Miyakogusa Predicted Gene

Lj2g3v3337520.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3337520.1 Non Chatacterized Hit- tr|K4CEZ3|K4CEZ3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,100,5e-16,no
description,Sterile alpha motif/pointed domain; SAM_DOMAIN,Sterile
alpha motif domain; SAM/Pointe,CUFF.40054.1
         (90 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07760.2 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   164   1e-41
AT3G07760.1 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   164   1e-41

>AT3G07760.2 | Symbols:  | Sterile alpha motif (SAM)
          domain-containing protein | chr3:2476723-2477947
          FORWARD LENGTH=125
          Length = 125

 Score =  164 bits (414), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 80/90 (88%)

Query: 1  MNKGQSPEPLDFFIWTVEDVGMWLESINLGSYRQMFKENGINGEYLEGMSMFTTEQILRF 60
          M +   PEPLDFFIWTVEDVG WLE INLG YRQ+FKENG+NGEYLE MS+FTTEQIL F
Sbjct: 1  MTREHPPEPLDFFIWTVEDVGSWLEEINLGGYRQIFKENGVNGEYLESMSVFTTEQILHF 60

Query: 61 IRRCHMKWGDFITLCKELRRIKVACLKGEQ 90
          IRR HMKWGDFITLCKELRRIKVACLKGEQ
Sbjct: 61 IRRHHMKWGDFITLCKELRRIKVACLKGEQ 90


>AT3G07760.1 | Symbols:  | Sterile alpha motif (SAM)
          domain-containing protein | chr3:2476723-2477947
          FORWARD LENGTH=125
          Length = 125

 Score =  164 bits (414), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 80/90 (88%)

Query: 1  MNKGQSPEPLDFFIWTVEDVGMWLESINLGSYRQMFKENGINGEYLEGMSMFTTEQILRF 60
          M +   PEPLDFFIWTVEDVG WLE INLG YRQ+FKENG+NGEYLE MS+FTTEQIL F
Sbjct: 1  MTREHPPEPLDFFIWTVEDVGSWLEEINLGGYRQIFKENGVNGEYLESMSVFTTEQILHF 60

Query: 61 IRRCHMKWGDFITLCKELRRIKVACLKGEQ 90
          IRR HMKWGDFITLCKELRRIKVACLKGEQ
Sbjct: 61 IRRHHMKWGDFITLCKELRRIKVACLKGEQ 90