD A
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 157 AREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQL 212
+++ Q+ KK S + +++ Y K G ++ +R +F + R+ ++WN+MI GY
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 213 NGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL 272
+G+ EA++LFE ++ E + P+HVT +S L A + + ++ G + +M+K + LD L
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG-LEYFYMMKRDYGLDPQL 740
Query: 273 G--TSLIEMYSKCGSIESALAVFKAI 296
++++++ K G ++ AL + + +
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREM 766
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 143/266 (53%), Gaps = 20/266 (7%)
Query: 1 MHKPTL----VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHA 56
MH L VSWN IIS YV +S DA +LF +M+ + PD FT V+ C+ L +
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 57 VQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDG 116
GKQIH V+K D ++ S+LV+MY+K G++ +R +F+K + RD V+WN++I G
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 117 YARNGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS- 171
YA +G E A++LF+ M + T+ ++L A G ++ E F M + +
Sbjct: 679 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 738
Query: 172 ----WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLE-AMELFEV 225
++ M++ KSGK+ A +L +MP + + W +++ ++ +E A E
Sbjct: 739 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAA 798
Query: 226 LLKEGLMP---SHVTILSALSAVSGL 248
LL+ L P S T+LS + A +G+
Sbjct: 799 LLR--LDPQDSSAYTLLSNVYADAGM 822
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 288/526 (54%), Gaps = 11/526 (2%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
K VSW +IS Y S AL F +M+ + P+ TL V+ C + ++EGK
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 63 IHGYVLKIGFGFD-KFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+HG+ ++ + + + +LV +YA+ G++ V + DR++V+WNSLI YA G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK---KSSVSWNA 174
V A+ LF +M ++ DAFT + + G V +++ + + N+
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS 444
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+I+ Y KSG ++ A +F Q+ R++++WNSM+ G+ NG +EA+ LF+ + L +
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
VT L+ + A S + L G+W+H ++ D T+LI+MY+KCG + +A VF+
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
A++++ + W+++I GMHG A+ F +M G KP+ + F+ VL+AC H G V+E
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSS 414
G F++M + + P EH+ C +D+L R+G L++A I+ MP + +W SL++
Sbjct: 624 GKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 415 RNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
R H ++I + ++L + D TG YTLLSNIYA G+W++ +R MK + K G
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPG 742
Query: 475 CSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDT 520
S +E K+ RF G+++ QT IY L + + L HV D+
Sbjct: 743 YSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL-QNLTNEEHVVDS 787
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 239/474 (50%), Gaps = 33/474 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGC--SRLHAVQEGK 61
P + ++I C V H + A+ L+ +++ F P V++ C SR H + G
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREH-LSVGG 121
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
++HG ++K G D +++SL+ MY + G + A KVFD M RD+V+W++L+ NG
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 122 NVEVAMKLF----DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
V A+++F D+ DA T ++++G A+ G + AR V Q+ +K N
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLE-AMELFEVLLKEGLM 232
+++ Y K G + + ++F ++ +N +SW +MIS Y G F E A+ F ++K G+
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIE 300
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLD-GVLGTSLIEMYSKCGSIESALA 291
P+ VT+ S LS+ + ++ G+ +H F V+ D + L +L+E+Y++CG +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
V + ++++ + W ++I G+ QAL LF +M +KP A T ++AC + GL
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V G + +I V++ L+D+ ++G + A + + R + V W S+L
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSML 477
Query: 412 SSSRNHGN----LEIGEYAAHNLIEADPDATGCYTLLSNIYAAA-------GKW 454
+GN + + +Y H+ +E + T L+ I A + GKW
Sbjct: 478 CGFSQNGNSVEAISLFDYMYHSYLEMNE-----VTFLAVIQACSSIGSLEKGKW 526
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 236/465 (50%), Gaps = 50/465 (10%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LV+W+ ++S + N AL +F+ M+ + PD T+ V++GC+ L ++ + +HG
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+ + F D+ + +SL+ MY+K G++ + ++F+K+ ++ VSW ++I Y R E
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 126 AMKLFDEM-PSRDAFTWTALLDGLAKCGKVEAARE--------VFDQM-PKKSSVSWNAM 175
A++ F EM S L L+ CG + RE V ++ P S+S A+
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-AL 345
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
+ Y + GK++ + + RN+++WNS+IS Y G ++A+ LF ++ + + P
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T+ S++SA ++ G+ IH +++ D + SLI+MYSK GS++SA VF
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
I ++ + W +++ G +G + +A+ LF M ++ + +TF+ V+ ACS G +++G
Sbjct: 465 IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Query: 356 NKC-FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP--------------- 399
++I+ K + T L+D+ + G L A+ + +M
Sbjct: 525 KWVHHKLIISGLKDLFTDT---ALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 400 -------------------MRPNKVIWMSLLSSSRNHGNLEIGEY 425
+PN+V++M++LS+ + G++E G+Y
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY 626
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 25/418 (5%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR 105
+ + CS L V Q+H ++L G D + L+ YA G +R VF+
Sbjct: 7 LFRSCSSLRLVS---QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 106 DVVSWNSLIDG----YARNGNVEVAMKLFDEMPSRDAFTWTALL-------DGLAKCGKV 154
D + LI + + +++ +L E F + ++L + L+ GKV
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 155 EAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
+ +V +++ Y ++G ++ A ++F MP R+L++W++++S NG
Sbjct: 124 HG--RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
++A+ +F+ ++ +G+ P VT++S + + L L R +H + + FDLD L
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
SL+ MYSKCG + S+ +F+ IA K WTA+I +++AL F EM + G++P
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG-CLVDILCRAGHLQQAKN 393
+ +T VL++C GL+ EG + ++ P E LV++ G L +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCET 360
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNL--EIGEYAAHNLIEADPDATGCYTLLSNIYA 449
++ + R N V W SL+S + G + +G + PDA +TL S+I A
Sbjct: 361 VLRVVSDR-NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA---FTLASSISA 414
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 252/451 (55%), Gaps = 31/451 (6%)
Query: 11 LIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKI 70
++I N ++L FR+M L D F +P ++K L + GK IH VLK
Sbjct: 87 VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 71 GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLF 130
+ D F+ SSL++MY+K+GE+G ARKVF + ++D+V +N++I GYA N + A+ L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 131 DEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKIN 186
+M D TW AL+ G + E E+ + M ++GY
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM----------CLDGYKP----- 251
Query: 187 LARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
+++SW S+ISG N + +A + F+ +L GL P+ TI++ L A +
Sbjct: 252 ------------DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 247 GLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTA 306
LA + +G+ IH + V + G + ++L++MY KCG I A+ +F+ K + +
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
+I HGLAD+A+ELF +M G K +TF +L ACSH GL D G F +M N+Y
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYA 426
+IVP +EHY C+VD+L RAG L +A +I++M M P+ +W +LL++ RNHGN+E+ A
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 427 AHNLIEADPDATGCYTLLSNIYAAAGKWDKV 457
A +L E +P+ +G LL+++YA AG W+ V
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 126/237 (53%), Gaps = 14/237 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+KP +VSW IIS VHN ++ A F+QML H L P+ T+ ++ C+ L ++ GK
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+IHGY + G FV+S+L++MY K G + A +F K + V++NS+I YA +G
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV-----SW 172
+ A++LFD+M + D T+TA+L + G + + +F M K + +
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY 428
Query: 173 NAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
M++ ++GK+ A ++ M +L W ++++ + +G MEL + K
Sbjct: 429 ACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN----MELARIAAK 481
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 283/518 (54%), Gaps = 15/518 (2%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQML-HHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
WN +I YV N +++ LF + + +++ D T S L V+ G+Q HG+V
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K + +SL+ MY++ G + + VF M +RDVVSWN++I + +NG + +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 128 KLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAM----INGY 179
L EM + D T TALL + E ++ + ++ + + M I+ Y
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMY 463
Query: 180 MKSGKINLARQLF--GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
KSG I ++++LF R+ +WNSMISGY NG + +F +L++ + P+ VT
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ S L A S + + G+ +H F ++ D + + ++L++MYSK G+I+ A +F
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ +T +I+G G HG+ ++A+ LF+ M+ G+KP AITF+ VL+ACS+ GL+DEG K
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV-IWMSLLSSSRN 416
F+ M Y I P+ EHY C+ D+L R G + +A ++ + N +W SLL S +
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 417 HGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAG 474
HG LE+ E + L + D + +G LLSN+YA KW V VR M+E+G+ K+ G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 475 CSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
S +E G +N F+ D+ HP + IY + ++K ++
Sbjct: 764 RSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 251/510 (49%), Gaps = 34/510 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+WN +IS YV R+ +A F M+ ++ P + V S ++++
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 61 KQIHGYVLKIGFGF--DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
+G +LK+G + D FV SS ++MYA+ G++ +R+VFD V+R++ WN++I Y
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 119 RNGNVEVAMKLFDEMPS-----RDAFTWTALLDGLAKCGKVEAAREV-------FDQMPK 166
+N + +++LF E D T+ ++ +VE R+ F ++P
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP- 352
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
V N+++ Y + G ++ + +F M R+++SWN+MIS + NG E + L +
Sbjct: 353 --IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM 410
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
K+G ++T+ + LSA S L G+ H+F+++ +G + + LI+MYSK G I
Sbjct: 411 QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLI 469
Query: 287 ESALAVFK--AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
+ +F+ A + W ++I G +G ++ +F +M ++P+A+T +L
Sbjct: 470 RISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILP 529
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
ACS G VD G + I +Y + V LVD+ +AG ++ A+++ R N
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER-NS 587
Query: 405 VIWMSLLSSSRNHGNLEIGEYAAHNLIEAD-----PDATGCYTLLSNIYAAAGKWDKVSH 459
V + +++ HG +GE A + PDA +LS + +G D+
Sbjct: 588 VTYTTMILGYGQHG---MGERAISLFLSMQESGIKPDAITFVAVLSAC-SYSGLIDEGLK 643
Query: 460 VREMMKERGVLKDAG---CSIVEHRGKLNR 486
+ E M+E ++ + C I + G++ R
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 226/466 (48%), Gaps = 28/466 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP--DGFTLPCVIKGCSRLHAVQEG 60
KPT V WN II ++ N+ ++ALL + +M D +T +K C+ ++ G
Sbjct: 67 KPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAG 126
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAK------WGEMGLARKVFDKMVDRDVVSWNSLI 114
K +H ++++ + V +SL+NMY E + RKVFD M ++VV+WN+LI
Sbjct: 127 KAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLI 186
Query: 115 DGYARNGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK-- 166
Y + G A + F M PS +F + ++ ++ A + M K
Sbjct: 187 SWYVKTGRNAEACRQFGIMMRMEVKPSPVSF--VNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 167 ----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMEL 222
K ++ I+ Y + G I +R++F RN+ WN+MI Y N +E++EL
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 223 F-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
F E + + ++ VT L A SAVS L + GR H F+ K+ +L V+ SL+ MYS
Sbjct: 305 FLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS 364
Query: 282 KCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+CGS+ + VF ++ + + W +I +GL D+ L L EM++ G K IT
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE-SMPM 400
+L+A S+ + G + +I + + Y L+D+ ++G ++ ++ + E S
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYA 482
Query: 401 RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLL 444
++ W S++S +G+ E ++E + P+A ++L
Sbjct: 483 ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 123/232 (53%), Gaps = 11/232 (4%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
+WN +IS Y N + L+FR+ML ++ P+ T+ ++ CS++ +V GKQ+HG+
Sbjct: 488 TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFS 547
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
++ + FV S+LV+MY+K G + A +F + +R+ V++ ++I GY ++G E A+
Sbjct: 548 IRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAI 607
Query: 128 KLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP-----KKSSVSWNAMING 178
LF M DA T+ A+L + G ++ ++F++M + SS + + +
Sbjct: 608 SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 179 YMKSGKINLARQLFGQMPGRNLIS--WNSMISGYQLNGRFLEAMELFEVLLK 228
+ G++N A + + I+ W S++ +L+G A + E L K
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAK 719
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 165/350 (47%), Gaps = 25/350 (7%)
Query: 90 GEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR------DAFTWTA 143
G LAR++FD + V WN++I G+ N A+ + M DA+T+++
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 144 LLDGLAKCGKVEAAREV----FDQMPKKSSVSWNAMINGYMKS------GKINLARQLFG 193
L A+ ++A + V + S V N+++N Y+ + ++ R++F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 194 QMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
M +N+++WN++IS Y GR EA F ++++ + PS V+ ++ AVS +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 254 GRWIHSFMVK--HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGL 311
+ M+K + D + +S I MY++ G IES+ VF + + + W +I
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 312 GMHGLADQALELFMEMRRIGMK---PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKI 368
+ +++ELF+E IG K +T++ +A S V+ G + + ++
Sbjct: 293 VQNDCLVESIELFLEA--IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE 350
Query: 369 VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+P V L+ + R G + ++ + SM R + V W +++S+ +G
Sbjct: 351 LPIV-IVNSLMVMYSRCGSVHKSFGVFLSMRER-DVVSWNTMISAFVQNG 398
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 14/242 (5%)
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS--HVTI 238
+ G LARQLF +P + WN++I G+ N EA+ + + K + T
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA------V 292
S L A + L G+ +H +++ + V+ SL+ MY C + V
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F + K + W +I G +A F M R+ +KP ++F+ V A S +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 353 DEGNKCFDMMI---NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
+ N + +M+ +EY V + + + G ++ ++ + +S R N +W +
Sbjct: 231 KKANVFYGLMLKLGDEY--VKDLFVVSSAISMYAELGDIESSRRVFDSCVER-NIEVWNT 287
Query: 410 LL 411
++
Sbjct: 288 MI 289
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 293/543 (53%), Gaps = 74/543 (13%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + + VS+ +I Y N++ ++A+ LFR+M + ++ + TL VI CS L + +
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMY-------------------------------AKW 89
+ + +K+ FV ++L++MY +K
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 90 GEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM------PSR----DAF 139
G + A ++FD++ ++D+VSW ++IDG R ++ A+ + EM PS D
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 140 TWTALLDGLAK-----------------------------CGKVEAAREVFDQMPKKSSV 170
+ +A G +K ++ A + F+ K
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF-EVLLKE 229
S NA+I G++K+G + AR++F Q +++ SWN+MISGY + A+ LF E++
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+ P +T++S SA+S L L G+ H ++ + L ++I+MY+KCGSIE+A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 290 LAVF---KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
L +F K I++ + W AII G HG A AL+L+ +++ + +KP++ITF+GVL+AC
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
H GLV+ G F+ M +++ I P ++HYGC+VD+L +AG L++AK +I+ MP++ + +I
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
W LLS+SR HGN+EI E AA L DP GC +LSN+YA AG+W+ V+ VRE M+
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRT 672
Query: 467 RGV 469
R V
Sbjct: 673 RDV 675
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 229/573 (39%), Gaps = 151/573 (26%)
Query: 44 LPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV 103
L + C+ + V G+QIH VLK G + ++ +S++NMYAK + A VF
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 104 DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ 163
D S+N ++DGY R+ + A+KLFD MP R ++T L+ G A+ + A E+F +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 164 MPK----KSSVSWNAMINGYMKSGKI-----------------------NL--------- 187
M + V+ +I+ G I NL
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 188 ---ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV------------------- 225
AR+LF +MP RNL++WN M++GY G +A ELF+
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 226 ------------LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
+L+ G+ PS V ++ LSA + G +H +VK FD L
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 274 TSLIEMYS-------------------------------KCGSIESALAVFKAIANKKLG 302
++I Y+ K G +E A VF +K +
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 303 HWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
W A+I G AL LF EM +KP AIT + V +A S G ++EG + D
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI--------------------------- 394
+ N I P ++D+ + G ++ A NI
Sbjct: 464 L-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 395 ----------IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNL-----IEADPDATG 439
++S+P++PN + ++ +LS+ + G +E+G+ ++ IE D G
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
C L GK ++ +EM+K+ V D
Sbjct: 583 CMVDL------LGKAGRLEEAKEMIKKMPVKAD 609
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 316/654 (48%), Gaps = 57/654 (8%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGKQIH 64
+ SWN ++S V +S+ A LF +M + D FTL ++ C+ + G+++H
Sbjct: 249 VASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH 308
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G ++IG + V ++L+ Y+K+ +M +++ M+ +D V++ +I Y G V+
Sbjct: 309 GRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVD 368
Query: 125 VAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM-------------------- 164
A+++F + ++ T+ AL+ G + G A ++F M
Sbjct: 369 SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG 428
Query: 165 ---PKKSS-------VSWNAMINGYMKSGKINL---------ARQLFGQMPGRNLIS--- 202
KK S + + N +++ +++ A ++F Q P NL S
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKA 487
Query: 203 WNSMISGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
S+I GY NG +A+ LF L ++ L V++ L+ L G IH +
Sbjct: 488 TTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
+K + D LG SLI MY+KC + A+ +F + + W ++I + D+AL
Sbjct: 548 LKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEAL 607
Query: 322 ELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK---CFDMMINE---YKIVPTVEHY 375
L+ M +KP IT V++A + E NK C D+ ++ Y I PT EHY
Sbjct: 608 ALWSRMNEKEIKPDIITLTLVISAFRYT----ESNKLSSCRDLFLSMKTIYDIEPTTEHY 663
Query: 376 GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
V +L G L++A++ I SMP++P + +LL S R H N + + A ++ P
Sbjct: 664 TAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKP 723
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
+ Y L SNIY+A+G W + +RE M+ERG K S + H K++ F D SHP
Sbjct: 724 ETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHP 783
Query: 496 QTKAIYAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMER 555
Q K IY L + + G+ P+T VL +LA+++G+L+
Sbjct: 784 QEKDIYRGLEILIMECLKVGYEPNTEYVL-QEVDEFMKKSFLFHHSAKLAVTYGILSSNT 842
Query: 556 R-TPIRIMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
R P+R+MKN+ +C DCH K +S + REI++RD+S FHHF NG CSC D W
Sbjct: 843 RGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 232/525 (44%), Gaps = 62/525 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQE 59
+ PT+VS+ +IS + + +AL +F +M L+ P+ +T ++ C R+
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAK--WGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
G QIHG ++K GF FV +SL+++Y K K+FD++ RDV SWN+++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 118 ARNGNVEVAMKLFDEMP-----SRDAFTWTALLDGLAKCGKVEAARE------------- 159
+ G A LF EM D+FT + LL + RE
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 160 ----------------------VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPG 197
+++ M + +V++ MI YM G ++ A ++F +
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWI 257
+N I++N++++G+ NG L+A++LF +L+ G+ + ++ SA+ A ++ I
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 258 HSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK--KLGHWTAIIVGLGMHG 315
H F +K + + T+L++M ++C + A +F + T+II G +G
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNG 499
Query: 316 LADQALELFMEM---RRIGMKPHAITFIGVLNACSHKGLVDEGNK--CFDMMINEYKIVP 370
L D+A+ LF +++ + ++T I L C G + G + C+ + +
Sbjct: 500 LPDKAVSLFHRTLCEQKLFLDEVSLTLI--LAVCGTLGFREMGYQIHCYALKAGYFS--- 554
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI-WMSLLSSS--RNHGNLEIGEYAA 427
+ L+ + + A I + MR + VI W SL+S + +G+ + ++
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 428 HNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
N E PD ++S +K+S R++ + D
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTES--NKLSSCRDLFLSMKTIYD 655
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 194/439 (44%), Gaps = 67/439 (15%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVF 99
DGF +++ ++ H V+ K +H LK+ + + ++L++ Y K G A VF
Sbjct: 81 DGFFY--LLRLSAQYHDVEVTKAVHASFLKLREEKTR-LGNALISTYLKLGFPREAILVF 137
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEV-AMKLFDEMP-----SRDAFTWTALLDGLAKCGK 153
+ VVS+ +LI G++R N+E+ A+K+F M + +T+ A+L + +
Sbjct: 138 VSLSSPTVVSYTALISGFSR-LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSR 196
Query: 154 VEAAREVFDQMPKK----SSVSWNAMINGYMKS--GKINLARQLFGQMPGRNLISWNSMI 207
++ + K S N++++ Y K + +LF ++P R++ SWN+++
Sbjct: 197 FSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVV 256
Query: 208 SGYQLNGRFLEAMELF-EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK--- 263
S G+ +A +LF E+ EG T+ + LS+ + +VL GR +H ++
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGL 316
Query: 264 ---------------HCFDL-------------DGVLGTSLIEMYSKCGSIESALAVFKA 295
+D+ D V T +I Y G ++SA+ +F
Sbjct: 317 MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFAN 376
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ K + A++ G +G +AL+LF +M + G++ + ++AC GLV E
Sbjct: 377 VTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE- 432
Query: 356 NKCFDMMINEYKIVPTVEHYGC----LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
K I+ + I C L+D+ R + A+ + + W S L
Sbjct: 433 -KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ---------WPSNL 482
Query: 412 SSSRNHGNLEIGEYAAHNL 430
SS+ ++ IG YA + L
Sbjct: 483 DSSKATTSI-IGGYARNGL 500
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 17/242 (7%)
Query: 130 FDEMPSRDAFTWTALLDGL-------AKCGKVEAAREV---FDQMPKKSSVSWNAMINGY 179
FD+ + D +++DG A+ VE + V F ++ ++ + NA+I+ Y
Sbjct: 68 FDKEETEDI---ESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTY 124
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM-PSHVTI 238
+K G A +F + ++S+ ++ISG+ +EA+++F + K GL+ P+ T
Sbjct: 125 LKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTF 184
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK--CGSIESALAVFKAI 296
++ L+A ++ G IH +VK F + SL+ +Y K S + L +F I
Sbjct: 185 VAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEI 244
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFIGVLNACSHKGLVDEG 355
+ + W ++ L G + +A +LF EM R+ G + T +L++C+ ++ G
Sbjct: 245 PQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Query: 356 NK 357
+
Sbjct: 305 RE 306
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 281/482 (58%), Gaps = 11/482 (2%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ SW II+ + ++ +F +M + + PDG + C+I ++ V +GK HG
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYARNGNVE 124
+V++ F D V +SL++MY K+ + +A K+F ++ + + +WN+++ GY +
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS---SVSW-NAMI 176
++LF ++ + D+ + T+++ + G V + + + K S ++S N++I
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLI 475
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y K G + +A ++F + N+I+WN+MI+ Y + +A+ LF+ ++ E PS +
Sbjct: 476 DLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T+++ L A L G+ IH ++ + +++ L +LI+MY+KCG +E + +F A
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG 594
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
K W +I G GMHG + A+ LF +M +KP TF+ +L+AC+H GLV++G
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
K F + +++Y + P ++HY CLVD+L R+G+L++A++ + SMP P+ VIW +LLSS
Sbjct: 655 KLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
HG E+G A + +DP G Y +L+N+Y+AAGKW++ REMM+E GV K AG S
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Query: 477 IV 478
+V
Sbjct: 774 VV 775
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 27/457 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM--LHHDL-LPDGFTLPCVIKGCSRLHAV 57
M +V+W IIS +V N S L +M D+ P+ TL C + CS L A+
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 58 QEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
+EG+ +HG+ +K G KFVQSS+ + Y+K G A F ++ D D+ SW S+I
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASL 306
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAARE----VFDQMPKKSS 169
AR+G++E + +F EM ++ D + L++ L K V + V S
Sbjct: 307 ARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
N++++ Y K +++A +LF ++ N +WN+M+ GY ++ +ELF +
Sbjct: 367 TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQN 426
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
G+ + S +S+ S + + G+ +H ++VK DL + SLI++Y K G +
Sbjct: 427 LGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV 486
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
A +F A+ + W A+I +++A+ LF M KP +IT + +L AC +
Sbjct: 487 AWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVN 545
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEH------YGCLVDILCRAGHLQQAKNIIESMPMRP 402
G ++ G MI+ Y + EH L+D+ + GHL++++ + ++ +
Sbjct: 546 TGSLERGQ-----MIHRY--ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK- 597
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG 439
+ V W ++S HG++E + E+D TG
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 235/518 (45%), Gaps = 60/518 (11%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN II + N +L F ML PD FT P V+ C+ L G +HG VL
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 69 KIGFGFDK--FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
K G GFD+ V +S V Y+K G + A VFD+M DRDVV+W ++I G+ +NG E
Sbjct: 153 KHG-GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAARE-------VFDQMPKKSSVSWNAM 175
+ +M S D L G C + A +E S ++M
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
+ Y KSG + A F ++ ++ SW S+I+ +G E+ ++F + +G+ P
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
V I ++ + + ++ G+ H F+++HCF LD + SL+ MY K + A +F
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 296 IA---NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
I+ NK+ W ++ G G + +ELF +++ +G++ + + V+++CSH G V
Sbjct: 392 ISEEGNKEA--WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 353 DEGNK--CF------DMMINEYKIVPTVEHYGCLVDI------LCRAG------------ 386
G C+ D+ I+ + ++ YG + D+ C A
Sbjct: 450 LLGKSLHCYVVKTSLDLTIS--VVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIAS 507
Query: 387 --HLQQAKNIIE------SMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDAT 438
H +Q++ I S +P+ + ++LL + N G+LE G+ + E + +
Sbjct: 508 YVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN 567
Query: 439 -GCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
L ++YA G +K RE+ + G KDA C
Sbjct: 568 LSLSAALIDMYAKCGHLEK---SRELF-DAGNQKDAVC 601
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 15/374 (4%)
Query: 51 CSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW 110
C + +++ ++ + ++ G + FV S L++ YA +G+ L+ +VF + RD+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 111 NSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK 166
NS+I + NG+ ++ F M S D FT ++ A+ V + K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 167 KSSVSWNAMING-----YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAME 221
N + Y K G + A +F +MP R++++W ++ISG+ NG +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 222 LFEVLLKEGL---MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIE 278
+ G P+ T+ A S L L GR +H F VK+ + +S+
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 279 MYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
YSK G+ A F+ + ++ + WT+II L G +++ ++F EM+ GM P +
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 339 FIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
++N LV +G +I + + TV L+ + C+ L A+ +
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLFCR 391
Query: 398 MPMRPNKVIWMSLL 411
+ NK W ++L
Sbjct: 392 ISEEGNKEAWNTML 405
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 276/520 (53%), Gaps = 13/520 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +WN ++S + + ++ A LFR+M +++ PD T+ +I+ S +++
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV--DRDVVSWNSLIDGYA 118
+ +H +++G V ++ ++ Y K G++ A+ VF+ + DR VVSWNS+ Y+
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 119 RNGNVEVAMKLFDEMPSRDAFT--WTALLDGLAKCGKVEAARE-------VFDQMPKKSS 169
G A L+ M R+ F + ++ A C E + +
Sbjct: 233 VFGEAFDAFGLYCLML-REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI 291
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ N I+ Y KS AR LF M R +SW MISGY G EA+ LF ++K
Sbjct: 292 EAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKS 351
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL-GTSLIEMYSKCGSIES 288
G P VT+LS +S L G+WI + + D V+ +LI+MYSKCGSI
Sbjct: 352 GEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHE 411
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
A +F K + WT +I G ++G+ +AL+LF +M + KP+ ITF+ VL AC+H
Sbjct: 412 ARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH 471
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
G +++G + F +M Y I P ++HY C+VD+L R G L++A +I +M +P+ IW
Sbjct: 472 SGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWG 531
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
+LL++ + H N++I E AA +L +P Y ++NIYAAAG WD + +R +MK+R
Sbjct: 532 ALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRN 591
Query: 469 VLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMS 508
+ K G S+++ GK + F VG+ H + + IY L +S
Sbjct: 592 IKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 207/426 (48%), Gaps = 33/426 (7%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
+WNL I V+ + ++LLLFR+M P+ FT P V K C+RL V + +H ++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K F D FV ++ V+M+ K + A KVF++M +RD +WN+++ G+ ++G+ + A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 128 KLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK---------KSSVSWNAMING 178
LF EM + + + L + E + ++ + M + +V+ N I+
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA-NTWIST 197
Query: 179 YMKSGKINLARQLFGQMP--GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
Y K G ++ A+ +F + R ++SWNSM Y + G +A L+ ++L+E P
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T ++ ++ L GR IHS + D D + I MYSK SA +F +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
++ WT +I G G D+AL LF M + G KP +T + +++ C G ++ G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 357 KCFDMMINEYKIVPTVEHYGC----------LVDILCRAGHLQQAKNIIESMPMRPNKVI 406
I + YGC L+D+ + G + +A++I ++ P + V
Sbjct: 378 ----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVT 426
Query: 407 WMSLLS 412
W ++++
Sbjct: 427 WTTMIA 432
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 295/530 (55%), Gaps = 12/530 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +V+W +I+ Y ++ + A F +M+ P+ FTL V+K C + + G
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWG-EMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+HG V+K+G +V ++++NMYA M A +F + ++ V+W +LI G+
Sbjct: 131 ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 120 NGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
G+ +K++ +M +A + T + A V +++ + K+ S
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N++++ Y + G ++ A+ F +M ++LI+WN++IS + + EA+ +F+ +G
Sbjct: 251 MNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS-EALLMFQRFESQGF 309
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+P+ T S ++A + +A L G+ +H + + F+ + L +LI+MY+KCG+I +
Sbjct: 310 VPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQR 369
Query: 292 VFKAIANKK-LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF I +++ L WT++++G G HG +A+ELF +M G++P I F+ VL+AC H G
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAG 429
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LV++G K F++M +EY I P + Y C+VD+L RAG + +A ++E MP +P++ W ++
Sbjct: 430 LVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Query: 411 LSSSRNHG-NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
L + + H N I AA ++E P G Y +LS IYAA GKW + VR+MM+ G
Sbjct: 490 LGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGN 549
Query: 470 LKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
K+AG S + ++ F V DK P ++Y+ L + ++ + AG+VP+
Sbjct: 550 KKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPE 599
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 165/348 (47%), Gaps = 11/348 (3%)
Query: 80 SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM----PS 135
++L+ Y + G + AR +FD+M DRDVV+W ++I GYA + A + F EM S
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 136 RDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMK-SGKINLARQ 190
+ FT +++L + V + K S NAM+N Y S + A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 191 LFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
+F + +N ++W ++I+G+ G + +++++ +L E + I A+ A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG 310
+ G+ IH+ ++K F + + S++++Y +CG + A F + +K L W +I
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
L + +AL +F G P+ TF ++ AC++ ++ G + +
Sbjct: 289 LERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNK 346
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
VE L+D+ + G++ ++ + + R N V W S++ +HG
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 9/290 (3%)
Query: 165 PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFE 224
PKK + +I Y + G + AR LF +MP R++++W +MI+GY + A E F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
++K+G P+ T+ S L + + VL G +H +VK + + +++ MY+ C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 285 -SIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM--RRIGMKPHAITFIG 341
++E+A +F+ I K WT +I G G L+++ +M + P+ IT
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI-- 218
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
+ A + V G + +I + ++D+ CR G+L +AK+ M +
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 402 PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA 451
+ + W +L+S + E E+ CYT S + A A
Sbjct: 278 -DLITWNTLISELERSDSSE--ALLMFQRFESQGFVPNCYTFTSLVAACA 324
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 229/371 (61%), Gaps = 5/371 (1%)
Query: 142 TALLDGLAK-CGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
TALL A + AR++FD+M +++ VSW AM++GY +SG I+ A LF MP R++
Sbjct: 165 TALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
SWN++++ NG FLEA+ LF ++ E + P+ VT++ LSA + L + IH+
Sbjct: 225 PSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
F + D + SL+++Y KCG++E A +VFK + K L W ++I +HG +++
Sbjct: 285 FAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEE 344
Query: 320 ALELFMEMRRIGM---KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
A+ +F EM ++ + KP ITFIG+LNAC+H GLV +G FD+M N + I P +EHYG
Sbjct: 345 AIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG 404
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD 436
CL+D+L RAG +A ++ +M M+ ++ IW SLL++ + HG+L++ E A NL+ +P+
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPN 464
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQ 496
G +++N+Y G W++ R+M+K + K G S +E ++++F DKSHP+
Sbjct: 465 NGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPE 524
Query: 497 TKAIYAKLREM 507
T+ IY L +
Sbjct: 525 TEEIYMILDSL 535
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 78/377 (20%)
Query: 22 SNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQS 80
++ A FR M++ + P+ F P V+K L + +H ++ K GF VQ+
Sbjct: 106 ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQT 165
Query: 81 SLVNMYAKW-GEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAF 139
+L++ YA + LAR++FD+M +R+VVSW +++ GYAR+G++ A+ LF++MP RD
Sbjct: 166 ALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP 225
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---------------------------- 171
+W A+L + G A +F +M + S+
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
Query: 172 ------------WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
N++++ Y K G + A +F ++L +WNSMI+ + L+GR EA
Sbjct: 286 AYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Query: 220 MELFEVLLK---EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSL 276
+ +FE ++K + P H+T + L+A + ++ GR FDL
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY--------FDL-------- 389
Query: 277 IEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHA 336
M ++ G IE ++ H+ +I LG G D+ALE+ M+ MK
Sbjct: 390 --MTNRFG-IE-----------PRIEHYGCLIDLLGRAGRFDEALEVMSTMK---MKADE 432
Query: 337 ITFIGVLNACSHKGLVD 353
+ +LNAC G +D
Sbjct: 433 AIWGSLLNACKIHGHLD 449
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%), Gaps = 18/235 (7%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
SWN I++ N +A+ LFR+M++ + P+ T+ CV+ C++ +Q K IH +
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ D FV +SLV++Y K G + A VF + + +WNS+I+ +A +G E A
Sbjct: 286 AYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Query: 127 MKLFDEM-------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNA 174
+ +F+EM D T+ LL+ G V R FD M + + +
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC 405
Query: 175 MINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+I+ ++G+ + A ++ M + + W S+++ +++G ++L EV +K
Sbjct: 406 LIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH----LDLAEVAVK 456
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 298/557 (53%), Gaps = 46/557 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
M LVSWN++I+ Y N A LF ++H D+ PD T+ ++ C++L +
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 60 GKQIHGYVLKIGFGF-DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW----NSLI 114
GK+IH Y+L+ + D V ++L++ YA++G+ A F M +D++SW ++
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 115 DGYARNGNVEVAMKLFDEMPSRDAFTW--------------------------------- 141
D + + + L +E + D+ T
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 142 -----TALLDGLAKCGKVEAAREVFDQMPKKSS-VSWNAMINGYMKSGKINLARQLFGQM 195
ALLD AKCG VE A ++F + ++ + VS+N++++GY+ SG + A+ LF +M
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
+L +W+ M+ Y + EA+ +F + G+ P+ VTI++ L + LA L R
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
H ++++ D L +L+++Y+KCGS++ A +VF++ A + L +TA++ G +HG
Sbjct: 589 QCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY 375
+AL ++ M +KP + +L AC H GL+ +G + +D + + + PT+E Y
Sbjct: 648 RGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY 707
Query: 376 GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
C VD++ R G L A + + MP+ PN IW +LL + + +++G A++L++A+
Sbjct: 708 ACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES 767
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
D TG + L+SN+YAA KW+ V +R +MK++ + K AGCS +E G+ N F+ GD SHP
Sbjct: 768 DDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHP 827
Query: 496 QTKAIYAKLREMSKKLK 512
+ +I+ + + ++K
Sbjct: 828 RRDSIFDLVNALYLQMK 844
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 233/496 (46%), Gaps = 52/496 (10%)
Query: 7 VSWNLI-----ISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQEG 60
V WN++ +SC + + F+ M D P T V+ C RL G
Sbjct: 88 VVWNIVLTGLSVSC------GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEM-GLARKVFDKMVDRDVVSWNSLIDGYAR 119
K +H Y++K G D V ++LV+MYAK+G + A FD + D+DVVSWN++I G++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 120 NGNVEVAMKLFDEM---PSRDAFTWTALLDGLAKCGKVE------AAREVFDQMPKKSSV 170
N + A + F M P+ + + + L C ++ + R++ + ++S +
Sbjct: 202 NNMMADAFRSFCLMLKEPTEP--NYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 171 SW-----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
N++++ Y++ G+I A LF +M ++L+SWN +I+GY N + +A +LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 226 LLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL-DGVLGTSLIEMYSKC 283
L+ +G + P VTI+S L + L L +G+ IHS++++H + L D +G +LI Y++
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 284 GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
G +A F ++ K + W AI+ Q L L + + ++T + +L
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 344 NACSHK---GLVDEGNKCFDMMINEYKIVPTVEHY-------GCLVDILCRAGHLQQAKN 393
C + G V E ++ Y + + H L+D + G+++ A
Sbjct: 440 KFCINVQGIGKVKE--------VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGK 453
I + R V + SLLS N G+ + + + D ++L+ IYA +
Sbjct: 492 IFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTD---LTTWSLMVRIYAESCC 548
Query: 454 WDKVSHVREMMKERGV 469
++ V ++ RG+
Sbjct: 549 PNEAIGVFREIQARGM 564
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 230/491 (46%), Gaps = 54/491 (10%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLH---AVQEGKQ 62
+VSWN II+ + N+ DA F ML P+ T+ V+ C+ + A + G+Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 63 IHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
IH YV++ + FV +SLV+ Y + G + A +F +M +D+VSWN +I GYA N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 122 NVEVAMKLFDEMP-----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SVS 171
A +LF + S D+ T ++L A+ + + +E+ + + S +
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
NA+I+ Y + G + A F M +++ISWN+++ + + + + + L LL E +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF---DLDGVLGTSLIEMYSKCGSIES 288
VTILS L + +G + +H + VK + + LG +L++ Y+KCG++E
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 289 ALAVFKAIANKK-LGHWTAIIVGLGMHGLADQALELFMEM-------------------- 327
A +F ++ ++ L + +++ G G D A LF EM
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC 548
Query: 328 --------RRI---GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
R I GM+P+ +T + +L C+ + +C +I + + G
Sbjct: 549 PNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR--GGLGDIRLKG 606
Query: 377 CLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD-- 434
L+D+ + G L+ A ++ +S R + V++ ++++ HG + ++ E++
Sbjct: 607 TLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK 665
Query: 435 PDATGCYTLLS 445
PD T+L+
Sbjct: 666 PDHVFITTMLT 676
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 167/360 (46%), Gaps = 16/360 (4%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD 106
V+K C+ + + G+ +HG V K+G V S++NMYAK M +K+F +M D
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVF 161
V WN ++ G + + E M+ F M P + T+ +L + G + +
Sbjct: 87 PVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 162 DQMPK----KSSVSWNAMINGYMKSGKI-NLARQLFGQMPGRNLISWNSMISGYQLNGRF 216
+ K K ++ NA+++ Y K G I A F + ++++SWN++I+G+ N
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 217 LEAMELFEVLLKEGLMPSHVTILSALSAVSGL---AVLGNGRWIHSFMVKHCFDLDGV-L 272
+A F ++LKE P++ TI + L + + +GR IHS++V+ + V +
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFV 265
Query: 273 GTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG- 331
SL+ Y + G IE A ++F + +K L W +I G + +A +LF + G
Sbjct: 266 CNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGD 325
Query: 332 MKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQA 391
+ P ++T I +L C+ + G + ++ ++ L+ R G A
Sbjct: 326 VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAA 385
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 275/493 (55%), Gaps = 17/493 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ K +VSW +IS + DALLLF++M D+ + FT V+K C L ++EG
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
QIHG V K + V+S+L+++YA+ G+M AR FD M +RD+VSWN++IDGY N
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 192
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDG--LAKCGKVEAAREVFDQMPK----KSSV 170
+ + LF M + D FT+ +LL + KC +E E+ K +SS
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC--LEIVSELHGLAIKLGFGRSSA 250
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY-QLNGRFLEAMELFEVLLKE 229
+++N Y+K G + A +L R+L+S ++I+G+ Q N +A ++F+ +++
Sbjct: 251 LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM 310
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC-FDLDGVLGTSLIEMYSKCGSIES 288
V + S L + +A + GR IH F +K D LG SLI+MY+K G IE
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIED 370
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
A+ F+ + K + WT++I G G HG ++A++L+ M +KP+ +TF+ +L+ACSH
Sbjct: 371 AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSH 430
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP--MRPNKVI 406
G + G K +D MIN++ I EH C++D+L R+G+L++A +I S + +
Sbjct: 431 TGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSST 490
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
W + L + R HGN+++ + AA L+ +P Y L+++YAA G WD + R++MKE
Sbjct: 491 WGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKE 550
Query: 467 RGVLKDA-GCSIV 478
G A G S+V
Sbjct: 551 SGSCNKAPGYSLV 563
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 279/545 (51%), Gaps = 72/545 (13%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+ N ++ Y+ N + +AL LF+++ + D TL V+K C+ L A++ G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCG 206
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLA------------------------- 95
KQIH +L G D + SSLVN+YAK G++ +A
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 96 ------RKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR------------- 136
R +FD+ +R V+ WNS+I GY N A+ LF+EM +
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVIN 326
Query: 137 -------------------------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS 171
D + LLD +KCG A ++F ++ ++
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N+MI Y G+I+ A+++F ++ ++LISWNSM +G+ NG +E +E F + K L
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
V++ S +SA + ++ L G + + D D V+ +SLI++Y KCG +E
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF + W ++I G +G +A++LF +M G++P ITF+ VL AC++ GL
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL 566
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V+EG K F+ M ++ VP EH+ C+VD+L RAG++++A N++E MP + +W S+L
Sbjct: 567 VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+G +G+ AA +IE +P+ + Y LS I+A +G W+ + VR++M+E V K
Sbjct: 627 RGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTK 686
Query: 472 DAGCS 476
+ G S
Sbjct: 687 NPGSS 691
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 216/491 (43%), Gaps = 121/491 (24%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP--DGFTLPCVIKGCSRLHAVQ 58
M SWN +I Y+++ +L F D++P DG++ V+ G
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPERDGYSWNVVVSG-------- 133
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
+AK GE+ +AR++F+ M ++DVV+ NSL+ GY
Sbjct: 134 ---------------------------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI 166
Query: 119 RNGNVEVAMKLFDEMP-SRDAFTWTALLDG------------------------------ 147
NG E A++LF E+ S DA T T +L
Sbjct: 167 LNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNS 226
Query: 148 -----LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
AKCG + A + +Q+ + S +A+I+GY G++N +R LF + R +I
Sbjct: 227 SLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVIL 286
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
WNSMISGY N +EA+ LF + E S T+ + ++A GL L G+ +H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHAC 345
Query: 263 KHCFDLDGVLGTSLIEMYSKCGS-------------------------------IESALA 291
K D V+ ++L++MYSKCGS I+ A
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF+ I NK L W ++ G +G + LE F +M ++ + ++ V++AC+
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 352 VDEGNKCFD----MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
++ G + F + ++ ++V + L+D+ C+ G ++ + + ++M ++ ++V W
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSS-----SLIDLYCKCGFVEHGRRVFDTM-VKSDEVPW 519
Query: 408 MSLLSSSRNHG 418
S++S +G
Sbjct: 520 NSMISGYATNG 530
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 165/343 (48%), Gaps = 67/343 (19%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR 105
+++ CS + +Q +G +LK GF V + L+ MY++ G+MG+AR +FD+M DR
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 106 DVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP 165
+ SWN++I+GY +G +++ FD MP RD ++W ++ G AK G++ AR +F+ MP
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
+K V+ N++++GY+ LNG EA+ LF+
Sbjct: 152 EKDVVTLNSLLHGYI-------------------------------LNGYAEEALRLFKE 180
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
L +T+ + L A + L L G+ IH+ ++ + D + +SL+ +Y+KCG
Sbjct: 181 L---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 286 IE-----------------SAL--------------AVFKAIANKKLGHWTAIIVGLGMH 314
+ SAL +F +N+ + W ++I G +
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 315 GLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ +AL LF EMR + + T V+NAC G ++ G +
Sbjct: 298 NMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQ 339
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 271/517 (52%), Gaps = 16/517 (3%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCS-RLHA--VQEGKQI 63
VSWN +IS YV + + L L +M L + L V+K C L+ +++G I
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H Y K+G FD V+++L++MYAK G + A K+F M ++VV++N++I G+ + +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 124 -----EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
A KLF +M R T++ +L + +E R++ + K + S
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+A+I Y G Q F +++ SW SMI + N + A +LF L
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P T+ +SA + A L +G I + +K D + TS I MY+K G++ A
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
VF + N + ++A+I L HG A++AL +F M+ G+KP+ F+GVL AC H G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LV +G K F M N+Y+I P +H+ CLVD+L R G L A+N+I S + + V W +L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
LSS R + + IG+ A L+E +P+A+G Y LL NIY +G VRE+M++RGV
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694
Query: 471 KDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREM 507
K+ S + + + F V D SHP ++ IY L M
Sbjct: 695 KEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 28/440 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++S+N +IS Y A+ LF + +L D FT + C + G
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HG V+ G F+ + L++MY+K G++ A +FD+ +RD VSWNSLI GY R
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 121 GNVEVAMKLFDEMPSRDAFTWT--ALLDGLAKC------GKVEAAREVFDQMPKKSS--- 169
G E + L +M RD T AL L C G +E + K
Sbjct: 228 GAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 170 -VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFL-----EAMELF 223
V A+++ Y K+G + A +LF MP +N++++N+MISG+ EA +LF
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
+ + GL PS T L A S L GR IH+ + K+ F D +G++LIE+Y+
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 284 GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
GS E + F + + + + WT++I + + A +LF ++ ++P T ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL----VDILCRAGHLQQAKNIIESMP 399
+AC+ + G + I Y I ++ + + + + ++G++ A + +
Sbjct: 467 SACADFAALSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV- 520
Query: 400 MRPNKVIWMSLLSSSRNHGN 419
P+ + +++SS HG+
Sbjct: 521 QNPDVATYSAMISSLAQHGS 540
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 166/346 (47%), Gaps = 80/346 (23%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK HG+++K ++ ++L+NMY K E+G AR++FD+M +R+++S+NSLI GY +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTA-------------------------------- 143
G E AM+LF E D FT+
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 144 ---LLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQM--PGR 198
L+D +KCGK++ A +FD+ ++ VSWN++I+GY++ G L +M G
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 199 NLISW--NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
NL ++ S++ +N L EG + G
Sbjct: 246 NLTTYALGSVLKACCIN-------------LNEGFIE-------------------KGMA 273
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG-LGMHG 315
IH + K + D V+ T+L++MY+K GS++ A+ +F + +K + + A+I G L M
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 316 LAD----QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
+ D +A +LFM+M+R G++P TF VL ACS ++ G +
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 15/286 (5%)
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMING----YMKSGKINLARQLF 192
D+ + L AK G V + M K S ++N Y K ++ ARQLF
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 193 GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
+MP RN+IS+NS+ISGY G + +AMELF + L T AL L
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 253 NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
G +H +V + L LI+MYSKCG ++ A+++F + W ++I G
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACS---HKGLVDEGNK--CFDMMIN-EY 366
G A++ L L +M R G+ VL AC ++G +++G C+ + E+
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
IV L+D+ + G L++A + MP + N V + +++S
Sbjct: 286 DIVVRT----ALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS 326
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
K + SW +I C+V N + A LFRQ+ + P+ +T+ ++ C+ A+ G+Q
Sbjct: 421 KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQ 480
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
I GY +K G V++S ++MYAK G M LA +VF ++ + DV +++++I A++G+
Sbjct: 481 IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGS 540
Query: 123 VEVAMKLFDEM------PSRDAF 139
A+ +F+ M P++ AF
Sbjct: 541 ANEALNIFESMKTHGIKPNQQAF 563
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/586 (30%), Positives = 287/586 (48%), Gaps = 114/586 (19%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
++W+L+I Y N + AL L+ +ML+ + P +T P V+K C+ L A+ +GK IH +
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V F D +V ++LV+ YAK GE+ +A KVFD+M RD+V+WN++I G++ + +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 127 MKLFDEMP----------------------------------------SRDAFTWTALLD 146
+ LF +M S D T +LD
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 147 GLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQM----------- 195
AK + AR VFD KK+ V+W+AMI GY+++ I A ++F QM
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 196 -----------------PGR-------------NLISWNSMISGYQLNGRFLEAMELF-E 224
GR +L N++IS Y G +A F E
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 225 VLLKE------------------------------GLMPSHVTILSALSAVSGLAVLGNG 254
+ LK+ G+ P T+L L+A S LA LG+G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 255 RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMH 314
H + V H + ++ + +L++MY+KCG ++ A VF + + + W ++ G G+H
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 315 GLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN-EYKIVPTVE 373
GL +AL LF M+ G+ P +T + +L+ACSH GLVDEG + F+ M ++ ++P ++
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
HY C+ D+L RAG+L +A + + MP P+ + +LLS+ + N E+G + + ++
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKM-QS 607
Query: 434 DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVE 479
+ T LLSN Y+AA +W+ + +R + K+RG+LK G S V+
Sbjct: 608 LGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 179 YMKSGKINLARQLFGQMPGR--NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
Y ++ LAR +F ++P N I+W+ MI Y N +A++L+ +L G+ P+
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T L A +GL + +G+ IHS + F D + T+L++ Y+KCG +E A+ VF +
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFIGVLNACSHKGLVDEG 355
+ + W A+I G +H + LF++MRRI G+ P+ T +G+ A G + EG
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 356 NK----CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
C M + +V T ++D+ ++ + A+ + + + + N+V W +++
Sbjct: 225 KAVHGYCTRMGFSNDLVVKT-----GILDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMI 278
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 203/516 (39%), Gaps = 136/516 (26%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDK-FVQSSLVNMYAKWGEMGLARKVFDKMVDR 105
+++ C R + G+ IH ++LK V +L +YA E+ LAR VFD++
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 106 DV--VSWNSLIDGYARNGNVEVAMKLFDEM------PSR--------------------- 136
+ ++W+ +I YA N E A+ L+ +M P++
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 137 ------------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGK 184
D + TAL+D AKCG++E A +VFD+MPK+ V+WNA
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNA---------- 174
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK-EGLMPSHVTILSALS 243
MISG+ L+ + + LF + + +GL P+ TI+
Sbjct: 175 ---------------------MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 244 AVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH 303
A+ L G+ +H + + F D V+ T ++++Y+K I A VF K
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 304 WTAIIVGLGMHGLADQALELFMEM---RRIGM-KPHAITFIGVLNACSHKGLVDEGNKC- 358
W+A+I G + + +A E+F +M + M P AI I L C+ G + G +C
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDL-SGGRCV 330
Query: 359 ----------FDMMINEYKIVPTVEHYGCLVDIL------------------------CR 384
D+ + I+ YG L D CR
Sbjct: 331 HCYAVKAGFILDLTVQN-TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSS----------SRNHGNLEIGEYAAHNLIEAD 434
+ + + + +RP+ + +L++ S HG + YA + I
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI--- 446
Query: 435 PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
C L+ ++Y GK D V + M +R ++
Sbjct: 447 -----CNALM-DMYTKCGKLDVAKRVFDTMHKRDIV 476
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 260/477 (54%), Gaps = 11/477 (2%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N++I+ + + + A+ LF +ML L D F++ ++ S L + GKQ+HGY LK
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLK 478
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKL 129
G D V SSL +Y+K G + + K+F + +D W S+I G+ G + A+ L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 130 FDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMK 181
F EM S D T A+L + + +E+ + K +A++N Y K
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 182 SGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSA 241
G + LARQ++ ++P + +S +S+ISGY +G + LF ++ G I S
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 242 LSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
L A + G +H+++ K + +G+SL+ MYSK GSI+ F I L
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
WTA+I HG A++AL+++ M+ G KP +TF+GVL+ACSH GLV+E +
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
M+ +Y I P HY C+VD L R+G L++A++ I +M ++P+ ++W +LL++ + HG +E
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 422 IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
+G+ AA IE +P G Y LSNI A G+WD+V R++MK GV K+ G S V
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 223/482 (46%), Gaps = 26/482 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++VSW +++S Y ++ + AL +F++M H + + T+ VI C R V E Q+
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD---RDVVSWNSLIDGYARN 120
H +V K GF D V ++L++MY+K G++ L+ +VF+ + D +++V N +I ++++
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQS 431
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV----SW 172
A++LF M D F+ +LL L C + ++V K V
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DC--LNLGKQVHGYTLKSGLVLDLTVG 488
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+++ Y K G + + +LF +P ++ W SMISG+ G EA+ LF +L +G
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P T+ + L+ S L G+ IH + ++ D LG++L+ MYSKCGS++ A V
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
+ + +++I G HGL LF +M G + +L A + L
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA---LS 665
Query: 353 DEGNKCFDMMINEYKIVPTVEHY--GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
DE + + KI E L+ + + G + + P+ + W +L
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTAL 724
Query: 411 LSSSRNHGNLEIGEYAAHNLIEA---DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
++S HG +NL++ PD +LS + H+ M+K+
Sbjct: 725 IASYAQHGKANEA-LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 468 GV 469
G+
Sbjct: 784 GI 785
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 207/430 (48%), Gaps = 21/430 (4%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +VS N++IS Y + ++L F +M + + VI CS L A +
Sbjct: 112 QPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSEL 171
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+ + +K+G+ F + V+S+L+++++K A KVF + +V WN++I G RN N
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 123 VEVAMKLFDEM----PSRDAFTWTALLDGLA-----KCGKVEAAREVFDQMPKKSSVSWN 173
LF EM D++T++++L A + GKV AR + + +
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCT 289
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
A+++ Y K G + A ++F ++P +++SW M+SGY + A+E+F+ + G+
Sbjct: 290 AIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
++ T+ S +SA +++ +H+++ K F LD + +LI MYSK G I+ + VF
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 294 KAIAN-KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA--CSHKG 350
+ + + ++ +I +A+ LF M + G++ + +L+ C + G
Sbjct: 410 EDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
G ++ + + + L + + G L+++ + + +P + N W S+
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDN-ACWASM 522
Query: 411 LSSSRNHGNL 420
+S +G L
Sbjct: 523 ISGFNEYGYL 532
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 157/318 (49%), Gaps = 16/318 (5%)
Query: 52 SRLHAVQEGKQIHGYVLK-IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW 110
SRL ++ K + ++L+ FD F+ SL++ Y+ G M A K+FD + DVVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 111 NSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDG--LAKCGKVEAAREVFDQMPKKS 168
N +I GY ++ E +++ F +M F + G ++ C ++A +F ++
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFL-GFEANEISYGSVISACSALQAP--LFSELVCCH 175
Query: 169 SVSW---------NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
++ +A+I+ + K+ + A ++F N+ WN++I+G N +
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 220 MELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM 279
+LF + P T S L+A + L L G+ + + ++K C D + T+++++
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK-CGAEDVFVCTAIVDL 294
Query: 280 YSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
Y+KCG + A+ VF I N + WT ++ G A ALE+F EMR G++ + T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 340 IGVLNACSHKGLVDEGNK 357
V++AC +V E ++
Sbjct: 355 TSVISACGRPSMVCEASQ 372
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 16/251 (6%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VS + +IS Y + D LLFR M+ D F + ++K + G Q+H Y
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ KIG + V SSL+ MY+K+G + K F ++ D+++W +LI YA++G A
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 127 MKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMIN 177
+++++ M + D T+ +L + G VE + + M K + + M++
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 178 GYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEG--LMPS 234
+SG++ A M + + + W ++++ +++G +EL +V K+ L PS
Sbjct: 798 ALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGE----VELGKVAAKKAIELEPS 853
Query: 235 HVTILSALSAV 245
+LS +
Sbjct: 854 DAGAYISLSNI 864
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 262/487 (53%), Gaps = 13/487 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +P +VSWN +IS +V + S AL +M L+ DGF LPC +K CS + G
Sbjct: 199 MPQPNVVSWNCLISGFV-DKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDK---MVDRDVVSWNSLIDGY 117
KQ+H V+K G F S+L++MY+ G + A VF + V+ V WNS++ G+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 118 ARNGNVEVAMKLFDEMPSRD-AFTWTALLDGLAKCGK-------VEAAREVFDQMPKKSS 169
N E A+ L ++ D F L L C ++ V +
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ + +++ + G I A +LF ++P +++I+++ +I G +G A LF L+K
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
GL + + L S LA LG G+ IH +K ++ + V T+L++MY KCG I++
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
+ +F + + + WT IIVG G +G ++A F +M IG++P+ +TF+G+L+AC H
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
GL++E + M +EY + P +EHY C+VD+L +AG Q+A +I MP+ P+K IW S
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 410 LLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
LL++ H N + A L++ PD YT LSN YA G WD++S VRE K+ G
Sbjct: 618 LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGA 677
Query: 470 LKDAGCS 476
K++G S
Sbjct: 678 -KESGMS 683
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 203/437 (46%), Gaps = 54/437 (12%)
Query: 48 IKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDV 107
++ C ++ A + G+ I +V+K G + F+ +++++MY + + A KVFD+M +R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 108 VSWNSLIDGYARNGNVEVAMKLFDEM-----PSRDAFTWTALL----------------- 145
V+W +++ GY +G A++L+ M + + F ++A+L
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 146 ------------------DGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINL 187
D K G++ A F ++ + SS SWN +I+GY K+G ++
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
A LF +MP N++SWN +ISG+ G A+E + +EGL+ + L A S
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF---KAIANKKLGHW 304
+L G+ +H +VK + ++LI+MYS CGS+ A VF K N + W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN 364
+++ G ++ + AL L +++ + + + T G L C ++ N + ++
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC-----INYVNLRLGLQVH 365
Query: 365 EYKIVPTVE-HY---GCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
+V E Y LVD+ G++Q A + +P + + + + L+ G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFN 424
Query: 421 EIGEYAAHNLIEADPDA 437
+ Y LI+ DA
Sbjct: 425 SLAFYLFRELIKLGLDA 441
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 219/514 (42%), Gaps = 48/514 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQML-HHDLLPDGFTLPCVIKGCSRLHAVQE 59
M + +V+W ++S Y + + N A+ L+R+ML + + F V+K C + +Q
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G ++ + K D + +S+V+MY K G + A F +++ SWN+LI GY +
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGK-------VEAARE--VFD--QMP--- 165
G ++ A+ LF MP + +W L+ G G V RE V D +P
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 166 ------------------------KKSSVSWNAMINGYMKSGKINLARQLFGQMP---GR 198
+ S + +A+I+ Y G + A +F Q
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
++ WNSM+SG+ +N A+ L + + L T+ AL L G +H
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
S +V ++LD ++G+ L+++++ G+I+ A +F + NK + ++ +I G G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE-YKIVPTVEHYGC 377
A LF E+ ++G+ +L CS + G + + I + Y+ P
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT--A 483
Query: 378 LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE--ADP 435
LVD+ + G + + + M R + V W ++ +G +E H +I +P
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLER-DVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 436 DATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
+ LLS + + S + M E G+
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETMKSEYGL 576
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 147 GLAKCGKVEAARE-------VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRN 199
GL CGKV+A + V Q ++ N +I+ Y+ ++ A ++F +M RN
Sbjct: 11 GLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN---GRW 256
+++W +M+SGY +G+ +A+EL+ +L ++ + SA+ GL +G+ G
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL--VGDIQLGIL 128
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
++ + K D VL S+++MY K G + A + FK I W +I G GL
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
D+A+ LF M +P+ +++ C G VD+G+
Sbjct: 189 MDEAVTLFHRMP----QPNVVSW-----NCLISGFVDKGS 219
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 273/512 (53%), Gaps = 10/512 (1%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGKQIH 64
L+SW+ II+ + +AL ++ML + P+ + +K CS L G QIH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
G +K + SL +MYA+ G + AR+VFD++ D SWN +I G A NG +
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMI 176
A+ +F +M S DA + +LL K + ++ + K ++ N+++
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 177 NGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
Y + LF + +SWN++++ + + +E + LF+++L P H
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
+T+ + L ++ L G +H + +K + + LI+MY+KCGS+ A +F +
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ N+ + W+ +IVG G ++AL LF EM+ G++P+ +TF+GVL ACSH GLV+EG
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
K + M E+ I PT EH C+VD+L RAG L +A+ I+ M + P+ V+W +LLS+ +
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK 653
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
GN+ + + AA N+++ DP + + LL +++A++G W+ + +R MK+ V K G
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQ 713
Query: 476 SIVEHRGKLNRFIVGDKSHPQTKAIYAKLREM 507
S +E K++ F D HP+ IY L +
Sbjct: 714 SWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 199/393 (50%), Gaps = 28/393 (7%)
Query: 43 TLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
T +I CS ++ +G++IH ++L +D + + +++MY K G + AR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR 158
+R++VS+ S+I GY++NG A++L+ +M D F + +++ A V +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 159 EVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
++ Q+ K S ++ NA+I Y++ +++ A ++F +P ++LISW+S+I+G+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 215 RFLEAMELFEVLLKEGLM-PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
EA+ + +L G+ P+ S+L A S L G IH +K + + G
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
SL +MY++CG + SA VF I W II GL +G AD+A+ +F +MR G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDI-LCRA------- 385
P AI+ +L A + + +G M I+ Y I +G L D+ +C +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQG-----MQIHSYII-----KWGFLADLTVCNSLLTMYTF 418
Query: 386 -GHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
L N+ E + V W ++L++ H
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 192/454 (42%), Gaps = 78/454 (17%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + LVS+ +I+ Y N + +A+ L+ +ML DL+PD F +IK C+ V G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQ+H V+K+ Q++L+ MY ++ +M A +VF + +D++SW+S+I G+++
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 121 GNVEVAMKLFDEMPS----------------------------------------RDAFT 140
G A+ EM S +A
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
+L D A+CG + +AR VFDQ+ + + SWN +I G +G + A +F QM
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS--- 364
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
G +P +++ S L A + L G IHS+
Sbjct: 365 ----------------------------SGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG-HWTAIIVGLGMHGLADQ 319
++K F D + SL+ MY+ C + +F+ N W I+ H +
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK--CFDMMINEYKIVPTVEHYGC 377
L LF M +P IT +L C + G++ C+ + + + P
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL---KTGLAPEQFIKNG 513
Query: 378 LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
L+D+ + G L QA+ I +SM R + V W +L+
Sbjct: 514 LIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 216 FLEAMELFEVLLKEGLMPSHV-TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
+ EA+E F+ K + T +S + A S L GR IH ++ D +L
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
++ MY KCGS+ A VF + + L +T++I G +G +A+ L+++M + + P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
F ++ AC+ V G + +I + L+ + R + A +
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASRV 225
Query: 395 IESMPMRPNKVIWMSLLS 412
+PM+ + + W S+++
Sbjct: 226 FYGIPMK-DLISWSSIIA 242
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +VSW+ +I Y + +AL+LF++M + P+ T V+ CS + V+EG
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 61 KQIHGYV-LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYA 118
+++ + + G K S +V++ A+ G + A + D+M ++ DVV W +L+
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK 653
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTA 143
GNV +A K + + D F TA
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTA 678
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/508 (32%), Positives = 277/508 (54%), Gaps = 47/508 (9%)
Query: 13 ISCYVHNHRSN----DALLLFRQMLHHDLLPDGFTLPCVIKGCS-RLHAVQEGKQIHGYV 67
+S + NH S AL+L+ + + G+ +P +++ C+ + V GK +H
Sbjct: 14 VSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSES 72
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K G D V SSL++MY K G + ARKVFD+M +R+V +WN++I GY NG+ +A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 128 KLFDEMP-SRDAFTWTALLDGLAKCGKVEAAREVFDQMP--------------------- 165
LF+E+ R+ TW ++ G K ++E ARE+F++MP
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 166 ------------KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN 213
+K++ W+ M++GY + G ++ AR +F ++ R+L+ WN++I+GY N
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
G +A++ F + EG P VT+ S LSA + L GR +HS + +L+ +
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
+LI+MY+KCG +E+A +VF++I+ + + ++I L +HG +ALE+F M + +K
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLK 372
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
P ITFI VL AC H G + EG K F M + + P V+H+GCL+ +L R+G L++A
Sbjct: 373 PDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYT-----LLSNIY 448
+++ M ++PN + +LL + + H + E+ E +IE T Y+ +SN+Y
Sbjct: 432 LVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASISNLY 490
Query: 449 AAAGKWDKVSHVREMMKERGVLKDAGCS 476
A +W +R M++RG+ K G S
Sbjct: 491 AHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 47/262 (17%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
+W++++ YV+N + DA F +P+
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFED------IPEK-------------------------- 206
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+ FV S +++ Y + G++ AR +F ++ RD+V WN+LI GYA+NG + A+
Sbjct: 207 -------NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI 259
Query: 128 KLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGY 179
F M DA T +++L A+ G+++ REV + + + NA+I+ Y
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
K G + A +F + R++ NSMIS ++G+ EA+E+F + L P +T +
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 379
Query: 240 SALSAVSGLAVLGNGRWIHSFM 261
+ L+A L G I S M
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEM 401
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
LV WN +I+ Y N S+DA+ F M PD T+ ++ C++ + G+++H
Sbjct: 239 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+ G ++FV ++L++MYAK G++ A VF+ + R V NS+I A +G +
Sbjct: 299 LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 126 AMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMIN 177
A+++F M S D T+ A+L G + ++F +M K + + +I+
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIH 418
Query: 178 GYMKSGKINLARQLFGQM 195
+SGK+ A +L +M
Sbjct: 419 LLGRSGKLKEAYRLVKEM 436
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 287/525 (54%), Gaps = 13/525 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
+ +P VSWN +I+ +V A L M + + D T ++
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV-DRDVVSWNSLIDGYA 118
KQ+H VLK+G + + +++++ YA G + A++VFD + +D++SWNS+I G++
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 119 RNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SV 170
++ E A +LF +M D +T+T LL + + + + KK +
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 171 SWNAMINGYMK--SGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+ NA+I+ Y++ +G + A LF + ++LISWNS+I+G+ G +A++ F L
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
+ + L + S LA L G+ IH+ K F + + +SLI MYSKCG IES
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 289 ALAVFKAIANK-KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A F+ I++K W A+I+G HGL +L+LF +M +K +TF +L ACS
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
H GL+ EG + ++M YKI P +EHY VD+L RAG + +AK +IESMP+ P+ ++
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL 581
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+ L R G +E+ A++L+E +P+ Y LS++Y+ KW++ + V++MMKER
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKER 641
Query: 468 GVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
GV K G S +E R ++ F D+S+P + IY +++++++++
Sbjct: 642 GVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 210/436 (48%), Gaps = 25/436 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K VSWN +IS Y + DA LF M DG++ ++KG + + G
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+HG V+K G+ + +V SSLV+MYAK + A + F ++ + + VSWN+LI G+ +
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 121 GNVEVAMKLFDEMPSRDAFTWTA--------LLDGLAKCGKVEAAREVFDQMPKKSSVS- 171
+++ A L M + A T A LLD C ++ ++ + ++
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 172 WNAMINGYMKSGKINLARQLFGQMPG-RNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
NAMI+ Y G ++ A+++F + G ++LISWNSMI+G+ + A ELF + +
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK--CGSIES 288
+ T LSA SG G+ +H ++K + +LI MY + G++E
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
AL++F+++ +K L W +II G GL++ A++ F +R +K F +L +CS
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 349 KGLVDEGNKCFDMMI------NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
+ G + + NE+ I + Y + G ++ A+ + + +
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYS-------KCGIIESARKCFQQISSKH 473
Query: 403 NKVIWMSLLSSSRNHG 418
+ V W +++ HG
Sbjct: 474 STVAWNAMILGYAQHG 489
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 208/452 (46%), Gaps = 42/452 (9%)
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H Y +K G D +V + +++ Y K+G +G A +FD+M RD VSWN++I GY G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAM 175
E A LF M D ++++ LL G+A + + +V + K + +++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
++ Y K ++ A + F ++ N +SWN++I+G F++ ++ GLM
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG------FVQVRDIKTAFWLLGLMEMK 196
Query: 236 VTILSALSAVSGLAVLGNG-------RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
+ + L L + + +H+ ++K + + ++I Y+ CGS+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 289 ALAVFKAI-ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A VF + +K L W ++I G H L + A ELF++M+R ++ T+ G+L+ACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 348 HKGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ G M+I + + V + + + I G ++ A ++ ES+ + + +
Sbjct: 317 GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLIS 375
Query: 407 WMSLLSSSRNHG---------------NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA 451
W S+++ G +++ +YA L+ + D L I+A A
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD-LATLQLGQQIHALA 434
Query: 452 GKWDKVSHVREMMKERGVLKDAGCSIVEHRGK 483
K VS+ E + ++ + C I+E K
Sbjct: 435 TKSGFVSN--EFVISSLIVMYSKCGIIESARK 464
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 252/467 (53%), Gaps = 46/467 (9%)
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
A + GK+IH ++K GF D + L+ ++ K G + AR+VFD++ + ++N +I
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 116 GYARNGNVEVAMKLFDEMP----SRDAFTW------------------------------ 141
GY ++G V+ + L M D +T
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 142 ----------TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQL 191
TAL+D K GK+E+AR VF+ M ++ V +MI+GYM G + A ++
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 192 FGQMPGRNLISWNSMISGYQLNGRFLE-AMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
F ++++ +N+M+ G+ +G + +++++ + + G P+ T S + A S L
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG 310
G+ +H+ ++K +G+SL++MY+KCG I A VF + K + WT++I G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
G +G ++ALELF M+ ++P+ +TF+G L+ACSH GLVD+G + F+ M +Y + P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNL 430
+EHY C+VD++ RAG L +A +MP RP+ IW +LLSS HGN+E+ AA L
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 431 IEADPDA-TGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
+ + D G Y LSN+YA+ KWD VS +RE+MK R + K G S
Sbjct: 469 FKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 188/410 (45%), Gaps = 49/410 (11%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIK-----GCSRLH 55
+ KPTL ++N +IS Y+ + + LLL ++M + DG+TL V+K G + +
Sbjct: 95 LPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL 154
Query: 56 AVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLID 115
+ +H ++K D + ++LV+ Y K G++ AR VF+ M D +VV S+I
Sbjct: 155 PRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 116 GYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKV--------------------- 154
GY G VE A ++F+ +D + A+++G ++ G+
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 155 ---------------EAAREVFDQMPKKSSVS----WNAMINGYMKSGKINLARQLFGQM 195
E ++V Q+ K + +++++ Y K G IN AR++F QM
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
+N+ SW SMI GY NG EA+ELF + + + P++VT L ALSA S ++ G
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 256 WIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAIIVGLG 312
I M + + + + ++++ + G + A +A+ + W A++
Sbjct: 395 EIFESMQRD-YSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM 362
+HG + A E+ ++ ++ + N + D +K ++M
Sbjct: 454 LHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVM 503
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 283/536 (52%), Gaps = 51/536 (9%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
+ WN++I Y+ N R +++ ++++M+ + D FT P VIK C+ L G+ +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ + +V ++L++MY ++G++ +AR++FD+M +RD VSWN++I+ Y + A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 127 MKLFDEM----PSRDAFTW--------------------------------TALLDGLAK 150
KL D M TW A+++GL
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 151 CGKVEAAR--EVFDQMPKKS-SVSW------NAMINGYMKSGKINLARQLFGQMPGRNLI 201
C + A + +VF + +S S S N++I Y + + A +F Q+ +L
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
+WNS+ISG+ N R E L + +L G P+H+T+ S L + + L +G+ H ++
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 262 VKHCFDLDG-VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
++ D +L SL++MY+K G I +A VF ++ + +T++I G G G + A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVD 380
L F +M R G+KP +T + VL+ACSH LV EG+ F M + + I +EHY C+VD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 381 ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHN-LIEADPDATG 439
+ CRAG+L +A++I ++P P+ + +LL + HGN IGE+AA L+E P+ G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
Y LL+++YA G W K+ V+ ++ + GV K +++E +L+ G+ + P
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 198/450 (44%), Gaps = 58/450 (12%)
Query: 25 ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVN 84
+LL ++ H +L ++ ++ C + G+Q+H + + G FD + LV
Sbjct: 70 SLLRYQSGSHEFVL---YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVT 126
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFT 140
Y+ + + A+ + + + WN LI Y RN + ++ ++ M S+ D FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQMP 196
+ +++ A R V + S NA+I+ Y + GK+++AR+LF +M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT------------------- 237
R+ +SWN++I+ Y + EA +L + + G+ S VT
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 238 ----------------ILSALSAVSGLAVLGNGRWIHSFMVKHC---FDLDGVLGTSLIE 278
+++ L A S + L G+ H +++ C D+D V SLI
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV-RNSLIT 365
Query: 279 MYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
MYS+C + A VF+ + L W +II G + +++ L EM G P+ IT
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 339 FIGVLNACSHKGLVDEGNK--CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
+L + G + G + C+ + YK + + LVD+ ++G + AK + +
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL--WNSLVDMYAKSGEIIAAKRVFD 483
Query: 397 SMPMRPNKVIWMSLLSSSRNHGNLEIGEYA 426
SM R +KV + SL+ +G L GE A
Sbjct: 484 SMRKR-DKVTYTSLID---GYGRLGKGEVA 509
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 49/344 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFT----------------- 43
M + VSWN II+CY + +A L +M + T
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 44 LPCVI------------------KGCSRLHAVQEGKQIHGYVLK-IGFGFD-KFVQSSLV 83
L CV+ K CS + A++ GK H V++ F D V++SL+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 84 NMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAF 139
MY++ ++ A VF ++ + +WNS+I G+A N E L EM +
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSS-----VSWNAMINGYMKSGKINLARQLFGQ 194
T ++L A+ G ++ +E + ++ S + WN++++ Y KSG+I A+++F
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 195 MPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
M R+ +++ S+I GY G+ A+ F+ + + G+ P HVT+++ LSA S ++ G
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 255 RWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAI 296
W+ + M +H F + L + ++++Y + G ++ A +F I
Sbjct: 545 HWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
+L +WN IIS + +N RS + L ++ML P+ TL ++ +R+ +Q GK+ H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 65 GYVLKIGFGFDKFVQ-SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
Y+L+ D + +SLV+MYAK GE+ A++VFD M RD V++ SLIDGY R G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNA 174
EVA+ F +M D T A+L + V +F +M + ++
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 175 MINGYMKSGKINLARQLFGQMP 196
M++ Y ++G ++ AR +F +P
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 283/536 (52%), Gaps = 51/536 (9%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
+ WN++I Y+ N R +++ ++++M+ + D FT P VIK C+ L G+ +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+ + +V ++L++MY ++G++ +AR++FD+M +RD VSWN++I+ Y + A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 127 MKLFDEM----PSRDAFTW--------------------------------TALLDGLAK 150
KL D M TW A+++GL
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 151 CGKVEAAR--EVFDQMPKKS-SVSW------NAMINGYMKSGKINLARQLFGQMPGRNLI 201
C + A + +VF + +S S S N++I Y + + A +F Q+ +L
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
+WNS+ISG+ N R E L + +L G P+H+T+ S L + + L +G+ H ++
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 262 VKHCFDLDG-VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
++ D +L SL++MY+K G I +A VF ++ + +T++I G G G + A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVD 380
L F +M R G+KP +T + VL+ACSH LV EG+ F M + + I +EHY C+VD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 381 ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHN-LIEADPDATG 439
+ CRAG+L +A++I ++P P+ + +LL + HGN IGE+AA L+E P+ G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHP 495
Y LL+++YA G W K+ V+ ++ + GV K +++E +L+ G+ + P
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 198/450 (44%), Gaps = 58/450 (12%)
Query: 25 ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVN 84
+LL ++ H +L ++ ++ C + G+Q+H + + G FD + LV
Sbjct: 70 SLLRYQSGSHEFVL---YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVT 126
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFT 140
Y+ + + A+ + + + WN LI Y RN + ++ ++ M S+ D FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQMP 196
+ +++ A R V + S NA+I+ Y + GK+++AR+LF +M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT------------------- 237
R+ +SWN++I+ Y + EA +L + + G+ S VT
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 238 ----------------ILSALSAVSGLAVLGNGRWIHSFMVKHC---FDLDGVLGTSLIE 278
+++ L A S + L G+ H +++ C D+D V SLI
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV-RNSLIT 365
Query: 279 MYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
MYS+C + A VF+ + L W +II G + +++ L EM G P+ IT
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 339 FIGVLNACSHKGLVDEGNK--CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
+L + G + G + C+ + YK + + LVD+ ++G + AK + +
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL--WNSLVDMYAKSGEIIAAKRVFD 483
Query: 397 SMPMRPNKVIWMSLLSSSRNHGNLEIGEYA 426
SM R +KV + SL+ +G L GE A
Sbjct: 484 SMRKR-DKVTYTSLID---GYGRLGKGEVA 509
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 49/344 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFT----------------- 43
M + VSWN II+CY + +A L +M + T
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 44 LPCVI------------------KGCSRLHAVQEGKQIHGYVLK-IGFGFD-KFVQSSLV 83
L CV+ K CS + A++ GK H V++ F D V++SL+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 84 NMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAF 139
MY++ ++ A VF ++ + +WNS+I G+A N E L EM +
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSS-----VSWNAMINGYMKSGKINLARQLFGQ 194
T ++L A+ G ++ +E + ++ S + WN++++ Y KSG+I A+++F
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 195 MPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
M R+ +++ S+I GY G+ A+ F+ + + G+ P HVT+++ LSA S ++ G
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 255 RWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAI 296
W+ + M +H F + L + ++++Y + G ++ A +F I
Sbjct: 545 HWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
+L +WN IIS + +N RS + L ++ML P+ TL ++ +R+ +Q GK+ H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 65 GYVLKIGFGFDKFVQ-SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
Y+L+ D + +SLV+MYAK GE+ A++VFD M RD V++ SLIDGY R G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNA 174
EVA+ F +M D T A+L + V +F +M + ++
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 175 MINGYMKSGKINLARQLFGQMP 196
M++ Y ++G ++ AR +F +P
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIP 588
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 268/480 (55%), Gaps = 14/480 (2%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V++N++I + + +++LL+FR+ML L P T V+ CS G Q+HG
Sbjct: 258 VTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGL 313
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
+K G+ V ++ + MY+ + + G A KVF+ + ++D+V+WN++I Y + + A
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSA 373
Query: 127 MKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-NAMINGYMK 181
M ++ M D FT+ +LL +E + + S + NA+I+ Y K
Sbjct: 374 MSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 182 SGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG--LMPSHVTIL 239
+G+I A LF + +NLISWN++ISG+ NG E +E F LL+ ++P T+
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK 299
+ LS + L G H+++++H + ++G +LI MYS+CG+I+++L VF ++ K
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553
Query: 300 KLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDEGNKC 358
+ W ++I HG + A+ + M+ G + P A TF VL+ACSH GLV+EG +
Sbjct: 554 DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE-SMPMRPNKV-IWMSLLSSSRN 416
F+ M+ + ++ V+H+ CLVD+L RAGHL +A+++++ S ++V +W +L S+
Sbjct: 614 FNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAA 673
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
HG+L++G+ A L+E + D Y LSNIYA AG W + R + G +K GCS
Sbjct: 674 HGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 217/491 (44%), Gaps = 57/491 (11%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLH-HDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ TL++ N ++ + + +AL LF + L PD +++ I L G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H Y ++ G V ++L+++Y + G + +K FD++ + DV SW +L+ +
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 121 GNVEVAMKLFDEMPSRDAFT-WTALLDGLAKCGKVEAAREVFDQMPK------------- 166
G++E A ++FD+MP RD W A++ G + G E + E+F +M K
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 167 --------------------------KSSVSWNAMINGYMKSGKINLARQLFGQ--MPGR 198
SSV NA+I Y + A +F + + R
Sbjct: 197 LSMCDYGSLDFGKQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+ +++N +I G R E++ +F +L+ L P+ +T +S + + S A+ G +H
Sbjct: 256 DQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVH 311
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
+K ++ ++ + + MYS +A VF+++ K L W +I L
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
A+ ++ M IG+KP TF +L +++ C I ++ + +E L
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQAC----IIKFGLSSKIEISNAL 427
Query: 379 VDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD---- 434
+ + G +++A + E +R N + W +++S ++G G L+E++
Sbjct: 428 ISAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 435 PDATGCYTLLS 445
PDA TLLS
Sbjct: 487 PDAYTLSTLLS 497
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 7/169 (4%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD--LLPDGFTLPCVIKGCSRLHAVQEG 60
+ L+SWN IIS + HN + L F +L + +LPD +TL ++ C ++ G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q H YVL+ G + + ++L+NMY++ G + + +VF++M ++DVVSWNSLI Y+R+
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 121 GNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQM 164
G E A+ + M DA T++A+L + G VE E+F+ M
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 168/352 (47%), Gaps = 31/352 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ + LV+WN +IS Y A+ ++++M + PD FT ++ L ++
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE-- 406
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ ++K G + ++L++ Y+K G++ A +F++ + ++++SWN++I G+ N
Sbjct: 407 -MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465
Query: 121 GNVEVAMKLFD---EMPSR---DAFTWTALLDGLAKCGKVEAARE----VFDQMPKKSSV 170
G ++ F E R DA+T + LL + + V K ++
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL 525
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
NA+IN Y + G I + ++F QM ++++SWNS+IS Y +G A+ ++ + EG
Sbjct: 526 IGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 231 -LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG-----TSLIEMYSKCG 284
++P T + LSA S ++ G I + MV + GV+ + L+++ + G
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV----EFHGVIRNVDHFSCLVDLLGRAG 641
Query: 285 SIESALAVFKAIANKKLGH----WTAIIVGLGMHG---LADQALELFMEMRR 329
++ A ++ K I+ K +G W A+ HG L +L ME +
Sbjct: 642 HLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 208/478 (43%), Gaps = 23/478 (4%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN +I+ + ++ LFR+M + D F ++ C ++ GKQ+H V+
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVI 216
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDK--MVDRDVVSWNSLIDGYA---RNGNV 123
K GF V ++L+ MY + A VF++ + RD V++N +IDG A R+ ++
Sbjct: 217 KAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESL 276
Query: 124 EVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGY 179
V K+ + T+ ++ + C +V K K ++ NA + Y
Sbjct: 277 LVFRKMLEASLRPTDLTFVSV---MGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMY 333
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
A ++F + ++L++WN+MIS Y AM +++ + G+ P T
Sbjct: 334 SSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFG 393
Query: 240 SALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK 299
S L+ L VL + + ++K + +LI YSK G IE A +F+ K
Sbjct: 394 SLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 300 KLGHWTAIIVGLGMHGLADQALELF--MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
L W AII G +G + LE F + + + P A T +L+ C + G++
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
++ + T+ L+++ + G +Q + + M + + V W SL+S+ H
Sbjct: 511 THAYVLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRH 568
Query: 418 GNLE--IGEYAA-HNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
G E + Y + + PDA +LS A + + M++ GV+++
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRN 626
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 22/314 (7%)
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
LL + G + + ++ FD++ + SW +++ K G I A ++F +MP R+ ++
Sbjct: 97 TLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVA 156
Query: 203 -WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFM 261
WN+MI+G + +G ++ELF + K G+ + LS + L G+ +HS +
Sbjct: 157 IWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS-MCDYGSLDFGKQVHSLV 215
Query: 262 VKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLA-DQA 320
+K F + + +LI MY C + A VF+ T +V G+ G D++
Sbjct: 216 IKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES 275
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI----NEYKIV--PTVEH 374
L +F +M ++P +TF+ V+ +CS + G++ + I +Y +V T+
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTM 332
Query: 375 YGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH--GNLEIGEYAAHNLIE 432
Y D A + ES+ + + V W +++SS G + Y ++I
Sbjct: 333 YSSFED-------FGAAHKVFESLEEK-DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 433 ADPDATGCYTLLSN 446
PD +LL+
Sbjct: 385 VKPDEFTFGSLLAT 398
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 286/529 (54%), Gaps = 22/529 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQE 59
M + ++SW+++I YV + L LF++M+H PD T+ V+K C+ + +
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 60 GKQIHGYVLKIGFGF-DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G+ +HG+ ++ GF D FV +SL++MY+K ++ A +VFD+ R++VSWNS++ G+
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 119 RNGNVEVAMKLF----DEMPSRDAFTWTALL------DGLAKCGKVEAAREVFDQMPKKS 168
N + A+++F E D T +LL + C + + + + +
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV--IIRRGYESN 362
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
V+ +++I+ Y ++ A + M ++++S ++MISG GR EA+ +F +
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIE 287
P+ +T++S L+A S A L +W H ++ ++ + +GTS+++ Y+KCG+IE
Sbjct: 423 ---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIE 479
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
A F I K + WT II ++GL D+AL LF EM++ G P+A+T++ L+AC+
Sbjct: 480 MARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACN 539
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP--MRPNKV 405
H GLV +G F M+ E P+++HY C+VD+L RAG + A +I+++P ++
Sbjct: 540 HGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGAS 598
Query: 406 IWMSLLSSSRNH-GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMM 464
W ++LS RN L I ++E +P + Y L S+ +AA W+ V+ +R ++
Sbjct: 599 AWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLV 658
Query: 465 KERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKL 513
KER V AG S+V RF+ GDK + ++ + + +KL
Sbjct: 659 KERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKL 707
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 213/428 (49%), Gaps = 17/428 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M+ VSWN+I+ + + L F ++ P+ TL VI C L +G
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DG 144
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
++IHGYV++ GF VQ+S++ MYA + ARK+FD+M +RDV+SW+ +I Y ++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 121 GNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK-----SSV 170
V +KLF EM D T T++L ++ R V ++
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
N++I+ Y K ++ A ++F + RN++SWNS+++G+ N R+ EA+E+F ++++E
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ VT++S L + IH +++ ++ + V +SLI+ Y+ C ++ A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
V ++ K + + +I GL G +D+A+ +F MR P+AIT I +LNACS
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSA 440
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
+ + I + + +VD + G ++ A+ + + + N + W +
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEK-NIISWTVI 499
Query: 411 LSSSRNHG 418
+S+ +G
Sbjct: 500 ISAYAING 507
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 13/276 (4%)
Query: 168 SSVSW----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
+ +SW N++ + YMK G + + F M R+ +SWN ++ G G E + F
Sbjct: 56 AKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWF 115
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
L G P+ T++ + A L +G IH ++++ F + S++ MY+
Sbjct: 116 SKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADS 173
Query: 284 GSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGV 342
S+ SA +F ++ + + W+ +I L+LF EM +P +T V
Sbjct: 174 DSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
L AC+ +D G I + V L+D+ + + A + + R
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR- 291
Query: 403 NKVIWMSLLS----SSRNHGNLEIGEYAAHNLIEAD 434
N V W S+L+ + R LE+ +E D
Sbjct: 292 NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL-GTSLIEMYSKCGSIESALAVFKAI 296
++S S + V N ++ + K C L + G S+ + Y KCG + S L F +
Sbjct: 28 VVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCM 87
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
++ W I+ GL +G ++ L F ++R G +P+ T + V++AC
Sbjct: 88 NSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC 137
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/598 (29%), Positives = 285/598 (47%), Gaps = 92/598 (15%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN I+ V + +AL L+R M L DG+ LP +++ C L + H V+
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----------------------- 105
+IG + V + L+ +Y K G MG A +F +M R
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 106 ------------DVVSWNSLIDGYARNGNVEVAMKLF----------------------- 130
D V+W S++ +++ G E +K F
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 131 ---------------------DEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS 169
+ +PSR+A L+ K GKV+ A +F Q+ K
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNA-----LIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMP--------GRNLISWNSMISGYQLNGRFLEAME 221
SWN++I ++ +GK++ A LF ++ N+++W S+I G + GR +++E
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 222 LFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
F + ++ + VTI LS + L L GR IH +++ + ++ +L+ MY+
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYA 480
Query: 282 KCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
KCG + VF+AI +K L W +II G GMHG A++AL +F M G P I +
Sbjct: 481 KCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVA 540
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
VL+ACSH GLV++G + F M + + P EHY C+VD+L R G L++A I+++MPM
Sbjct: 541 VLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPME 600
Query: 402 PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVR 461
P + +LL+S R H N++I E A L +P+ TG Y LLSNIY+A G+W++ ++VR
Sbjct: 601 PKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Query: 462 EMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
+ K++ + K +G S +E + K +F G + + IY L ++ + G D
Sbjct: 661 ALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 172/398 (43%), Gaps = 80/398 (20%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP V+W ++SC+ + D L F M G L C+ L A+ ++
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+HGYV+K GF +++L+++Y K G++ A +F ++ ++ + SWNSLI + G
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 123 VEVAMKLFDEMPS--------RDAFTWTALLDGLAKCGKVEAAREVFDQM---------- 164
++ A+ LF E+ + TWT+++ G G+ + + E F QM
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 165 ------------PK------------KSSVS-----WNAMINGYMKSGKINLARQLFGQM 195
P ++S+S NA++N Y K G ++ +F +
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
++LISWNS+I GY ++G +A+ +F+ ++ G P + +++ LSA S ++ GR
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
I M K F L+ + H+ I+ LG G
Sbjct: 556 EIFYSMSKR-FGLE-----------------------------PQQEHYACIVDLLGRVG 585
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
+A E+ ++ + M+P +LN+C VD
Sbjct: 586 FLKEASEI---VKNMPMEPKVCVLGALLNSCRMHKNVD 620
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 160/358 (44%), Gaps = 51/358 (14%)
Query: 56 AVQEGKQIHGYVLKIGFGFDK-FVQSSLVNMYAKWGEMGLARKVFDK---MVDRDVVSWN 111
Q+ +Q+H VL F F + ++L+++YA+ G + AR VF+ ++ D+ WN
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 112 SLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP-- 165
S++ +G E A++L+ M R D + +L G+ R Q+
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 166 --KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF 223
K++ N ++ Y K+G++ A LF +MP RN +SWN MI G+ A+++F
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 224 EVLLKEGLMPSHVTILSALS-----------------------AVSG------------L 248
E + +E P VT S LS AVSG L
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL 307
Query: 249 AVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAII 308
L +H +++K F+ +LI +Y K G ++ A +F+ I NK + W ++I
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLI 367
Query: 309 VGLGMHGLADQALELFMEMRRI----GMKPHAITFIGVLNACSHKGLVDEGNKCFDMM 362
G D+AL LF E+ + +K + +T+ V+ C+ +G D+ + F M
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 248/477 (51%), Gaps = 15/477 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + VSWN +I Y + +A+ +F+ M ++ P I H E
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS----PVTIINLLSAHVSHE- 266
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H V+K G D V +SLV Y++ G + A +++ +V S++ YA
Sbjct: 267 -PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMI 176
G++++A+ F + DA +L G K ++ + K + ++
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 177 NG----YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELF-EVLLKEGL 231
NG Y K + LF Q+ LISWNS+ISG +GR A E+F +++L GL
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+P +TI S L+ S L L G+ +H + +++ F+ + + T+LI+MY+KCG+ A +
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VFK+I W ++I G + GL +AL ++EMR G+KP ITF+GVL+AC+H G
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 565
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
VDEG CF MI E+ I PT++HY +V +L RA +A +I M ++P+ +W +LL
Sbjct: 566 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 625
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
S+ H LE+GEY A + D G Y L+SN+YA WD V VR MMK+ G
Sbjct: 626 SACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 215/450 (47%), Gaps = 24/450 (5%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCS-RLHAVQ-EGKQIHGYV 67
+L+ SC +H S+ + +FR +L L P+ FT+ ++ + ++ + + +Q+ ++
Sbjct: 18 SLLKSC-IHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHL 76
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
K G +V++SL+N+Y K G + A+ +FD+M +RD V WN+LI GY+RNG A
Sbjct: 77 TKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAW 136
Query: 128 KLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGY 179
KLF M S A T LL +CG V R V K S NA+I+ Y
Sbjct: 137 KLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFY 196
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
K ++ A LF +M ++ +SWN+MI Y +G EA+ +F+ + ++ + S VTI+
Sbjct: 197 SKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 256
Query: 240 SALSA-VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
+ LSA VS +H +VK D + TSL+ YS+CG + SA ++ +
Sbjct: 257 NLLSAHVS-------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKC 358
+ T+I+ G D A+ F + R++ MK A+ +G+L+ C +D G
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
I T+ G L+ + + ++ + E + P + W S++S G
Sbjct: 370 HGYAIKSGLCTKTLVVNG-LITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQSG 427
Query: 419 NLEIGEYAAHNLIEAD---PDATGCYTLLS 445
H ++ PDA +LL+
Sbjct: 428 RASTAFEVFHQMMLTGGLLPDAITIASLLA 457
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 191/430 (44%), Gaps = 35/430 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + V WN +I Y N DA LF ML P TL ++ C + V +G
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HG K G D V+++L++ Y+K E+G A +F +M D+ VSWN++I Y+++
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 121 GNVEVAMKLFDEMPSRDA----FTWTALLDG----------LAKCGKVEAAREVFDQMPK 166
G E A+ +F M ++ T LL + KCG V V
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVV------ 284
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
+++ Y + G + A +L+ +++ S++S Y G A+ F
Sbjct: 285 ------TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
+ + V ++ L + + G +H + +K ++ LI MYSK +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFIGVLNA 345
E+ L +F+ + L W ++I G G A A E+F +M G+ P AIT +L
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 346 CSHKGLVDEGNKCFDMMI-NEYKIVPTVEHYGC--LVDILCRAGHLQQAKNIIESMPMRP 402
CS ++ G + + N ++ E++ C L+D+ + G+ QA+++ +S+ P
Sbjct: 459 CSQLCCLNLGKELHGYTLRNNFE----NENFVCTALIDMYAKCGNEVQAESVFKSIK-AP 513
Query: 403 NKVIWMSLLS 412
W S++S
Sbjct: 514 CTATWNSMIS 523
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 265/511 (51%), Gaps = 47/511 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLH--HDLLPDGFTLPCVIKGCSRLHAV- 57
M + +VSW +IS + N +AL+LF +M + P+G TL + C L
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 58 -QEGKQIHGYVLKIGF---GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSL 113
+ G+Q+H V+ G+ D + SLV+MYA G + A+ + ++ D+ S N +
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF--DLQSCNII 374
Query: 114 IDGYARNGNVEVAMKLFDEMPS-RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW 172
I+ Y +NG++E A LF+ + S D +WT+++DG + G V A +F ++ K V+W
Sbjct: 375 INRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTW 434
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
MI+G ++ N F EA L +++ GL
Sbjct: 435 TVMISGLVQ-------------------------------NELFAEAASLLSDMVRCGLK 463
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKH--CFDLDGVLGTSLIEMYSKCGSIESAL 290
P + T LS+ + L G+ IH + K C+D D +L SL+ MY+KCG+IE A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F + K W ++I+GL HGLAD+AL LF EM G KP+++TF+GVL+ACSH G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
L+ G + F M Y I P ++HY ++D+L RAG L++A+ I ++P P+ ++ +L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 411 LS----SSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
L + R+ I E AA L+E DP + L N+YA G+ D +R+ M
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 467 RGVLKDAGCSIVEHRGKLNRFIVGDKSHPQT 497
+GV K GCS V G+ N F+ GDKS +
Sbjct: 704 KGVKKTPGCSWVVVNGRANVFLSGDKSASEA 734
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 97/491 (19%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V W ++S Y ++A +LF M +++ L +K C R++
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK-CRRMN--------EA 127
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+ L + + ++ G A ++FD+M +R+VVSWN+L+ G RNG++E
Sbjct: 128 WTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEK 187
Query: 126 AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKI 185
A ++FD MPSRD +W A++ G + +E A+ +F M +K+ V+W +M+ GY + G +
Sbjct: 188 AKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDV 247
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK--EGLMPSHVTILSALS 243
A +LF +MP RN++SW +MISG+ N + EA+ LF + K + + P+ T++S
Sbjct: 248 REAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 244 AVSGLAVLGN--GRWIHSFMVKH---CFDLDGVLGTSLIEMYSKCGSIESALAVFKA--- 295
A GL V G +H+ ++ + D DG L SL+ MY+ G I SA ++
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD 367
Query: 296 ------IANKKLGH---------------------WTAI--------------------- 307
I N+ L + WT++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 308 ----------IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG-- 355
I GL + L +A L +M R G+KP T+ +L++ +D+G
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 356 --------NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
C+D P + LV + + G ++ A I M ++ + V W
Sbjct: 488 IHCVIAKTTACYD---------PDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSW 537
Query: 408 MSLLSSSRNHG 418
S++ +HG
Sbjct: 538 NSMIMGLSHHG 548
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 266/494 (53%), Gaps = 45/494 (9%)
Query: 56 AVQEGKQIHGYVLKIGFGFDK-FVQSSL-VNMYAKWGEMGLARKVFDKMVDRDVVSWNSL 113
++ E +IH ++ +G ++ FV +L + + G++ A K K+ D WN +
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 114 IDGYARNGNVEVAMKLFDEMPS----RDAFTWTAL-----------LDGLAKCGKVEA-- 156
I G++ + N E ++ ++ +M D T+ L L G C V++
Sbjct: 80 IRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGL 139
Query: 157 ----------------------AREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQ 194
AR++FD+MP K+ V+WN++++ Y KSG + AR +F +
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 195 MPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH-VTILSALSAVSGLAVLGN 253
M R++++W+SMI GY G + +A+E+F+ +++ G ++ VT++S + A + L L
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH--WTAIIVGL 311
G+ +H +++ L +L TSLI+MY+KCGSI A +VF + K+ W AII GL
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 312 GMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPT 371
HG ++L+LF +MR + P ITF+ +L ACSH GLV E F + E P
Sbjct: 320 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPK 378
Query: 372 VEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLI 431
EHY C+VD+L RAG ++ A + I MP++P + +LL+ NHGNLE+ E LI
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 432 EADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGD 491
E P G Y L+N+YA ++ +RE M+++GV K AG SI++ G +RFI D
Sbjct: 439 ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHD 498
Query: 492 KSHPQTKAIYAKLR 505
K+H + IYA L+
Sbjct: 499 KTHFHSDKIYAVLQ 512
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 173/392 (44%), Gaps = 76/392 (19%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ P WN +I + ++ ++ ++ QML LLPD T P ++K SRL + G
Sbjct: 68 LSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLG 127
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H V+K G +D F+ ++L++MY + + ARK+FD+M +++V+WNS++D YA++
Sbjct: 128 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN------- 173
G+V A +FDEM RD TW++++DG K G+ A E+FDQM + S N
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 174 ---------------------------------AMINGYMKSGKINLARQLF--GQMPGR 198
++I+ Y K G I A +F +
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+ + WN++I G +G E+++LF + + + P +T L L+A S H
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS-----------H 356
Query: 259 SFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD 318
+VK + L S E S+ H+ ++ L GL
Sbjct: 357 GGLVKEAWHFFKSLKESGAEPKSE--------------------HYACMVDVLSRAGLVK 396
Query: 319 QALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
A + EM +KP +LN C + G
Sbjct: 397 DAHDFISEM---PIKPTGSMLGALLNGCINHG 425
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 275/528 (52%), Gaps = 11/528 (2%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
++S N++ ++ N + +L ++ML D TL V+ C K IH
Sbjct: 121 VISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHA 179
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+ G+ + V + L+ Y K G R VFD M R+V++ ++I G N E
Sbjct: 180 LAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHED 239
Query: 126 AMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NAMIN 177
++LF M ++ T+ + L + ++ +++ + K S +A+++
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K G I A +F + +S ++ G NG EA++ F +L+ G+
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV-EIDAN 358
Query: 238 ILSALSAVSGLA-VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
++SA+ VS + LG G+ +HS ++K F + + LI MYSKCG + + VF+ +
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ W ++I HG AL+L+ EM + +KP +TF+ +L+ACSH GL+D+G
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
+ + M + I P EHY C++D+L RAG L++AK+ I+S+P++P+ IW +LL +
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSF 538
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
HG+ E+GEYAA L + PD++ + L++NIY++ GKW + + + MK GV K+ G S
Sbjct: 539 HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Query: 477 IVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVL 524
+E K + F+V DK HPQ +AIY L + + G+ PD +L
Sbjct: 599 SIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 193/401 (48%), Gaps = 18/401 (4%)
Query: 78 VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRD 137
V +SL+++YAK G++ A K+FD+M RDV+S N + G+ RN E L M
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 138 AFTWTALLDGLAKCGKVEA--------AREVFDQMPKKSSVSWNAMINGYMKSGKINLAR 189
F L L+ C E A + K+ SV N +I Y K G R
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVG-NKLITSYFKCGCSVSGR 210
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
+F M RN+I+ ++ISG N + + LF ++ + + P+ VT LSAL+A SG
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
+ G+ IH+ + K+ + + + ++L++MYSKCGSIE A +F++ T I+V
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
GL +G ++A++ F+ M + G++ A VL + G + ++I
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN--LEIGEYAA 427
T + G L+++ + G L ++ + MP R N V W S++++ HG+ + Y
Sbjct: 391 NTFVNNG-LINMYSKCGDLTDSQTVFRRMPKR-NYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 428 HNLIEADPDATGCYTLLSNIYAAA--GKWDKVSHVREMMKE 466
+E P T LS ++A + G DK + MKE
Sbjct: 449 MTTLEVKPTDV---TFLSLLHACSHVGLIDKGRELLNEMKE 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
+ + V WN++++ Y K GK+ A +LF +MP R++IS N + G+ N L +
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+L G H T+ LS + IH+ + +D + +G LI Y KCG
Sbjct: 147 MLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
S VF ++++ + TA+I GL + L + L LF MRR + P+++T++ L A
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
CS + EG + ++ +Y I + L+D+ + G ++ A I ES
Sbjct: 266 CSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 264/518 (50%), Gaps = 11/518 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN +IS Y ++ L L +M L PD T + + ++ G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H ++K GF D ++++L+ MY K G+ + +V + + ++DVV W +I G R
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 121 GNVEVAMKLFDEM-PSRDAFTWTALLDGLAKC---GKVEAAREVFDQMPKK----SSVSW 172
G E A+ +F EM S + A+ +A C G + V + + + +
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL-LKEGL 231
N++I Y K G ++ + +F +M R+L+SWN++ISGY N +A+ LFE + K
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
T++S L A S L G+ IH +++ ++ T+L++MYSKCG +E+A
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
F +I+ K + W +I G G HG D ALE++ E GM+P+ + F+ VL++CSH G+
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
V +G K F M+ ++ + P EH C+VD+LCRA ++ A + RP+ + +L
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIIL 624
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+ R +G E+ + ++IE P G Y L + +AA +WD VS M+ G+ K
Sbjct: 625 DACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKK 684
Query: 472 DAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKL--REM 507
G S +E GK F + SH KL REM
Sbjct: 685 LPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLKLLSREM 722
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 205/389 (52%), Gaps = 7/389 (1%)
Query: 29 FRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAK 88
F ML + LLPD FT P ++K C+ L + G IH VL GF D ++ SSLVN+YAK
Sbjct: 34 FSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK 93
Query: 89 WGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRD----AFTWTAL 144
+G + ARKVF++M +RDVV W ++I Y+R G V A L +EM + T +
Sbjct: 94 FGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEM 153
Query: 145 LDGLAKCGKVEAAREVFDQMPKKSSVS-WNAMINGYMKSGKINLARQLFGQMPGRNLISW 203
L G+ + +++ + ++ N+M+N Y K + A+ LF QM R+++SW
Sbjct: 154 LSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSW 213
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
N+MISGY G E ++L + +GL P T ++LS + L GR +H +VK
Sbjct: 214 NTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK 273
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
FD+D L T+LI MY KCG E++ V + I NK + WT +I GL G A++AL +
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 324 FMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILC 383
F EM + G + V+ +C+ G D G ++ + T L+ +
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT-PALNSLITMYA 392
Query: 384 RAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+ GHL ++ I E M R + V W +++S
Sbjct: 393 KCGHLDKSLVIFERMNER-DLVSWNAIIS 420
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 211/432 (48%), Gaps = 14/432 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V W +I CY +A L +M + P TL ++ G + +Q
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ-- 164
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H + + GF D V +S++N+Y K +G A+ +FD+M RD+VSWN++I GYA
Sbjct: 165 -CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-SVSW--- 172
GN+ +KL M D T+ A L +E R + Q+ K V
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
A+I Y+K GK + ++ +P ++++ W MISG GR +A+ +F +L+ G
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
S I S +++ + L G +H ++++H + LD SLI MY+KCG ++ +L +
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR-RIGMKPHAITFIGVLNACSHKGL 351
F+ + + L W AII G + +AL LF EM+ + + + T + +L ACS G
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+ G ++I + I P LVD+ + G+L+ A+ +S+ + + V W L+
Sbjct: 464 LPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILI 521
Query: 412 SSSRNHGNLEIG 423
+ HG +I
Sbjct: 522 AGYGFHGKGDIA 533
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
+NS I+ +G + + F +L L+P T S L A + L L G IH ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 263 KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
+ F D + +SL+ +Y+K G + A VF+ + + + HWTA+I G+ +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 323 LFMEMRRIGMKPHAITFIGVLNA--------CSHKGLVDEGNKCFDMMINEYKIVPTVEH 374
L EMR G+KP +T + +L+ C H V G C ++N
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNS--------- 184
Query: 375 YGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
++++ C+ H+ AK++ + M R + V W +++S + GN+
Sbjct: 185 ---MLNLYCKCDHVGDAKDLFDQMEQR-DMVSWNTMISGYASVGNM 226
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 268/511 (52%), Gaps = 42/511 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V+WNLIIS YV DA+ + + M L D TL ++ +R ++ G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++ Y ++ F + D+V ++++D YA+
Sbjct: 395 KEVQCYCIRHSF-------------------------------ESDIVLASTVMDMYAKC 423
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMI 176
G++ A K+FD +D W LL A+ G A +F M + ++WN +I
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 177 NGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+++G+++ A+ +F QM NLISW +M++G NG EA+ + + GL
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIESALA 291
P+ +I ALSA + LA L GR IH +++++ V + TSL++MY+KCG I A
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF + +L A+I ++G +A+ L+ + +G+KP IT VL+AC+H G
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+++ + F ++++ + P +EHYG +VD+L AG ++A +IE MP +P+ + SL+
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLV 723
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
+S E+ +Y + L+E++P+ +G Y +SN YA G WD+V +REMMK +G+ K
Sbjct: 724 ASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKK 783
Query: 472 DAGCSIVEHRGK--LNRFIVGDKSHPQTKAI 500
GCS ++ G+ ++ F+ DK+H + I
Sbjct: 784 KPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 241/473 (50%), Gaps = 24/473 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ SW II AL+ F +ML +++ PD F +P V K C L + G+ +HG
Sbjct: 138 VFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
YV+K G FV SSL +MY K G + A KVFD++ DR+ V+WN+L+ GY +NG E
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEE 257
Query: 126 AMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAARE-----VFDQMPKKSSVSWNA 174
A++LF +M P+R T + L A G VE ++ + + M + ++ +
Sbjct: 258 AIRLFSDMRKQGVEPTR--VTVSTCLSASANMGGVEEGKQSHAIAIVNGM-ELDNILGTS 314
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
++N Y K G I A +F +M +++++WN +ISGY G +A+ + +++ E L
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
VT+ + +SA + L G+ + + ++H F+ D VL +++++MY+KCGSI A VF
Sbjct: 375 CVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD 434
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDE 354
+ K L W ++ GL+ +AL LF M+ G+ P+ IT+ ++ + G VDE
Sbjct: 435 STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDE 494
Query: 355 GNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLL 411
F + + I+P + + +++ + + G ++A + M +RPN L
Sbjct: 495 AKDMF-LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 412 SSSRNHGNLEIGE----YAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHV 460
S+ + +L IG Y NL + T L ++YA G +K V
Sbjct: 554 SACAHLASLHIGRTIHGYIIRNLQHS--SLVSIETSLVDMYAKCGDINKAEKV 604
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 211/429 (49%), Gaps = 16/429 (3%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
H P+ S+ +S N +AL L +M +L +++GC + GK
Sbjct: 31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGK 90
Query: 62 QIHGYVLKIG--FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
QIH +LK G + ++++++ LV YAK + +A +F K+ R+V SW ++I R
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCR 150
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAK-CGKVEAAR-------EVFDQMPKKSSVS 171
G E A+ F EM + F ++ + K CG ++ +R V +
Sbjct: 151 IGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFV 210
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+++ + Y K G ++ A ++F ++P RN ++WN+++ GY NG+ EA+ LF + K+G+
Sbjct: 211 ASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV 270
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P+ VT+ + LSA + + + G+ H+ + + +LD +LGTSL+ Y K G IE A
Sbjct: 271 EPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEM 330
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
VF + K + W II G GL + A+ + MR +K +T +++A +
Sbjct: 331 VFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTEN 390
Query: 352 VDEGN--KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
+ G +C+ + + + ++D+ + G + AK + +S + + ++W +
Sbjct: 391 LKLGKEVQCYCI---RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNT 446
Query: 410 LLSSSRNHG 418
LL++ G
Sbjct: 447 LLAAYAESG 455
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 286/533 (53%), Gaps = 22/533 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSN-DALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M ++SWN ++S +A+++FR M+ + D + VI C ++
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+QIHG +K G+ V + L++ Y+K G + + VF +M +R+VVSW ++I
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI----- 349
Query: 120 NGNVEVAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
+ N + A+ +F M + T+ L++ + +++ ++ K VS
Sbjct: 350 SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
N+ I Y K + A++ F + R +ISWN+MISG+ NG EA+++F E
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-T 468
Query: 232 MPSHVTILSALSAVSGLAVLG--NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
MP+ T S L+A++ + G+ H+ ++K + V+ ++L++MY+K G+I+ +
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
VF ++ K WT+II HG + + LF +M + + P +TF+ VL AC+ K
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G+VD+G + F+MMI Y + P+ EHY C+VD+L RAG L++A+ ++ +P P + + S
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 410 LLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGV 469
+L S R HGN+++G A +E P+ +G Y + NIYA +WDK + +R+ M+++ V
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
Query: 470 LKDAGCS---IVEHRGKLNR--FIVGDKSHPQTKAIYAKLREMSKKLKLAGHV 517
K+AG S + + G L F GDKSHP++ IY + + ++ L G V
Sbjct: 709 SKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 234/482 (48%), Gaps = 37/482 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +VSWN I+S + N AL +M ++ D FT + C G Q+
Sbjct: 140 PDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
V+K G D V +S + MY++ G AR+VFD+M +D++SWNSL+ G ++ G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 124 EV-AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW----NA 174
A+ +F +M D ++T+++ ++ AR++ K+ S N
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 175 MINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPS 234
+++ Y K G + + +F QM RN++SW +MIS + +A+ +F + +G+ P+
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPN 371
Query: 235 HVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK 294
VT + ++AV + G IH +K F + +G S I +Y+K ++E A F+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 295 AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG--LV 352
I +++ W A+I G +G + +AL++F+ M P+ TF VLNA + V
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISV 490
Query: 353 DEGNKC----FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
+G +C + +N +V + L+D+ + G++ +++ + M + N+ +W
Sbjct: 491 KQGQRCHAHLLKLGLNSCPVVSSA-----LLDMYAKRGNIDESEKVFNEMSQK-NQFVWT 544
Query: 409 SLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAA--AGKWDKVSHVREMM 464
S++S+ +HG+ E H +I+ + PD T LS + A G DK + MM
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPDLV---TFLSVLTACNRKGMVDKGYEIFNMM 601
Query: 465 KE 466
E
Sbjct: 602 IE 603
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 205/430 (47%), Gaps = 26/430 (6%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP---DGFTLPCVIKGCSRLHAVQ 58
+ S N IS + + AL +F++ L D TL +K C ++
Sbjct: 36 QRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLK 93
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G QIHG+ GF V ++++ MY K G A +F+ +VD DVVSWN+++ G+
Sbjct: 94 RGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD 153
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTW-TALLDGLAKCG---KVEAAREVFDQMPKKSSV 170
N ++A+ M S DAFT+ TAL + G ++ V + V
Sbjct: 154 DN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRF-LEAMELFEVLLKE 229
N+ I Y +SG AR++F +M +++ISWNS++SG G F EA+ +F +++E
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
G+ HV+ S ++ L R IH +K ++ +G L+ YSKCG +E+
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
+VF ++ + + WT +I D A+ +F+ MR G+ P+ +TF+G++NA
Sbjct: 331 KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 350 GLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
+ EG K + I + P+V + + + + L+ AK E + R + W
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFRE-IISWN 442
Query: 409 SLLSSSRNHG 418
+++S +G
Sbjct: 443 AMISGFAQNG 452
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 259/490 (52%), Gaps = 27/490 (5%)
Query: 6 LVSWNLIISCYVH-----NHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+V+WN++I + NHR++ ++L D+ D + +I+ C+ ++ G
Sbjct: 102 IVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAG 161
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H ++K G F +SLV+ Y K G + AR+VF+ ++DRD+V WN+L+ Y N
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN 221
Query: 121 GNVEVAMKLFDEMPSR------DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-- 172
G ++ A L M S D FT+++LL ++E +++ + K VS+
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFK---VSYQF 274
Query: 173 -----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
A++N Y KS ++ AR+ F M RN++SWN+MI G+ NG EAM LF +L
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
E L P +T S LS+ + + + + + + + K + SLI YS+ G++
Sbjct: 335 LENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLS 394
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
AL F +I L WT++I L HG A+++L++F M + ++P ITF+ VL+ACS
Sbjct: 395 EALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACS 453
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
H GLV EG +CF M YKI EHY CL+D+L RAG + +A +++ SMP P+
Sbjct: 454 HGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHAL 513
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKER 467
+ H E ++ A L+E +P Y++LSN Y + G W++ + +R+ +
Sbjct: 514 AAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRN 573
Query: 468 GV-LKDAGCS 476
K GCS
Sbjct: 574 CYNPKTPGCS 583
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 189/389 (48%), Gaps = 23/389 (5%)
Query: 49 KGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVV 108
K + L + + KQ HG+++K G F+Q+ L+ Y K E A K+FD+M R++V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 109 SWNSLIDGY-ARNGNVE---------VAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAR 158
+WN LI G R+G+ ++ LF ++ S D ++ L+ ++A
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDV-SLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 159 EVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
++ M K+ S ++++ Y K G I AR++F + R+L+ WN+++S Y LNG
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 215 RFLEAMELFEVL--LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVL 272
EA L +++ K + T S LSA + G+ IH+ + K + D +
Sbjct: 223 MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPV 278
Query: 273 GTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
T+L+ MY+K + A F+++ + + W A+IVG +G +A+ LF +M +
Sbjct: 279 ATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENL 338
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAK 392
+P +TF VL++C+ + E K M+ + + L+ R G+L +A
Sbjct: 339 QPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEAL 397
Query: 393 NIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
S+ P+ V W S++ + +HG E
Sbjct: 398 LCFHSI-REPDLVSWTSVIGALASHGFAE 425
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 262/484 (54%), Gaps = 16/484 (3%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
+SW ++S YV AL +F +M+ L + FTL +K CS L V+ G+ HG
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V+ GF ++ F+ S+L +Y E AR+VFD+M + DV+ W +++ +++N E A
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 127 MKLFDEMPS-----RDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMIN 177
+ LF M D T+ +L +++ +E+ ++ + V +++++
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K G + ARQ+F M +N +SW++++ GY NG +A+E+F + ++ L
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----C 364
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
+ L A +GLA + G+ IH V+ CF + ++ ++LI++Y K G I+SA V+ +
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ + + W A++ L +G ++A+ F +M + G+KP I+FI +L AC H G+VDEG
Sbjct: 424 SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS-SR 415
F +M Y I P EHY C++D+L RAG ++A+N++E R + +W LL +
Sbjct: 484 NYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAA 543
Query: 416 NHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
N + E A ++E +P Y LLSN+Y A G+ ++R++M RGV K G
Sbjct: 544 NADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQ 603
Query: 476 SIVE 479
S ++
Sbjct: 604 SWID 607
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 195/395 (49%), Gaps = 36/395 (9%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGE-MGLARKVFDKMVDR 105
+++ C+++ + G Q H +V+K G D+ V +SL+++Y K G M R+VFD +
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 106 DVVSWNSLIDGYARNGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVF 161
D +SW S++ GY A+++F EM S + FT ++ + ++ G+V R F
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR-CF 185
Query: 162 DQMPKKSSVSWNAMING-----YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRF 216
+ WN I+ Y + + AR++F +MP ++I W +++S + N +
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 217 LEAMELFEVLLK-EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
EA+ LF + + +GL+P T + L+A L L G+ IH ++ + + V+ +S
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L++MY KCGS+ A VF ++ K W+A++ G +G ++A+E+F EM +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKD 361
Query: 336 AITFIGVLNACSHKGLVDEGNK---------CFDMMINEYKIVPTVEHYGCLVDILCRAG 386
F VL AC+ V G + CF +I E L+D+ ++G
Sbjct: 362 LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE----------SALIDLYGKSG 411
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
+ A + M +R N + W ++LS+ +G E
Sbjct: 412 CIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGE 445
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M K VSW+ ++ Y N A+ +FR+M DL + V+K C+ L AV+ G
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLG 381
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K+IHG ++ G + V+S+L+++Y K G + A +V+ KM R++++WN+++ A+N
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----- 171
G E A+ F++M + D ++ A+L G V+ R F M K +
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRN 199
++ MI+ ++G A L + RN
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRN 529
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 209/347 (60%), Gaps = 5/347 (1%)
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP 196
D FT L+ + +++A ++FD+ P++ V++N +I+G +K+ +I AR+LF MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW 256
R+L+SWNS+ISGY EA++LF+ ++ GL P +V I+S LSA + G+
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 257 IHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGL 316
IH + + +D L T L++ Y+KCG I++A+ +F+ ++K L W A+I GL MHG
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 317 ADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYG 376
+ ++ F +M G+KP +TFI VL CSH GLVDE FD M + Y + ++HYG
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Query: 377 CLVDILCRAGHLQQAKNIIESMPM----RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE 432
C+ D+L RAG +++A +IE MP R + W LL R HGN+EI E AA+ +
Sbjct: 391 CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Query: 433 ADPDATGCYTLLSNIYAAAGKWDKVSHVREMM-KERGVLKDAGCSIV 478
P+ G Y ++ +YA A +W++V VRE++ +++ V K+ G S V
Sbjct: 451 LSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 174/377 (46%), Gaps = 33/377 (8%)
Query: 4 PTLVSWNLIIS-CYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG-- 60
P+ +N II C +H S + F +M + PD T P V K C+ A + G
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA---AKKNGDL 133
Query: 61 ---KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
K +H L+ G D F ++L+ +Y+ + A ++FD+ RDVV++N LIDG
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 118 ARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWN 173
+ + A +LFD MP RD +W +L+ G A+ A ++FD+M K +V+
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISG----YQLNGRFLEAMELFEVLLKE 229
+ ++ +SG + + + L + + +G Y G AME+FE
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE----- 308
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSF---MVKHCFDLDGVLGTSLIEMYSKCGSI 286
+ S T+ + + ++GLA+ GNG + MV DGV S++ S G +
Sbjct: 309 --LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 287 ESALAVFKAI-----ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI-GMKPHAITFI 340
+ A +F + N+++ H+ + LG GL ++A E+ +M + G + + +
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 341 GVLNACSHKGLVDEGNK 357
G+L C G ++ K
Sbjct: 427 GLLGGCRIHGNIEIAEK 443
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 258/486 (53%), Gaps = 17/486 (3%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L +N +I Y + A +F Q+ L D F+ +K CSR V G+ +HG
Sbjct: 90 LFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHG 149
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYARNGNVE 124
L+ GF ++++L++ Y G++ ARKVFD+M D V++++L++GY +
Sbjct: 150 IALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKA 209
Query: 125 VAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AM 175
+A+ LF M + T + L ++ G + A E + K + + A+
Sbjct: 210 LALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA-ESAHVLCIKIGLDLDLHLITAL 268
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
I Y K+G I+ AR++F +++++WN MI Y G E + L + E + P+
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T + LS+ + GR + + + LD +LGT+L++MY+K G +E A+ +F
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELF--MEMRRIGMKPHAITFIGVLNACSHKGLVD 353
+ +K + WTA+I G G HGLA +A+ LF ME ++P+ ITF+ VLNACSH GLV
Sbjct: 389 MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVM 448
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
EG +CF M+ Y P VEHYGC+VD+L RAG L++A +I ++P+ + W +LL++
Sbjct: 449 EGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Query: 414 SRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
R +GN ++GE L E LL+ +A AG +K S E+ K R K+A
Sbjct: 509 CRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK-SLDNELNKGR---KEA 564
Query: 474 GCSIVE 479
G S +E
Sbjct: 565 GYSAIE 570
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 187/369 (50%), Gaps = 12/369 (3%)
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
E +IHGY++K G D F S L+ ++ ++ A +F+ + + ++ +N++I GY+
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYS 101
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-- 172
+ E A +F+++ ++ D F++ L ++ V + + + +
Sbjct: 102 ISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 173 --NAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
NA+I+ Y GKI+ AR++F +MP + ++++++++GY + A++LF ++ K
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
++ + T+LS LSA+S L L H +K DLD L T+LI MY K G I SA
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
+F K + W +I GL ++ + L +M+ MKP++ TF+G+L++C++
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS 341
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G D++ E +I LVD+ + G L++A I M + K W +
Sbjct: 342 EAAFVGRTVADLL-EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS-WTA 399
Query: 410 LLSSSRNHG 418
++S HG
Sbjct: 400 MISGYGAHG 408
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 47/326 (14%)
Query: 185 INLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSA 244
I A +F + NL +N+MI GY ++ A +F L +GL + ++ L +
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 245 VSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK-KLGH 303
S + G +H ++ F + L +LI Y CG I A VF +
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS---------------- 347
++ ++ G AL+LF MR+ + + T + L+A S
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 348 -------------------HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHL 388
G + + FD I + V + C++D + G L
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK-----DVVTWNCMIDQYAKTGLL 309
Query: 389 QQAKNIIESM---PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCY--TL 443
++ ++ M M+PN ++ LLSS +G A +L+E + A T
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA-DLLEEERIALDAILGTA 368
Query: 444 LSNIYAAAGKWDKVSHVREMMKERGV 469
L ++YA G +K + MK++ V
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDV 394
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 265/501 (52%), Gaps = 12/501 (2%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
V+WN +I + N + D L+ FR ML + P FT V+ GCS+L + GK IH
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
++ D + ++L++MY G+M A VF ++ + ++VSWNS+I G + NG E A
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQA 385
Query: 127 MKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMIN 177
M ++ + P D +T++A + A+ + + + Q+ K +S +++
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 178 GYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
Y K+ + A+++F M R+++ W MI G+ G A++ F + +E +
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
+ S + A S +A+L G H ++ FD + +L++MY K G E+A +F +
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS 565
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
N L W +++ HG+ ++AL F ++ G P A+T++ +L ACSH+G +G
Sbjct: 566 NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKF 625
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV-IWMSLLSSSRN 416
++ M E I +HY C+V+++ +AG + +A +IE P N+ +W +LLS+ N
Sbjct: 626 LWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 417 HGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
NL+IG YAA +++ DP+ T + LLSN+YA G+W+ V+ +R ++ KD G S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 477 IVE-HRGKLNRFIVGDKSHPQ 496
+E + F GD+S+P+
Sbjct: 745 WIEVNNNNTQVFSSGDQSNPE 765
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 241/484 (49%), Gaps = 21/484 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHR-SNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
M +VS+N + S Y N ++ A L M + P+ T +++ C+ L V
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G ++ ++K+G+ + VQ+S++ MY+ G++ AR++FD + +RD V+WN++I G +
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 120 NGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-- 171
N +E + F M P++ FT++ +L+G +K G + + ++ S++
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQ--FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 172 --WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
NA+++ Y G + A +FG++ NL+SWNS+ISG NG +AM ++ LL+
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 230 GL-MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
P T +A+SA + +G+ +H + K ++ +GT+L+ MY K ES
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 289 ALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
A VF + + + WT +IVG G ++ A++ F+EM R + + V+ ACS
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 349 KGLVDEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIW 407
++ +G + I + V +V G LVD+ + G + A+ I S+ P+ W
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSV--CGALVDMYGKNGKYETAETIF-SLASNPDLKCW 572
Query: 408 MSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
S+L + HG +E ++E PDA +LL+ + G + + MK
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC-SHRGSTLQGKFLWNQMK 631
Query: 466 ERGV 469
E+G+
Sbjct: 632 EQGI 635
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 15/306 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQE 59
+H P LVSWN IIS N A+L++R++L PD +T I +
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK +HG V K+G+ FV ++L++MY K E A+KVFD M +RDVV W +I G++R
Sbjct: 421 GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR--EVFDQMPKKSSVS-- 171
GN E+A++ F EM D F+ +++ + C + R EVF + ++
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSV---IGACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 172 ---WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
A+++ Y K+GK A +F +L WNSM+ Y +G +A+ FE +L+
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
G MP VT LS L+A S G+++ + M + + ++ + SK G ++
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDE 657
Query: 289 ALAVFK 294
AL + +
Sbjct: 658 ALELIE 663
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 179/390 (45%), Gaps = 15/390 (3%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGF---DKFVQSSLVNMYAKWGEMGLARKVFDKMV 103
+ + C + ++ +QIH VL G G + ++L++MY + G + ARKVFDKM
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 104 DRDVVSWNSLIDGYARNGN-VEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAR 158
R+VVS+N+L Y+RN + A L M ++ T+T+L+ A V
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 159 EVFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
+ Q+ K + V +++ Y G + AR++F + R+ ++WN+MI G N
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
+ + + F +L G+ P+ T L+ S L G+ IH+ ++ D L
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM-K 333
+L++MY CG + A VF I N L W +II G +G +QA+ ++ + R+ +
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
P TF ++A + G K + + +V L+ + + + A+
Sbjct: 400 PDEYTFSAAISATAEPERFVHG-KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
+ + M R + V+W ++ GN E+
Sbjct: 459 VFDVMKER-DVVLWTEMIVGHSRLGNSELA 487
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 28/272 (10%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +V W +I + S A+ F +M DGF+L VI CS + +++G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ H ++ GF V +LV+MY K G+ A +F + D+ WNS++ Y+++
Sbjct: 523 EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQH 582
Query: 121 GNVEVAMKLFDE------MPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS--- 171
G VE A+ F++ MP DA T+ +LL + G + +++QM ++ +
Sbjct: 583 GMVEKALSFFEQILENGFMP--DAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
Query: 172 -WNAMINGYMKSGKINLARQLFGQM-PGRNLIS-WNSMISGYQLNGRFLE-AMELFEVLL 227
++ M+N K+G ++ A +L Q PG N W +++S +N R L+ + E +L
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSAC-VNTRNLQIGLYAAEQIL 699
Query: 228 KEGLMPSHVT---ILSALSAVSGLAVLGNGRW 256
K L P +LS L AV NGRW
Sbjct: 700 K--LDPEDTATHILLSNLYAV-------NGRW 722
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 132/303 (43%), Gaps = 17/303 (5%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLIS-------WNSMISGYQLNGRFLEAMELFEV 225
N +I+ Y++ + AR++F +MP RN+++ + + G L+ + ++ + F++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK-LGSFQM 84
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH---CFDLDGVLGTSLIEMYSK 282
+ L +++ + VL R IH+ ++ +LI MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 283 CGSIESALAVFKAIANKKLGHWTAIIVGLGMH-GLADQALELFMEMRRIGMKPHAITFIG 341
CGS+E A VF + ++ + + A+ + A A L M +KP++ TF
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
++ C+ V G+ + I + V ++ + G L+ A+ I + + R
Sbjct: 205 LVQVCAVLEDVLMGSS-LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 402 PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG-CYTLLSNIYAAAGKWD--KVS 458
+ V W +++ S + +E G N++ + D T Y+++ N + G + K+
Sbjct: 264 -DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 459 HVR 461
H R
Sbjct: 323 HAR 325
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 240/458 (52%), Gaps = 41/458 (8%)
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+IH ++L+ + + +++ A +VF + + +V+ +N++I Y+ G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDG--------LAKC------------------ 151
++ F M SR D +T+ LL KC
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 152 ---------GKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
G++ A++VFD+M +++ V WN MI G+ SG + LF QM R+++S
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
WNSMIS GR EA+ELF ++ +G P T+++ L + L VL G+WIHS
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 263 KHCFDLDGV-LGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQAL 321
D + +G +L++ Y K G +E+A A+F+ + + + W +I G ++G + +
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 322 ELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVD 380
+LF M G + P+ TF+GVL CS+ G V+ G + F +M+ +K+ EHYG +VD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 381 ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGC 440
++ R+G + +A +++MP+ N +W SLLS+ R+HG++++ E AA L++ +P +G
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 441 YTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
Y LLSN+YA G+W V VR +MK+ + K G S +
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 45/374 (12%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ P ++ +N +I CY ++L F M + D +T ++K CS L ++ G
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K +HG +++ GF ++ +V +Y G MG A+KVFD+M +R+VV WN +I G+ +
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSV---- 170
G+VE + LF +M R +W +++ L+KCG+ A E+F +M P +++V
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 171 ------------SW------------------NAMINGYMKSGKINLARQLFGQMPGRNL 200
W NA+++ Y KSG + A +F +M RN+
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+SWN++ISG +NG+ ++LF+ +++EG + P+ T L L+ S + G +
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 260 FMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAI-ANKKLGHWTAIIVGLGMHGL 316
M++ F L+ +++++ S+ G I A K + N W +++ HG
Sbjct: 362 LMMER-FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
Query: 317 ADQALELFMEMRRI 330
A ME+ +I
Sbjct: 421 VKLAEVAAMELVKI 434
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
+ A ++F + N++ +N+MI Y L G LE++ F + G+ T L +
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK----------------------- 282
S L+ L G+ +H +++ F G + ++E+Y+
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 283 --------CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
G +E L +FK ++ + + W ++I L G +ALELF EM G P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
T + VL + G++D G + + LVD C++G L+ A I
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA--G 452
M R N V W +L+S S +G E G +IE A T L + + G
Sbjct: 293 FRKM-QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 453 KWDKVSHVREMMKERGVLKDAGCSIVEHRGKL 484
+ ++ + +M ER L+ + EH G +
Sbjct: 352 QVERGEELFGLMMERFKLE----ARTEHYGAM 379
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 260/472 (55%), Gaps = 24/472 (5%)
Query: 23 NDALLLFRQMLHHDLLPD--GFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQS 80
ND L LF Q+ H PD T V+ CS L + G+Q+H ++K G ++
Sbjct: 66 NDTLALFLQI--HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 81 SLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR---- 136
+L++MY+K+G + + +VF+ + ++D+VSWN+L+ G+ RNG + A+ +F M
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMP---KKSSVSWNAMINGYMKSGKINLARQLFG 193
FT ++++ A ++ ++V + + V AMI+ Y G IN A +++
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYN 243
Query: 194 QMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
+ + + NS+ISG N + EA LL P+ + S+L+ S + L
Sbjct: 244 SLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLW 298
Query: 253 NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
G+ IH +++ F D L L++MY KCG I A +F+AI +K + WT++I
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 313 MHGLADQALELFMEM--RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
++G +ALE+F EM G+ P+++TF+ V++AC+H GLV EG +CF MM +Y++VP
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVP 418
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK----VIWMSLLSSSRNHGNLEIGEYA 426
EHY C +DIL +AG ++ ++E M N+ IW+++LS+ + +L GEY
Sbjct: 419 GTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYV 478
Query: 427 AHNLI-EADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
A L+ E P+ Y L+SN YAA GKWD V +R +K +G++K AG S+
Sbjct: 479 ARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 19/335 (5%)
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAK 150
A +FD++ RD+ S NS + + R+GN + LF ++ P + T+T +L +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 151 CGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSM 206
E R+V M K+ ++S A+I+ Y K G + + ++F + ++L+SWN++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF 266
+SG+ NG+ EA+ +F + +E + S T+ S + + L +L G+ +H+ +V
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 267 DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA--LELF 324
DL VLGT++I YS G I A+ V+ ++ H +++ + G E F
Sbjct: 217 DLV-VLGTAMISFYSSVGLINEAMKVYNSLNV----HTDEVMLNSLISGCIRNRNYKEAF 271
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
+ M R +P+ L CS + G + + + V + L+D+ +
Sbjct: 272 LLMSR--QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMDMYGK 328
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
G + QA+ I ++P + + V W S++ + +G+
Sbjct: 329 CGQIVQARTIFRAIPSK-SVVSWTSMIDAYAVNGD 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 5 TLVSWNLIISCYVHNHRSNDALLLFRQMLHH--DLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
++VSW +I Y N AL +FR+M +LP+ T VI C+ V+EGK+
Sbjct: 346 SVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE 405
Query: 63 IHGYV---LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVS-----WNSLI 114
G + ++ G + +V +++ +K GE ++ ++M++ D S W +++
Sbjct: 406 CFGMMKEKYRLVPGTEHYV--CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVL 463
Query: 115 DGYARNGNVE----VAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV 170
+ N ++ VA +L +E +A + + + A GK + E+ ++ K V
Sbjct: 464 SACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLV 523
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 272/524 (51%), Gaps = 51/524 (9%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + + S N +S + N DA +F + T+ V+ GC ++ G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGG 148
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H +K GF + +V +SLV+MY++ GE LA ++F+K+ + VV++N+ I G N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 121 GNVEVAMKLFD-------EMPSRDAFT--------------------------------- 140
G + + +F+ E P+ F
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 141 WTALLDGLAKCGKVEAAREVFDQMP-KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRN 199
TAL+D +KC ++A VF ++ ++ +SWN++I+G M +G+ A +LF ++
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 200 L----ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
L +WNS+ISG+ G+ +EA + FE +L ++PS + S LSA S + L NG+
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG--HWTAIIVGLGM 313
IH ++K + D + TSLI+MY KCG A +F K W +I G G
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
HG + A+E+F +R ++P TF VL+ACSH G V++G++ F +M EY P+ E
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
H GC++D+L R+G L++AK +I+ M + V SLL S R H + +GE AA L E
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 434 DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
+P+ + +LS+IYAA +W+ V +R+++ ++ ++K G S+
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 196/363 (53%), Gaps = 13/363 (3%)
Query: 39 PDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKV 98
P+ FT P ++K C++L V +G+ +H V+K GF D F ++LV+MY K ++ A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 99 FDKMVDRDVVSWNSLIDGYARNGNVEVAMKLF-DEMPSRDAFTWTALLDGLAKCGKVEAA 157
D+M +R + S N+ + G NG A ++F D S + L CG +E
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 158 REVFDQMPKKSSVSW-----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQL 212
++ + KS ++++ Y + G+ LA ++F ++P ++++++N+ ISG
Sbjct: 149 MQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 213 NGRFLEAMELFEVLLK-EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV 271
NG +F ++ K P+ VT ++A++A + L L GR +H ++K F + +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 272 LGTSLIEMYSKCGSIESALAVFKAIAN-KKLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
+GT+LI+MYSKC +SA VF + + + L W ++I G+ ++G + A+ELF ++
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 331 GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQ 390
G+KP + T+ +++ S G V E K F+ M++ +VP+++ CL +L +
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS-VVMVPSLK---CLTSLLSACSDIWT 383
Query: 391 AKN 393
KN
Sbjct: 384 LKN 386
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 243/439 (55%), Gaps = 9/439 (2%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+VSW+ +I+ Y + ++A+ LFR M+ + P+ TL V++GC+ + A + GK IH
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
Y +K + +++++MYAK G A K F+++ +D V++N+L GY + G+
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANK 485
Query: 126 AMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----WNAMIN 177
A ++ M D+ T +L A C V+ Q+ K S +A+IN
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALIN 545
Query: 178 GYMKSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ K + A LF + ++ +SWN M++GY L+G+ EA+ F + E P+ V
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T ++ + A + L+ L G +HS +++ F +G SL++MY+KCG IES+ F I
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+NK + W ++ HGLA A+ LF+ M+ +KP +++F+ VL+AC H GLV+EG
Sbjct: 666 SNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGK 725
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
+ F+ M +KI VEHY C+VD+L +AG +A ++ M ++ + +W +LL+SSR
Sbjct: 726 RIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRM 785
Query: 417 HGNLEIGEYAAHNLIEADP 435
H NL + A L++ +P
Sbjct: 786 HCNLWLSNAALCQLVKLEP 804
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 203/407 (49%), Gaps = 12/407 (2%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQEGKQ 62
P +V WN +I Y +AL F M + PD ++ +K C+ ++G +
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
IH + ++G D ++ ++LV MY K ++ AR+VFDKM +DVV+WN+++ G A+NG
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGC 181
Query: 123 VEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW--NAMI 176
A+ LF +M S D + L+ ++K K + R + + KK + + +I
Sbjct: 182 SSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLI 241
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y + A +F ++ ++ SW +M++ Y NG F E +ELF+++ + + V
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
SAL A + + L G IH + V+ D + TSL+ MYSKCG +E A +F I
Sbjct: 302 AAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
++ + W+A+I G D+A+ LF +M RI +KP+A+T VL C+ G
Sbjct: 362 EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGK 421
Query: 357 K--CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
C+ + + I +E ++ + + G A E +P++
Sbjct: 422 SIHCYAIKAD---IESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 222/462 (48%), Gaps = 18/462 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
MH +V+WN ++S N S+ ALLLF M + D +L +I S+L
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVC 220
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +HG V+K GF F S L++MY ++ A VF+++ +D SW +++ YA N
Sbjct: 221 RCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 121 GNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS----W 172
G E ++LFD M + D + L A G + + D ++ +
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
++++ Y K G++ +A QLF + R+++SW++MI+ Y+ G+ EA+ LF +++ +
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P+ VT+ S L +G+A G+ IH + +K + + T++I MY+KCG AL
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F+ + K + A+ G G A++A +++ M+ G+ P + T +G+L C+
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 353 DEGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
G+ + +I + V H L+++ + L A + + + V W ++
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 412 SSSRNHGNLE--IGEYAAHNLIEADPDATGCYTLLSNIYAAA 451
+ HG E + + + + P+A T ++ + AAA
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAV---TFVNIVRAAA 615
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 196/438 (44%), Gaps = 20/438 (4%)
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
Q+HG ++ G + L+N Y+ + L+R +FD + D VV WNS+I GY R G
Sbjct: 23 QVHGSLIVSGLK----PHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 122 NVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFD---QMPKKSSVSW- 172
A+ F M D +++T L A + + D +M +S V
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
A++ Y K+ + ARQ+F +M +++++WN+M+SG NG A+ LF + +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
HV++ + + AVS L R +H ++K F + LI+MY C + +A +V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESV 256
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
F+ + K W ++ +G ++ LELF MR ++ + + L A ++ G +
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
+G D + + ++ V L+ + + G L+ A+ + ++ R + V W ++++
Sbjct: 317 VKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR-DVVSWSAMIA 374
Query: 413 SSRNHGNLE--IGEYAAHNLIEADPDATGCYTLLSNIYA-AAGKWDKVSHVREMMKERGV 469
S G + I + I P+A ++L AA + K H + +
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 470 LKDAGCSIVEHRGKLNRF 487
+ +++ K RF
Sbjct: 435 ELETATAVISMYAKCGRF 452
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNL 200
+T LL L +C +V + N +IN Y + +L+R +F + +
Sbjct: 5 YTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGV 64
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+ WNSMI GY G EA+ F + +E G+ P + AL A +G G IH
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQ 319
+ + + D +GT+L+EMY K + SA VF + K + W ++ GL +G +
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
AL LF +MR + ++ ++ A S D ++I + I L+
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG---LI 241
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLE 421
D+ C L A+++ E + R ++ W +++++ ++G E
Sbjct: 242 DMYCNCADLYAAESVFEEV-WRKDESSWGTMMAAYAHNGFFE 282
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 269/570 (47%), Gaps = 85/570 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVI------KGC--- 51
+ +P VS+ +I ++ +A+ +FR M + D L ++ +GC
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWN 111
S ++ + GKQIH L++GFG D + +SL+ +YAK +M A +F +M + +VVSWN
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 112 SLIDGYA-----------------------------------RNGNVEVAMKLFDEMPSR 136
+I G+ R+G+VE ++F +P
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQP 379
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVSW------------------ 172
W A+L G + E A F QM P K+++S
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 173 ---------------NAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRF 216
+ +I Y + K+ ++ +F ++ WNSMISG++ N
Sbjct: 440 GVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 217 LEAMELFEVLLKEGLM-PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS 275
+A+ LF + + ++ P+ + + LS+ S L L +GR H +VK + D + T+
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA 559
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L +MY KCG I+SA F A+ K W +I G G +G D+A+ L+ +M G KP
Sbjct: 560 LTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPD 619
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
ITF+ VL ACSH GLV+ G + M + I P ++HY C+VD L RAG L+ A+ +
Sbjct: 620 GITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLA 679
Query: 396 ESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWD 455
E+ P + + V+W LLSS R HG++ + A L+ DP ++ Y LLSN Y++ +WD
Sbjct: 680 EATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWD 739
Query: 456 KVSHVREMMKERGVLKDAGCSIVEHRGKLN 485
+ ++ +M + V K G S + L+
Sbjct: 740 DSAALQGLMNKNRVHKTPGQSWTTYGNDLD 769
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 215/497 (43%), Gaps = 88/497 (17%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN +IS V AL+++++M+ LP FTL V+ CS++ G
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG 157
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEM-GLARKVFDKMVDRDVVSWNSLIDGYAR 119
+ HG +K G + FV ++L++MYAK G + +VF+ + + VS+ ++I G AR
Sbjct: 158 MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 120 NGNVEVAMKLFDEMPSR------------------------------------------- 136
V A+++F M +
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 137 -----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGY------------ 179
D +LL+ AK + A +F +MP+ + VSWN MI G+
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 180 -----------------------MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRF 216
+SG + R++F +P ++ +WN+M+SGY +
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHY 397
Query: 217 LEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSL 276
EA+ F + + L P T+ LS+ + L L G+ IH +++ + + + L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 277 IEMYSKCGSIESALAVFKAIANK-KLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKP 334
I +YS+C +E + +F N+ + W ++I G + L +AL LF M + + P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+ +F VL++CS + G + +++ + + L D+ C+ G + A+
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQF 576
Query: 395 IESMPMRPNKVIWMSLL 411
+++ +R N VIW ++
Sbjct: 577 FDAV-LRKNTVIWNEMI 592
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 195/417 (46%), Gaps = 57/417 (13%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK IHG+++++G D ++ + L+++Y + G+ ARKVFD+M RDV SWN+ + +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVS-- 171
G++ A ++FD MP RD +W ++ L + G E A V+ +M P + +++
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 172 -------------------------------WNAMINGYMKSGKI-NLARQLFGQMPGRN 199
NA+++ Y K G I + ++F + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV---TILSALSAVSGL----AVLG 252
+S+ ++I G + LEA+++F ++ ++G+ V ILS + G + G
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 253 N--GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG 310
N G+ IH ++ F D L SL+E+Y+K + A +F + + W +IVG
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
G +D+++E MR G +P+ +T I VL AC G V+ G + F + P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----P 379
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGE 424
+V + ++ H ++A + M ++P+K +LSS LE G+
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 238/446 (53%), Gaps = 27/446 (6%)
Query: 39 PDGFTLPCVIKGCSRLHAVQEGKQIH----GYVLKIGFGFDKFVQSSLVNMYAKWGEMGL 94
P+ F +++ C L A+ G ++H Y+L+ G + S LV +YA G +
Sbjct: 92 PEIFA--SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLG----ISSKLVRLYASCGYAEV 145
Query: 95 ARKVFDKMVDRDV--VSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGL 148
A +VFD+M RD +WNSLI GYA G E AM L+ +M D FT+ +L
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 149 AKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWN 204
G V+ + + K+ NA++ Y K G I AR +F +P ++ +SWN
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKH 264
SM++GY +G EA+++F ++++ G+ P V I S L+ V +GR +H ++++
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---HGRQLHGWVIRR 322
Query: 265 CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELF 324
+ + + +LI +YSK G + A +F + + W AII H L+ F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYF 379
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
+M R KP ITF+ VL+ C++ G+V++G + F +M EY I P +EHY C+V++ R
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 385 AGHLQQAKN-IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTL 443
AG +++A + I++ M + +W +LL + HGN +IGE AA L E +PD + L
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 444 LSNIYAAAGKWDKVSHVREMMKERGV 469
L IY+ A + + V VR+MM +RG+
Sbjct: 500 LIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
+WN +IS Y + DA+ L+ QM + PD FT P V+K C + +VQ G+ IH +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K GFG+D +V ++LV MYAK G++ AR VFD + +D VSWNS++ GY +G + A+
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 128 KLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW-----NAMI 176
+F M P + A + LA+ + R++ + ++ + W NA+I
Sbjct: 282 DIFRLMVQNGIEPDKVAISSV-----LARVLSFKHGRQLHGWVIRR-GMEWELSVANALI 335
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
Y K G++ A +F QM R+ +SWN++IS + N ++ FE + + P +
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGI 392
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALAVFK 294
T +S LS + ++ +G + S M K + +D + ++ +Y + G +E A ++
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKE-YGIDPKMEHYACMVNLYGRAGMMEEAYSMIV 451
Query: 295 AIANKKLGH--WTAIIVGLGMHGLAD 318
+ G W A++ +HG D
Sbjct: 452 QEMGLEAGPTVWGALLYACYLHGNTD 477
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 128/234 (54%), Gaps = 21/234 (8%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VSWN +++ Y+H+ ++AL +FR M+ + + PD + V+ +R+ + + G+Q+HG+
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGW 318
Query: 67 VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVA 126
V++ G ++ V ++L+ +Y+K G++G A +FD+M++RD VSWN++I +++N N
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---G 375
Query: 127 MKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMIN 177
+K F++M D T+ ++L A G VE +F M K+ + + M+N
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 178 GYMKSGKINLARQLFGQMPGRNL--ISWNSMISGYQLNGRF----LEAMELFEV 225
Y ++G + A + Q G W +++ L+G + A LFE+
Sbjct: 436 LYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL 489
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 243/467 (52%), Gaps = 9/467 (1%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
WN II Y H+ L LF Q+L D PD FT C+ +G S + + IHG +
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAI 133
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
G GFD+ S++V Y+K G + A K+F + D D+ WN +I GY G + +
Sbjct: 134 VSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGIN 193
Query: 129 LFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYM 180
LF+ M R + +T AL GL + A V K S A++N Y
Sbjct: 194 LFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
+ I A +F + +L++ +S+I+GY G EA+ LF L G P V +
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
L + + L+ +G+ +HS++++ +LD + ++LI+MYSKCG ++ A+++F I K
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
+ + ++I+GLG+HG A A E F E+ +G+ P ITF +L C H GL+++G + F+
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
M +E+ I P EHY +V ++ AG L++A + S+ + I +LLS H N
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENT 493
Query: 421 EIGEYAAHNLIEADPDATGCY-TLLSNIYAAAGKWDKVSHVREMMKE 466
+ E A N+ + + Y +LSN+YA G+WD+V +R+ + E
Sbjct: 494 HLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 22/372 (5%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+++H +V K D + + L YA ++ ARK+FD +R V WNS+I YA+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 121 GNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREV----------FDQMPK 166
+ LF ++ D FT+ L G ++ + R + FDQ
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQ--- 141
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL 226
+ +A++ Y K+G I A +LF +P +L WN MI GY G + + + LF ++
Sbjct: 142 ---ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
G P+ T+++ S + ++L +H+F +K D +G +L+ MYS+C I
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
SA +VF +I+ L +++I G G +AL LF E+R G KP + VL +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVI 406
+ G + +I + ++ L+D+ + G L+ A ++ +P + N V
Sbjct: 319 AELSDSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK-NIVS 376
Query: 407 WMSLLSSSRNHG 418
+ SL+ HG
Sbjct: 377 FNSLILGLGLHG 388
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ +P LV+ + +I+ Y +AL LF ++ PD + V+ C+ L G
Sbjct: 268 ISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG 327
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K++H YV+++G D V S+L++MY+K G + A +F + ++++VS+NSLI G +
Sbjct: 328 KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLH 387
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK 167
G A + F E+ D T++ALL G + +E+F++M +
Sbjct: 388 GFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 254/485 (52%), Gaps = 24/485 (4%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMG----LARKVFDKM 102
+I R + V++ K H + G + + S L+ + + A +FD +
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLF---------DEMPSRDAFTWTALLDGLAKC-- 151
+ ++++I +R+ + ++ F D PS F + ++ L C
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFL-IVACLKACFF 132
Query: 152 --GKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISG 209
GK V + + S ++ Y++ + AR++F ++P +++ W+ +++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 210 YQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF-DL 268
Y G E +E+F +L +GL P ++ +AL+A + + L G+WIH F+ K + +
Sbjct: 193 YVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D +GT+L++MY+KCG IE+A+ VFK + + + W A+I G +G A +A+ +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 329 R-IGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGH 387
R G+KP ++ +GVL AC+H G ++EG + M Y+I P EHY C+VD++CRAG
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 388 LQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD----PDATGCYTL 443
L A N+IE MPM+P +W +LL+ R H N+E+GE A NL++ + +
Sbjct: 373 LDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQ 432
Query: 444 LSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAK 503
LSNIY + + + S VR M+++RGV K G S++E G + +F+ GD SHP I+
Sbjct: 433 LSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTV 492
Query: 504 LREMS 508
+ +S
Sbjct: 493 IHLLS 497
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 13/302 (4%)
Query: 26 LLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIG-FGFDKFVQSSLVN 84
LL + D+ P T +I C + GKQIH +V+K G F D VQ+ ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 85 MYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFT 140
+Y + + ARKVFD++ DVV W+ L++GY R G +++F EM + D F+
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-----AMINGYMKSGKINLARQLFGQM 195
T L A+ G + + + + + KKS + + A+++ Y K G I A ++F ++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 196 PGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE-GLMPSHVTILSALSAVSGLAVLGNG 254
RN+ SW ++I GY G +AM E L +E G+ P V +L L+A + L G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 255 R-WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAIIVGLG 312
R + + ++ + ++++ + G ++ AL + + + K L W A++ G
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 313 MH 314
H
Sbjct: 401 TH 402
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 121/219 (55%), Gaps = 12/219 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V W+++++ YV ++ L +FR+ML L PD F++ + C+++ A+ +GK
Sbjct: 180 QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKW 239
Query: 63 IHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
IH +V K + D FV ++LV+MYAK G + A +VF K+ R+V SW +LI GYA G
Sbjct: 240 IHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Query: 122 NVEVAMKLFDEMPSRDAFT--WTALLDGLAKC---GKVEAAREVFDQMPKKSSVS----- 171
+ AM + + D LL LA C G +E R + + M + ++
Sbjct: 300 YAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEH 359
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLIS-WNSMISG 209
++ +++ ++G+++ A L +MP + L S W ++++G
Sbjct: 360 YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 123/291 (42%), Gaps = 13/291 (4%)
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMKSGKIN----LARQL 191
+W +L+ +C V+ + +++ + + ++ ++ +N A +
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 192 FGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE---GLMPSHVTILSALSAVSGL 248
F + N +++MI + + + F +++KE + PS++T + A
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKA 129
Query: 249 AVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
G+ IH ++VK+ F D + T ++ +Y + + A VF I + W +
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVL 189
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
+ G GL + LE+F EM G++P + L AC+ G + +G + + +
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW 249
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
I V LVD+ + G ++ A + + + R N W +L+ +G
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR-NVFSWAALIGGYAAYG 299
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 238/444 (53%), Gaps = 18/444 (4%)
Query: 52 SRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWN 111
S+ ++Q KQIH ++ IG + S L+++ + + A + ++ + V +N
Sbjct: 17 SKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYN 75
Query: 112 SLIDGYARNGN---VEVAMKLFDEMPSR-------DAFTWTALLDGLA------KCGKVE 155
+LI N N +A L+D++ S + FT+ +L + G+
Sbjct: 76 TLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRAL 135
Query: 156 AAREV-FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
A + F + A++ Y GK+ AR LF ++ +L +WN++++ Y +
Sbjct: 136 HAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
E+ + ++ + P+ +++++ + + + L G W H +++K+ L+ +GT
Sbjct: 196 EIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGT 255
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
SLI++YSKCG + A VF ++ + + + A+I GL +HG + +EL+ + G+ P
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+ TF+ ++ACSH GLVDEG + F+ M Y I P VEHYGCLVD+L R+G L++A+
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKW 454
I+ MP++PN +W S L SS+ HG+ E GE A +L+ + + +G Y LLSNIYA +W
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Query: 455 DKVSHVREMMKERGVLKDAGCSIV 478
V RE+MK+ V K G S +
Sbjct: 436 TDVEKTRELMKDHRVNKSPGISTL 459
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHR---SNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAV 57
+ +P L +WN +++ Y ++ + LLLF +M + P+ +L +IK C+ L
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEF 232
Query: 58 QEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
G H YVLK ++FV +SL+++Y+K G + ARKVFD+M RDV +N++I G
Sbjct: 233 VRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGL 292
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-- 171
A +G + ++L+ + S+ D+ T+ + + G V+ ++F+ M +
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 172 ---WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRF 216
+ +++ +SG++ A + +MP + N W S + Q +G F
Sbjct: 353 VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDF 401
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 255/471 (54%), Gaps = 19/471 (4%)
Query: 48 IKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNM--YAKWGEMGLARKVFDKMVDR 105
+K CS +++ QIHG + D F+ S LV + + ++ AR + D
Sbjct: 20 LKLCS---SIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 106 DVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVF 161
+WN L GY+ + + ++ ++ EM R + T+ LL A + A R++
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 162 DQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFL 217
++ K N +I+ Y K + AR++F +M RN++SWNS+++ NG+
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 218 EAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLI 277
E F ++ + P T++ LSA G L G+ +HS ++ +L+ LGT+L+
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 278 EMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHA 336
+MY+K G +E A VF+ + +K + W+A+IVGL +G A++AL+LF +M + ++P+
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 337 ITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
+TF+GVL ACSH GLVD+G K F M +KI P + HYG +VDIL RAG L +A + I+
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 397 SMPMRPNKVIWMSLLSSSRNHGNLE---IGEYAAHNLIEADPDATGCYTLLSNIYAAAGK 453
MP P+ V+W +LLS+ H + + IGE LIE +P +G +++N +A A
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 454 WDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKL 504
W + + VR +MKE + K AG S +E G +RF G + +IY L
Sbjct: 435 WAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 13/220 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN I++ V N + N F +M+ PD T+ ++ C + G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLG 231
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
K +H V+ + + ++LV+MYAK G + AR VF++MVD++V +W+++I G A+
Sbjct: 232 KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQY 291
Query: 121 GNVEVAMKLFDEMPSRDA-----FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
G E A++LF +M + T+ +L + G V+ + F +M K +
Sbjct: 292 GFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMI 351
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISG 209
+ AM++ ++G++N A +MP + + W +++S
Sbjct: 352 HYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 189/317 (59%), Gaps = 2/317 (0%)
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y SG++ A ++F +MP RN++SW +MISG+ R ++L+ + K P+ T
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
+ LSA +G LG GR +H + + SLI MY KCG ++ A +F +N
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 299 KKLGHWTAIIVGLGMHGLADQALELF-MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
K + W ++I G HGLA QA+ELF + M + G KP AIT++GVL++C H GLV EG K
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
F++M E+ + P + HY CLVD+L R G LQ+A +IE+MPM+PN VIW SLL S R H
Sbjct: 345 FFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Query: 418 GNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSI 477
G++ G AA + +PD + L+N+YA+ G W + + VR++MK++G+ + GCS
Sbjct: 404 GDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSW 463
Query: 478 VEHRGKLNRFIVGDKSH 494
+E + F D S+
Sbjct: 464 IEINNYVFMFKAEDGSN 480
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 158/325 (48%), Gaps = 43/325 (13%)
Query: 40 DGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVF 99
D + L ++ C + G H LK GF D ++ SSLV +Y GE+ A KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 100 DKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVE 155
++M +R+VVSW ++I G+A+ V++ +KL+ +M + +T+TALL G +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 156 AAREVFDQMPKKSSVSW----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQ 211
R V Q S+ N++I+ Y K G + A ++F Q ++++SWNSMI+GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 212 LNGRFLEAMELFEVLL-KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG 270
+G ++A+ELFE+++ K G P +T L LS+ ++ GR + M +H
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL---- 354
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
+L H++ ++ LG GL +ALEL M
Sbjct: 355 ---------------------------KPELNHYSCLVDLLGRFGLLQEALELIENM--- 384
Query: 331 GMKPHAITFIGVLNACSHKGLVDEG 355
MKP+++ + +L +C G V G
Sbjct: 385 PMKPNSVIWGSLLFSCRVHGDVWTG 409
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW +IS + R + L L+ +M P+ +T ++ C+ A+ +G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H L +G + +SL++MY K G++ A ++FD+ ++DVVSWNS+I GYA++
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 121 GNVEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
G A++LF+ M + DA T+ +L G V+ R+ F+ M K
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFE--VLLK 228
++ +++ + G + A +L MP + N + W S++ +++G + E ++L+
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLE 420
Query: 229 EGLMPSHVTILSALSAV 245
+HV + + ++V
Sbjct: 421 PDCAATHVQLANLYASV 437
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 253 NGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
G H +K F D LG+SL+ +Y G +E+A VF+ + + + WTA+I G
Sbjct: 138 TGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFA 197
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN----KCFDMMINEYKI 368
D L+L+ +MR+ P+ TF +L+AC+ G + +G + M + Y
Sbjct: 198 QEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH 257
Query: 369 VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ L+ + C+ G L+ A I + + + V W S+++ HG
Sbjct: 258 ISN-----SLISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGYAQHG 301
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 254/514 (49%), Gaps = 69/514 (13%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
++S +I +V R +A F+++L + P+ FT VI + V+ GKQ+H
Sbjct: 58 VISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHC 117
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
Y LK MGLA VF
Sbjct: 118 YALK----------------------MGLASNVF-------------------------- 129
Query: 126 AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKI 185
+A+L+ K + AR FD + VS +I+GY+K +
Sbjct: 130 --------------VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEF 175
Query: 186 NLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL-MPSHVTILSALSA 244
A LF MP R++++WN++I G+ GR EA+ F +L+EG+ +P+ T A++A
Sbjct: 176 EEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITA 235
Query: 245 VSGLAVLGNGRWIHSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESALAVFKAIANKK--L 301
+S +A G G+ IH+ +K + + SLI YSKCG++E +L F + ++ +
Sbjct: 236 ISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNI 295
Query: 302 GHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSHKGLVDEGNKCFD 360
W ++I G +G ++A+ +F +M + ++P+ +T +GVL AC+H GL+ EG F+
Sbjct: 296 VSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFN 355
Query: 361 MMINEYKI--VPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+N+Y + +EHY C+VD+L R+G ++A+ +I+SMP+ P W +LL + H
Sbjct: 356 KAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHS 415
Query: 419 NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
N + + AA ++E DP Y +LSN Y+A W VS +R MKE G+ + GCS +
Sbjct: 416 NKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 475
Query: 479 EHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLK 512
E R ++ F+ DK++ +Y L +S+ L+
Sbjct: 476 EVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 261/501 (52%), Gaps = 34/501 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE- 59
+H+ T+ ++I SC + +A+ L ++M + +P + ++ C+R+ + +
Sbjct: 109 LHRDTVSYCSIINSC-CQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 60 GKQIHGYVLKIGFGFDKFVQSS------LVNMYAKWGEMGLARKVFDKMVDRDVVSWNSL 113
+ H VL D+ +Q S LV+MY K+ + A VFD+M ++ VSW ++
Sbjct: 168 ARMFHALVL-----VDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 114 IDGYARNGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK 167
I G N N E+ + LF M P+R LL L C ++ + ++
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNR-----VTLLSVLPACVELNYGSSLVKEIHGF 277
Query: 168 S--------SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
S A + Y + G ++L+R LF R+++ W+SMISGY G E
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEV 337
Query: 220 MELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM 279
M L + KEG+ + VT+L+ +SA + +L +HS ++K F +LG +LI+M
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 280 YSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
Y+KCGS+ +A VF + K L W+++I G+HG +ALE+F M + G + + F
Sbjct: 398 YAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAF 457
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+ +L+AC+H GLV+E F +Y + T+EHY C +++L R G + A + +MP
Sbjct: 458 LAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMP 516
Query: 400 MRPNKVIWMSLLSSSRNHGNLEI-GEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
M+P+ IW SLLS+ HG L++ G+ A+ L++++PD Y LLS I+ +G +
Sbjct: 517 MKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAE 576
Query: 459 HVREMMKERGVLKDAGCSIVE 479
VR +M+ R + K G S +E
Sbjct: 577 EVRRVMQRRKLNKCYGFSKIE 597
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 215/418 (51%), Gaps = 19/418 (4%)
Query: 17 VHNHRSNDALLLFRQMLHHDLLPDGFT--LPCVIKGCS-RLHAVQEGKQIHGYVLKIGFG 73
V + ++AL L++ +H L +GFT LP VIK C+ + G Q+H LK G
Sbjct: 21 VSDQFYDEALRLYKLKIH-SLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGAD 79
Query: 74 FDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM 133
D V +SL++MYAK+ RKVFD+M+ RD VS+ S+I+ ++G + AMKL EM
Sbjct: 80 CDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM 139
Query: 134 PSRDAFTWTALLDG-LAKCGKVEAAREV---------FDQMPKKSSVSWNAMINGYMKSG 183
+ L+ LA C ++ ++ +V D+ ++S + A+++ Y+K
Sbjct: 140 YFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 184 KINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALS 243
A +F QM +N +SW +MISG N + ++LF + +E L P+ VT+LS L
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 244 AVSGLAVLGNG--RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL 301
A L G+ + IH F +H D L + + MY +CG++ + +F+ + +
Sbjct: 260 ACVELN-YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
W+++I G G + + L +MR+ G++ +++T + +++AC++ L+ +
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
++ + + + L+D+ + G L A+ + + + + V W S++++ HG+
Sbjct: 379 IL-KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGH 434
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 259/492 (52%), Gaps = 36/492 (7%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M P ++SWN ++S YV + R + + LF ++ D+ P+ F+ + C+RLH G
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
IH ++K+G E G +VV N LID Y +
Sbjct: 176 ACIHSKLVKLGL------------------EKG------------NVVVGNCLIDMYGKC 205
Query: 121 GNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYM 180
G ++ A+ +F M +D +W A++ ++ GK+E F QMP +V++N +I+ ++
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 181 KSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
KSG N A Q+ MP N SWN++++GY + + EA E F + G+ ++
Sbjct: 266 KSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSI 325
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKK 300
L+AV+ LAV+ G IH+ K D V+ ++LI+MYSKCG ++ A +F + K
Sbjct: 326 VLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKN 385
Query: 301 LGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDEGN-KC 358
L W +I G +G + +A++LF ++++ +KP TF+ +L CSH + E
Sbjct: 386 LIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGY 445
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
F+MMINEY+I P+VEH L+ + + G + QAK +I+ + V W +LL +
Sbjct: 446 FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARK 505
Query: 419 NLEIGEYAAHNLIE---ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGC 475
+L+ + A +IE AD D Y ++SN+YA +W +V +R++M+E GVLK+ G
Sbjct: 506 DLKAAKTVAAKMIELGDADKDEY-LYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGS 564
Query: 476 SIVEHRGKLNRF 487
S ++ R K + +
Sbjct: 565 SWIDSRTKCSSY 576
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 109 SWNSLIDGYARNGNVEV---AMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP 165
SW++++ AR G++ V A++L ++ DA LL G V R++ +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 166 KKSSVS----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAME 221
K VS N+++ Y S + A ++F +MP ++ISWNS++SGY +GRF E +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 222 LFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL-DGVLGTSLIEMY 280
LF L + + P+ + +AL+A + L + G IHS +VK + + V+G LI+MY
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 281 SKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
KCG ++ A+ VF+ + K W AI+
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVA------------------------------- 231
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
+CS G ++ G F M N P Y L+D ++G A ++ MP
Sbjct: 232 ----SCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKSGDFNNAFQVLSDMP- 281
Query: 401 RPNKVIWMSLLSSSRN 416
PN W ++L+ N
Sbjct: 282 NPNSSSWNTILTGYVN 297
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 241/468 (51%), Gaps = 41/468 (8%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P+ VSWN+I+ Y+ +++A+++F +ML ++ P T+ V+ CSR A++ GK I
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H +K+ D V +S+ +MY K + AR+VFD+ +D+ SW S + GYA +G
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 124 EVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK------SSVSW----- 172
A +LFD MP R+ +W A+L G + + A + M ++ ++ W
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 173 ----------------------------NAMINGYMKSGKINLARQLFGQMPG-RNLISW 203
NA+++ Y K G + A F QM R+ +SW
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
N++++G GR +A+ FE + E PS T+ + L+ + + L G+ IH F+++
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALEL 323
+ +D V+ ++++MYSKC + A+ VFK A + L W +II G +G + + EL
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 324 FMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILC 383
FM + G+KP +TF+G+L AC +G V+ G + F M +Y I P VEHY C++++ C
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 384 RAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLI 431
+ G L Q + + MP P + + + + + ++G +AA L+
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 236/489 (48%), Gaps = 74/489 (15%)
Query: 8 SWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
SWN +I+ N S++ +FR+M + + V+K C + ++ +Q+H V
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAM 127
+K G+ + +++S+V++Y K M AR+VFD++V+ VSWN ++ Y G + A+
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 128 KLFDEM------P------------SR---------------------DAFTWTALLDGL 148
+F +M P SR D T++ D
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Query: 149 AKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMIS 208
KC ++E+AR VFDQ K SW + ++GY SG AR+LF MP RN++SWN+M+
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLG 368
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL 268
GY + EA++ ++ +E +VT++ L+ SG++ + G+ H F+ +H +D
Sbjct: 369 GYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDT 428
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIAN-KKLGHWTAIIVGLGMHGLADQALELFMEM 327
+ ++ +L++MY KCG+++SA F+ ++ + W A++ G+ G ++QAL F M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 328 RRIGMKPHAITFIGVLNACS-----------HKGLVDEGNK-----------------CF 359
++ KP T +L C+ H L+ +G K CF
Sbjct: 489 -QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 360 DMMINEYKIVPTVE--HYGCLVDILCRAGHLQQAKN---IIESMPMRPNKVIWMSLLSSS 414
D I +K T + + ++ CR G ++ ++E+ ++P+ V ++ +L +
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 415 RNHGNLEIG 423
G++E+G
Sbjct: 608 IREGHVELG 616
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN ++ YVH H ++AL M D TL ++ CS + VQ G
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD-RDVVSWNSLIDGYAR 119
KQ HG++ + G+ + V ++L++MY K G + A F +M + RD VSWN+L+ G AR
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 120 NGNVEVAMKLFDEM-----PSRDAFTWTALLDGLAKCGKVEAAREVFDQM----PKKSSV 170
G E A+ F+ M PS+ +T LL G A + + + + K V
Sbjct: 475 VGRSEQALSFFEGMQVEAKPSK--YTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
AM++ Y K + A ++F + R+LI WNS+I G NGR E ELF +L EG
Sbjct: 533 IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEG 592
Query: 231 LMPSHVTILSALSAV--SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
+ P HVT L L A G LG ++ S K+ +IE+Y K G +
Sbjct: 593 VKPDHVTFLGILQACIREGHVELG-FQYFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 194/441 (43%), Gaps = 45/441 (10%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD 106
+ + CS V + +++ +++ F+ + + Y K G + AR++F++M +RD
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAF--TWTALLDGLAKCGKVEAAREVFDQM 164
SWN++I A+NG + ++F M +RD T T+ L CG + R + Q+
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRM-NRDGVRATETSFAGVLKSCGLILDLR-LLRQL 184
Query: 165 ---PKKSSVSWN-----AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRF 216
K S N ++++ Y K ++ AR++F ++ + +SWN ++ Y G
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 217 LEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSL 276
EA+ +F +L+ + P + T+ S + A S L G+ IH+ VK D V+ TS+
Sbjct: 245 DEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSV 304
Query: 277 IEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELF--MEMRRI---- 330
+MY KC +ESA VF +K L WT+ + G M GL +A ELF M R I
Sbjct: 305 FDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWN 364
Query: 331 ---GMKPHA----------------------ITFIGVLNACSHKGLVDEGNKCFDMMINE 365
G HA +T + +LN CS V G + I
Sbjct: 365 AMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHG-FIYR 423
Query: 366 YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG-E 424
+ V L+D+ + G LQ A M ++V W +LL+ G E
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 425 YAAHNLIEADPDATGCYTLLS 445
+ +EA P TLL+
Sbjct: 484 FFEGMQVEAKPSKYTLATLLA 504
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 12/352 (3%)
Query: 121 GNVEVAMKLFDEMPSRDAF-TWTALLDGLAKCGKVEAAREVFDQM----PKKSSVSWNAM 175
GNV A+ + P ++ + L + V AR+V + P N
Sbjct: 43 GNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRA 102
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
I Y K G ++ AR+LF +MP R+ SWN++I+ NG E +F + ++G+ +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
+ L + + L R +H +VK+ + + L TS++++Y KC + A VF
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
I N W I+ G D+A+ +F +M + ++P T V+ ACS + L E
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS-RSLALEV 281
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSR 415
K + + +V + D+ + L+ A+ + + + K W S +S
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS-WTSAMSGYA 340
Query: 416 NHGNLEIGEYAAHNLIEADPDAT-GCYTLLSNIYAAAGKWDKVSHVREMMKE 466
G A L + P+ + + Y A +WD+ +M++
Sbjct: 341 MSGLTR----EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 211/397 (53%), Gaps = 44/397 (11%)
Query: 48 IKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDV 107
++ CS + KQIH ++K D+ + L+++ + +GE A VF+++
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 108 VSWNSLIDGYARNGNVEVAMKLFDEM-----PSRDAFTW--------------------- 141
+WN +I + N A+ LF M D FT+
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 142 --------------TALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINL 187
L+D KCGK ++ R+VFD+MP +S VSW M+ G + + +++
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
A +F QMP RN++SW +MI+ Y N R EA +LF + + + P+ TI++ L A +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
L L GRW+H + K+ F LD LGT+LI+MYSKCGS++ A VF + K L W ++
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 308 IVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
I LG+HG ++AL LF EM ++P AITF+GVL+AC++ G V +G + F MI Y
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
I P EH C++ +L +A +++A N++ESM P+
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 169/338 (50%), Gaps = 50/338 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLF-RQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
+ P+ +WNL+I NH+ +ALLLF M+ H D FT P VIK C +++
Sbjct: 78 LQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRL 137
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G Q+HG +K GF D F Q++L+++Y K G+ RKVFDKM R +VSW +++ G
Sbjct: 138 GTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSV--- 170
N ++ A +F++MP R+ +WTA++ K + + A ++F +M P + ++
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 171 -------------SW-----------------NAMINGYMKSGKINLARQLFGQMPGRNL 200
W A+I+ Y K G + AR++F M G++L
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 201 ISWNSMISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+WNSMI+ ++G EA+ LFE + +E + P +T + LSA + + +G +
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKC--GSIESALAVFKA 295
M++ V G S I ++ C +E AL V KA
Sbjct: 378 RMIQ-------VYGISPIREHNACMIQLLEQALEVEKA 408
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 257/504 (50%), Gaps = 39/504 (7%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMG----LARKVFDKM 102
+I R + V++ K H + G + + S L+ + + A +FD +
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLF-------DEMPSRDAFTWTALLDGLAKCGKVE 155
+ ++++I +R+ + ++ F +E + T+ L+ K
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 156 AAREVFDQMPKKSSVSWNAMINGYMKSGKINL---------ARQLFGQMPGRNLISWNSM 206
+++ + K + +G++++G + + AR++F ++P +++ W+ +
Sbjct: 134 VGKQIHCWVVKNGVF----LSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVL 189
Query: 207 ISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK-HC 265
++GY G E +E+F+ +L G+ P ++ +AL+A + + L G+WIH F+ K
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW 249
Query: 266 FDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFM 325
+ D +GT+L++MY+KCG IE+A+ VF+ + + + W A+I G +G A +A
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 326 EMRR-IGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
+ R G+KP ++ +GVL AC+H G ++EG + M Y I P EHY C+VD++CR
Sbjct: 310 RIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCR 369
Query: 385 AGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD----PDATGC 440
AG L A ++IE MPM+P +W +LL+ R H N+E+GE A NL++ + +
Sbjct: 370 AGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAA 429
Query: 441 YTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAI 500
LSNIY + + + VR M+++RG+ K G S++E G + +F+ GD SHP I
Sbjct: 430 LVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQI 489
Query: 501 YAKLREMSKKLKLAGHVPDTSQVL 524
+ + +S D SQ+L
Sbjct: 490 HTLIHLLS---------VDASQIL 504
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 121/219 (55%), Gaps = 12/219 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V W+++++ YV ++ L +F++ML + PD F++ + C+++ A+ +GK
Sbjct: 180 QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKW 239
Query: 63 IHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
IH +V K + D FV ++LV+MYAK G + A +VF+K+ R+V SW +LI GYA G
Sbjct: 240 IHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYG 299
Query: 122 NVEVAMKLFDEMPSRDAFT--WTALLDGLAKC---GKVEAAREVFDQMPKKSSVS----- 171
+ A D + D LL LA C G +E R + + M + ++
Sbjct: 300 YAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEH 359
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLIS-WNSMISG 209
++ +++ ++G+++ A L +MP + L S W ++++G
Sbjct: 360 YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 191/341 (56%)
Query: 179 YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTI 238
Y SG + A LF + R+LI WN+MISGY G E + ++ + + ++P T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
S A S L L +G+ H+ M+K C + ++ ++L++MY KC S VF ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKC 358
+ + WT++I G G HG + L+ F +M+ G +P+ +TF+ VL AC+H GLVD+G +
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 359 FDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
F M +Y I P +HY +VD L RAG LQ+A + P + + +W SLL + R HG
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 419 NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
N+++ E AA +E DP G Y + +N YA+ G + S VR M+ GV KD G S +
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Query: 479 EHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPD 519
E +G+++RF+ D SH ++ IY K+ EM+ + PD
Sbjct: 453 ELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 153/299 (51%), Gaps = 15/299 (5%)
Query: 43 TLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM 102
T +++ C + +GK+IH + +GF +++++ L+ +YA G++ A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 103 VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR 158
RD++ WN++I GY + G + + ++ +M D +T+ ++ + ++E +
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 159 EVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
M K+ + + +A+++ Y K + ++F Q+ RN+I+W S+ISGY +G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL--DGVL 272
+ E ++ FE + +EG P+ VT L L+A + ++ G W H + +K + + +G
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQH 348
Query: 273 GTSLIEMYSKCGSIESALA-VFKAIANKKLGHWTAIIVGLGMHG---LADQALELFMEM 327
++++ + G ++ A V K+ + W +++ +HG L + A F+E+
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L+ WN +IS YV + L ++ M + ++PD +T V + CS L ++ GK+ H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++K + V S+LV+MY K +VFD++ R+V++W SLI GY +G V
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 126 AMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMI 176
+K F++M + T+ +L G V+ E F M + + + AM+
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 177 NGYMKSGKINLARQLFGQMPGRNLIS-WNSMISGYQLNG 214
+ ++G++ A + + P + W S++ +++G
Sbjct: 354 DTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWI 257
R + + G + GR EA+ L L GL T L G+ I
Sbjct: 74 RKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRI 130
Query: 258 HSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLA 317
H+ M F L+ L L+ +Y+ G +++A +F+++ + L W A+I G GL
Sbjct: 131 HAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLE 190
Query: 318 DQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGC 377
+ L ++ +MR+ + P TF V ACS ++ G + +MI I +
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC-IKSNIIVDSA 249
Query: 378 LVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
LVD+ + + + + R N + W SL+S HG +
Sbjct: 250 LVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKV 291
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+++W +IS Y ++ + ++ L F +M P+ T V+ C+ V +G + H
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HF 333
Query: 66 YVLKIGFGFDKFVQ--SSLVNMYAKWGEMGLARK-VFDKMVDRDVVSWNSLIDGYARNGN 122
Y +K +G + Q +++V+ + G + A + V W SL+ +GN
Sbjct: 334 YSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Query: 123 V---EVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM--------PKKSSVS 171
V E+A F E+ + + +G A CG EAA +V +M P S +
Sbjct: 394 VKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIE 453
Query: 172 WNAMINGYMK 181
++ +MK
Sbjct: 454 LQGEVHRFMK 463
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 188/327 (57%), Gaps = 12/327 (3%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+++ Y G ++ ARQ+F + P + N++ W +MIS Y N +EA+ELF+ + E +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC--FDLDGVLGTSLIEMYSKCGSIESA 289
V + ALSA + L + G I+S +K +D L SL+ MY K G E A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG------MKPHAITFIGVL 343
+F K + +T++I G ++G A ++LELF +M+ I + P+ +TFIGVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
ACSH GLV+EG + F MI +Y + P H+GC+VD+ CR+GHL+ A I MP++PN
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 404 KVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREM 463
VIW +LL + HGN+E+GE + E D D G Y LSNIYA+ G WD+ S +R+
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 464 MKERGVLKDAGCSIVEHRGKLNRFIVG 490
+++R + G S +E +N F+ G
Sbjct: 404 VRKRRM---PGKSWIELGSIINEFVSG 427
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 29/383 (7%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQ-E 59
H +L S N + Y+ + ALL FR D F++ IK S A +
Sbjct: 25 HTKSLKS-NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD 83
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-DVVSWNSLIDGYA 118
G+QIH V K+GF +Q+SLV Y+ G++ AR+VFD+ ++ ++V W ++I Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----- 169
N N A++LF M + D T L A G V+ E++ + K+
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 170 -VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVL-- 226
N+++N Y+KSG+ AR+LF + +++ ++ SMI GY LNG+ E++ELF+ +
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 227 ----LKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSFMVKHCFDLDGVLGTSLIEMYS 281
+ P+ VT + L A S ++ G R S ++ + +++++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 282 KCGSIESALAVFKAIANK-KLGHWTAIIVGLGMHG---LADQALELFMEMRRIGMKPHAI 337
+ G ++ A + K W ++ +HG L ++ E+ R H
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDR----DHVG 379
Query: 338 TFIGVLNACSHKGLVDEGNKCFD 360
++ + N + KG+ DE +K D
Sbjct: 380 DYVALSNIYASKGMWDEKSKMRD 402
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 194/346 (56%), Gaps = 5/346 (1%)
Query: 138 AFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPG 197
+ TAL+ G + A +VFD+MP+++ V+WN MI G G A +MP
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 198 RNLISWNSMISGYQLNGRFLEAMELFEVLLK-EGLMPSHVTILSALSAVSGLAVLGNGRW 256
R ++SW ++I GY + EA+ LF ++ + + P+ +TIL+ L AV L L
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 257 IHSFMVKHCF-DLDGVLGTSLIEMYSKCGSIESALAVFKAIAN--KKLGHWTAIIVGLGM 313
+H+++ K F D + SLI+ Y+KCG I+SA F I N K L WT +I +
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN-KCFDMMINEYKIVPTV 372
HG+ +A+ +F +M R+G+KP+ +T I VLNACSH GL +E + F+ M+NEYKI P V
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 373 EHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE 432
+HYGCLVD+L R G L++A+ I +P+ V+W LL + + + E+ E L+E
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Query: 433 ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
+ G Y L+SNI+ G++ R+ M RGV K G S V
Sbjct: 458 LERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 60/384 (15%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQML-------HHDLLP--DGFTLPCVIKGCS--RL 54
L +N ++ CY A L+ Q+ H+ LP D FT ++K S R
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 55 HAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLI 114
++ G +HG LK+GF +VQ++LV MY G M A KVFD+M +R+ V+WN +I
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 115 DGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM-------PKK 167
G G+ E A+ ++MP+R +WT ++DG A+ K + A +F +M P +
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 168 SSV------SW----------------------------NAMINGYMKSGKINLARQLFG 193
++ W N++I+ Y K G I A + F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 194 QMPG--RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS--GLA 249
++P +NL+SW +MIS + ++G EA+ +F+ + + GL P+ VT++S L+A S GLA
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA-NKKLGHWTAII 308
+ ++ + ++ D L++M + G +E A + I +K W ++
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 309 VGLGMHG---LADQALELFMEMRR 329
++ LA++ ME+ R
Sbjct: 437 GACSVYDDAELAERVTRKLMELER 460
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQE 59
M T+VSW II Y + +A+LLF +M+ D + P+ T+ ++ L ++
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 60 GKQIHGYVLKIGF-GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD--RDVVSWNSLIDG 116
+H YV K GF D V +SL++ YAK G + A K F ++ + +++VSW ++I
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 117 YARNGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAA-REVFDQMPKKSS 169
+A +G + A+ +F +M P+R T ++L+ + G E E F+ M +
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNR--VTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 170 VS-----WNAMINGYMKSGKINLARQLFGQMP 196
++ + +++ + G++ A ++ ++P
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIP 424
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 182/301 (60%), Gaps = 2/301 (0%)
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+ I Y K+G+ AR++F + P R L SWN++I G GR EA+E+F + + GL
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHS--FMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P T++S ++ GL L +H K D ++ SLI+MY KCG ++ A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+F+ + + + W+++IVG +G +ALE F +MR G++P+ ITF+GVL+AC H G
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
LV+EG F MM +E+++ P + HYGC+VD+L R G L++AK ++E MPM+PN ++W L
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
+ G++E+ E+ A ++E +P G Y +L+N+YA G W V VR++MK + V
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVA 455
Query: 471 K 471
K
Sbjct: 456 K 456
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 166/308 (53%), Gaps = 13/308 (4%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P WN I+ Y+ + DA+ ++ M+ +LPD ++LP VIK ++H GK++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
H +++GF D+F +S + +Y K GE ARKVFD+ +R + SWN++I G G
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 124 EVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFD-----QMPKKSSV-SWN 173
A+++F +M D FT ++ G + A ++ + +KS + N
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
++I+ Y K G+++LA +F +M RN++SW+SMI GY NG LEA+E F + + G+ P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG--TSLIEMYSKCGSIESALA 291
+ +T + LSA ++ G+ + M+K F+L+ L ++++ S+ G ++ A
Sbjct: 320 NKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 292 VFKAIANK 299
V + + K
Sbjct: 379 VVEEMPMK 386
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
WN+++ Y + L+A++++ +++ ++P ++ + A + G+ +HS V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 263 KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
+ F D + I +Y K G E+A VF +KLG W AII GL G A++A+E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 323 LFMEMRRIGMKPHAITFIGVLNACSHKG---LVDEGNKCFDMMINEYKIVPTVEHYGCLV 379
+F++M+R G++P T + V +C G L + +KC E K + L+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK--SDIMMLNSLI 262
Query: 380 DILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
D+ + G + A +I E M R N V W S++ +GN
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQR-NVVSWSSMIVGYAANGN 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSW+ +I Y N + +AL FRQM + P+ T V+ C V+EG
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 61 KQIHGYVLKIGFGFDKFVQ--SSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGY 117
K ++K F + + +V++ ++ G++ A+KV ++M + +V+ W L+ G
Sbjct: 341 KTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 118 ARNGNVEVA 126
+ G+VE+A
Sbjct: 400 EKFGDVEMA 408
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 196/332 (59%), Gaps = 3/332 (0%)
Query: 151 CGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY 210
CG ++ A+++F ++PK+ VSWN++I G +++G + A +LF +MP +N+ISWN MIS Y
Sbjct: 166 CGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAY 225
Query: 211 QLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG 270
++ LF +++ G + T++ L+A A L GR +H+ +++ +
Sbjct: 226 LGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSV 285
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
V+ T+LI+MY KC + A +F +++ + W +I+ +HG + LELF M
Sbjct: 286 VIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMING 345
Query: 331 GMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQ 390
++P +TF+GVL C+ GLV +G + +M++E++I P H C+ ++ AG ++
Sbjct: 346 MLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEE 405
Query: 391 AKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNI 447
A+ ++++P + P W +LLSSSR GN +GE A +LIE DP Y LL NI
Sbjct: 406 AEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNI 465
Query: 448 YAAAGKWDKVSHVREMMKERGVLKDAGCSIVE 479
Y+ G+W+ V+ VREM+KER + + GC +V+
Sbjct: 466 YSVTGRWEDVNRVREMVKERKIGRIPGCGLVD 497
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N + Y+ + AL + +L +PD +T +I + V GK HG +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKL 129
G VQ+SL++MY G + LA+K+F ++ RD+VSWNS+I G RNG+V A KL
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 130 FDEMPSRDAFTWTA-----------------------------------LLDGLAKCGKV 154
FDEMP ++ +W LL+ + ++
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 155 EAAREVFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY 210
+ R V + + S V A+I+ Y K ++ LAR++F + RN ++WN MI +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 211 QLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG 270
L+GR +ELFE ++ L P VT + L + ++ G+ +S MV F +
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE-FQIKP 385
Query: 271 VLGTS--LIEMYSKCGSIESALAVFKAIANKKL 301
G + +YS G E A K + ++ +
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 13/227 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M ++SWN++IS Y+ + ++ LFR+M+ + TL ++ C R ++EG
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H +++ + ++L++MY K E+GLAR++FD + R+ V+WN +I + +
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 121 GNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN--- 173
G E ++LF+ M + D T+ +L G A+ G V + + M + + N
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 174 --AMINGYMKSGKINLARQLFGQMPGRNLIS----WNSMISGYQLNG 214
M N Y +G A + +P ++ W +++S + G
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
N + Y ++ +A+ + +L+ G +P T +S +S + + +G+ H +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 264 HCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVG-------LGMHGL 316
H D + SL+ MY+ CG+++ A +F I + + W +II G L H L
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 317 ADQ------------------------ALELFMEMRRIGMKPHAITFIGVLNACSHKGLV 352
D+ ++ LF EM R G + + T + +LNAC +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 353 DEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLS 412
EG +I + + +V L+D+ + + A+ I +S+ +R NKV W ++
Sbjct: 267 KEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMIL 324
Query: 413 S----SRNHGNLEIGEYAAHNLIEAD 434
+ R G LE+ E + ++ D
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPD 350
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 258/497 (51%), Gaps = 14/497 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + +VSWN +IS V + +F M ++ P FT + S + V+ G
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL---ASLVTCVRHG 152
Query: 61 KQIHGYVLKIGFG-FDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+QIHG + G ++ V +S+++MY + G A VF M DRDVVSWN LI +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 120 NGNVEVAMKLF---DEMPSR-DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+GN EVA+ F EM + D +T + ++ + ++ ++ K +S+
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
A I+ + K +++ + +LF ++ + + NSMI Y + +A+ LF + + + +
Sbjct: 273 LGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSV 332
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P T S LS+++ + +L +G +HS ++K FDLD + TSL+EMY K GS++ A+
Sbjct: 333 RPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMG 391
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM-RRIGMKPHAITFIGVLNACSHKG 350
VF K L W +I+GL + A ++L +F ++ +KP +T +G+L AC + G
Sbjct: 392 VFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAG 451
Query: 351 LVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSL 410
V+EG + F M + + P EHY C++++LCR G + +AK+I + +P P+ IW +
Sbjct: 452 FVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPI 511
Query: 411 LSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL 470
L +S + G+ + E A ++E++P ++ Y +L IY +W+ +R M E +
Sbjct: 512 LCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLK 571
Query: 471 KDAGCSIVEHRGKLNRF 487
G S + + F
Sbjct: 572 SAQGSSKISIESSVFSF 588
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 37/323 (11%)
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
K +H +L+ GF + + + +Y K G + A ++FD + D++ ++WN + G +
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVS-- 171
NG + A+ LFDEMP RD +W ++ GL CG E VF M P + + S
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 172 -----------------------------WNAMINGYMKSGKINLARQLFGQMPGRNLIS 202
WN++++ Y + G + A +F M R+++S
Sbjct: 143 ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV 262
WN +I +G A++ F ++ + + P T+ +S S L L G+ + +
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 263 KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALE 322
K F + ++ + I+M+SKC ++ ++ +F+ + ++I H + AL
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALR 322
Query: 323 LFMEMRRIGMKPHAITFIGVLNA 345
LF+ ++P TF VL++
Sbjct: 323 LFILAMTQSVRPDKFTFSSVLSS 345
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 282/586 (48%), Gaps = 81/586 (13%)
Query: 6 LVSWNLIISCYVHNHR-SNDALLLFRQM---LHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
L+++N ++S + ++A+ +F +M D+ D FT+ ++K ++L V G+
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFD----KMVD------------- 104
Q+HG ++K G KF SSL++MY+K G+ +F+ + VD
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 105 -----------------RDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTA 143
D +SWN+LI GYA+NG E A+K+ M D ++ A
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 144 LLDGLAKCGKVEAAREVFDQMPKKSSVS-------------------------------- 171
+L+ L+ ++ +EV ++ K S S
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 172 ---WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA-MELFEVLL 227
++MI GY GK+ A++LF + +NL+ W +M GY LN R ++ +EL +
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY-LNLRQPDSVLELARAFI 384
Query: 228 -KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
E P + ++S L A S A + G+ IH ++ +D L T+ ++MYSKCG++
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
E A +F + + + A+I G HG ++ + F +M G KP ITF+ +L+AC
Sbjct: 445 EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM-PMRPNKV 405
H+GLV EG K F MI Y I P HY C++D+ +A L +A ++E + + + V
Sbjct: 505 RHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAV 564
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
I + L++ + N E+ + L+ + Y ++N YA++G+WD++ +R M+
Sbjct: 565 ILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR 624
Query: 466 ERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKL 511
+ + +GCS + + F D SH +T+AIYA L ++K L
Sbjct: 625 GKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 36/346 (10%)
Query: 54 LHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSL 113
+ +++G H +K G + LVN+Y+K G + AR VFD+M++R+V SWN++
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 114 IDGYARNGNVEVAMKLFD-EMPSRDAFTWTALLDGLAKCGKVEA-AREVFDQMPKKSSVS 171
I Y + NV+ A +LF+ + RD T+ LL G AK E+ A E+F +M +K
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKD- 119
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+ I+ + + + L+ +L ++ G QL+G VL+K G
Sbjct: 120 -DIWIDDFTVTTMVKLSAKL------------TNVFYGEQLHG----------VLVKTG- 155
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESAL 290
+ T + S + + G + + + C + +D V ++I Y + G I+ AL
Sbjct: 156 --NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKAL 213
Query: 291 AVFKAIANKKLGH---WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
+VF N +L W +I G +G ++AL++ + M G+K +F VLN S
Sbjct: 214 SVF--WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
+ G + ++ G +VD+ C+ G+++ A++
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYCKCGNMKYAES 316
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 13/224 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQE 59
+ + LV W + Y++ + + L L R + ++ PD + V+ CS ++
Sbjct: 352 LSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP 411
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
GK+IHG+ L+ G DK + ++ V+MY+K G + A ++FD +RD V +N++I G A
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAH 471
Query: 120 NGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
+G+ + + F++M D T+ ALL G V + F M + ++S
Sbjct: 472 HGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETG 531
Query: 172 -WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNG 214
+ MI+ Y K+ +++ A +L M G + + +++I G LN
Sbjct: 532 HYTCMIDLYGKAYRLDKAIEL---MEGIDQVEKDAVILGAFLNA 572
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 192/343 (55%), Gaps = 4/343 (1%)
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMP 196
+ F ALLD KC V AR++FD++P++++V WNAMI+ Y GK+ A +L+ M
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 197 -GRNLISWNSMISGY--QLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
N S+N++I G +G + A+E + +++ P+ +T+L+ +SA S +
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRL 200
Query: 254 GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGM 313
+ IHS+ ++ + L + L+E Y +CGSI VF ++ ++ + W+++I +
Sbjct: 201 IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYAL 260
Query: 314 HGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE 373
HG A+ AL+ F EM + P I F+ VL ACSH GL DE F M +Y + + +
Sbjct: 261 HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD 320
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
HY CLVD+L R G ++A +I++MP +P W +LL + RN+G +E+ E AA L+
Sbjct: 321 HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMV 380
Query: 434 DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCS 476
+P+ Y LL IY + G+ ++ +R MKE GV G S
Sbjct: 381 EPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 149/348 (42%), Gaps = 46/348 (13%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLP-DGFTLPCVIKGCSRLHAVQEGKQIH 64
L+S +S Y + AL LF QM LP D +K C+ G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVE 124
+ +K F + FV +L++MY K + ARK+FD++ R+ V WN++I Y G V+
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 125 VAMKLF---DEMPSRDAF----------------------------------TWTALLDG 147
A++L+ D MP+ +F T AL+
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 148 LAKCGKVEAAREV----FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISW 203
+ G +E+ F + + + ++ Y + G I + +F M R++++W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 204 NSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK 263
+S+IS Y L+G A++ F+ + + P + L+ L A S A L + ++ ++
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH-AGLADEALVYFKRMQ 310
Query: 264 HCFDLDGVLG--TSLIEMYSKCGSIESALAVFKAIANKKLGH-WTAII 308
+ L + L+++ S+ G E A V +A+ K W A++
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 226/411 (54%), Gaps = 11/411 (2%)
Query: 78 VQSSLVNMYAKWGEM-GLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM--- 133
+ S LV Y+K + + VF M R++ SWN +I ++R+G ++ LF M
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 134 --PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGKINL 187
D FT +L + + ++ + K S +A++ Y+ GK+
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 188 ARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSG 247
AR+LF MP R+ + + +M GY G + + +F + G V ++S L A
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAI 307
L L +G+ +H + ++ C L LG ++ +MY KC ++ A VF ++ + + W+++
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 308 IVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK 367
I+G G+ G + +LF EM + G++P+A+TF+GVL+AC+H GLV++ F +M EY
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYN 366
Query: 368 IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAA 427
IVP ++HY + D + RAG L++A+ +E MP++P++ + ++LS + +GN+E+GE A
Sbjct: 367 IVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVA 426
Query: 428 HNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIV 478
LI+ P Y L+ +Y+AAG++D+ +R+ MKE+ + K GCS +
Sbjct: 427 RELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 49/409 (11%)
Query: 2 HKP--TLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQ 58
H P + SWN+II + + ++ ++ LF +M + PD FTLP +++ CS +
Sbjct: 92 HMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAK 151
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G IH LK+GF FV S+LV MY G++ ARK+FD M RD V + ++ GY
Sbjct: 152 SGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV 211
Query: 119 RNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV---- 170
+ G + + +F EM + D+ +LL + G ++ + V ++ S
Sbjct: 212 QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN 271
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
NA+ + Y+K ++ A +F M R++ISW+S+I GY L+G + + +LF+ +LKEG
Sbjct: 272 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 331
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ P+ VT L LSA + H +V+ + L L++ Y+
Sbjct: 332 IEPNAVTFLGVLSACA-----------HGGLVEKSW-----LYFRLMQEYNIV------- 368
Query: 291 AVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKG 350
+L H+ ++ + GL ++A E F+E + +KP VL+ C G
Sbjct: 369 --------PELKHYASVADCMSRAGLLEEA-EKFLE--DMPVKPDEAVMGAVLSGCKVYG 417
Query: 351 LVDEGNKCFDMMINEYKIVP-TVEHYGCLVDILCRAGHLQQAKNIIESM 398
V+ G + +I ++ P +Y L + AG +A+++ + M
Sbjct: 418 NVEVGERVARELI---QLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 217/443 (48%), Gaps = 39/443 (8%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+VSWN II + AL LF M H P+ T V+ S + + G+QIHG
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
++K G + ++L++ YAK G + +R FD + D+++V WN+L+ GYA N + +
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPI 399
Query: 126 AMKLFDEM------PSRDAFT-----------------------------WTALLDGLAK 150
+ LF +M P+ F+ ++L+ AK
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 151 CGKVEAAREVFDQMPKKSSVSWNAMING-YMKSGKINLARQLFGQMPGRNLISWNSMISG 209
+ A + D +SV ++ G Y + G+ + + +L + + +SWN I+
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 210 YQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL- 268
+ E +ELF+ +L+ + P T +S LS S L L G IH + K F
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 579
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMR 328
D + LI+MY KCGSI S + VF+ K L WTA+I LG+HG +ALE F E
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHL 388
+G KP ++FI +L AC H G+V EG F M +Y + P ++HY C VD+L R G+L
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYL 698
Query: 389 QQAKNIIESMPMRPNKVIWMSLL 411
++A+++I MP + +W + L
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFL 721
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 179/350 (51%), Gaps = 14/350 (4%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY 66
VS+N II Y + A +F +M + LP+ T+ ++ C+ L V+ G Q+HG
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLD-VRAGTQLHGL 138
Query: 67 VLKIG-FGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
LK G F D FV + L+ +Y + + +A +VF+ M + + +WN ++ G ++
Sbjct: 139 SLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKE 198
Query: 126 AMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SVSWNAMI 176
M F E+ S ++ +L G++ ++ ++++ KK SV N++I
Sbjct: 199 CMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV-NSLI 257
Query: 177 NGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHV 236
+ Y K G ++A ++F +++SWN++I + L+A++LF + + G P+
Sbjct: 258 SAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQG 317
Query: 237 TILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAI 296
T +S L S + +L GR IH ++K+ + VLG +LI+ Y+KCG++E + F I
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI 377
Query: 297 ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
+K + W A++ G L LF++M ++G +P TF L +C
Sbjct: 378 RDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 15/350 (4%)
Query: 77 FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR 136
+V ++++++Y K GE+ LA KVFD+M +R+ VS+N++I GY++ G+V+ A +F EM
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 137 DAFTWTALLDGLAKCGK--VEAAREVFDQMPKKSSVSWNAMING-----YMKSGKINLAR 189
+ + GL C V A ++ K +A + Y + + +A
Sbjct: 110 GYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 190 QLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
Q+F MP ++L +WN M+S G E M F L++ G + + L L VS +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIV 309
L + +H K D + + SLI Y KCG+ A +F+ + + W AII
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN---EY 366
+AL+LF+ M G P+ T++ VL S L+ G + M+I E
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRN 416
IV L+D + G+L+ ++ + + + N V W +LLS N
Sbjct: 350 GIVLG----NALIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALLSGYAN 394
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 193/458 (42%), Gaps = 46/458 (10%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +L +WN ++S H + + FR+++ + V+KG S + +
Sbjct: 175 MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDIS 234
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
KQ+H K G + V +SL++ Y K G +A ++F D+VSWN++I A++
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 121 GNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSW 172
N A+KLF MP S + T+ ++L + + R++ + K V
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
NA+I+ Y K G + +R F + +N++ WN+++SGY N + LF +L+ G
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFR 413
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF-DLDGVLG------------------ 273
P+ T +AL + + + +HS +V+ + D D VL
Sbjct: 414 PTEYTFSTALKS----CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 274 -------TSLIEM------YSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
TS++ + YS+ G ++ + + W I ++
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVD 380
+ELF M + ++P TF+ +L+ CS + G+ ++ L+D
Sbjct: 530 IELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLID 589
Query: 381 ILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHG 418
+ + G ++ + E + N + W +L+S HG
Sbjct: 590 MYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIHG 626
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ +P VSWN+ I+ + + + LF+ ML ++ PD +T ++ CS+L + G
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG 564
Query: 61 KQIHGYVLKIGFGF-DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
IHG + K F D FV + L++MY K G + KVF++ ++++++W +LI
Sbjct: 565 SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGI 624
Query: 120 NGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---- 171
+G + A++ F E S D ++ ++L G V+ +F +M K V
Sbjct: 625 HGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMD 683
Query: 172 -WNAMINGYMKSGKINLARQLFGQMP-GRNLISWNSMISG 209
+ ++ ++G + A L +MP + W + + G
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 231/443 (52%), Gaps = 18/443 (4%)
Query: 54 LHAVQEGKQIHGYVLKIGFGF-----DKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDV- 107
L++ + KQIH +L K V ++L+ Y GE + +F M+ V
Sbjct: 24 LYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQ 83
Query: 108 ---VSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREV 160
+++ SLI + +V + L + R D F T+ + + G +E++R++
Sbjct: 84 PNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKM 143
Query: 161 FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
FD + V+ N++++ ++G+++ A + F +MP +++SW ++I+G+ G +A+
Sbjct: 144 FDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKAL 203
Query: 221 ELFEVLLKEG---LMPSHVTILSALSAVSGLAVLGN--GRWIHSFMVKHCFDLDGVLGTS 275
+F +++ + P+ T +S LS+ + G G+ IH +++ L LGT+
Sbjct: 204 MVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTA 263
Query: 276 LIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
L++MY K G +E AL +F I +KK+ W AII L +G QALE+F M+ + P+
Sbjct: 264 LLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPN 323
Query: 336 AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII 395
IT + +L AC+ LVD G + F + +EYKI+PT EHYGC+VD++ RAG L A N I
Sbjct: 324 GITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFI 383
Query: 396 ESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWD 455
+S+P P+ + +LL + + H N E+G LI P G Y LS A W
Sbjct: 384 QSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWS 443
Query: 456 KVSHVREMMKERGVLKDAGCSIV 478
+ +R+ M E G+ K S++
Sbjct: 444 EAEKMRKAMIEAGIRKIPAYSVL 466
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 44/282 (15%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
+N +I Y+ +L LF ML + P+ T P +IK +V G +HG L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMK 128
K GF +D FVQ+S V Y + G++ +RK+FD +++ VV+ NSL+D RNG ++ A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 129 LFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM---------PKKSS---------- 169
F MP D +WT +++G +K G A VF +M P +++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 170 -----VSWNAMINGYM--------------------KSGKINLARQLFGQMPGRNLISWN 204
+ I+GY+ K+G + +A +F Q+ + + +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 205 SMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
++IS NGR +A+E+FE++ + P+ +T+L+ L+A +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 248/496 (50%), Gaps = 24/496 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M L NL++ C+ S ++ +M + +G T +I+GCS V EG
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 61 KQIHGYVLKIGFGFDK-FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
KQ+H V+K G+ FV + LV+ Y+ G++ + + F+ + ++DV+SWNS++ A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 120 NGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPK-----KS 168
G+V ++ LF +M PS F + L+ ++ +++ +++ + K S
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFM--SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+A+I+ Y K I + L+ +P NL NS+++ G + +E+F +++
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC------FDLDGVLGTSLIEMYSK 282
EG VT+ + L A+S L +HS + HC + D + SLI+ Y+K
Sbjct: 411 EGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 283 CGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
G E + VF + + T+II G +G+ +++ EM R+ + P +T + V
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSV 526
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRP 402
L+ CSH GLV+EG FD + ++Y I P + Y C+VD+L RAG +++A+ ++
Sbjct: 527 LSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDA 586
Query: 403 NKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+ V W SLL S R H N IG AA L+ +P+ Y +S Y G ++ +RE
Sbjct: 587 DCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Query: 463 MMKERGVLKDAGCSIV 478
+ R ++++ G S V
Sbjct: 647 IAASRELMREIGYSSV 662
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 184/360 (51%), Gaps = 16/360 (4%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +V++NL+IS S A+ L+ +M+ L T P V+ CS +EG
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
Q+H V+ +GFG + FV+S+LV +YA + +A K+FD+M+DR++ N L+ + +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 121 GN----VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSW---- 172
G EV +++ E +++ T+ ++ G + V +++ + K W
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS---GWNISN 248
Query: 173 ----NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
N +++ Y G ++ + + F +P +++ISWNS++S G L++++LF +
Sbjct: 249 IFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIE 287
G PS +S L+ S + + +G+ IH +++K FD+ + + ++LI+MY KC IE
Sbjct: 309 WGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIE 368
Query: 288 SALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
++ +++++ L +++ L G+ +E+F M G +T VL A S
Sbjct: 369 NSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 156/327 (47%), Gaps = 21/327 (6%)
Query: 88 KWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS----RDAFTWTA 143
K G + A + FD+M RDVV++N LI G +R G A++L+ EM S A T+ +
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 144 LLDGLAKCGKVEAAREVFDQMPKKSSVSW-------NAMINGYMKSGKINLARQLFGQMP 196
+ L+ C RE + S+ + +A++ Y +++A +LF +M
Sbjct: 118 V---LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 197 GRNLISWNSMISGYQLNGRFLEAMELFEVLLK---EGLMPSHVTILSALSAVSGLAVLGN 253
RNL N ++ + G E+ LFEV L+ EG+ + +T + S ++
Sbjct: 175 DRNLAVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 254 GRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLG 312
G+ +HS +VK +++ + + L++ YS CG + ++ F A+ K + W +I+
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 313 MHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTV 372
+G +L+LF +M+ G +P F+ LN CS + G + ++ V ++
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 373 EHYGCLVDILCRAGHLQQAKNIIESMP 399
L+D+ + ++ + + +S+P
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 161 FDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAM 220
++ P + N I+ +KSG + A + F +M R+++++N +ISG G L A+
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 221 ELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMY 280
EL+ ++ GL S T S LS S G +H ++ F + + ++L+ +Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 281 SKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
+ ++ AL +F + ++ L ++ G + + E+++ M G+ + +T+
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
++ CSH LV EG + +++ + + LVD G L + ++P
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE 277
Query: 401 RPNKVIWMSLLSSSRNHGNL 420
+ + + W S++S ++G++
Sbjct: 278 K-DVISWNSIVSVCADYGSV 296
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 236/490 (48%), Gaps = 37/490 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVI---KGCSRLHAVQEGKQ 62
LVSWN +IS + N ++ A LF++++ + F+L V+ C ++ GK
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVS-EYSCSKFSLSTVLAILTSCDSSDSLIFGKS 518
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN 122
+H ++ K+G L + + + M R D+ SWNS+I G A +G+
Sbjct: 519 VHCWLQKLG---------DLTSAFLRLETMSETR---------DLTSWNSVISGCASSGH 560
Query: 123 VEVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS-----SVSW 172
+++ F M D T + G V R F + KS +
Sbjct: 561 HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR-CFHGLAIKSLRELDTQLQ 619
Query: 173 NAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
N +I Y + I A ++FG + NL SWN +IS N E +LF L L
Sbjct: 620 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLE 676
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P+ +T + LSA + L G H +++ F + + +L++MYS CG +E+ + V
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 736
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSHKGL 351
F+ + W ++I G HG+ ++A+ELF E+ M+P+ +FI +L+ACSH G
Sbjct: 737 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 796
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+DEG + M ++ + P EH +VD+L RAG L++A I + +W +LL
Sbjct: 797 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 856
Query: 412 SSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
S+ HG+ ++G+ A L E +PD Y L+N Y G W++ +R+M+++ + K
Sbjct: 857 SACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKK 916
Query: 472 DAGCSIVEHR 481
G S+++ R
Sbjct: 917 LPGYSVIDVR 926
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 242/524 (46%), Gaps = 50/524 (9%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
++S N I++ + N +A + QM D + PD T+ + C L +EG+ +H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 65 GYVLKIGFGFDKF-VQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
GY +++ V +S+++MY K G A +F RD+VSWNS+I +++NG
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 124 EVAMKLFDEMPSR---DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMINGYM 180
A LF E+ S F+ + +L L C ++ +F KS W
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSL--IFG----KSVHCW------LQ 524
Query: 181 KSGKINLARQLFGQMP-GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTI 238
K G + A M R+L SWNS+ISG +G LE++ F+ + +EG + +T+
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 239 LSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIAN 298
L +SA L ++ GR H +K +LD L +LI MY +C IESA+ VF I++
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 299 KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKC 358
L W +I L + + +LF R + ++P+ ITF+G+L+A + G G +
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 359 FDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNH 417
+I ++ P V LVD+ G L+ + + + W S++S+ H
Sbjct: 702 HCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFH 758
Query: 418 G----NLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
G +E+ + + N E +P+ + +LLS + + +S+ ++M ++ GV
Sbjct: 759 GMGEKAMELFKELSSN-SEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKP-- 815
Query: 474 GCSIVEHR----------GKLN---RFIVGDKSHPQTKAIYAKL 504
+ EHR GKL FI G PQ ++ L
Sbjct: 816 ---VTEHRVWIVDMLGRAGKLREAYEFITG-IGEPQKAGVWGAL 855
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 230/503 (45%), Gaps = 74/503 (14%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M +VSWN I++ + N +L F+ M D T CVI CS + + G
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 61 KQIHGYVLKIGFGFDKFVQ--SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
+ +HG V+K G+ + V +S+++MY+K G+ A VF+++V RDV+S N++++G+A
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 119 RNGNVEVAMKLFDEMPSRDAFT--WTALLDGLAKCGKVEAARE--------VFDQMPKKS 168
NG E A + ++M S D ++ + CG + +RE V +M ++
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
N++I+ Y K G A LF R+L+SWNSMIS + NG +A LF+ ++
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 229 EGLMP--SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
E S T+L+ L++ L G+ +H ++ K G +
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDL 529
Query: 287 ESALAVFKAIA-NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPH-AITFIGVLN 344
SA + ++ + L W ++I G G ++L F M R G H IT +G ++
Sbjct: 530 TSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTIS 589
Query: 345 ACSHKGLVDEGNKCF----------------DMMINEY----------KIV-----PTVE 373
A + GLV +G +CF + +I Y K+ P +
Sbjct: 590 ASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLI-- 431
+ C++ L + ++ + ++ + PN++ ++ LLS+S G+ G A +LI
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR 708
Query: 432 --EADPDATGCYTLLSNIYAAAG 452
+A+P + L ++Y++ G
Sbjct: 709 GFQANPFVSAA---LVDMYSSCG 728
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 178/370 (48%), Gaps = 14/370 (3%)
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+ +H + LK G D S L+ Y + GE+ + +FD++ ++DV+ WNS+I +N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 121 GNVEVAMKLFDEMPSR-DAFTWTALLDGLAKCGKVEAARE--------VFDQMPKKSSVS 171
G A+ LF EM + + F T LL + + +R+ + + SS+
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
NA++N Y K ++ A +F M R+++SWN++++ NG ++++ F+ + G
Sbjct: 227 -NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG--VLGTSLIEMYSKCGSIESA 289
VT +SA S + L G +H ++K + + +G S+I MYSKCG E+A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG-MKPHAITFIGVLNACSH 348
VF+ + + + AI+ G +G+ ++A + +M+ + ++P T + + + C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 349 KGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWM 408
EG + +E ++D+ + G QA+ + ++ R + V W
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWN 464
Query: 409 SLLSSSRNHG 418
S++S+ +G
Sbjct: 465 SMISAFSQNG 474
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 18/342 (5%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
+ + ++ WN +I+ N R A+ LF +M+H D TL S LH ++
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKC 207
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+H ++ G D + ++L+N+YAK + A VF M RD+VSWN+++ N
Sbjct: 208 SMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAR--EVFDQMPKKSSVS--- 171
G+ +++ F M D T++ + ++ C +E E + KS S
Sbjct: 268 GHPRKSLQYFKSMTGSGQEADTVTFSCV---ISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 172 ----WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
N++I+ Y K G A +F ++ R++IS N++++G+ NG F EA + +
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 228 K-EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV-LGTSLIEMYSKCGS 285
+ + P T++S S L+ GR +H + V+ + + S+I+MY KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
A +FK ++ L W ++I +G +A LF E+
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 12/289 (4%)
Query: 125 VAMKLFDEMPSRDAFTWTA-------LLDGLAKCGKVEAAREVFDQMPK----KSSVSWN 173
+ LFDE+P R+ T + +L + E R V K + + +
Sbjct: 67 IVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSS 126
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
++ Y ++G++ + LF ++ +++I WNSMI+ NGR++ A+ LF ++ +G
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
T+L A SA+S L + +H ++ D L +L+ +Y+K ++ SA VF
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
+ ++ + W I+ +G ++L+ F M G + +TF V++ACS +
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 354 EGNKCFDMMINE-YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
G ++I Y V ++ + + G + A+ + E + R
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 187/328 (57%), Gaps = 16/328 (4%)
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY-----QLNGRFLEAME 221
+S + +++ Y K+G + AR++F +MP R ++WN+MI GY + N +AM
Sbjct: 145 ESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 222 LFEVL--LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCF--DLDGVLGTSLI 277
LF G+ P+ T++ LSA+S +L G +H ++ K F ++D +GT+L+
Sbjct: 205 LFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALV 264
Query: 278 EMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
+MYSKCG + +A +VF+ + K + WT++ GL ++G ++ L M G+KP+ I
Sbjct: 265 DMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEI 324
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
TF +L+A H GLV+EG + F M + + P +EHYGC+VD+L +AG +Q+A I +
Sbjct: 325 TFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILA 384
Query: 398 MPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPD-----ATGC--YTLLSNIYAA 450
MP++P+ ++ SL ++ +G +GE L+E + + + C Y LSN+ A
Sbjct: 385 MPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAH 444
Query: 451 AGKWDKVSHVREMMKERGVLKDAGCSIV 478
GKW +V +R+ MKER + G S V
Sbjct: 445 KGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 70/372 (18%)
Query: 60 GKQIHGYVLKIGFGFD-KFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYA 118
G+ +HG V K+GF ++ + + ++L++ YAK G++ ARKVFD+M +R V+WN++I GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 119 R-----NGNVEVAMKLFDEM--------PSRDAFTWTALLDGLAKCGKVEAAR------E 159
N N AM LF P+ T +L +++ G +E E
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT--TMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 160 VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEA 219
P+ A+++ Y K G +N A +F M +N+ +W SM +G LNGR E
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 220 MELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM 279
L + + G+ P+ +T S LSA
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSA----------------------------------- 332
Query: 280 YSKCGSIESALAVFKAIANK-----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
Y G +E + +FK++ + + H+ I+ LG G +A + + M +KP
Sbjct: 333 YRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP---IKP 389
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMI-----NEYKIVPTVEHYGCLVDILCRAGHLQ 389
AI + NACS G G + ++ +E E Y L ++L G
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 390 QAKNIIESMPMR 401
+ + + + M R
Sbjct: 450 EVEKLRKEMKER 461
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 1 MHKPTLVSWNLIISCYVH-----NHRSNDALLLFRQM--LHHDLLPDGFTLPCVIKGCSR 53
M + T V+WN +I Y NH + A++LFR+ + P T+ CV+ S+
Sbjct: 173 MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ 232
Query: 54 LHAVQEGKQIHGYVLKIGFG--FDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWN 111
++ G +HGY+ K+GF D F+ ++LV+MY+K G + A VF+ M ++V +W
Sbjct: 233 TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWT 292
Query: 112 SLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK 167
S+ G A NG L + M + T+T+LL G VE E+F M +
Sbjct: 293 SMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Query: 168 SSVS-----WNAMINGYMKSGKINLARQLFGQMPGR-NLISWNSMISGYQLNGRFLEAME 221
V+ + +++ K+G+I A Q MP + + I S+ + + G + E
Sbjct: 353 FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEE 412
Query: 222 LFEVLLK-----EGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
+ + LL+ E L S ALS V + G+W+
Sbjct: 413 IGKALLEIEREDEKLSGSECEDYVALSNV----LAHKGKWVE 450
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 227/514 (44%), Gaps = 33/514 (6%)
Query: 101 KMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRD-AFTWTALLDGLAKCGKVEAARE 159
K +DR+V D Y NV VA+ +++ + + LL
Sbjct: 129 KTIDREVYDMIMEFDEYCIQENVRVALTTMEKLEKKGYVMDFVRLLK------------- 175
Query: 160 VFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNS-MISGYQL---NGR 215
Q+ ++ +V + + K + R L + L + MI Y +G+
Sbjct: 176 -LTQLCREGNVYYEVSVLEEAKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGK 234
Query: 216 FLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV-LGNGRWIHSFMVKHCFDLDGVLGT 274
+A+ ++L + ++ L L+ + G A L + +H + LD
Sbjct: 235 VKKALYTIDILASMNYVVD-LSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNH 293
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
L+EMYS CG A +VF+ ++ K L W II +G + A+++F + G P
Sbjct: 294 VLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIP 353
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
F G+ AC G VDEG F+ M +Y I P++E Y LV++ G L +A
Sbjct: 354 DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 395 IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKW 454
+E MPM PN +W +L++ SR HGNLE+G+Y A + DP + I A
Sbjct: 414 VERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDV 473
Query: 455 DKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLA 514
+K S + K G+L S+ E R GD + P+ ++ LR + +
Sbjct: 474 EKES----LKKRSGILHGVKSSMQEFRA-------GDTNLPENDELFQLLRNLKMHMVEV 522
Query: 515 GHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAV 574
G+V +T L R+A + +LN R P ++KNLRVC DCH
Sbjct: 523 GYVAETRMAL-HDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNA 581
Query: 575 TKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
K++S I GRE+I RD RFH KNG C+C D+W
Sbjct: 582 LKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 205/401 (51%), Gaps = 14/401 (3%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQEGKQIH 64
+V W +I+ HN R +AL LFR M+ + + P+ L ++ + A++ GK++H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 65 GYVLKI-GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
+VLK + FV S L+++Y K G+M R+VF R+ +SW +L+ GYA NG
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 124 EVAMK----LFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQ------MPKKSSVSWN 173
+ A++ + E D T +L A+ ++ +E+ +P S V+
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT-- 457
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
+++ Y K G +LF ++ RN+ +W +MI Y N +E+F ++L P
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
VT+ L+ S L L G+ +H ++K F+ + +I+MY KCG + SA F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 294 KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
A+A K WTAII G + L A+ F +M G P+ TF VL+ CS G VD
Sbjct: 578 DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
E + F++M+ Y + P+ EHY ++++L R G +++A+ +
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 208/419 (49%), Gaps = 16/419 (3%)
Query: 8 SWNLIISCYV--HNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
SWN ++ V R D L F +M + + ++L V K + A+++G + H
Sbjct: 179 SWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHA 238
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEV 125
+K G F+++SLV+MY K G++GLAR+VFD++V+RD+V W ++I G A N
Sbjct: 239 LAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWE 298
Query: 126 AMKLFDEMPSRD-----AFTWTALLDGLAKCGKVEAAREVFDQMPK-----KSSVSWNAM 175
A+ LF M S + + T +L L ++ +EV + K + + +
Sbjct: 299 ALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGL 358
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
I+ Y K G + R++F RN ISW +++SGY NGRF +A+ + +EG P
Sbjct: 359 IDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDV 418
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
VTI + L + L + G+ IH + +K+ F + L TSL+ MYSKCG E + +F
Sbjct: 419 VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDR 478
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
+ + + WTA+I + +E+F M +P ++T VL CS + G
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 356 NKCFDMMI-NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSS 413
+ ++ E++ +P V ++ + + G L+ A +++ ++ + W +++ +
Sbjct: 539 KELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEA 594
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 188/456 (41%), Gaps = 80/456 (17%)
Query: 13 ISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGF 72
I + + AL + + + + T +++ C R ++ GKQ+H ++ G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 73 GFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGN--VEVAMKLF 130
++F+++ LV+MY G + A+KVFD+ +V SWN+L+ G +G + + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 131 DEMPS---------------------------------------RDAFTWTALLDGLAKC 151
EM F T+L+D KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 152 GKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQ 211
GKV AR VFD++ ++ V W A MI+G
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGA-------------------------------MIAGLA 291
Query: 212 LNGRFLEAMELFEVLL-KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK-HCFDLD 269
N R EA+ LF ++ +E + P+ V + + L + + L G+ +H+ ++K +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 270 GVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR 329
+ + LI++Y KCG + S VF + WTA++ G +G DQAL + M++
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 330 IGMKPHAITFIGVLNACSHKGLVDEGNK--CFDMMINEYKIVPTVEHYGCLVDILCRAGH 387
G +P +T VL C+ + +G + C+ + + +P V L+ + + G
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYAL---KNLFLPNVSLVTSLMVMYSKCGV 468
Query: 388 LQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
+ + + + R N W +++ + +L G
Sbjct: 469 PEYPIRLFDRLEQR-NVKAWTAMIDCYVENCDLRAG 503
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 190/383 (49%), Gaps = 30/383 (7%)
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
LL +G MP + + + L L + + +H ++ F D L +I M+ +C S
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
I A VF + +K + W ++ +G+ D AL LF EM + G+KP+ TF+ V A
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 346
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
C+ G ++E FD M NE+ I P EHY ++ +L + GHL +A+ I +P P
Sbjct: 347 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 406
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
W ++ + +R HG++++ +Y +++ DP +++ I K K
Sbjct: 407 FWEAMRNYARLHGDIDLEDYMEELMVDVDPSK----AVINKIPTPPPK---------SFK 453
Query: 466 ERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVPDTSQVLX 525
E ++ + I+E R N D++ +EM+ K K +VPDT VL
Sbjct: 454 ETNMVT-SKSRILEFR---NLTFYKDEA-----------KEMAAK-KGVVYVPDTRFVL- 496
Query: 526 XXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKLLSAIYGRE 585
RLAI++G++ R + I+KNLRVC DCH K++S I GR
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 586 IIVRDNSRFHHFKNGTCSCNDFW 608
+IVRDN RFHHFK+G CSC D+W
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 31 QMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWG 90
++L +PD + + C+ L +++ K++H + L+ F D + + +++M+ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 91 EMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEM------PSRDAFTWTAL 144
+ A++VFD MVD+D+ SW+ ++ Y+ NG + A+ LF+EM P+ + F L
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 145 LDGLAKCGKVEAAREVFDQMPKKSSVS 171
A G +E A FD M + +S
Sbjct: 346 --ACATVGGIEEAFLHFDSMKNEHGIS 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 126 AMKLFDE--MPSRDAFTWTALLDGLAKCGKVEAAREVFD---QMPKKSSVSWNAM-INGY 179
A++L D+ MP R+ F L + A +E +++V D Q + N M I+ +
Sbjct: 224 AIELLDKGAMPDRECFVL--LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMF 281
Query: 180 MKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTIL 239
+ I A+++F M +++ SW+ M+ Y NG +A+ LFE + K GL P+ T L
Sbjct: 282 GECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFL 341
Query: 240 S---ALSAVSGLA-------VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+ A + V G+ + N I S +H + GVLG KCG + A
Sbjct: 342 TVFLACATVGGIEEAFLHFDSMKNEHGI-SPKTEHYLGVLGVLG--------KCGHLVEA 392
Query: 290 LAVFKAIANKKLGH-WTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+ + + W A+ +HG D LE +ME + + P
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYARLHGDID--LEDYMEELMVDVDP 436
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 217/478 (45%), Gaps = 113/478 (23%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P + N + + +ND L L+ Q ++PD F+ P VIK R G
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILF 123
Query: 64 HGYVLKIGFG-------------------------FDKFVQSS------LVNMYAKWG-- 90
V K+GF FD+ Q +++ Y KWG
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 91 -----------------------------EMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
++ ARK FD+M ++ VVSWN+++ GYA+NG
Sbjct: 184 EEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG 243
Query: 122 NVEVAMKLFDEM------------------------PSR---------------DAFTWT 142
E A++LF++M PS + F T
Sbjct: 244 FTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT 303
Query: 143 ALLDGLAKCGKVEAAREVFDQM-PKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI 201
ALLD AKC +++AR +F+++ +++ V+WNAMI+GY + G ++ ARQLF MP RN++
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 202 SWNSMISGYQLNGRFLEAMELFEVLLKEG-LMPSHVTILSALSAVSGLAVLGNGRWIHSF 260
SWNS+I+GY NG+ A+E FE ++ G P VT++S LSA +A L G I +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 261 MVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQA 320
+ K+ L+ SLI MY++ G++ A VF + + + + + +G +
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVET 483
Query: 321 LELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCL 378
L L +M+ G++P +T+ VL AC+ GL+ EG + F + N P +HY C+
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 41/298 (13%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++VSWN ++S Y N + DAL LF ML + P+ T VI CS
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDRDVVSWNSLIDGYAR 119
+ + + + + FV+++L++M+AK ++ AR++F+++ R++V+WN++I GY R
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTR 343
Query: 120 NGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQM-------P------- 165
G++ A +LFD MP R+ +W +L+ G A G+ A E F+ M P
Sbjct: 344 IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
Query: 166 ---------------------KKSSVSWN-----AMINGYMKSGKINLARQLFGQMPGRN 199
+K+ + N ++I Y + G + A+++F +M R+
Sbjct: 404 VLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD 463
Query: 200 LISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWI 257
++S+N++ + + NG +E + L + EG+ P VT S L+A + +L G+ I
Sbjct: 464 VVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 95 ARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDE------MPSRDAFTWTALLDGL 148
R +FD + +V NS+ +++ ++L+++ MP DAF++ ++
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP--DAFSFPVVIKSA 116
Query: 149 AKCGKV-EAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMI 207
+ G + +A E K N +++ Y+K + AR++F Q+ R WN MI
Sbjct: 117 GRFGILFQALVEKLGFF--KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 208 SGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD 267
SGY G EA +LF+ +MP +
Sbjct: 175 SGYWKWGNKEEACKLFD------MMPEN-------------------------------- 196
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
D V T +I ++K +E+A F + K + W A++ G +G + AL LF +M
Sbjct: 197 -DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 328 RRIGMKPHAITFIGVLNACSHKGLVDEG-NKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
R+G++P+ T++ V++ACS + D + +I+E ++ L+D+ +
Sbjct: 256 LRLGVRPNETTWVIVISACSFRA--DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 387 HLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
+Q A+ I + + N V W +++S G++ +A L + P
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMS----SARQLFDTMP 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 110/271 (40%), Gaps = 21/271 (7%)
Query: 148 LAKCGKVEAAREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMI 207
+ ++ A VF+ +P++S + + R +F + N+ NSM
Sbjct: 19 FPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMF 78
Query: 208 SGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD 267
+ + + L+E + G+MP + + + +L + + K F
Sbjct: 79 KYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFF 133
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEM 327
D + +++MY K S+ESA VF I+ +K W +I G G ++A +LF
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF--- 190
Query: 328 RRIGMKPH--AITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
M P +++ ++ + ++ K FD M + +V + ++ +
Sbjct: 191 ---DMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEK-----SVVSWNAMLSGYAQN 242
Query: 386 GHLQQAKNIIESM---PMRPNKVIWMSLLSS 413
G + A + M +RPN+ W+ ++S+
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 188/355 (52%), Gaps = 10/355 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M + ++SW +IS A+ +F ML+H LP+ FT+ ++K CS A++ G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARN 120
+Q+H V+K D FV +SL++MYAK GE+ RKVFD M +R+ V+W S+I +AR
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAMI 176
G E A+ LF M R + T ++L G + +E+ Q+ K +S+ N I
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKNVYI 422
Query: 177 NG-----YMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
Y K G+ A + Q+P R+++SW +MISG G EA++ + +++EG+
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P+ T SAL A + L GR IHS K+ + +G++LI MY+KCG + A
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
VF ++ K L W A+I+G +G +AL+L M G + F +L+ C
Sbjct: 543 VFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 218/420 (51%), Gaps = 12/420 (2%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQE 59
M + V+W +I Y+ ++A LF + H + + C++ CSR +
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
G+Q+HG ++K+G G + V+SSLV YA+ GE+ A + FD M ++DV+SW ++I +R
Sbjct: 203 GRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREV----FDQMPKKSSVS 171
G+ A+ +F M + + FT ++L ++ + R+V +M K
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
++++ Y K G+I+ R++F M RN ++W S+I+ + G EA+ LF ++ + L
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+ +++T++S L A + L G+ +H+ ++K+ + + +G++L+ +Y KCG A
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 292 VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
V + + ++ + WTA+I G G +AL+ EM + G++P+ T+ L AC++
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSES 501
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLL 411
+ G + + + V L+ + + G + +A + +SMP + N V W +++
Sbjct: 502 LLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 190/370 (51%), Gaps = 16/370 (4%)
Query: 61 KQIHGYVLKIGFGFDK---FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGY 117
K+IH LK FD + ++L++ + G++ ARKVFD M +++ V+W ++IDGY
Sbjct: 102 KRIHAMALKC---FDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 118 ARNGNVEVAMKLFDEMPSRDA-FT----WTALLDGLAKCGKVEAAREVFDQMPK---KSS 169
+ G + A LF++ FT + LL+ ++ + E R+V M K +
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL 218
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+ ++++ Y + G++ A + F M +++ISW ++IS G ++A+ +F +L
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
+P+ T+ S L A S L GR +HS +VK D +GTSL++MY+KCG I
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 290 LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
VF ++N+ WT+II G ++A+ LF M+R + + +T + +L AC
Sbjct: 339 RKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSV 398
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMS 409
G + G + +I I V LV + C+ G + A N+++ +P R + V W +
Sbjct: 399 GALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTA 456
Query: 410 LLSSSRNHGN 419
++S + G+
Sbjct: 457 MISGCSSLGH 466
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 187/397 (47%), Gaps = 17/397 (4%)
Query: 212 LNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV 271
+ G + EA+E+ + L +G + +L L R +H ++ D
Sbjct: 96 IQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 272 LGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIG 331
++IEMYS C S++ AL VF+ + G ++ +G ++A++LF + G
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 332 MKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQA 391
KP+ F V + C+ G V EG+ F M EY IVP++EHY + +L +GHL +A
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 392 KNIIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA 451
N +E MPM P+ +W +L++ SR HG++E+G+ A + + D A
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------A 319
Query: 452 GKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKL 511
+ DKVS + + S + F D SHPQ IY L + +L
Sbjct: 320 TRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 512 KLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDC 571
K G+VPDT + +A+ LL + R+ I ++ N+R+ DC
Sbjct: 380 KEMGYVPDT-RYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDC 438
Query: 572 HAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
H + KL+S I GR++I RD +H FKNG C CN+ W
Sbjct: 439 HDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 189/397 (47%), Gaps = 21/397 (5%)
Query: 214 GRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLG 273
G+ +A+E+ + EG + + L + +H F+ D
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMK 333
S+IEMYS CGS+E AL VF ++ + L W +I +G + A++ F ++ G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 334 PHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKN 393
P F + AC G ++EG F+ M EY I+P +EHY LV +L G+L +A
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 394 IIESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAA-G 452
+ES M PN +W +L++ SR HG+L +G+ C ++ + A+
Sbjct: 340 FVES--MEPNVDLWETLMNLSRVHGDLILGDR--------------CQDMVEQLDASRLN 383
Query: 453 KWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFI-VGDKSHPQTKAIYAKLREMSKKL 511
K K V +K ++K+ + + R++ GD S P+ + +Y L+ + + +
Sbjct: 384 KESKAGLVP--VKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHM 441
Query: 512 KLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDC 571
G+VP S++ R A L+ R+ IR+MKNLRVC DC
Sbjct: 442 IEIGYVP-LSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADC 500
Query: 572 HAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
H KL+S I GRE+I RD RFHH K+G CSC ++W
Sbjct: 501 HNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 106 DVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMP 165
D+ ++NS+I+ Y+ G+VE A+ +F+ MP R+ TW ++ AK G+ E A + F +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEV 225
++ + M +I A + G M L+ + SM Y + + L ++
Sbjct: 275 QEGNKPDGEMFK------EIFFACGVLGDM-NEGLLHFESMYKEYGIIPCMEHYVSLVKM 327
Query: 226 LLKEGLMPSHVTILSALSAVSGL-AVLGNGRWIHSFMV--KHCFDLDGVLGTSLIEMYSK 282
L + G + + + ++ L L N +H ++ C D+ L S + SK
Sbjct: 328 LAEPGYLDEALRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESK 387
Query: 283 CG 284
G
Sbjct: 388 AG 389
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 16/391 (4%)
Query: 218 EAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLI 277
EA+E+ ++L +G + +L + L R +H + LD ++I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVI 150
Query: 278 EMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
EMYS C S + AL VF + + W +I L +G ++A+++F G KP
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
F V AC G ++EG F+ M +Y +V ++E Y ++++L GHL +A + +E
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 398 MPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKV 457
M + P+ +W +L++ G LE+G+ A + + D + + + AA +
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKES-NAGLVAAKASDSAM 329
Query: 458 SHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHV 517
++E+ + + D + +++ F GD SH T + + R + ++ G V
Sbjct: 330 EKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVSAF---RSLKVQMLDIGFV 379
Query: 518 PDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIRIMKNLRVCNDCHAVTKL 577
P T +V +LA + ++N E R P+ +++N+R C D H K+
Sbjct: 380 PAT-RVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKM 438
Query: 578 LSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+S I GR +I RD ++H +KNG CSC D+W
Sbjct: 439 ISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 77 FVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR 136
FVQ V+ YA+ MV+ D + + A+++ D + +
Sbjct: 60 FVQCRRVSSYAQ-------------MVNNHQSVTIETFDALCKQVKIREALEVIDILEDK 106
Query: 137 DAFTWTALLDGLAK-CGKVEA---AREVFDQMPKKSSVSWNAMINGYMKSGKINLARQLF 192
L GLAK CG+VEA AR V D + + S++ +I Y + A +F
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVF 166
Query: 193 GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
+MP RN +W +MI NG A+++F ++EG P + A + +
Sbjct: 167 NEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDIN 226
Query: 253 NGRWIHSFMVKHCFDLDGVLG----TSLIEMYSKCGSIESAL 290
G M + D VL ++IEM + CG ++ AL
Sbjct: 227 EGLLHFESMYR---DYGMVLSMEDYVNVIEMLAACGHLDEAL 265
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 231/499 (46%), Gaps = 33/499 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQM----LHHDLLPDGFTLPCVIKGCSRLHAVQE 59
P+LV ++ S + N L +Q+ + H++ + C + C A
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS- 144
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLID 115
+ G V+K+G+ D ++L+ G++ A + D+MV+ DVV++NS+++
Sbjct: 145 ---VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 116 GYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KK 167
G R+G+ +A+ L +M R D FT++ ++D L + G ++AA +F +M K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELF 223
S V++N+++ G K+GK N L M R N+I++N ++ + G+ EA EL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
+ ++ G+ P+ +T + + L + MV++ D V TSLI+ Y
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 284 GSIESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
++ + VF+ I+ + L ++ ++ G G A ELF EM G+ P +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+L+ G +++ + F+ + + K+ + Y +++ +C+ G ++ A N+ S+P
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 400 ---MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGC-YTLLSNIYAAAGKWD 455
++PN + + ++S G+L + E C Y L + G
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 456 KVSHVREMMKERGVLKDAG 474
+ + E MK G DA
Sbjct: 561 ASAKLIEEMKSCGFSADAS 579
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 51/286 (17%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
K ++V++N ++ + ND LL + M+ +++P+ T ++ + +QE +
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGY- 117
++ ++ G + ++L++ Y + A + D MV D+V++ SLI GY
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 118 ----------------------------------ARNGNVEVAMKLFDEMPSR----DAF 139
++G +++A +LF EM S D
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQM 195
T+ LLDGL GK+E A E+F+ + K V + +I G K GK+ A LF +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
P + N++++ MISG G EA L + ++G P+ T
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 213/427 (49%), Gaps = 75/427 (17%)
Query: 24 DALLLFRQMLHHDLLPDGFTLPCVIKGC----SRLHAVQEGKQIHGYVLKI---GFGFDK 76
DA+ FR H F +P I+GC R+ + I G+ ++I GF +
Sbjct: 188 DAIQCFRLSRKH-----RFDVP--IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNV 240
Query: 77 FVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGYARNGNVEVAMKLFDE 132
+V + L+N + K G + A+KVFD++ R VVS+N+LI+GY + GN++ +L +
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 133 MP-SR---DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGK 184
M SR D FT++AL++ L K K++ A +FD+M K+ + V + +I+G+ ++G+
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 185 INLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILS 240
I+L ++ + +M + +++ +N++++G+ NG + A + + +++ GL P +T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY-- 418
Query: 241 ALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK-----A 295
T+LI+ + + G +E+AL + K
Sbjct: 419 ---------------------------------TTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 296 IANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEG 355
I ++G ++A++ G+ G A EM R G+KP +T+ +++A KG G
Sbjct: 446 IELDRVG-FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 356 NKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSLLS 412
K M ++ VP+V Y L++ LC+ G ++ A ++++M + P+ + + +LL
Sbjct: 505 FKLLKEMQSDGH-VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 413 SSRNHGN 419
H N
Sbjct: 564 GHHRHAN 570
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 152/325 (46%), Gaps = 28/325 (8%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+PT+VS+N +I+ Y ++ L QM PD FT +I + + +
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ + K G + + ++L++ +++ GE+ L ++ + KM+ + D+V +N+L++G+
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
+NG++ A + D M R D T+T L+DG + G VE A E+ +M + V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVL 226
++A++ G K G++ A + +M + +++ M+ + G +L + +
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS- 285
+G +PS VT L+ + L + N + M+ D + +L+E + + +
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Query: 286 -----------IESALAVFKAIANK 299
I + LA +K+I N+
Sbjct: 572 SKRYIQKPEIGIVADLASYKSIVNE 596
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 151/351 (43%), Gaps = 47/351 (13%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVL 68
+N++++ + +DA +F ++ L P + +I G ++ + EG ++ +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 69 KIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVS----WNSLIDGYARNGNVE 124
K D F S+L+N K +M A +FD+M R ++ + +LI G++RNG ++
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 125 VAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMI 176
+ + + +M S+ D + L++G K G + AAR + D M ++ +++ +I
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 177 NGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+G+ + G + A ++ +M + + +++++ G GR ++A +L+ G+
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P VT + A C D G L++ G + S +
Sbjct: 483 PDDVTYTMMMDAF-------------------CKKGDAQTGFKLLKEMQSDGHVPSVVT- 522
Query: 293 FKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
+ ++ GL G A L M IG+ P IT+ +L
Sbjct: 523 -----------YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 224/534 (41%), Gaps = 104/534 (19%)
Query: 3 KPTLVSWNLIISCYVHNHRS-NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
KPTL+++N+I++ + N L +M + PD +T +I C R QE
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGY 117
Q+ + GF +DK ++L+++Y K A KV ++MV +V++NSLI Y
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSS 169
AR+G ++ AM+L ++M + D FT+T LL G + GKVE+A +F++M K +
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEV 225
++NA I Y GK ++F ++ ++++WN++++ + NG E +F+
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ + G +P T +LI YS+CGS
Sbjct: 480 MKRAGFVPERETF-----------------------------------NTLISAYSRCGS 504
Query: 286 IESALAVFK----AIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
E A+ V++ A L + ++ L G+ +Q+ ++ EM KP+ +T+
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 342 VLNA-----------------------------------CSHKGLVDEGNKCFDMMINEY 366
+L+A CS L+ E + F + E
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KER 623
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR---PNKVIWMSLL---SSSRNHGNL 420
P + +V I R + +A +++ M R P+ + SL+ S S + G
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 421 E--IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
E + E A + PD Y + Y + S + M+ G++ D
Sbjct: 684 EEILREILAKGI---KPDIIS-YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 190/435 (43%), Gaps = 42/435 (9%)
Query: 71 GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNGN---- 122
GF D + +SL++ +A G A VF KM + ++++N +++ + + G
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 123 -VEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMIN 177
+ K+ + + DA+T+ L+ + + A +VF++M V++NA+++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 178 GYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMP 233
Y KS + A ++ +M +++++NS+IS Y +G EAMEL + ++G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 234 SHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF 293
T + LS + + I M + + I+MY G + +F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 294 KAIA----NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHK 349
I + + W ++ G +G+ + +F EM+R G P TF +++A S
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 350 GLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVI 406
G ++ + M++ + P + Y ++ L R G +Q++ ++ M +PN++
Sbjct: 503 GSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIEA------DPDATGCYTLLSNIYAAAGKWDKVSHV 460
+ SLL + N EIG H+L E +P A LL + K D +
Sbjct: 562 YCSLLHAYAN--GKEIG--LMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLPEA 613
Query: 461 REM---MKERGVLKD 472
+KERG D
Sbjct: 614 ERAFSELKERGFSPD 628
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 180/455 (39%), Gaps = 66/455 (14%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V++N +IS Y + ++A+ L QM PD FT ++ G R V+ I
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYAR 119
+ G + ++ + MY G+ K+FD++ + D+V+WN+L+ + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 120 NGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQM------PKK 167
NG +F EM P R+ T+ L+ ++CG E A V+ +M P
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMP-GR---NLISWNSMISGYQLNGRFL------ 217
S+ +N ++ + G + ++ +M GR N +++ S++ Y NG+ +
Sbjct: 525 ST--YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSL 581
Query: 218 ------------------------------EAMELFEVLLKEGLMPSHVTILSALSAVSG 247
EA F L + G P T+ S +S
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Query: 248 LAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----H 303
++ + +M + F SL+ M+S+ + + + I K +
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
+ +I + A +F EMR G+ P IT+ + + + + +E MI
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
++ P Y +VD C+ +AK +E +
Sbjct: 762 -KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 14/216 (6%)
Query: 268 LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALEL 323
LD + +I M K G + SA +F + +T++I G +A+ +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 324 FMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMM--INEYKIVPTVEHYGCLVDI 381
F +M G KP IT+ +LN G NK ++ + I P Y L+
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGT--PWNKITSLVEKMKSDGIAPDAYTYNTLI-T 287
Query: 382 LCRAGHL-QQAKNIIESMP---MRPNKVIWMSLLS-SSRNHGNLEIGEYAAHNLIEADPD 436
C+ G L Q+A + E M +KV + +LL ++H E + ++
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 437 ATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLKD 472
+ Y L + YA G D+ ++ M E+G D
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 227/444 (51%), Gaps = 26/444 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P +V+ + +++ Y H+ R +DA+ L QM+ PD FT +I G + E
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ +++ G D ++VN K G++ LA + KM ++ DVV +N++IDG
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK---SS 169
+ +++ A+ LF EM ++ D FT+++L+ L G+ +A+R + D + +K +
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V+++A+I+ ++K GK+ A +L+ +M R ++ +++S+I+G+ ++ R EA +FE+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ + P+ VT + + + G + M + + V T+LI + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 286 IESALAVFKAIAN----KKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
++A VFK + + + + ++ GL +G +A+ +F ++R M+P T+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM--- 398
++ G V++G + F ++ + P V Y ++ CR G ++A ++++ M
Sbjct: 509 MIEGMCKAGKVEDGWELF-CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 399 -PMRPNKVIWMSLLSSSRNHGNLE 421
P+ PN + +L+ + G+ E
Sbjct: 568 GPL-PNSGTYNTLIRARLRDGDRE 590
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/545 (21%), Positives = 235/545 (43%), Gaps = 39/545 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V +N ++S ++ + L QM + D +T I R + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGYAR 119
++K+G+ D SSL+N Y + A + D+MV+ D ++ +LI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+ A+ L D+M R D T+ +++GL K G ++ A + +M K V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+G K ++ A LF +M + ++ +++S+IS GR+ +A L ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P+ VT + + A L ++ M+K D D +SLI + ++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K + ++ +I G ++ +ELF EM + G+ + +T+ ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
+ D F M++ + P + Y L+D LC+ G L +A + E + M
Sbjct: 441 HGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 401 RPNKVIWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
P+ + ++ G +E G + +L P+ T++S + G ++
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG-FCRKGSKEEAD 558
Query: 459 HVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVP 518
+ + MKE G L ++G R +L GD+ E+ K+++ G
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRD---GDREASA---------ELIKEMRSCGFAG 606
Query: 519 DTSQV 523
D S +
Sbjct: 607 DASTI 611
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 204/418 (48%), Gaps = 22/418 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+ P++V+ N +++ + H +R ++A+ L QM+ PD T ++ G + + E
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ ++ G D +++N K GE LA + +KM ++ DVV +N++IDG
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKKSS--- 169
+ +++ A LF++M ++ D FT+ L+ L G+ +A+R + D + K +
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR-----NLISWNSMISGYQLNGRFLEAMELFE 224
V +NA+I+ ++K GK+ A +L+ +M +++++N++I G+ R E ME+F
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
+ + GL+ + VT + + N + + MV D + L++ G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 285 SIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
++E+AL VF+ + + + +T +I L G + +LF + G+KP+ +T+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
+++ KGL +E + F + + E +P Y L+ R G + +I+ M
Sbjct: 501 TMMSGFCRKGLKEEADALF-VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 234/516 (45%), Gaps = 38/516 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V ++ ++S ++ + + L QM + + + +T I R + I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G ++K+G+G +SL+N + + A + D+MV+ D V++ +L+ G +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+ A+ L + M + D T+ A+++GL K G+ + A + ++M K V
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+G K ++ A LF +M + ++ ++N +IS GR+ +A L +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV--KHCFDLDGVLGTSLIEMYSKCGS 285
++ + P V + + A L ++ MV KHCF D V +LI+ + K
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYKR 371
Query: 286 IESALAVFKAIANKKL-GH---WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+E + VF+ ++ + L G+ +T +I G D A +F +M G+ P +T+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM- 400
+L+ + G V+ F+ M + + + Y +++ LC+AG ++ ++ S+ +
Sbjct: 432 LLDGLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 401 --RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDA----TGCYTLLSNIYAAAGKW 454
+PN V + +++S G + E A +E D +G Y L G
Sbjct: 491 GVKPNVVTYTTMMSGFCRKG---LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 455 DKVSHVREMMKERGVLKDAGC----SIVEHRGKLNR 486
+ + + M+ G DA + + H G+L++
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 214/457 (46%), Gaps = 54/457 (11%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP + ++ ++I + A L QML L+P+ T +I G + +++
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWG---EMGLARKVFDKMVDRDVVSWNSLIDGYAR 119
+ + + + L+ Y K MG+ K+ ++ V DVV++NSLIDG R
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
+GN + A +L M R D +T+T+++D L K +VE A ++FD + +K + V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLL 227
+ A+I+GY K+GK++ A + +M +N +++N++I G +G+ EA L E ++
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSF-----MVKHCFDLDGVLGTSLIEMYSK 282
K GL P+ T + +L +G + H++ M+ D T+ I+ Y +
Sbjct: 595 KIGLQPTVST-----DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 283 CGSIESALAVFKAI----ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
G + A + + + L ++++I G G G + A ++ MR G +P T
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 339 FIGVLNAC------SHKGLVDEGNKC-------FDMMIN------EYKIVPTVEHYGCLV 379
F+ ++ KG E C FD ++ E+ + P + Y L+
Sbjct: 710 FLSLIKHLLEMKYGKQKG--SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 380 DILCRAGHLQQAKNIIESMP----MRPNKVIWMSLLS 412
+C G+L+ A+ + + M + P+++++ +LLS
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 224/500 (44%), Gaps = 39/500 (7%)
Query: 7 VSWNLIISCY--VHNHRSNDALL-----LFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQE 59
+ + LII CY + N + L+ ++ +ML + P+ +T ++ G +L V+E
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLID 115
Q +++ G D F +SL+ Y + ++ A KVF++M R+ V++ LI
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 116 GYARNGNVEVAMKLFDEMPSRDAF----TWTALLDGLAKCG---KVEA---AREVFDQMP 165
G ++ AM LF +M + F T+T L+ L CG K EA +E+ +
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL--CGSERKSEALNLVKEMEETGI 354
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAME 221
K + ++ +I+ K AR+L GQM + N+I++N++I+GY G +A++
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 222 LFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
+ E++ L P+ T + V + + M++ D V SLI+
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 282 KCGSIESALAVFKAIANKKL--GHW--TAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
+ G+ +SA + + ++ L W T++I L ++A +LF + + G+ P+ +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
+ +++ G VDE + + M+++ +P + L+ LC G L++A + E
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 398 MP---MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA--DPDATGCYTLLSNIYAAAG 452
M ++P L+ G+ + ++ + PDA YT Y G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT-YTTFIQTYCREG 651
Query: 453 KWDKVSHVREMMKERGVLKD 472
+ + M+E GV D
Sbjct: 652 RLLDAEDMMAKMRENGVSPD 671
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 187/450 (41%), Gaps = 94/450 (20%)
Query: 47 VIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV--- 103
++ +R V E KQ++ +L+ + + + +VN Y K G + A + K+V
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 104 -DRDVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAR 158
D D ++ SLI GY + +++ A K+F+EMP R+ +T L+ GL +++ A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 159 EVFDQMP--------KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGY 210
++F +M + +V ++ KS +NL +++ N+ ++ +I
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 211 QLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDG 270
+F +A EL +L++GLMP+ +T
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITY-------------------------------- 396
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFME 326
+LI Y K G IE A+ V + + ++KL + +I G + +A+ + +
Sbjct: 397 ---NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNK 452
Query: 327 MRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
M + P +T+ +++ G D + +M N+ +VP Y ++D LC++
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSK 511
Query: 387 HLQQAKNIIESMPMR---PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATGCYTL 443
+++A ++ +S+ + PN V+ YT
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVM----------------------------------YTA 537
Query: 444 LSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
L + Y AGK D+ + E M + L ++
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 219/436 (50%), Gaps = 27/436 (6%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P +V+ + +++ Y H+ R +DA+ L QM+ PD FT +I G + E
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ +++ G D ++VN K G++ LA + +KM + +VV +N++ID
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK---SS 169
+ +VEVA+ LF EM ++ + T+ +L++ L G+ +A+R + + + KK +
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEV 225
V++NA+I+ + K GK+ A +L +M R++ I++N +I+G+ ++ R EA ++F+
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ + +P+ T + ++ + +G + M + + V T++I+ + + G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 286 IESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+SA VFK + + ++ ++ ++ GL +G D AL +F +++ M+ + +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP-- 399
++ G V E F + I P V Y ++ LC LQ+A ++ M
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 400 -MRPNKVIWMSLLSSS 414
PN + +L+ ++
Sbjct: 565 GTLPNSGTYNTLIRAN 580
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 209/428 (48%), Gaps = 23/428 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L ++++ I+C+ + + AL + +M+ PD TL ++ G + + +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNG 121
++++G+ D F ++L++ + A + D+MV R D+V++ ++++G + G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 122 NVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
++++A+ L ++M + + + ++D L K VE A ++F +M K + V++N
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 174 AMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
++IN G+ + A +L M + N++++N++I + G+ +EA +L E +++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGSIES 288
+ P +T ++ L + + FMV K C T LI + KC +E
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT-LINGFCKCKRVED 416
Query: 289 ALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
+ +F+ ++ + L +T II G G D A +F +M + +T+ +L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNK 404
G +D F + + ++ + Y +++ +C+AG + +A ++ S+ ++P+
Sbjct: 477 GLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 405 VIWMSLLS 412
V + +++S
Sbjct: 536 VTYNTMIS 543
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 231/545 (42%), Gaps = 42/545 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V +N ++S ++ + L QM + D +T I R + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
++K+G+ D SSL+N Y + A + D+MV+ D ++ +LI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
+ A+ L D+M R D T+ +++GL K G ++ A + ++M K + V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+ K + +A LF +M + N++++NS+I+ GR+ +A L +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
++ + P+ VT + + A L +H M++ D D + LI + ++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +FK + +K + + +I G + +ELF EM + G+ + +T+ ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPT-VEHYGCLVDILCRAGHLQQAKNI---IESMP 399
G D F M++ VPT + Y L+ LC G L A I ++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNR--VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 400 MRPNKVIWMSLLSSSRNHGNLEIGE-YAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
M N I+ +++ G ++GE + + PD T++S + + +
Sbjct: 499 MELNIFIYNTMIEGMCKAG--KVGEAWDLFCSLSIKPDVVTYNTMISGL-CSKRLLQEAD 555
Query: 459 HVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVP 518
+ MKE G L ++G R L A E+ K+++ +G V
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLR------------DCDRAASAELIKEMRSSGFVG 603
Query: 519 DTSQV 523
D S +
Sbjct: 604 DASTI 608
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 218 EAMELFEVLLKEGLMPSHVTILSALSAVSGL----AVLGNGRWIHSFMVKH--------- 264
+A++LF ++K PS V LSAV+ + V+ G + + + H
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 265 -CF---------------------DLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG 302
CF + D V +SL+ Y I A+A+ + ++G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV--EMG 183
Query: 303 H------WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGN 356
+ +T +I GL +H A +A+ L +M + G +P +T+ V+N +G +D
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 357 KCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI---IESMPMRPNKVIWMSLLSS 413
+ M +I V + ++D LC+ H++ A ++ +E+ +RPN V + SL++
Sbjct: 244 NLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 414 SRNHGNLEIGEYAAHNLIEA--DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVLK 471
N+G N++E +P+ + L + + GK + + E M +R +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVT-FNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 472 DA 473
D
Sbjct: 362 DT 363
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 201/452 (44%), Gaps = 56/452 (12%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P +V+ N +++ + H +R +DA+ L QM+ PD FT +I G R + E
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ ++ G D +VN K G++ LA + KM ++ VV +N++ID
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 118 ARNGNVEVAMKLFDEMPSR---------------------------------------DA 138
NV A+ LF EM ++ +
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 139 FTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVSWNAMINGYMKSGKINLARQLFGQ 194
T++AL+D K GK+ A +++D+M K+S +++++ING+ +++ A+ +F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 195 MPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
M + N++++N++I G+ R E MELF + + GL+ + VT + +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTA 306
N + + MV D + + L++ G +E+AL VF+ + K+ +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
+I G+ G + +LF + G+KP+ +T+ +++ KGL +E + F M E
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
+ P Y L+ R G + +I M
Sbjct: 567 PL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 239/510 (46%), Gaps = 31/510 (6%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L +++++I+C+ + + AL + +M+ PD TL ++ G + + + + G
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNG 121
++++G+ D F ++L++ + A + D+MV + D+V++ +++G + G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 122 NVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
++++A+ L +M + ++D L V A +F +M K + V++N
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 174 AMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
++I G+ + A +L M R N+++++++I + G+ +EA +L++ ++K
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGSIES 288
+ P T S ++ L + + M+ K CF + V +LI+ + K ++
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVDE 414
Query: 289 ALAVFKAIANKKL-GH---WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
+ +F+ ++ + L G+ +T +I G D A +F +M G+ P +T+ +L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM---R 401
+ G V+ F+ + K+ P + Y +++ +C+AG ++ ++ S+ + +
Sbjct: 475 GLCNNGKVETALVVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 402 PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP-DATGCYTLLSNIYAAAG-KWDKVSH 459
PN V + +++S G E + + E P +G Y L + G K
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 460 VREMMKERGVLKDAGCSIVE---HRGKLNR 486
+REM R V + +V H G+L++
Sbjct: 594 IREMRSCRFVGDASTIGLVTNMLHDGRLDK 623
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 220/496 (44%), Gaps = 27/496 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V ++ ++S ++ + + L QM + + + +T +I R + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGYAR 119
++K+G+ D +SL+N + + A + +MV+ D ++N+LI G R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+ A+ L D M + D T+ +++GL K G ++ A + +M + V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+ +N A LF +M + N++++NS+I GR+ +A L ++
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P+ VT + + A L ++ M+K D D +SLI + ++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K + + +I G D+ +ELF EM + G+ + +T+ ++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
+ D F M+++ ++P + Y L+D LC G ++ A + E + M
Sbjct: 439 HGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 401 RPNKVIWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
P+ + ++ G +E G + + +L P+ T++S K + +
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 459 HVREMMKERGVLKDAG 474
RE MKE G L D+G
Sbjct: 558 LFRE-MKEEGPLPDSG 572
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 247/515 (47%), Gaps = 68/515 (13%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P +V+ + +++ Y H+ R ++A+ L QM P+ T +I G + E
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ ++ G D +VN K G+ LA + +KM ++ V+ +N++IDG
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK---SS 169
+ +++ A+ LF EM ++ + T+++L+ L G+ +A+R + D + +K
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
+++A+I+ ++K GK+ A +L+ +M R ++++++S+I+G+ ++ R EA ++FE
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE- 385
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCG 284
FMV KHCF D V +LI+ + K
Sbjct: 386 ----------------------------------FMVSKHCFP-DVVTYNTLIKGFCKYK 410
Query: 285 SIESALAVFKAIANKKL-GH---WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
+E + VF+ ++ + L G+ + +I GL G D A E+F EM G+ P+ +T+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
+L+ G +++ F+ + K+ PT+ Y +++ +C+AG ++ ++ ++ +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 401 ---RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWD 455
+P+ V + +++S G+ E + + E P+ +GCY L G +
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN-SGCYNTLIRARLRDGDRE 588
Query: 456 KVSHVREMMKERGVLKDAGC----SIVEHRGKLNR 486
+ + + M+ G DA + + H G+L++
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 241/545 (44%), Gaps = 39/545 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P+++ ++ ++S ++ + + L QM + + + +T +I R + +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGYAR 119
G ++K+G+ + SSL+N Y + A + D+M + V++N+LI G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+ AM L D M ++ D T+ +++GL K G + A + ++M + +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+G K ++ A LF +M + N+++++S+IS GR+ +A L ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P T + + A L ++ MVK D V +SLI + ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K + + +I G + ++ +E+F EM + G+ + +T+ ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
G D + F M+++ + P + Y L+D LC+ G L++A + E + M
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 401 RPNKVIWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
P + ++ G +E G + +L PD T++S + G ++
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKEEAD 556
Query: 459 HVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVP 518
+ + MKE G L ++GC R +L GD+ E+ K+++ G
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRD---GDREASA---------ELIKEMRSCGFAG 604
Query: 519 DTSQV 523
D S +
Sbjct: 605 DASTI 609
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 222/442 (50%), Gaps = 26/442 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+ P++V+ N +++ + H +R ++A+ L QM+ PD T ++ G + + E
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ ++ G D +++N K GE LA + +KM ++ DVV ++++ID
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK---SS 169
+ +V+ A+ LF EM ++ D FT+++L+ L G+ +A+R + D + +K +
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V++N++I+ + K GK+ A +LF +M R N++++NS+I+G+ ++ R EA ++F +
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ + +P VT + ++ + +G + M + + V T+LI + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 286 IESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
++A VFK + + + + ++ GL +G ++A+ +F +++ M+P T+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNII----ES 397
+ G V++G F ++ + P V Y ++ C+ G ++A + E
Sbjct: 491 MSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 398 MPMRPNKVIWMSLLSSSRNHGN 419
P+ P+ + +L+ + G+
Sbjct: 550 GPL-PDSGTYNTLIRAHLRDGD 570
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 215/442 (48%), Gaps = 26/442 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P++V+ + +++ Y H R +DA+ L QM+ PD T +I G + E
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ +++ G + +VN K G+ LA + +KM ++ DVV +N++ID
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
+ +V+ A+ LF EM ++ + T+++L+ L G+ A ++ M +K +
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V++NA+I+ ++K GK A +L+ M R ++ ++NS+++G+ ++ R +A ++FE
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ + P VT + + + +G + M D V T+LI+ G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 286 IESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
++A VFK + + + ++ ++ GL +G ++ALE+F M++ +K +
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM--- 398
++ G VD+G F ++ + P V Y ++ LC LQ+A +++ M
Sbjct: 511 MIEGMCKAGKVDDGWDLF-CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 399 -PMRPNKVIWMSLLSSSRNHGN 419
P+ PN + +L+ + G+
Sbjct: 570 GPL-PNSGTYNTLIRAHLRDGD 590
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 244/510 (47%), Gaps = 31/510 (6%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L ++N++I+C+ + + AL L +M+ P TL ++ G + + +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNG 121
++++G+ D ++L++ + A + D+MV R ++V++ +++G + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
+ ++A+ L ++M + D + ++D L K V+ A +F +M K + V+++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 174 AMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
++I+ G+ + A QL M + NL+++N++I + G+F+EA +L++ ++K
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGSIES 288
+ P T S ++ L + + FMV K CF D V +LI+ + K +E
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP-DVVTYNTLIKGFCKSKRVED 418
Query: 289 ALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
+F+ ++++ L +T +I GL G D A ++F +M G+ P +T+ +L+
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 345 ACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM---R 401
+ G +++ + FD M + +I + Y +++ +C+AG + ++ S+ + +
Sbjct: 479 GLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 402 PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP-DATGCYTLLSNIYAAAG-KWDKVSH 459
PN V + +++S + L+ + E P +G Y L + G K
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 460 VREMMKERGVLKDAGCSIVE---HRGKLNR 486
+REM R V + +V H G+L++
Sbjct: 598 IREMRSCRFVGDASTIGLVANMLHDGRLDK 627
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 238/546 (43%), Gaps = 58/546 (10%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHH-DLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYV 67
++L+I YV + R D +L+F+ M+ LLP+ TL ++ G + ++ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 68 LKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYARNGNV 123
+ +G D ++ + ++ + ++ A+++ M D ++V +N LIDG + V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 124 EVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQM------PKKSSVSWN 173
A+ + ++ + D T+ L+ GL K + E E+ D+M P +++VS
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS-- 336
Query: 174 AMINGYMKSGKI----NLARQL--FGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
+++ G K GKI NL +++ FG P NL +N++I +F EA LF+ +
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSP--NLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K GL P+ VT + L MV L SLI + K G I
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 288 SALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
+A + NKKL +T+++ G G ++AL L+ EM G+ P TF +L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR-- 401
+ GL+ + K F+ M E+ + P Y +++ C G + +A ++ M +
Sbjct: 515 SGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 402 -PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG-------CYTLLSNIYAAAGK 453
P+ + L+ HG G+ A+ + D G CYT L + + GK
Sbjct: 574 VPDTYSYRPLI-----HGLCLTGQ-ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 454 WDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKL 513
++ V + M +RGV D C V I G H K + L+EM +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGV--------LIDGSLKHKDRKLFFGLLKEMHDR--- 676
Query: 514 AGHVPD 519
G PD
Sbjct: 677 -GLKPD 681
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 216/493 (43%), Gaps = 60/493 (12%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P L +N +I + ++A LLF +M L P+ T +I R +
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGYAR 119
G ++ G + +SL+N + K+G++ A +M+++ VV++ SL+ GY
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
G + A++L+ EM + +T+T LL GL + G + A ++F++M K + V+
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVLL 227
+N MI GY + G ++ A + +M + ++ S+ +I G L G+ EA + L
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K GN C +L+ + T L+ + + G +E
Sbjct: 605 K-----------------------GN-----------C-ELNEICYTGLLHGFCREGKLE 629
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
AL+V + + + L + +I G H L EM G+KP + + ++
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM-PMR- 401
+A S G E +D+MINE VP Y +++ LC+AG + +A+ + M P+
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 402 -PNKVIWMSLLSS-SRNHGNLEIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSH 459
PN+V + L ++ +++ + +++ T Y +L + G+ ++ S
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 460 VREMMKERGVLKD 472
+ M GV D
Sbjct: 809 LITRMIGDGVSPD 821
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 197/439 (44%), Gaps = 24/439 (5%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+V +N++I + +A+ + + + DL PD T ++ G ++ + G ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGE----MGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
+L + F + SSLV K G+ + L ++V D V ++ +N+LID +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 122 NVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAR----EVFDQMPKKSSVSWN 173
A LFD M + T++ L+D + GK++ A E+ D K S +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLLKE 229
++ING+ K G I+ A +M + L +++ S++ GY G+ +A+ L+ + +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
G+ PS T + LS + ++ + + + M + + V +IE Y + G + A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 290 LAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
K + K + + +I GL + G A +A + + + + I + G+L+
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRP 402
+G ++E M+ + V YG L+D + + +++ M ++P
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLV-CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 403 NKVIWMSLLSSSRNHGNLE 421
+ VI+ S++ + G+ +
Sbjct: 681 DDVIYTSMIDAKSKTGDFK 699
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 158/358 (44%), Gaps = 24/358 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP V++N++I Y + A ++M ++PD ++ +I G E K
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ K ++ + L++ + + G++ A V +MV R D+V + LIDG
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
++ + ++ L EM R D +T+++D +K G + A ++D M + + V
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLN------GRFLEAMELFE 224
++ A+ING K+G +N A L +M + + N + G L+ +A+EL
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
+LK GL+ + T + + + + M+ D + T++I +
Sbjct: 778 AILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 285 SIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
++ A+ ++ ++ K + + +I G + G +A EL EM R G+ P+ T
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 242/516 (46%), Gaps = 70/516 (13%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P++V+ + +++ Y H R +DA+ L QM+ PD T +I G + E
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ +++ G + +VN K G++ LA + +KM ++ DVV +N++ID
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
+ +V+ A+ LF EM ++ + T+++L+ L G+ A ++ M +K +
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V++NA+I+ ++K GK A +L M R ++ ++NS+I+G+ ++ R +A ++FE
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE- 314
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMV-KHCF-DLDGVLGTSLIEMYSKC 283
FMV K CF DLD +LI+ + K
Sbjct: 315 ----------------------------------FMVSKDCFPDLDTY--NTLIKGFCKS 338
Query: 284 GSIESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
+E +F+ ++++ L +T +I GL G D A ++F +M G+ P +T+
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 340 IGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP 399
+L+ + G +++ + FD M + +I + Y +++ +C+AG + ++ S+
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 400 M---RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD---PDATGCYTLLSNIYAAAGK 453
+ +PN V + +++S + L+ YA ++ D PD+ TL+ K
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQ-EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 454 WDKVSHVREMMKERGVLKDAGCSIVE---HRGKLNR 486
+REM R V + +V H G+L++
Sbjct: 517 AASAELIREMRSCRFVGDASTIGLVANMLHDGRLDK 552
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 221/496 (44%), Gaps = 27/496 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++ +N ++S + + + L +M + + +T +I R + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G ++K+G+ SSL+N Y + A + D+MV+ D +++ +LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
+ A+ L D M R + T+ +++GL K G ++ A + ++M + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+ K ++ A LF +M + N+++++S+IS GR+ +A +L ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
++ + P+ VT + + A +H M+K D D SLI + ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K L + +I G + ELF EM G+ +T+ ++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPN 403
H G D K F M+++ + P + Y L+D LC G L++A + + M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 404 KV---IWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
K+ I+ +++ G ++ G + + +L P+ T++S + + + +
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 459 HVREMMKERGVLKDAG 474
+++ MKE G L D+G
Sbjct: 487 LLKK-MKEDGPLPDSG 501
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 196/430 (45%), Gaps = 23/430 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P V + +I +R N+AL L +M +PD T VI G + + E ++
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNV 123
+L GF D L+N K G + A+ +F ++ ++V +N+LI G+ +G +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 124 EVAMKLFDEMPSR-----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNA 174
+ A + +M + D T+ +L+ G K G V A EV M K + S+
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 175 MINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+++G+ K GKI+ A + +M N + +N +IS + R EA+E+F + ++G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
P T S +S + + + + W+ M+ + V +LI + + G I+ A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 291 A-----VFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
VF+ ++ + ++I GL G D+A LF +M R G P I+ ++N
Sbjct: 550 KLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRP 402
G+V+E + M+ P + + L++ LCRAG ++ + + + P
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 403 NKVIWMSLLS 412
+ V + +L+S
Sbjct: 668 DTVTFNTLMS 677
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 197/419 (47%), Gaps = 30/419 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+PT S+N+++ V + A +F ML + P FT V+K ++ +
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGYA 118
+ + K G + + +L++ +K + A ++ ++M D ++N +I G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNA 174
+ + A K+ + M R D T+ L++GL K G+V+AA+++F ++PK V +N
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 175 MINGYMKSGKINLARQLFGQMPGR-----NLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+I+G++ G+++ A+ + M ++ ++NS+I GY G A+E+ + +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTS-----LIEMYSKCG 284
G P+ + S V G L G+ ++ V + DG+ + LI + K
Sbjct: 419 GCKPN---VYSYTILVDGFCKL--GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 285 SIESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
I A+ +F+ + K + + ++I GL AL L +M G+ + +T+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVE-HYGCLVDILCRAGHLQQAKNIIESM 398
++NA +G + E K + M+ ++ P E Y L+ LCRAG + +A+++ E M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 139/275 (50%), Gaps = 20/275 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP V +N +IS + HR +A+ +FR+M PD +T +I G + ++
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ ++ G + ++L+N + + GE+ ARK+ ++MV + D +++NSLI G
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 119 RNGNVEVAMKLFDEM------PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS--- 169
R G V+ A LF++M PS + L++GL + G VE A E +M + S
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSN--ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 170 -VSWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFE 224
V++N++ING ++G+I +F ++ + +++N+++S G +A L +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
+++G +P+H T L ++ L R+ ++
Sbjct: 694 EGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNA 728
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 241/545 (44%), Gaps = 39/545 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V +N ++S ++ + + L +M + + D ++ +I R + +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGYAR 119
G ++K+G+ D SSL+N Y + A + D+M + V++N+LI G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
+ A+ L D M +R D FT+ +++GL K G ++ A + +M K V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ +I+ +N A LF +M + N++++NS+I GR+ +A L ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P+ VT + + A L ++ M+K D D +SLI + ++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K + + +I G ++ +ELF EM + G+ + +T+ ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
G D K F M+++ + P + Y L+D LC+ G L++A + E + M
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 401 RPNKVIWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
P+ + ++ G +E G + + +L P+ T++S K + +
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 459 HVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKAIYAKLREMSKKLKLAGHVP 518
RE MKE G L ++G R +L GDK A E+ K+++ G V
Sbjct: 557 LFRE-MKEDGTLPNSGTYNTLIRARLRD---GDK---------AASAELIKEMRSCGFVG 603
Query: 519 DTSQV 523
D S +
Sbjct: 604 DASTI 608
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 51/286 (17%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V++N +I C + R +DA L M+ + P+ T +I + + E ++
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGYA 118
++ ++K D F SSL+N + + A+ +F+ M+ +D VV++N+LI G+
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 119 RNGNVEVAMKLFDEMPSR---------------------------------------DAF 139
+ VE M+LF EM R D
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQM 195
T++ LLDGL K GK+E A VF+ + K ++N MI G K+GK+ LF +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
+ N+I + +MISG+ G EA LF + ++G +P+ T
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 175/399 (43%), Gaps = 61/399 (15%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHD-LLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
VS N+I+ + R DAL ++M + D PD +T ++ G + V+ +I
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-------------------- 105
+L+ G+ D + +S+++ K GE+ A +V D+M+ R
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 106 -------------------DVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWT 142
DV ++NSLI G N VAM+LF+EM S+ D FT+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 143 ALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMKSGKINLARQLFGQMP-- 196
L+D L GK++ A + QM +S +++N +I+G+ K+ K A ++F +M
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 197 --GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
RN +++N++I G + R +A +L + ++ EG P T S L+ +
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 255 RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVG 310
I M + + D V +LI K G +E A + ++I K + + +I G
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 311 LGMHGLADQALELFMEMRRIGMKP-----HAITFIGVLN 344
L +A+ LF EM P + I F G+ N
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 223/515 (43%), Gaps = 74/515 (14%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP + ++N++I H+ A+L+ M + L+PD T V++G
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG------------ 233
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDV----VSWNSLIDGYA 118
Y + G++ A ++ ++MV+ VS N ++ G+
Sbjct: 234 -----------------------YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 119 RNGNVEVAMKLFDEMPSRDAF-----TWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
+ G VE A+ EM ++D F T+ L++GL K G V+ A E+ D M ++
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
++N++I+G K G++ A ++ QM R N +++N++IS + EA EL V
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGR----WIHSFMVKHCFDLDGVLGTSLIEMYS 281
L +G++P T S + GL + N R K C + D LI+
Sbjct: 391 LTSKGILPDVCTF---NSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLC 446
Query: 282 KCGSIESALAVFKAI----ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
G ++ AL + K + + + + +I G +A E+F EM G+ +++
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
T+ +++ V++ + D MI E + P Y L+ CR G +++A +I+++
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 398 MPM---RPNKVIWMSLLSSSRNHGNLEIGEYAAHNL----IEADPDATGCYTLLSNIYAA 450
M P+ V + +L+S G +E+ ++ I P A ++ ++
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN--PVIQGLFRK 623
Query: 451 AGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLN 485
+ ++ REM+++ DA + RG N
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 66/395 (16%)
Query: 46 CVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD- 104
+I R V K+I G+G + S+L++ Y + G A VF+ M +
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 105 ---RDVVSWNSLIDGYARNG-NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEA 156
++V++N++ID + G + K FDEM D T+ +LL ++ G EA
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 157 AREVFDQMP----KKSSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMIS 208
AR +FD+M ++ S+N +++ K G+++LA ++ QMP + N++S++++I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 209 GYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL 268
G+ GRF EA+ LF G R++ L
Sbjct: 418 GFAKAGRFDEALNLF----------------------------GEMRYL-------GIAL 442
Query: 269 DGVLGTSLIEMYSKCGSIESALAVFKAIAN----KKLGHWTAIIVGLGMHGLADQALELF 324
D V +L+ +Y+K G E AL + + +A+ K + + A++ G G G D+ ++F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYK---IVPTVEHYGCLVDI 381
EM+R + P+ +T+ +++ S GL E + F E+K + V Y L+D
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF----REFKSAGLRADVVLYSALIDA 558
Query: 382 LCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSS 413
LC+ G + A ++I+ M + PN V + S++ +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 181/389 (46%), Gaps = 44/389 (11%)
Query: 3 KPTLVSWNLII-SCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+P LV++N +I +C F +M + + PD T ++ CSR + +
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM-VDR---DVVSWNSLIDGY 117
+ + D F ++L++ K G+M LA ++ +M V R +VVS++++IDG+
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 118 ARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSS 169
A+ G + A+ LF EM + D ++ LL K G+ E A ++ +M KK
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V++NA++ GY K GK + +++F +M NL++++++I GY G + EAME+F
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEM------ 279
GL V + + A+ ++G+ + M K + V S+I+
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 280 ------YSKCGSIESALAVFKAIANKKLGHWTAIIVGL--------------GMHGLADQ 319
YS GS+ + + A+ + + L GM L+
Sbjct: 600 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELS-C 658
Query: 320 ALELFMEMRRIGMKPHAITFIGVLNACSH 348
LE+F +M ++ +KP+ +TF +LNACS
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 166/359 (46%), Gaps = 62/359 (17%)
Query: 80 SSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPS 135
S++++ ++G++ +A+++F+ V ++++LI Y R+G E A+ +F+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 136 ----RDAFTWTALLDGLAKCG-KVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKIN 186
+ T+ A++D K G + + + FD+M + +++N+++ + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 187 LARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSAL 242
AR LF +M R ++ S+N+++ G+ A E+ + + +MP+ V+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY---- 412
Query: 243 SAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFK-----AIA 297
+++I+ ++K G + AL +F IA
Sbjct: 413 -------------------------------STVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 298 NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNK 357
++ + T + + + G +++AL++ EM +G+K +T+ +L +G DE K
Sbjct: 442 LDRVSYNTLLSIYTKV-GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 358 CFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI---IESMPMRPNKVIWMSLLSS 413
F M E+ ++P + Y L+D + G ++A I +S +R + V++ +L+ +
Sbjct: 501 VFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 274 TSLIEMYSKCGSIESALAVFKAIAN----KKLGHWTAIIVGLGMHGLA-DQALELFMEMR 328
++LI Y + G E A++VF ++ L + A+I G G+ Q + F EM+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 329 RIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHL 388
R G++P ITF +L CS GL + FD M N +I V Y L+D +C+ G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQM 390
Query: 389 QQAKNIIESMPMR---PNKVIWMSLLSSSRNHGNLE--IGEYAAHNLIEADPDATGCYTL 443
A I+ MP++ PN V + +++ G + + + + D TL
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 444 LSNIYAAAGKWDKVSHVREMMKERGVLKD 472
LS IY G+ ++ + M G+ KD
Sbjct: 451 LS-IYTKVGRSEEALDILREMASVGIKKD 478
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 186/404 (46%), Gaps = 21/404 (5%)
Query: 28 LFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYA 87
M++H +PD +I+G RL ++ +I + G D + +++ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 88 KWGEMGLARKVFDKM-VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAF----TWT 142
K GE+ A V D+M V DVV++N+++ +G ++ AM++ D M RD + T+T
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGKINLARQLFGQMPGR 198
L++ + V A ++ D+M + V++N ++NG K G+++ A + MP
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 199 ----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG 254
N+I+ N ++ GR+++A +L +L++G PS VT ++ + +LG
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 255 RWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK----KLGHWTAIIVG 310
I M +H + + L+ + K ++ A+ + + ++ + + ++
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
L G + A+E+ ++ G P IT+ V++ + G + K D M + P
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKP 482
Query: 371 TVEHYGCLVDILCRAGHLQQAKNI---IESMPMRPNKVIWMSLL 411
Y LV L R G + +A E M +RPN V + S++
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 196/422 (46%), Gaps = 68/422 (16%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P ++++N++IS Y N+AL + +M + PD T +++ +++ ++
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+L+ D + L+ + +G A K+ D+M DR DVV++N L++G +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 120 NGNVEVAMKLFDEMPS----------------------------------RDAF-----T 140
G ++ A+K ++MPS R F T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 141 WTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMP 196
+ L++ L + G + A ++ ++MP+ +S+S+N +++G+ K K++ A + +M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 197 GR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLG 252
R +++++N+M++ +G+ +A+E+ L +G P +++ + + GLA G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP---VLITYNTVIDGLAKAG 463
Query: 253 -NGRWIHSFMVKHCFDL--DGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG------H 303
G+ I DL D + +SL+ S+ G ++ A+ F +++G
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF--ERMGIRPNAVT 521
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
+ +I++GL D+A++ + M G KP+ ++ ++ +++G+ E + + +
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 364 NE 365
N+
Sbjct: 582 NK 583
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 156/346 (45%), Gaps = 49/346 (14%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V++N++++ R ++A+ M P+ T +++ + +++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYAR 119
+L+ GF + L+N + G +G A + +KM + +S+N L+ G+ +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----VS 171
++ A++ + M SR D T+ +L L K GKVE A E+ +Q+ K ++
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +I+G K+GK A +L +M ++L I+++S++ G G+ EA++ F
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK-CGSI 286
+ G+ P+ VT S + LG S D L+ M ++ C
Sbjct: 512 RMGIRPNAVTFNSIM--------LG---LCKSRQTDRAIDF-------LVFMINRGCKPN 553
Query: 287 ESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
E++ +T +I GL G+A +ALEL E+ G+
Sbjct: 554 ETS--------------YTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 121/245 (49%), Gaps = 16/245 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V++N++I+ A+ + +M H P+ + ++ G + + +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGYAR 119
++ G D ++++ K G++ A ++ +++ + ++++N++IDG A+
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 120 NGNVEVAMKLFDEMPSRD----AFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
G A+KL DEM ++D T+++L+ GL++ GKV+ A + F + + ++V+
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+N+++ G KS + + A M R N S+ +I G G EA+EL L
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 228 KEGLM 232
+GLM
Sbjct: 582 NKGLM 586
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 189/416 (45%), Gaps = 21/416 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P L+ ++ + S + + L L +QM + + +TL +I C R +
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
G ++K+G+ D S+L+N G + A ++ D+MV+ +++ N+L++G
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
NG V A+ L D M + T+ +L + K G+ A E+ +M ++ +V
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVL 226
++ +I+G K G ++ A LF +M + ++I + ++I G+ GR+ + +L +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
+K + P V + + L +H M++ D V TSLI+ + K +
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 287 ESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGV 342
+ A + + +K G + +I G L D LELF +M G+ +T+ +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 343 LNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
+ G ++ + F M++ ++ P + Y L+D LC G ++A I E +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 186/421 (44%), Gaps = 29/421 (6%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
HKPTL++ N +++ N + +DA+LL +M+ P+ T V+K +
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
++ + + D S +++ K G + A +F++M D++ + +LI G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
G + KL +M R D ++AL+D K GK+ A E+ +M ++ +
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEV 225
V++ ++I+G+ K +++ A + M G N+ ++N +I+GY + +ELF
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ G++ VT + + L L + + MV D V L++ G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 286 IESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
E AL +F+ I K+ G + II G+ D A +LF + G+KP T+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA----GHLQQAKNIIES 397
++ KG + E + F M E P GC +IL RA G ++ +IE
Sbjct: 533 MIGGLCKKGSLSEADLLFRKM-EEDGHSPN----GCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 398 M 398
+
Sbjct: 588 I 588
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 131/322 (40%), Gaps = 19/322 (5%)
Query: 167 KSSVSWNAMINGYMKSGKINLARQLFGQM----PGRNLISWNSMISGYQLNGRFLEAMEL 222
K VS+ + + K + A LF +M P LI ++ + S ++ ++L
Sbjct: 35 KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDL 94
Query: 223 FEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
+ + +G+ + T+ ++ L ++K ++ D V ++LI
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 283 CGSIESALAVFKAIANKKLGH------WTAIIVGLGMHGLADQALELFMEMRRIGMKPHA 336
G + AL + + ++GH A++ GL ++G A+ L M G +P+
Sbjct: 155 EGRVSEALELVDRMV--EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 337 ITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
+T+ VL G + M E KI Y ++D LC+ G L A N+
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 397 SMPMRPNK---VIWMSLLSSSRNHGNLEIGEYAAHNLI--EADPDATGCYTLLSNIYAAA 451
M ++ K +I+ +L+ G + G ++I + PD ++ L + +
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA-FSALIDCFVKE 330
Query: 452 GKWDKVSHVREMMKERGVLKDA 473
GK + + + M +RG+ D
Sbjct: 331 GKLREAEELHKEMIQRGISPDT 352
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 223/495 (45%), Gaps = 42/495 (8%)
Query: 9 WNLIISCYVHNHR---SNDALLLFRQMLHHDLLPDGFTLP-----CVIKGCSRLHAVQEG 60
++L+I YV + +++A L R GFT+ +I R+ V+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRS--------KGFTVSIDACNALIGSLVRIGWVELA 219
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEM----GLARKVFDKMVDRDVVSWNSLIDG 116
++ + + G G + + + +VN K G+M +V +K V D+V++N+LI
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 117 YARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----S 168
Y+ G +E A +L + MP S +T+ +++GL K GK E A+EVF +M +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 169 SVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFE 224
S ++ +++ K G + ++F M R +L+ ++SM+S + +G +A+ F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 225 VLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCG 284
+ + GL+P +V + ++ + + M++ +D V +++ K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 285 SIESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
+ A +F + + L T +I G G A+ELF +M+ ++ +T+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM-- 398
+L+ G +D + + M+++ +I+PT Y LV+ LC GHL +A + + M
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 399 -PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWD 455
++P +I S++ GN GE +I PD TL+
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 456 KVSHVREMMKERGVL 470
V++M +E+G L
Sbjct: 639 AFGLVKKMEEEQGGL 653
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 198/488 (40%), Gaps = 48/488 (9%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V++N +IS Y +A L M P +T VI G + + K++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVS----WNSLIDGYAR 119
+L+ G D SL+ K G++ KVF M RDVV ++S++ + R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAM 175
+GN++ A+ F+ + D +T L+ G + G + A
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA------------------ 429
Query: 176 INGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSH 235
+NL ++ Q +++++N+++ G EA +LF + + L P
Sbjct: 430 ---------MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 236 VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKA 295
T+ + L L N + M + LD V +L++ + K G I++A ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 296 IANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGL 351
+ +K++ ++ ++ L G +A ++ EM +KP + ++ G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 352 VDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP-----MRPNKVI 406
+G + MI+E VP Y L+ R ++ +A +++ M + P+
Sbjct: 601 ASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 407 WMSLLSSSRNHGNLEIGEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDKVSHVREMM 464
+ S+L ++ E +IE +PD + YT + N + + + + + M
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS-TYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 465 KERGVLKD 472
+RG D
Sbjct: 719 LQRGFSPD 726
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 145/320 (45%), Gaps = 33/320 (10%)
Query: 166 KKSSVSWNAMINGYMKSGKINLARQLFGQMPGRNLISW----NSMISGYQLNGRFLEAME 221
K +S+S +AMI+ ++SG+++ A+ +M R+ +S NS+ S + G
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCG---SNDS 166
Query: 222 LFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
+F++L++ ++V A +L + + S + C L G L
Sbjct: 167 VFDLLIR-----TYVQARKLREAHEAFTLLRSKGFTVS--IDACNALIGSL--------V 211
Query: 282 KCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAI 337
+ G +E A V++ I+ +G ++ L G ++ +++ G+ P +
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIES 397
T+ +++A S KGL++E + + M + P V Y +++ LC+ G ++AK +
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 398 M---PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAG 452
M + P+ + SLL + G++ E ++ D PD C++ + +++ +G
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV-CFSSMMSLFTRSG 389
Query: 453 KWDKVSHVREMMKERGVLKD 472
DK +KE G++ D
Sbjct: 390 NLDKALMYFNSVKEAGLIPD 409
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 195/413 (47%), Gaps = 65/413 (15%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +VS+N ++ + + A ++F +L L P+ +T +I GC R H Q ++
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-----DVVSWNSLIDGYA 118
++ + V +++N K G+ AR++ M++ +S+NS+IDG+
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 119 RNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----V 170
+ G ++ A+ ++EM S + T+T+L++GL K +++ A E+ D+M K
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 171 SWNAMINGYMKSGKINLARQLFGQM------PGRNLISWNSMISGYQLNGRFLEAMELFE 224
++ A+I+G+ K + A LF ++ P + + +NS+ISG++ G + A++L++
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI--YNSLISGFRNLGNMVAALDLYK 713
Query: 225 VLLKEGL---MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
+LK+GL + ++ T++ L L +G I L + L
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGL--------LKDGNLI--------------LASELYTEMQ 751
Query: 282 KCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
G + + +T I+ GL G + +++F EM++ + P+ + +
Sbjct: 752 AVGLVPDEII------------YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 799
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILC--RAGHLQQAK 392
V+ +G +DE + D M+++ I+P G DIL + G+LQ +
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDK-GILPD----GATFDILVSGQVGNLQPVR 847
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 208/447 (46%), Gaps = 64/447 (14%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P V+++++I + N AL +++M L P F + +I+G + +E ++
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+ G + FV +++++ K G+ A ++ KM R +VVS+N+++ G+ R
Sbjct: 432 FDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDG---------------------------- 147
N+++A +F + + + +T++ L+DG
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 148 -------LAKCGKVEAAREVFDQMPKK-----SSVSWNAMINGYMKSGKINLARQLFGQM 195
L K G+ ARE+ M ++ S +S+N++I+G+ K G+++ A + +M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGL---MPSHVTILSALSAVSGL 248
G N+I++ S+++G N R +A+E+ + + +G+ +P++ ++ S +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 249 AVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK----KLGHW 304
+ + S +++ + + SLI + G++ +AL ++K + LG +
Sbjct: 671 E---SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 305 TAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN 364
T +I GL G A EL+ EM+ +G+ P I + ++N S KG + K F+ M
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM-K 786
Query: 365 EYKIVPTVEHYGCLVDILCRAGHLQQA 391
+ + P V Y ++ R G+L +A
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 216/503 (42%), Gaps = 63/503 (12%)
Query: 28 LFRQMLHHDL-LPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMY 86
L R+M L +P T VI + + + ++ +L G + +SL+ +
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 87 AKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDA 138
K ++ A +FDKM + V+++ LI+ + +NG +E A++ + +M +
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 139 FTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS---WNAMINGYMKSGKINLARQLFGQM 195
F ++ G K K E A ++FD+ + + N +++ K GK + A +L +M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVL 251
R N++S+N+++ G+ A +F +L++GL P++ T +
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 252 GNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF-KAIANKKLG----HWTA 306
N + + M +++GV+ ++I K G A + I K+L + +
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEY 366
II G G D A+ + EM G+ P+ IT+ ++N +D+ + D M N+
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK- 648
Query: 367 KIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSLLSSSRNHGNL--- 420
+ + YG L+D C+ +++ A + + + P++ I+ SL+S RN GN+
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 421 --------------EIGEYAA--------HNLIEAD------------PDATGCYTLLSN 446
++G Y NLI A PD YT++ N
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI-IYTVIVN 767
Query: 447 IYAAAGKWDKVSHVREMMKERGV 469
+ G++ KV + E MK+ V
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNV 790
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 200/473 (42%), Gaps = 60/473 (12%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSR-LHAVQEGKQIHG 65
V+ L++ + + +AL + + + PD ++ C + L +
Sbjct: 234 VTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLRE 293
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYARNG 121
K + +S++ K G M A ++ D+M + +VV+ SLI G+ +N
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 122 NVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWN 173
++ A+ LFD+M PS ++ T++ L++ K G++E A E + +M S +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 174 AMINGYM----------------------------------KSGKINLARQLFGQMPGR- 198
+I G++ K GK + A +L +M R
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 199 ---NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
N++S+N+++ G+ A +F +L++GL P++ T + N
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVF-KAIANKKLG----HWTAIIVG 310
+ + M +++GV+ ++I K G A + I K+L + +II G
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVP 370
G D A+ + EM G+ P+ IT+ ++N +D+ + D M N+ +
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-GVKL 652
Query: 371 TVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSLLSSSRNHGNL 420
+ YG L+D C+ +++ A + + + P++ I+ SL+S RN GN+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 181/465 (38%), Gaps = 73/465 (15%)
Query: 71 GFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSW--------------NSLIDG 116
GF + + L+N Y+K + A + ++M++ DV+ + NSL +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 117 ---YAR---------NGNVEVAMK--LFDEMPSR---------------DAFTWTALLDG 147
Y+R N ++ M+ L +E P+ D+ ++ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 148 LAKCGKVEAAREVFDQMPKK-----SSVSWNAMINGYMKSGKINLARQLFGQMPGR---- 198
K + A + +M +K S ++ ++I +K G ++ A +L +M
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 199 NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIH 258
N+++ S+I+G+ N + A+ LF+ + KEG P+ VT + NG
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR-----KNGEMEK 392
Query: 259 SFMVKHCFDLDGVLGT-----SLIEMYSKCGSIESALAVFKAIANKKLGH---WTAIIVG 310
+ ++ G+ + ++I+ + K E AL +F L + I+
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW 452
Query: 311 LGMHGLADQALELFMEMRRIGMKPHAITFIGV-LNACSHKGLVDEGNKCFDMMINEYKIV 369
L G D+A EL +M G+ P+ +++ V L C K + D F ++ E +
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM-DLARIVFSNIL-EKGLK 510
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGEYA 426
P Y L+D R Q A ++ M + N V++ ++++ G
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 427 AHNLIEADPDATGC--YTLLSNIYAAAGKWDKVSHVREMMKERGV 469
N+IE C Y + + + G+ D E M G+
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 220/457 (48%), Gaps = 59/457 (12%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P++V+ + +++ Y H R +DA+ L QM+ PD T +I G + E
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
+ +++ G + +VN K G++ LA + +KM ++ +VV ++++ID
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK---SS 169
+ + + A+ LF EM ++ + T+++L+ L + +A+R + D + +K +
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V++NA+I+ ++K GK+ A +L+ +M R ++ +++S+I+G+ ++ R EA +FE+
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ + P+ VT +LI + K
Sbjct: 391 MISKDCFPNVVTY-----------------------------------NTLINGFCKAKR 415
Query: 286 IESALAVFKAIANKKL-GH---WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
I+ + +F+ ++ + L G+ +T +I G D A +F +M G+ P+ +T+
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM- 400
+L+ G +++ F+ + K+ PT+ Y +++ +C+AG ++ ++ S+ +
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 401 --RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEADP 435
+P+ +I+ +++S G E + + E P
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 219/496 (44%), Gaps = 27/496 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++ +N ++S + + + L +M + + +T +I R + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGYAR 119
G ++K+G+ SSL+N Y + A + D+MV+ D +++ +LI G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
+ A+ L D M R + T+ +++GL K G ++ A + ++M + + V
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
++ +I+ K + A LF +M + N+I+++S+IS R+ +A L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ + P+ VT + + A L ++ M+K D D +SLI + ++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F+ + +K + + +I G D+ +ELF EM + G+ + +T+ ++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
+ D F M+++ + P + Y L+D LC+ G L++A + E + M
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 401 RPNKVIWMSLLSSSRNHGNLEIG--EYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVS 458
P + ++ G +E G + + +L PD T++S + G ++
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG-FCRKGLKEEAD 560
Query: 459 HVREMMKERGVLKDAG 474
+ M+E G L D+G
Sbjct: 561 ALFRKMREDGPLPDSG 576
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 51/286 (17%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +++++ +ISC + R +DA L M+ + P+ T +I + + E ++
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGYA 118
++ ++K D F SSL+N + + A+ +F+ M+ +D VV++N+LI+G+
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 119 RNGNVEVAMKLFDEMPSR---------------------------------------DAF 139
+ ++ ++LF EM R +
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQM 195
T+ LLDGL K GK+E A VF+ + + + ++N MI G K+GK+ LF +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
+ ++I +N+MISG+ G EA LF + ++G +P T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 57/359 (15%)
Query: 65 GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARN 120
G ++K+GF D +SL+N + M A + ++MV+ DVV + ++ID +N
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSW 172
G+V A+ LFD+M + D +T+L++GL G+ A + M K+ +++
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 173 NAMINGYMKSGKINLARQLFGQM----PGRNLISWNSMISGYQLNGRFLEAMELFEVLLK 228
NA+I+ ++K GK A +L+ +M N+ ++ S+I+G+ + G EA ++F ++
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIES 288
+G P D V TSLI + KC ++
Sbjct: 311 KGCFP-----------------------------------DVVAYTSLINGFCKCKKVDD 335
Query: 289 ALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLN 344
A+ +F ++ K L +T +I G G G + A E+F M G+ P+ T+ +L+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 345 ACSHKGLVDEGNKCF-DMMINEYK-IVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMR 401
+ G V + F DM E + P + Y L+ LC G L++A + E M R
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 176/353 (49%), Gaps = 23/353 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP +V + II N N AL LF QM ++ + PD ++ G ++
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ + K D ++L++ + K G+ A +++++M+ ++ ++ SLI+G+
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSV 170
G V+ A ++F M ++ D +T+L++G KC KV+ A ++F +M +K +++
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVL 226
++ +I G+ + GK N+A+++F M R N+ ++N ++ NG+ +A+ +FE +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 227 LK---EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
K +G+ P+ T L + L + M K D+ + T +I+ K
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 284 GSIESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
G +++A+ +F ++ +K + +T +I GL GL +A LF +M+ G+
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 182/385 (47%), Gaps = 27/385 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V++ +I+ + +R +A+ + QM+ + PD +I + V
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMY---AKWGEM-GLARKVFDKMVDRDVVSWNSLIDGYA 118
+ + G D + +SLVN +W + L R + + + DV+++N+LID +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 119 RNGNVEVAMKLFDEM----PSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----V 170
+ G A +L++EM + + FT+T+L++G G V+ AR++F M K V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVL 226
++ ++ING+ K K++ A ++F +M + N I++ ++I G+ G+ A E+F +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGV---LGTSLIEMYSKC 283
+ G+ P+ T L + + I M K ++DGV + T + ++ C
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR--EMDGVAPNIWTYNVLLHGLC 436
Query: 284 --GSIESALAVFKAIANKKLGHWTAIIV----GLGMHGLADQALELFMEMRRIGMKPHAI 337
G +E AL VF+ + +++ G+ G A+ LF + G+KP+ +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 338 TFIGVLNACSHKGLVDEGNKCFDMM 362
T+ +++ +GL E + F M
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKM 521
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 31/311 (9%)
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL----AVLGNGRWIHSFMVKHCFDLDG 270
+F EA++LF +++ +PS + L+ ++ + V+ + V H
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH------ 105
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGH------WTAIIVGLGMHGLADQALELF 324
L T + M C S + LA KLG +T++I G + ++A+ +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 325 MEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCR 384
+M +G+KP + + ++++ G V+ FD M N Y I P V Y LV+ LC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCN 224
Query: 385 AGHLQQAKNIIESMPMR---PNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATG 439
+G + A +++ M R P+ + + +L+ + G E + +I P+
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKA 499
YT L N + G D+ + +M+ +G D +V + +N F K K
Sbjct: 285 -YTSLINGFCMEGCVDEARQMFYLMETKGCFPD----VVAYTSLINGFCKCKKVDDAMKI 339
Query: 500 IYAKLREMSKK 510
Y EMS+K
Sbjct: 340 FY----EMSQK 346
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 212/513 (41%), Gaps = 73/513 (14%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V + +I ++ N R DA+ + ++M + PD F +I G S+ + E +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 63 --------------------IHGYVLKIGFG-FDKFVQ--------------SSLVNMYA 87
I GY+ F DK+V+ + L+N Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 88 KWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAF 139
K G++ A + MVD+ D ++ L++G +N V+ A ++F EM + D F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 140 TWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQM 195
++ L++G +K G ++ A +FD+M ++ + + +N ++ G+ +SG+I A++L +M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 196 PGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVL 251
+ N +++ ++I GY +G EA LF+ + +GL+P + + L +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 252 GNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH-------- 303
I K C +LI K G E V + +
Sbjct: 749 ERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 304 WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
+ +I L G + A ELF +M+ + P IT+ +LN G E FD I
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV---------IWMSLLSSS 414
I P Y +++ + G +A +++ M N V +LLS
Sbjct: 868 AA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGF 925
Query: 415 RNHGNLEIGEYAAHNLIEAD--PDATGCYTLLS 445
G +E+ E N++ PD+ L++
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 197/457 (43%), Gaps = 65/457 (14%)
Query: 25 ALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVN 84
AL L M+ L+P +T +I G ++ +++ K + + +G D S L++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 85 MYAKWGEMGLARKVFDKMVDRDV----VSWNSLIDGYARNGNVEVAMKLFDEMPSR---- 136
K A+ + +MV + ++ I ++ G +E A LFD M +
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 137 DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLF 192
A + +L++G + V E+ +M K+ S ++ ++ G SG ++ A +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 193 GQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL 248
+M N++ + ++I + N RF +AM + + + ++G+ P I S + GL
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD---IFCYNSLIIGL 497
Query: 249 AVLGNGRWIHSFMV-------------------------------------KHCFDL-DG 270
+ SF+V + C L +
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFME 326
VL T LI Y K G + A + ++++ ++ + +T ++ GL + D A E+F E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 327 MRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAG 386
MR G+ P ++ ++N S G + + + FD M+ E + P V Y L+ CR+G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSG 676
Query: 387 HLQQAKNIIESMPMR---PNKVIWMSLLSSSRNHGNL 420
+++AK +++ M ++ PN V + +++ G+L
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 111/545 (20%), Positives = 209/545 (38%), Gaps = 157/545 (28%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRDVV----SWNSLIDGYARNGNVEV------------ 125
L++ +W + L V+ MV+R+VV +++ LI + R GNV++
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 126 ---------AMKLFDEMPSRD----AFTWTALLDGLAKCGKVEAAREVFDQMP----KKS 168
A+KL + M + +T+ L+DGL K ++E A+ + +M
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 169 SVSWNAMING--------------------------YM---------KSGKINLARQLFG 193
+ +++ +I+G YM K G + A+ LF
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 194 QMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLA 249
M LI ++ S+I GY + EL + K ++ S T + + +
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 250 VLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH----WT 305
L I M+ + V+ T+LI+ + + A+ V K + + + +
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 306 AIIVGLGMHGLADQALELFMEMRRIGMKPHAITF-------------------------- 339
++I+GL D+A +EM G+KP+A T+
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 340 ---------IGVLN----------ACS-HKGLVDEG----NKCFDMMIN----------- 364
G++N ACS ++ +VD+G K + +++N
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 365 -----EYK---IVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSS 413
E + I P V YG L++ + G++Q+A +I + M + PN +I+ LL
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 414 SRNHGNLE-----IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
G +E + E + L P+A T++ Y +G + + + MK +G
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGL---HPNAVTYCTIIDG-YCKSGDLAEAFRLFDEMKLKG 727
Query: 469 VLKDA 473
++ D+
Sbjct: 728 LVPDS 732
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 200/433 (46%), Gaps = 29/433 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P+ ++ N ++ V A +F +M ++PD + ++ GC R +QE +
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGYAR 119
+++ GF D + ++ + G + A F KM+D +++++ SLIDG +
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSV----- 170
G+++ A ++ +EM + +T TAL+DGL K G E A +F ++ + +
Sbjct: 300 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVL 226
++ +MI GY K K+N A LF +M + L ++ ++I+G+ G F A EL ++
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSI 286
EG MP+ T +A+ ++ + + + + DGV T LI+ K I
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 287 ESALAVFKAI------ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFI 340
ALA F + A+ +L + +I ++ LF + +G+ P T+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNN--ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 341 GVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPM 400
+++ +G +D K F M + VP YG L+ LC+ + +A + E+M
Sbjct: 538 SMISCYCKEGDIDLALKYFHNM-KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596
Query: 401 R---PNKVIWMSL 410
R P +V ++L
Sbjct: 597 RGLSPPEVTRVTL 609
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 20/254 (7%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+KP + ++ +I Y + N A +LF +M L P+ T +I G + +
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
++ + GF + + ++ ++ K A ++ +K ++ D V++ LI
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFD------QMPKK 167
+ ++ A+ F M D L+ + K++ + +F +P K
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELF 223
++ +MI+ Y K G I+LA + F M + ++ S+ISG EA +L+
Sbjct: 534 E--TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 224 EVLLKEGLMPSHVT 237
E ++ GL P VT
Sbjct: 592 EAMIDRGLSPPEVT 605
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 42/280 (15%)
Query: 144 LLDGLAKCGKV-EAAREVFD---QMPKKSSVSWNAMINGYMKSGKINLARQLFGQMPGRN 199
+L ++ G++ EA V D Q SS++ N ++ ++ G I A +F +M R
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 200 LI----SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGR 255
++ S+ M+ G +G+ EA +++ G +P + T L+A+ ++
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHG 315
W M+ F + + TSLI+ K GSI+
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIK---------------------------- 304
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY 375
QA E+ EM R G KP+ T +++ +G ++ + F ++ P V Y
Sbjct: 305 ---QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 376 GCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLS 412
++ C+ L +A+ + M + PN + +L++
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 219/487 (44%), Gaps = 61/487 (12%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P ++++ +++ + R ++A+ L +M+ PD T+ +I G V E
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGY 117
+ +++ GF D+ ++N K G LA +F KM +R+ VV ++ +ID
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK----VEAAREVFDQMPKKSS 169
++G+ + A+ LF+EM + D T+++L+ GL GK + RE+ +
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEV 225
V+++A+I+ ++K GK+ A++L+ +M R + I++NS+I G+ EA ++F++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ +G P VT + LI Y K
Sbjct: 376 MVSKGCEPDIVTY-----------------------------------SILINSYCKAKR 400
Query: 286 IESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
++ + +F+ I++K L + +++G G + A ELF EM G+ P +T+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 342 VLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP-- 399
+L+ G +++ + F+ M + ++ + Y ++ +C A + A ++ S+
Sbjct: 461 LLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 400 -MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDK 456
++P+ V + ++ G+L + + E PD L+ +G
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 457 VSHVREM 463
V + EM
Sbjct: 580 VELIEEM 586
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 187/415 (45%), Gaps = 21/415 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
PT + +N + S + + L + M + + D +T+ +I R + +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G K+G+ D S+LVN + G + A + D+MV+ D+V+ ++LI+G
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVS 171
G V A+ L D M D T+ +L+ L K G A ++F +M K S V
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
++ +I+ K G + A LF +M + ++++++S+I G +G++ + ++ ++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
++P VT + + L + +++ M+ D + SLI+ + K +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A +F + +K + ++ +I D + LF E+ G+ P+ IT+ ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
G ++ + F M++ + P+V YG L+D LC G L +A I E M
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 205/415 (49%), Gaps = 21/415 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++V +N ++S V + + + L ++M + D +T VI V I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGYAR 119
G +LK+G+ D+ SLVN + + + A + DKMV+ D+V++N++ID +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKKSS---VS 171
V A F E+ + + T+TAL++GL + +AAR + D + KK + ++
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 172 WNAMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEVLL 227
++A+++ ++K+GK+ A++LF +M ++++++S+I+G L+ R EA ++F++++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+G + V+ + ++ + +G + M + + V +LI+ + + G ++
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 288 SALAVFKAI----ANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A F + + + + ++ GL +G ++AL +F +M++ M +T+ V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
G V+E F ++ + P + Y ++ LC G L + + + M
Sbjct: 443 RGMCKTGKVEEAWSLF-CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 190/384 (49%), Gaps = 28/384 (7%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
L ++N++I+C+ + + AL + +ML PD T+ ++ G R + V + +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-----DVVSWNSLIDGYARN 120
+++IG+ D +++++ K + A F K ++R +VV++ +L++G +
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF-KEIERKGIRPNVVTYTALVNGLCNS 238
Query: 121 GNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS----VSW 172
A +L +M + + T++ALLD K GKV A+E+F++M + S V++
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 173 NAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLK 228
+++ING +I+ A Q+F M + +++S+N++I+G+ R + M+LF + +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 229 EGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVK-HCFDLDGVLGTSLIEMYSKC--GS 285
GL+ + VT + + G G+ F + F + + T I + C G
Sbjct: 359 RGLVSNTVTYNTL---IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 286 IESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+E AL +F+ + +++ +T +I G+ G ++A LF + G+KP +T+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 342 VLNACSHKGLVDEGNKCFDMMINE 365
+++ KGL+ E + M E
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQE 499
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 20/358 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P V+ +++ + +R +DA+ L +M+ PD +I + V +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 62 QIHGYVLKIGFGFDKFVQSSLVN---MYAKWGEMG-LARKVFDKMVDRDVVSWNSLIDGY 117
+ + G + ++LVN ++W + L + K + +V+++++L+D +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 118 ARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS---- 169
+NG V A +LF+EM D T+++L++GL +++ A ++FD M K
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNLIS----WNSMISGYQLNGRFLEAMELFEV 225
VS+N +ING+ K+ ++ +LF +M R L+S +N++I G+ G +A E F
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ G+ P T L + L I M K DLD V T++I K G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 286 IESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITF 339
+E A ++F +++ K L +T ++ GL GL + L+ +M++ G+ + T
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 24/322 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+P +V++ +++ ++ R +DA L M+ + P+ T ++ + V E K+
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ ++++ D SSL+N + A ++FD MV + DVVS+N+LI+G+
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSV 170
+ VE MKLF EM R + T+ L+ G + G V+ A+E F QM
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 171 SWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVL 226
++N ++ G +G++ A +F M R +++++ ++I G G+ EA LF L
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 227 LKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS------FMVKHCFDLDG--VLGTSLIE 278
+GL P VT + +S + +L +++ M C DG L LI+
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521
Query: 279 MYSKCGSIESALAVFKAIANKK 300
CG S L K+ KK
Sbjct: 522 KMLSCGYAPSLLKDIKSGVCKK 543
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 162/378 (42%), Gaps = 50/378 (13%)
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFD 162
+V +N L+ + +V + L +M D +T+ +++ C +V A +
Sbjct: 85 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 144
Query: 163 QMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNG 214
+M K V+ +++NG+ + +++ A L +M +++++N++I
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGT 274
R +A + F+ + ++G+ P+ VT + ++ + + + + S M+K + + +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 275 SLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
+L++ + K G + +A ELF EM R+ + P
Sbjct: 265 ALLDAFVKNGKVL-------------------------------EAKELFEEMVRMSIDP 293
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI 394
+T+ ++N +DE N+ FD+M+++ + V Y L++ C+A ++ +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV-SYNTLINGFCKAKRVEDGMKL 352
Query: 395 IESMPMR---PNKVIWMSLLSSSRNHGNLEIGE--YAAHNLIEADPDATGCYTLLSNIYA 449
M R N V + +L+ G+++ + ++ + PD Y +L
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD-IWTYNILLGGLC 411
Query: 450 AAGKWDKVSHVREMMKER 467
G+ +K + E M++R
Sbjct: 412 DNGELEKALVIFEDMQKR 429
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 37/311 (11%)
Query: 218 EAMELFEVLLKEGLMPSHVTILSALSAVSGL----AVLGNGRWIHSFMVKHCFDLDGVLG 273
+A++LF ++K PS V LSA+ L V+ G+ + +++ D
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN----DLYTF 123
Query: 274 TSLIEMYSKCGSIESALAVFKAIANKKLGHWT------AIIVGLGMHGLADQALELFMEM 327
+I + C + AL++ + KLG+ +++ G A+ L +M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKML--KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 328 RRIGMKPHAITFIGVLNA-CSHKGLVDEGNKCFDMM--INEYKIVPTVEHYGCLVDILCR 384
IG KP + + ++++ C K + N FD I I P V Y LV+ LC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRV----NDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 385 AGHLQQAKNIIESM---PMRPNKVIWMSLLSSSRNHGN-LEIGE-YAAHNLIEADPDATG 439
+ A ++ M + PN + + +LL + +G LE E + + DPD
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 440 CYTLLSNIYAAAGKWDKVSHVREMMKERGVLKDAGCSIVEHRGKLNRFIVGDKSHPQTKA 499
Y+ L N + D+ + + ++M +G L D +V + +N F + K
Sbjct: 298 -YSSLINGLCLHDRIDEANQMFDLMVSKGCLAD----VVSYNTLINGFCKAKRVEDGMKL 352
Query: 500 IYAKLREMSKK 510
REMS++
Sbjct: 353 ----FREMSQR 359
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 214/472 (45%), Gaps = 63/472 (13%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+ PT+V++N ++ Y R A+ L M + D T +I R + + +G
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG- 322
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNG 121
Y+L R + +M+ + V++N+LI+G++ G
Sbjct: 323 ----YLL--------------------------LRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 122 NVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
V +A +L +EM S + T+ AL+DG G + A ++F M K S VS+
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 174 AMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+++G K+ + +LAR + +M + I++ MI G NG EA+ L + K+
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESA 289
G+ P VT + ++ + + I + + +G++ ++LI + G ++ A
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 290 LAVFKA--IANKKLGHWT--AIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+ +++A + H+T ++ L G +A E M G+ P+ ++F ++N
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Query: 346 CSHKGLVDEGNKCFDMMINEYKIV--PTVEHYGCLVDILCRAGHLQQAKNIIESM---PM 400
+ G EG K F + K+ PT YG L+ LC+ GHL++A+ ++S+ P
Sbjct: 593 YGNSG---EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649
Query: 401 RPNKVIWMSLLSSSRNHGNLE-----IGEYAAHNLIEADPDATGCYTLLSNI 447
+ V++ +LL++ GNL GE +++ PD+ +L+S +
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL---PDSYTYTSLISGL 698
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 203/440 (46%), Gaps = 38/440 (8%)
Query: 9 WNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGY-- 66
++++I Y+ D+L +FR M + P +T ++ V+ G+ + +
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS-----VVKSGEDVSVWSF 220
Query: 67 ---VLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+LK D + L+N+ G + + KM +V++N+++ Y +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAA----REVFDQMPKKSSVS 171
G + A++L D M S+ D T+ L+ L + ++ R++ +M + V+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLL 227
+N +ING+ GK+ +A QL +M L +++N++I G+ G F EA+++F ++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+GL PS V+ L + A R + M ++ + + T +I+ K G ++
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 288 SALAVFKAIA----NKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A+ + ++ + + ++A+I G G A E+ + R+G+ P+ I + ++
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEH--YGCLVDILCRAGHLQQAKNIIESMP-- 399
C G + E + ++ MI E T +H + LV LC+AG + +A+ + M
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGH---TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 400 -MRPNKVIWMSLLSSSRNHG 418
+ PN V + L++ N G
Sbjct: 578 GILPNTVSFDCLINGYGNSG 597
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 29/322 (9%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V+++ +I+ + R A + ++ L P+G +I C R+ ++E +I
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+ ++ G D F + LV K G++ A + M + VS++ LI+GY
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 120 NGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQM----PKKSSVS 171
+G A +FDEM FT+ +LL GL K G + A + + +V
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELF--EV 225
+N ++ KSG + A LFG+M R+++ ++ S+ISG G+ + A+ LF E
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEA 714
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFD-----LDGVLGTSLIEMY 280
+ ++P+ V + + G+W + D D V ++I+ Y
Sbjct: 715 EARGNVLPNKVMYTCFVD-----GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Query: 281 SKCGSIESALAVFKAIANKKLG 302
S+ G IE + + N+ G
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGG 791
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 193/480 (40%), Gaps = 73/480 (15%)
Query: 7 VSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSR----LHAVQEGKQ 62
V +N +++ + A+ LF +M+ +LPD +T +I G R + A+ K+
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 63 IH--GYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-----DVVSWNSLID 115
G VL +K + + V+ K G+ A F + +D D+V+ N++ID
Sbjct: 714 AEARGNVLP-----NKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 116 GYARNGNVEVAMKLFDEMPSRDA----FTWTALLDGLAKCGKVEAAREVFDQ------MP 165
GY+R G +E L EM +++ T+ LL G +K V + ++ +P
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Query: 166 KKSSV---------------------------------SWNAMINGYMKSGKINLARQLF 192
K + ++N +I+ +G+IN A L
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Query: 193 GQMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGL 248
M + + ++M+S N RF E+ + + K+G+ P + ++ + +
Sbjct: 888 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 947
Query: 249 AVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAII 308
+ + M+ H V ++++ +KCG + A + + + KL A
Sbjct: 948 GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 1007
Query: 309 VGLGMH-----GLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMI 363
L MH G +ALEL + M G+K +++ ++ KG + + ++ M
Sbjct: 1008 TTL-MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
Query: 364 NEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNLEIG 423
+ + + + +L R A I++ + R + MSL S +H NL++
Sbjct: 1067 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR-GFITSMSL--SQDSHRNLKMA 1123
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 123/266 (46%), Gaps = 19/266 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P L ++N+++ Y + + LL+R ++ + +LPD T ++ G + ++ G +I
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYAR 119
+ G D++ + L++ GE+ A + M + D + ++++ R
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 120 NGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPK----KSSVS 171
N + + + EM S ++ + L++GL + G ++ A V ++M +V+
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVLL 227
+AM+ K GK + A L M L+ S+ +++ NG +EA+EL V+
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 228 KEGL---MPSHVTILSALSAVSGLAV 250
GL + S+ +++ L A +A+
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMAL 1057
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/536 (21%), Positives = 250/536 (46%), Gaps = 68/536 (12%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIH----- 64
N+++ N A+ L R+M + L+PD F+ VI+G +++ ++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 65 ---------------------------GYVLK---IGFGFDKFVQSSLVNMYAKWGEMGL 94
G++ + +G D V +SL+ + GE+
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 95 ARKVFDKMVDRD----VVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLD 146
+ +FD++++R +++N+LI G+ + G ++ A ++F+ M R + +T+T L+D
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 147 GLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNL-- 200
GL GK + A ++ + M +K ++V++N +IN K G + A ++ M R
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 201 --ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV---LGNGR 255
I++N ++ G G EA +L ++LK+ + ++S + + GL L
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDS-SYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 256 WIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL----GHWTAIIVGL 311
I+ +V+ D V L+ K G + A+ ++K I++ K+ +TA+I G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 312 GMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPT 371
G+ + A L +MR ++P + +L++ +G +D+ + F+ M + P
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PD 563
Query: 372 VEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGEYAAH 428
V + ++D +AG ++ A++++ M + P+ + L++ G L+
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 429 NLIEA--DPDATGCYTLLSNIYAAAGKWDKVSHVREMMKERGVL--KDAGCSIVEH 480
++++ +PDA C ++L + G+ DK++ + + + ++ ++ K+ C+++++
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCI-SQGETDKLTELVKKLVDKDIVLDKELTCTVMDY 678
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 18/318 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+P V++N+II+ + DA+ + M PD T ++ G + E
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 62 QIHGYVLKIGFGFDKFVQS--SLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLID 115
++ +LK D V S +L++ K + A ++D +V++ D V+ N L++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 116 GYARNGNVEVAMKLFDEMPS----RDAFTWTALLDGLAKCGKVEAAREVFDQMP----KK 167
+ G+V AM+L+ ++ R++ T+TA++DG K G + A+ + +M +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRN----LISWNSMISGYQLNGRFLEAMELF 223
S +N +++ K G ++ A +LF +M N ++S+N MI G G A L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 224 EVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKC 283
+ + GL P T ++ L L MV F+ D + S+++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 284 GSIESALAVFKAIANKKL 301
G + + K + +K +
Sbjct: 648 GETDKLTELVKKLVDKDI 665
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 27/368 (7%)
Query: 95 ARKVFDKMVDRD---VVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKC 151
A VF + VD + N+L+ R+ N E+A + +M D F L GL +C
Sbjct: 57 AVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116
Query: 152 ----GKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRNLI-- 201
K A V M K+ + + N ++ G ++ + A L +M +L+
Sbjct: 117 YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPD 176
Query: 202 --SWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHS 259
S+N++I G+ +A+EL + G S VT + A +
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHG 315
M + D V+ TSLI + CG ++ A+F + + + +I G G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHY 375
+A E+F M G++P+ T+ G+++ G E + ++MI E P Y
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI-EKDEEPNAVTY 355
Query: 376 GCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE 432
+++ LC+ G + A I+E M RP+ + + LL G+L+ + +++
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 433 ----ADPD 436
DPD
Sbjct: 416 DSSYTDPD 423
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 19/266 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGK 61
+P +V++N +I + ++ N A +F+ + + PD T +I G + ++E
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGY 117
+ +L++G + LV+ YAK GEM A ++ KM+ DVV++ SLIDGY
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-- 171
R G V +L++EM +R +AFT++ L++ L ++ ARE+ Q+ K +
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 172 --WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
+N +I+G+ K+GK+N A + +M + + I++ +I G+ + GR EA+ +F
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 226 LLKEGLMPSHVTILSALSAV--SGLA 249
++ G P +T+ S LS + +G+A
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMA 503
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 181/406 (44%), Gaps = 55/406 (13%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRD--VVSWNSLIDGYARNGNVEVAMKLFDE----MPS 135
LV+ +A+ G++ A + + + + + NSL++ + VE AMKLFDE
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 136 RDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMKSGKINLARQL 191
D T+ L+ GL GK E A E+ M + V++N +I G+ KS ++N A ++
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 192 F-----GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
F G + +++++ SMISGY G+ EA L + +L+ G+ P++VT + +
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 247 GLAVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWT 305
+ I M+ CF D V TSLI+ Y + G +
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQV------------------- 363
Query: 306 AIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE 365
Q L+ EM GM P+A T+ ++NA ++ + + + + ++
Sbjct: 364 ------------SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 366 YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEI 422
I+P Y ++D C+AG + +A I+E M +P+K+ + L+ G +
Sbjct: 412 -DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 423 GEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
H ++ PD +LLS + AG + H+ ++ ++
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLL-KAGMAKEAYHLNQIARK 515
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N +++ V R DA+ LF + L D T +I+G + ++ ++ G +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFD-----KMVDRDVVSWNSLIDGYARNGNVE 124
G D ++L+ + K E+ A ++F + DVV++ S+I GY + G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 125 VAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMI 176
A L D+M + T+ L+DG AK G++ A E+ +M V++ ++I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 177 NGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+GY + G+++ +L+ +M R N +++ +I+ R L+A EL L + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P FM +I+ + K G + A +
Sbjct: 415 P------------------------QPFMY-----------NPVIDGFCKAGKVNEANVI 439
Query: 293 FKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
+ + KK +T +I+G M G +A+ +F +M IG P IT +L+
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 349 KGLVDEG 355
G+ E
Sbjct: 500 AGMAKEA 506
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 16/266 (6%)
Query: 219 AMELFEVLLKEGLMPSH--VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSL 276
A ++FE + +G+ P++ + L + A G + SF V+ C ++ SL
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC----CMVVNSL 177
Query: 277 IEMYSKCGSIESALAVF----KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
+ K +E A+ +F + + + +I GL G A++ALEL M G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAK 392
+P +T+ ++ +++ ++ F + + P V Y ++ C+AG +++A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 393 NIIESM---PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE--ADPDATGCYTLLSNI 447
++++ M + P V + L+ G + E +I PD +T L +
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT-FTSLIDG 356
Query: 448 YAAAGKWDKVSHVREMMKERGVLKDA 473
Y G+ + + E M RG+ +A
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNA 382
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 19/266 (7%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLL-PDGFTLPCVIKGCSRLHAVQEGK 61
+P +V++N +I + ++ N A +F+ + + PD T +I G + ++E
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVD----RDVVSWNSLIDGY 117
+ +L++G + LV+ YAK GEM A ++ KM+ DVV++ SLIDGY
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVS-- 171
R G V +L++EM +R +AFT++ L++ L ++ ARE+ Q+ K +
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 172 --WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
+N +I+G+ K+GK+N A + +M + + I++ +I G+ + GR EA+ +F
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 226 LLKEGLMPSHVTILSALSAV--SGLA 249
++ G P +T+ S LS + +G+A
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMA 503
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 181/406 (44%), Gaps = 55/406 (13%)
Query: 82 LVNMYAKWGEMGLARKVFDKMVDRD--VVSWNSLIDGYARNGNVEVAMKLFDE----MPS 135
LV+ +A+ G++ A + + + + + NSL++ + VE AMKLFDE
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 136 RDAFTWTALLDGLAKCGKVEAAREVFDQMP----KKSSVSWNAMINGYMKSGKINLARQL 191
D T+ L+ GL GK E A E+ M + V++N +I G+ KS ++N A ++
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 192 F-----GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
F G + +++++ SMISGY G+ EA L + +L+ G+ P++VT + +
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 247 GLAVLGNGRWIHSFMVKH-CFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWT 305
+ I M+ CF D V TSLI+ Y + G +
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQV------------------- 363
Query: 306 AIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE 365
Q L+ EM GM P+A T+ ++NA ++ + + + + ++
Sbjct: 364 ------------SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 366 YKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLEI 422
I+P Y ++D C+AG + +A I+E M +P+K+ + L+ G +
Sbjct: 412 -DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 423 GEYAAHNLIE--ADPDATGCYTLLSNIYAAAGKWDKVSHVREMMKE 466
H ++ PD +LLS + AG + H+ ++ ++
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLL-KAGMAKEAYHLNQIARK 515
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 10 NLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLK 69
N +++ V R DA+ LF + L D T +I+G + ++ ++ G +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 70 IGFGFDKFVQSSLVNMYAKWGEMGLARKVFD-----KMVDRDVVSWNSLIDGYARNGNVE 124
G D ++L+ + K E+ A ++F + DVV++ S+I GY + G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 125 VAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMI 176
A L D+M + T+ L+DG AK G++ A E+ +M V++ ++I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 177 NGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLM 232
+GY + G+++ +L+ +M R N +++ +I+ R L+A EL L + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 233 PSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAV 292
P FM +I+ + K G + A +
Sbjct: 415 P------------------------QPFMY-----------NPVIDGFCKAGKVNEANVI 439
Query: 293 FKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSH 348
+ + KK +T +I+G M G +A+ +F +M IG P IT +L+
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 349 KGLVDEG 355
G+ E
Sbjct: 500 AGMAKEA 506
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 16/266 (6%)
Query: 219 AMELFEVLLKEGLMPSH--VTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSL 276
A ++FE + +G+ P++ + L + A G + SF V+ C ++ SL
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC----CMVVNSL 177
Query: 277 IEMYSKCGSIESALAVF----KAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGM 332
+ K +E A+ +F + + + +I GL G A++ALEL M G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 333 KPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAK 392
+P +T+ ++ +++ ++ F + + P V Y ++ C+AG +++A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 393 NIIESM---PMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIE--ADPDATGCYTLLSNI 447
++++ M + P V + L+ G + E +I PD +T L +
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT-FTSLIDG 356
Query: 448 YAAAGKWDKVSHVREMMKERGVLKDA 473
Y G+ + + E M RG+ +A
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNA 382
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 170/357 (47%), Gaps = 31/357 (8%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P +V+ + +I+ + +R DA+ L +M PD +I G ++ V +
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGY 117
++ + + G D +SLV G A ++ MV RD V+++ ++ID +
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS---- 169
+ G AMKL++EM R D FT+ +L++GL G+V+ A+++ D M K
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEV 225
V++N +ING+ KS +++ +LF +M R L I++N++I GY GR A E+F
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 226 LLKEGLMPSHVTILSALS----AVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYS 281
+ + ++ +L L L + N M K +LD +I
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFEN-------MQKSEIELDITTYNIVIHGMC 427
Query: 282 KCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKP 334
K G++E A +F++++ K L +T +I G D++ L+ +M+ G+ P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 179/422 (42%), Gaps = 65/422 (15%)
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFD 162
+V ++ ++ A++ N ++ + LF M D +++ +++ L +C + A V
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 163 QMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNG 214
+M K V+ +++ING+ + ++ A L +M +++ +N++I G G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW-----IHSFMVKHCFDLD 269
+A+ELF+ + ++G+ VT S V+GL +GRW + MV +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVT---YNSLVAGLCC--SGRWSDAARLMRDMVMRDIVPN 243
Query: 270 GVLGTSLIEMYSKCGSIESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFM 325
+ T++I+++ K G A+ +++ + + + + ++I GL MHG D+A ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 326 EMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
M G P +T+ ++N VDEG K F M + T+ Y ++ +A
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQA 362
Query: 386 GHLQQAKNIIESMPMRPN----KVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD------- 434
G A+ I M RPN ++ L + R L + E + IE D
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 435 --------------------------PDATGCYTLLSNIYAAAGKWDKVSHVREMMKERG 468
PD T++S + +WDK + M+E G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG-FCRKRQWDKSDLLYRKMQEDG 481
Query: 469 VL 470
+L
Sbjct: 482 LL 483
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 193/415 (46%), Gaps = 21/415 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
PT++ ++ + S + + L L +QM + + +TL +I R +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G ++K+G+ + S+L+N G + A ++ D+MV+ D+++ N+L++G
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVS 171
+G AM L D+M +A T+ +L+ + K G+ A E+ +M +++ +V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
++ +I+G K G ++ A LF +M + N+I++N +I G+ GR+ + +L ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K + P+ VT + + L +H M+ D + TSLI+ + K ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A + + +K + + +I G D LELF +M G+ +T+ ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
G ++ + F M++ K+ P + Y L+D LC G ++A I E +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 169/381 (44%), Gaps = 20/381 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
HKP L++ N +++ + + +A+LL +M+ + P+ T V+ +
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
++ + + D S +++ K G + A +F++M + +++++N LI G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
G + KL +M R + T++ L+D K GK+ A E+ +M + +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
+++ ++I+G+ K ++ A Q+ M + N+ ++N +I+GY R + +ELF
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ G++ VT + + L L + + MV + V L++ G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 286 IESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
E AL +F+ I K+ G + II G+ D A +LF + G+KP T+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 342 VLNACSHKGLVDEGNKCFDMM 362
++ KG + E F M
Sbjct: 549 MIGGLCKKGPLSEAELLFRKM 569
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 74/332 (22%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
++++N++I + + R +D L R M+ + P+ T +I + ++E +++H
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR-------------------- 105
++ G D +SL++ + K + A ++ D MV +
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 106 -------------------DVVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWT 142
D V++N+LI G+ G + VA +LF EM SR + T+
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 143 ALLDGLAKCGKVEAAREVFDQMPKKSSVS-----WNAMINGYMKSGKINLARQLFGQMPG 197
LLDGL G+ E A E+F+++ +KS + +N +I+G + K++ A LF +P
Sbjct: 478 ILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 198 R----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGN 253
+ + ++N MI G G EA LF + ++G P
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG------------------ 578
Query: 254 GRWIHSFMVK-HCFDLDGVLGTSLIEMYSKCG 284
W ++ +++ H D D LIE +CG
Sbjct: 579 --WTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 38/317 (11%)
Query: 177 NGYMKSGKINLARQL-------FGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
G ++ IN +L F RNL S+ + ++ + +A++LF ++
Sbjct: 24 TGTLRIALINCPNELSFCCERGFSAFSDRNL-SYRERLRSGLVDIKADDAIDLFRDMIHS 82
Query: 230 GLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHC--FDLDGVLG-----TSLIEMYSK 282
+P+ + SA++ + ++ C +L G+ + +I + +
Sbjct: 83 RPLPTVIDFSRLFSAIAKTKQ-------YDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 283 CGSIESALAVFKAIANKKLGH------WTAIIVGLGMHGLADQALELFMEMRRIGMKPHA 336
C + A + I KLG+ ++ +I GL + G +ALEL M +G KP
Sbjct: 136 CRKLCLAFSAMGKII--KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 337 ITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIE 396
IT ++N G E D M+ EY P YG +++++C++G A ++
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 397 SMPMRPNK---VIWMSLLSSSRNHGNLEIGEYAAHNLIEADPDATG--CYTLLSNIYAAA 451
M R K V + ++ HG+L+ + N +E T Y +L + A
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLD-NAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 452 GKWDKVSH-VREMMKER 467
G+WD + +R+M+K +
Sbjct: 312 GRWDDGAKLLRDMIKRK 328
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 212/470 (45%), Gaps = 56/470 (11%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQM-LHHDLL--PDGFTLPCVIKGCSRLHAVQE 59
+P ++S+N +I + N A L+ + H + PD + + G S++ + E
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 60 GKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLID 115
G +LK + S+ ++ + K GE+ LA K F M + +VV++ LID
Sbjct: 148 VFVYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 116 GYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK---- 167
GY + G++EVA+ L+ EM S + T+TAL+DG K G+++ A E++ +M +
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELF 223
+S+ + +I+G+ + G + A + +M + ++ ++ +ISG NG+ EA E+
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 224 EVLLKEGLMPSHVTILSALSA-------------------------VSGLAVLGNG---- 254
E + K L+P V + ++A V L+ + +G
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 255 RWIHSFMVKHCFD-LDGVLGTSLIEMYSKCGSIESALAVFKAIANKKL----GHWTAIIV 309
+H +V C + + V+ T LI+ K G +F I+ L +T+ I
Sbjct: 387 GQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 310 GLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIV 369
GL G A +L M + G+ + + ++ + KGL+ E + FD M+N I
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS-GIS 505
Query: 370 PTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGN 419
P + L+ + G++ A +++ M R V +S S+ GN
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDM-QRRGLVTAVSDADCSKQCGN 554
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 186/419 (44%), Gaps = 25/419 (5%)
Query: 24 DALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLV 83
+AL ++ LPD FT I + + Y++ G+ + +S+V
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 84 NMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSRDAF 139
+ K G++ A + M + DV+S+NSLIDG+ RNG++ A + + + + F
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 140 -------TWTALLDGLAKCGKVEAAREVFDQMPKKSS---VSWNAMINGYMKSGKINLAR 189
++ +L +G +K ++ M K S V+++ I+ + KSG++ LA
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 190 QLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAV 245
+ F M N++++ +I GY G A+ L++ + + + + VT + +
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 246 SGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANK----KL 301
+ ++S MV+ + + ++ T++I+ + + G ++A+ + N+ +
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 302 GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDM 361
+ II GL +G +A E+ +M + + P + F ++NA G + +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 362 MINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKVIWMSLLSSSRNHGNL 420
+I E P V ++D + + G L +A I+ + N V++ L+ + G+
Sbjct: 364 LI-ERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKANDVMYTVLIDALCKEGDF 419
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 199/431 (46%), Gaps = 24/431 (5%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
PT++ +N + S + L L +QM + +TL +I R +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G ++K+G+ D + ++L+N + A ++ D+MV+ +++ N+L++G
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKS----SVS 171
NG V A+ L D M + T+ +L+ + K G+ A E+ +M +++ +V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
++ +I+G K G ++ A LF +M + ++I++N++I G+ GR+ + +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
K + P+ VT + + L + M++ + + SLI+ + K +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 288 SALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
A+ + + +K + + +I G D LELF EM G+ + +T+ ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNI---IESMPM 400
G ++ K F M++ ++ P + Y L+D LC G L++A I IE M
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 401 RPNKVIWMSLL 411
+ I+M ++
Sbjct: 505 ELDIGIYMIII 515
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 202/418 (48%), Gaps = 23/418 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
++P V +N +++ R ++AL L +M+ P TL ++ G V +
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGY 117
+ +++ GF ++ ++N+ K G+ LA ++ KM +R D V ++ +IDG
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKKSS--- 169
++G+++ A LF+EM + D T+ L+ G G+ + A+ + D + +K S
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
V+++ +I+ ++K GK+ A QL +M R N I++NS+I G+ R EA+++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ +G P +T ++ + +G + M + V +L++ + + G
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 286 IESALAVFKAIANKK----LGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+E A +F+ + +++ + + ++ GL +G ++ALE+F ++ + M+ ++
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 342 VLNACSHKGLVDEGNKCF-DMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
+++ + VD+ F + + K+ Y ++ LCR L +A + M
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKL--DARAYNIMISELCRKDSLSKADILFRKM 569
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 175/384 (45%), Gaps = 20/384 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
HKPTL++ N +++ N + +DA++L +M+ P+ T V+ +
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKM----VDRDVVSWNSLIDGY 117
++ + + D S +++ K G + A +F++M D++++N+LI G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SS 169
G + KL +M R + T++ L+D K GK+ A ++ +M ++ ++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEV 225
+++N++I+G+ K ++ A Q+ M + +++++N +I+GY R + +ELF
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
+ G++ + VT + + L + + MV D V L++ G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 286 IESALAVFKAIANKKL----GHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIG 341
+E AL +F I K+ G + II G+ D A +LF + G+K A +
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 342 VLNACSHKGLVDEGNKCFDMMINE 365
+++ K + + + F M E
Sbjct: 549 MISELCRKDSLSKADILFRKMTEE 572
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 18/251 (7%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V+++++I +V + +A L ++M+ + P+ T +I G + + ++E Q+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDV----VSWNSLIDGYAR 119
++ G D + L+N Y K + ++F +M R V V++N+L+ G+ +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWN-- 173
+G +EVA KLF EM SR D ++ LLDGL G++E A E+F ++ +KS + +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI-EKSKMELDIG 509
Query: 174 ---AMINGYMKSGKINLARQLFGQMPGRNLI----SWNSMISGYQLNGRFLEAMELFEVL 226
+I+G + K++ A LF +P + + ++N MIS +A LF +
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 227 LKEGLMPSHVT 237
+EG P +T
Sbjct: 570 TEEGHAPDELT 580
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 20/354 (5%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
H+P++V++ +++ + R DAL +F QM+ P+ +I G + V
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGY 117
+ + K G G D +SL++ G A ++ M R DV ++N+LID
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS---- 169
+ G V A + ++EM R D T++ L+ GL +++ A E+F M K
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMPG----RNLISWNSMISGYQLNGRFLEAMELFEV 225
V+++ +INGY KS K+ +LF +M RN +++ +I GY G+ A E+F
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ G+ P+ +T L + + I + M K+ D D V +I K G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 286 IESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPH 335
+ A ++ ++ + L +T +++GL GL +A LF +M+ G+ P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 183/398 (45%), Gaps = 25/398 (6%)
Query: 23 NDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSL 82
+D+L LF M+ LP ++ S++ + + +G + + L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 83 VNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLIDGYARNGNVEVAMKLFDEMPSR-- 136
+N + + ++ LA KM+ + +V++ SL++G+ R V A+ +FD+M
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 137 --DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSGKINLARQ 190
+ + ++DGL K +V+ A ++ ++M K V++N++I+G SG+ + A +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 191 LFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVS 246
+ M R ++ ++N++I GR EA E +E +++ L P VT + +
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 247 GLAVLGNGRWIHSFMV-KHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLGH-- 303
+ L + FMV K CF D V + LI Y K +E + +F ++ + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 304 --WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCF-D 360
+T +I G G + A E+F M G+ P+ IT+ +L+ G +++ D
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 361 MMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
M N + + Y ++ +C+AG + A +I S+
Sbjct: 422 MQKN--GMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 30/339 (8%)
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMP----SRDAFTWTALLDGLAKCGKVEAAREVFD 162
+ ++ L+ ++ +V + L+++M + T LL+ +C ++ A
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140
Query: 163 QMPK----KSSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNG 214
+M K S V++ +++NG+ + ++ A +F QM G N++ +N++I G +
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRW-----IHSFMVKHCFDLD 269
+ A++L + K+G+ P VT S +S + +GRW + S M K D
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS-----SGRWSDATRMVSCMTKREIYPD 255
Query: 270 GVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFM 325
+LI+ K G + A ++ + + L ++ +I GL M+ D+A E+F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 326 EMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
M G P +T+ ++N V+ G K F M ++ +V Y L+ CRA
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRA 374
Query: 386 GHLQQAKNIIESMP---MRPNKVIWMSLLSSSRNHGNLE 421
G L A+ I M + PN + + LL ++G +E
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 210/490 (42%), Gaps = 22/490 (4%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P++ + N+++ + N A ++ M+ H ++P T ++ C + ++ +I
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRDVV----SWNSLIDGYAR 119
+ + F + + L+N ++K G+M AR+ M S+N LI+GY +
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 120 NGNVEVAMKLFDEMPSRDAF----TWTALLDGLAKCGKVEAAREVFDQMPKKSSVSWNAM 175
G + A + DEM + + T+ + L G+++ ARE+ M VS+N +
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTL 380
Query: 176 INGYMKSGKINLARQLFGQMPG----RNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
++GY+K GK A LF + +++++N++I G +G A L E + + +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
P +T + + L ++ M++ DG T+ + G + A
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 292 VFKAIANK-----KLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNAC 346
+ + + L + I GL G +A+E ++ R+G+ P +T+ V+
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 347 SHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---MRPN 403
G +D M+ + ++ P+V Y L+ +AG L+QA M +RPN
Sbjct: 561 LENGQFKMARNLYDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 404 KVIWMSLLSSSRNHGNL-EIGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVRE 462
+ +LL GN+ E Y E P YT+L + KW++V + +
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 463 MMKERGVLKD 472
M ++ + D
Sbjct: 680 EMLDKEIEPD 689
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 17/254 (6%)
Query: 1 MHKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEG 60
M P +VS+N ++ Y+ + +A LLF + D+ P T +I G ++
Sbjct: 369 MAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 61 KQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDG 116
+++ + D ++LV + K G + +A +V+D+M+ + D ++ + G
Sbjct: 429 QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488
Query: 117 YARNGNVEVAMKLFDEMPSRDAFT-----WTALLDGLAKCGK----VEAAREVFDQMPKK 167
R G+ + A +L +EM + D + +DGL K G +E R++F
Sbjct: 489 ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 168 SSVSWNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELF 223
V++ +I GY+++G+ +AR L+ +M + L I++ +I G+ GR +A +
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 224 EVLLKEGLMPSHVT 237
+ K G+ P+ +T
Sbjct: 609 TEMKKRGVRPNVMT 622
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 501 YAKLREMSKKLKLAGHVPDTSQVLXXXXXXXXXXXXXXXXXXRLAISFGLLNMERRTPIR 560
Y KL+ + K+++ AG+VP+T VL RLAI+FG++N T IR
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSE-RLAIAFGIINTPPGTTIR 191
Query: 561 IMKNLRVCNDCHAVTKLLSAIYGREIIVRDNSRFHHFKNGTCSCNDFW 608
+MKNLR+C DCH K+LS+I REIIVRDN RFHHF++G CSC D+W
Sbjct: 192 VMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 204/426 (47%), Gaps = 43/426 (10%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLH-----HDLLPDGFTLPCVIKGCSRLHAVQ 58
P++V + +++ N R + ++ F Q + HDL + C + CSRL
Sbjct: 69 PSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR-CSRLSF-- 124
Query: 59 EGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMV----DRDVVSWNSLI 114
+ G ++K+G+ SL++ + +G A + MV + +VV +N+LI
Sbjct: 125 -ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 115 DGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGK-VEAAREVFDQMPKK-- 167
DG +NG + +A++L +EM + D T+ LL GL G+ +AAR + D M +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 168 -SSVSWNAMINGYMKSGKINLARQLFGQM----PGRNLISWNSMISGYQLNGRFLEAMEL 222
V++ A+I+ ++K G ++ A++L+ +M N +++NS+I+G ++GR +A +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 223 FEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSK 282
F+++ +G P+ VT + +S ++ G + M F+ D +LI Y +
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 283 CGSIESALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRR----IGMKP 334
G + AL +F + ++++ ++ GL ++G + AL F +MR IG+
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 335 HAITFIGVLNACSHKGLVDEGNKCFDMM--INEYKIVPTVEHYGCLVDILCRAGHLQQAK 392
+ I G+ A D+ K +++ + + P Y ++ LC+ G ++A
Sbjct: 424 YNIMIHGLCKA-------DKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 393 NIIESM 398
+I M
Sbjct: 477 ELIRRM 482
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 63/448 (14%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ S+N++I R +A L M PD + V+ G R + + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNG 121
+ + G + ++ S++ + + ++ A + F +M+ + D V + +LIDG+ + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
++ A K F EM SR D T+TA++ G + G + A ++F +M K SV++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 174 AMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+INGY K+G + A ++ M N++++ ++I G G A EL + K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 230 GLMPSHVTILSALSAVSGLAVLGN----GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
GL P+ I + S V+GL GN + + F + D V T+L++ Y K G
Sbjct: 486 GLQPN---IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG-LNADTVTYTTLMDAYCKSGE 541
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+ D+A E+ EM G++P +TF ++N
Sbjct: 542 M-------------------------------DKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
G++++G K + M+ + I P + LV C +L+ A I + M R
Sbjct: 571 FCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---- 625
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
+ + + NL G A N+ EA
Sbjct: 626 ---GVGPDGKTYENLVKGHCKARNMKEA 650
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 50/424 (11%)
Query: 75 DKFVQ--SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDE 132
D FVQ LV Y WG +VFD V + L+D G + A ++F++
Sbjct: 155 DSFVQFFDLLVYTYKDWGS---DPRVFD-------VFFQVLVDF----GLLREARRVFEK 200
Query: 133 MPSR----DAFTWTALLDGLAK-CGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSG 183
M + + L L+K C K A VF + P+ + S+N +I+ + G
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 184 KINLARQLF------GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
+I A L G P ++IS++++++GY G + +L EV+ ++GL P+
Sbjct: 261 RIKEAHHLLLLMELKGYTP--DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
S + + + L S M++ D V+ T+LI+ + K G I +A F +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 298 NKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
++ + +TAII G G +A +LF EM G++P ++TF ++N G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSL 410
+ + + MI + P V Y L+D LC+ G L A ++ M ++PN + S+
Sbjct: 439 DAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 411 LSSSRNHGNLE-----IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
++ GN+E +GE+ A L AD T YT L + Y +G+ DK + + M
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGL-NAD---TVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 466 ERGV 469
+G+
Sbjct: 554 GKGL 557
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 188/419 (44%), Gaps = 55/419 (13%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+ P ++S++ +++ Y + L M L P+ + +I R+ + E +
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGY 117
+ +++ G D V ++L++ + K G++ A K F +M RD V+++ ++I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 118 ARNGNVEVAMKLFDEM------PS-----------------RDAF--------------- 139
+ G++ A KLF EM P +DAF
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 140 -TWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQ 194
T+T L+DGL K G +++A E+ +M K + ++N+++NG KSG I A +L G+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 195 MPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
L +++ +++ Y +G +A E+ + +L +GL P+ VT ++ +
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTA 306
L +G + ++M+ + SL++ Y ++++A A++K + ++ +G +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE 365
++ G +A LF EM+ G T+ ++ + E + FD M E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 121/244 (49%), Gaps = 16/244 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V++ +I + A L +M L P+ FT ++ G + ++E ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G G D ++L++ Y K GEM A+++ +M+ + +V++N L++G+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
+G +E KL + M ++ +A T+ +L+ ++AA ++ M + +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ ++ G+ K+ + A LF +M G+ ++ +++ +I G+ +FLEA E+F+ +
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 228 KEGL 231
+EGL
Sbjct: 694 REGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 63/448 (14%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ S+N++I R +A L M PD + V+ G R + + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 66 YVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYARNG 121
+ + G + ++ S++ + + ++ A + F +M+ + D V + +LIDG+ + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 122 NVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWN 173
++ A K F EM SR D T+TA++ G + G + A ++F +M K SV++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 174 AMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEVLLKE 229
+INGY K+G + A ++ M N++++ ++I G G A EL + K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 230 GLMPSHVTILSALSAVSGLAVLGN----GRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
GL P+ I + S V+GL GN + + F + D V T+L++ Y K G
Sbjct: 486 GLQPN---IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG-LNADTVTYTTLMDAYCKSGE 541
Query: 286 IESALAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNA 345
+ D+A E+ EM G++P +TF ++N
Sbjct: 542 M-------------------------------DKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 346 CSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMPMRPNKV 405
G++++G K + M+ + I P + LV C +L+ A I + M R
Sbjct: 571 FCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---- 625
Query: 406 IWMSLLSSSRNHGNLEIGEYAAHNLIEA 433
+ + + NL G A N+ EA
Sbjct: 626 ---GVGPDGKTYENLVKGHCKARNMKEA 650
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 50/424 (11%)
Query: 75 DKFVQ--SSLVNMYAKWGEMGLARKVFDKMVDRDVVSWNSLIDGYARNGNVEVAMKLFDE 132
D FVQ LV Y WG +VFD V + L+D G + A ++F++
Sbjct: 155 DSFVQFFDLLVYTYKDWGS---DPRVFD-------VFFQVLVDF----GLLREARRVFEK 200
Query: 133 MPSR----DAFTWTALLDGLAK-CGKVEAAREVFDQMPKK----SSVSWNAMINGYMKSG 183
M + + L L+K C K A VF + P+ + S+N +I+ + G
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 184 KINLARQLF------GQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVT 237
+I A L G P ++IS++++++GY G + +L EV+ ++GL P+
Sbjct: 261 RIKEAHHLLLLMELKGYTP--DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 238 ILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA 297
S + + + L S M++ D V+ T+LI+ + K G I +A F +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 298 NKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVD 353
++ + +TAII G G +A +LF EM G++P ++TF ++N G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 354 EGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM---PMRPNKVIWMSL 410
+ + + MI + P V Y L+D LC+ G L A ++ M ++PN + S+
Sbjct: 439 DAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 411 LSSSRNHGNLE-----IGEYAAHNLIEADPDATGCYTLLSNIYAAAGKWDKVSHVREMMK 465
++ GN+E +GE+ A L AD T YT L + Y +G+ DK + + M
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGL-NAD---TVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 466 ERGV 469
+G+
Sbjct: 554 GKGL 557
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 188/419 (44%), Gaps = 55/419 (13%)
Query: 2 HKPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGK 61
+ P ++S++ +++ Y + L M L P+ + +I R+ + E +
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 62 QIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDRD----VVSWNSLIDGY 117
+ +++ G D V ++L++ + K G++ A K F +M RD V+++ ++I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 118 ARNGNVEVAMKLFDEM------PS-----------------RDAF--------------- 139
+ G++ A KLF EM P +DAF
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 140 -TWTALLDGLAKCGKVEAAREVFDQMPK----KSSVSWNAMINGYMKSGKINLARQLFGQ 194
T+T L+DGL K G +++A E+ +M K + ++N+++NG KSG I A +L G+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 195 MPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAV 250
L +++ +++ Y +G +A E+ + +L +GL P+ VT ++ +
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 251 LGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIANKKLG----HWTA 306
L +G + ++M+ + SL++ Y ++++A A++K + ++ +G +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 307 IIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINE 365
++ G +A LF EM+ G T+ ++ + E + FD M E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 121/244 (49%), Gaps = 16/244 (6%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P +V++ +I + A L +M L P+ FT ++ G + ++E ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
G G D ++L++ Y K GEM A+++ +M+ + +V++N L++G+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
+G +E KL + M ++ +A T+ +L+ ++AA ++ M + +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLL 227
+ ++ G+ K+ + A LF +M G+ ++ +++ +I G+ +FLEA E+F+ +
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 228 KEGL 231
+EGL
Sbjct: 694 REGL 697
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 231/513 (45%), Gaps = 56/513 (10%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ S+N++I C+ H+ + +L F ++ PD T ++ G + E + G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 66 YVLKIGF-----GFDKFVQ----------SSLVNMYAKWGEMGLARKVFDKMVDR----D 106
Y+++ GF FD+ V+ ++L+N G + A + +KMV + D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFD 162
VV++ ++++G + G+ + A+ L +M D ++A++D L K G A+ +F
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 163 QMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNG 214
+M +K + ++N MI+G+ G+ + A++L M R +++++N++IS G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL----DG 270
+ EA +L + +L + P VT S + + R+ + KH FDL D
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMI-----YGFCKHNRFDDA---KHMFDLMASPDV 432
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD-----QALELFM 325
V ++I++Y + ++ + + + I+ + L T L +HG + A +LF
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL-IHGFCEVDNLNAAQDLFQ 491
Query: 326 EMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
EM G+ P IT +L ++E + F+ +I KI Y ++ +C+
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 386 GHLQQAKNIIESMPM---RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA--DPDATGC 440
+ +A ++ S+P+ P+ + ++S + H + + +PD +
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 441 YTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
TL+ AG+ DK + M+ G DA
Sbjct: 611 NTLIRGCL-KAGEIDKSIELISEMRSNGFSGDA 642
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 186/411 (45%), Gaps = 17/411 (4%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P ++++N +I+ R +A L +M+ L D T ++ G ++ + +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+ + D + S++++ K G A+ +F +M+++ +V ++N +IDG+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
G A +L +M R D T+ AL+ K GK+ A ++ D+M + +V+
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+N+MI G+ K + + A+ +F M +++++N++I Y R E M+L + + GL
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+ + T + + + L + + M+ H D + L+ + + +E AL
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 292 VFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
+F+ I K+ + II G+ D+A +LF + G++P T+ +++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
K + + N F M + P Y L+ +AG + ++ +I M
Sbjct: 584 GKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 164/354 (46%), Gaps = 20/354 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP +V ++ II + +DA LF +ML + P+ FT C+I G + ++
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ +++ D ++L++ K G++ A K+ D+M+ R D V++NS+I G+
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNA 174
++ + A +FD M S D T+ ++D + +V+ ++ ++ ++ ++ ++N
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 175 MINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+I+G+ + +N A+ LF +M + I+ N ++ G+ N + EA+ELFEV+
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ V + + + + + + H + D +I + +I A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 291 AVFKAIANKKLGH------WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
+F + + GH + +I G G D+++EL EMR G A T
Sbjct: 593 VLFHKMKDN--GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 228/513 (44%), Gaps = 56/513 (10%)
Query: 6 LVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQIHG 65
+ S+N++I C+ H+ + +L F ++ PD T ++ G + E + G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 66 YVLKIGF-----GFDKFVQ----------SSLVNMYAKWGEMGLARKVFDKMVDR----D 106
Y+++ GF FD+ V+ ++L+N G + A + +KMV + D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 107 VVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFD 162
VV++ ++++G + G+ + A+ L +M D ++A++D L K G A+ +F
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 163 QMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNG 214
+M +K + ++N MI+G+ G+ + A++L M R +++++N++IS G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDL----DG 270
+ EA +L + +L + P VT S + + KH FDL D
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--------KHMFDLMASPDV 432
Query: 271 VLGTSLIEMYSKCGSIESALAVFKAIANKKLGHWTAIIVGLGMHGLAD-----QALELFM 325
V ++I++Y + ++ + + + I+ + L T L +HG + A +LF
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL-IHGFCEVDNLNAAQDLFQ 491
Query: 326 EMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRA 385
EM G+ P IT +L ++E + F+ +I KI Y ++ +C+
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 386 GHLQQAKNIIESMPM---RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA--DPDATGC 440
+ +A ++ S+P+ P+ + ++S + H + + +PD +
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 441 YTLLSNIYAAAGKWDKVSHVREMMKERGVLKDA 473
TL+ AG+ DK + M+ G DA
Sbjct: 611 NTLIRGC-LKAGEIDKSIELISEMRSNGFSGDA 642
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 186/411 (45%), Gaps = 17/411 (4%)
Query: 4 PTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQI 63
P ++++N +I+ R +A L +M+ L D T ++ G ++ + +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 64 HGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYAR 119
+ + D + S++++ K G A+ +F +M+++ +V ++N +IDG+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 120 NGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVS 171
G A +L +M R D T+ AL+ K GK+ A ++ D+M + +V+
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNLISWNSMISGYQLNGRFLEAMELFEVLLKEGL 231
+N+MI G+ K + + A+ +F M +++++N++I Y R E M+L + + GL
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 232 MPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESALA 291
+ + T + + + L + + M+ H D + L+ + + +E AL
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 292 VFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVLNACS 347
+F+ I K+ + II G+ D+A +LF + G++P T+ +++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 348 HKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESM 398
K + + N F M + P Y L+ +AG + ++ +I M
Sbjct: 584 GKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 164/354 (46%), Gaps = 20/354 (5%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
KP +V ++ II + +DA LF +ML + P+ FT C+I G + ++
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 63 IHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKVFDKMVDR----DVVSWNSLIDGYA 118
+ +++ D ++L++ K G++ A K+ D+M+ R D V++NS+I G+
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 119 RNGNVEVAMKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFDQMPKK----SSVSWNA 174
++ + A +FD M S D T+ ++D + +V+ ++ ++ ++ ++ ++N
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 175 MINGYMKSGKINLARQLFGQMPGR----NLISWNSMISGYQLNGRFLEAMELFEVLLKEG 230
+I+G+ + +N A+ LF +M + I+ N ++ G+ N + EA+ELFEV+
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 231 LMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIESAL 290
+ V + + + + + + H + D +I + +I A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 291 AVFKAIANKKLGH------WTAIIVGLGMHGLADQALELFMEMRRIGMKPHAIT 338
+F + + GH + +I G G D+++EL EMR G A T
Sbjct: 593 VLFHKMKDN--GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 190/401 (47%), Gaps = 34/401 (8%)
Query: 39 PDGFTLPCVIKGCSRLHAVQEGKQIHGYVLKIGFGFDKFVQSSLVNMYAKWGEMGLARKV 98
PD F +I G +++ + + ++ + F D + ++ G++ LA KV
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 99 FDKMVDRD----VVSWNSLIDGYARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAK 150
++++ + V+++ LI+ G V+ A+KL DEM SR D FT+ ++ G+ K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 151 CGKVEAAREVFDQMPKKSS----VSWNAMINGYMKSGK----INLARQLFGQMPGRNLIS 202
G V+ A E+ + K +S+N ++ + GK L ++F + N+++
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 203 WNSMISGYQLNGRFLEAMELFEVLLKEGLMP---SHVTILSALSAVSGLAVLGNGRWIHS 259
++ +I+ +G+ EAM L +++ ++GL P S+ +++A L V ++ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI--EFLET 393
Query: 260 FMVKHCFDLDGVLGTSLIEMYSKCGSIESALAVFKAIA----NKKLGHWTAIIVGLGMHG 315
+ C D V +++ K G + AL +F + + + + L G
Sbjct: 394 MISDGCLP-DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 316 LADQALELFMEMRRIGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMIN--EYKIVPTVE 373
+AL + +EM G+ P IT+ +++ +G+VDE F+++++ + P+V
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEFHPSVV 509
Query: 374 HYGCLVDILCRAGHLQQAKNIIESMP---MRPNKVIWMSLL 411
Y ++ C+A ++ A N++ESM RPN+ + L+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 160/349 (45%), Gaps = 22/349 (6%)
Query: 3 KPTLVSWNLIISCYVHNHRSNDALLLFRQMLHHDLLPDGFTLPCVIKGCSRLHAVQEGKQ 62
+PT++++ ++I + ++AL L +ML L PD FT +I+G + V +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 63 IHGYVLKIGFGFD----KFVQSSLVNMYAKWGE-MGLARKVFDKMVDRDVVSWNSLIDGY 117
+ + G D + +L+N KW E L K+F + D +VV+++ LI
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQ-GKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 118 ARNGNVEVAMKLFDEMPSR----DAFTWTALLDGLAKCGKVEAAREVFDQMPKKSS---- 169
R+G +E AM L M + DA+++ L+ + G+++ A E + M
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 170 VSWNAMINGYMKSGKINLARQLFGQMP----GRNLISWNSMISGYQLNGRFLEAMELFEV 225
V++N ++ K+GK + A ++FG++ N S+N+M S +G + A+ +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 226 LLKEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGS 285
++ G+ P +T S +S + ++ + M F V ++ + K
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 286 IESALAVFKAIANK----KLGHWTAIIVGLGMHGLADQALELFMEMRRI 330
IE A+ V +++ +T +I G+G G +A+EL ++ RI
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 162/364 (44%), Gaps = 29/364 (7%)
Query: 106 DVVSWNSLIDGYARNGNVEVA---MKLFDEMPSRDAFTWTALLDGLAKCGKVEAAREVFD 162
DV+ LI G+ N+ A M++ ++ D F + AL++G K +++ A V D
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLD 182
Query: 163 QMPKK----SSVSWNAMINGYMKSGKINLARQLFGQMPGRN----LISWNSMISGYQLNG 214
+M K +V++N MI GK++LA ++ Q+ N +I++ +I L G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 215 RFLEAMELFEVLLKEGLMPSHVTILSALSAVSGLAVLGNG-RWIHSFMVKHCFDLDGVLG 273
EA++L + +L GL P T + + + ++ + + +K C + D +
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC-EPDVISY 301
Query: 274 TSLIEMYSKCGSIESA----LAVFKAIANKKLGHWTAIIVGLGMHGLADQALELFMEMRR 329
L+ G E +F + + ++ +I L G ++A+ L M+
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 330 IGMKPHAITFIGVLNACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQ 389
G+ P A ++ ++ A +G +D + + MI++ +P + +Y ++ LC+ G
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKAD 420
Query: 390 QAKNI---IESMPMRPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEA-----DPDATGCY 441
QA I + + PN + ++ S+ + G+ A H ++E DPD
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD---KIRALHMILEMMSNGIDPDEITYN 477
Query: 442 TLLS 445
+++S
Sbjct: 478 SMIS 481
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 158/378 (41%), Gaps = 63/378 (16%)
Query: 119 RNGNVEVAMKLFDEMPSR----DAFTWTALLDG---LAKCGKVEAAREVFDQMPKKSSVS 171
R+GN ++ L + M + D T L+ G L K E+ ++ + +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 172 WNAMINGYMKSGKINLARQLFGQMPGRNL----ISWNSMISGYQLNGRFLEAMELFEVLL 227
+NA+ING+ K +I+ A ++ +M ++ +++N MI G+ A+++ LL
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 228 KEGLMPSHVTILSALSAVSGLAVLGNGRWIHSFMVKHCFDLDGVLGTSLIEMYSKCGSIE 287
+ P+ +T T LIE G ++
Sbjct: 221 SDNCQPTVITY-----------------------------------TILIEATMLEGGVD 245
Query: 288 SALAVFKAIANKKLG----HWTAIIVGLGMHGLADQALELFMEMRRIGMKPHAITFIGVL 343
AL + + ++ L + II G+ G+ D+A E+ + G +P I++ +L
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 344 NACSHKGLVDEGNKCFDMMINEYKIVPTVEHYGCLVDILCRAGHLQQAKNIIESMP---M 400
A ++G +EG K M +E K P V Y L+ LCR G +++A N+++ M +
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 401 RPNKVIWMSLLSSSRNHGNLEIGEYAAHNLIEAD--PDATGCYTLLSNIYAAAGKWDKVS 458
P+ + L+++ G L++ +I PD T+L+ + GK D+
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL-CKNGKADQAL 423
Query: 459 HVREMMKERGVLKDAGCS 476
+ G L + GCS
Sbjct: 424 EI------FGKLGEVGCS 435