Miyakogusa Predicted Gene

Lj2g3v3337330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3337330.1 tr|D0CKE0|D0CKE0_9SYNE
Phycoerythrobilin:ferredoxin oxidoreductase OS=Synechococcus sp. WH
8109 GN=p,26.75,8e-18,Fe_bilin_red,Ferredoxin-dependent bilin
reductase; RCC_reductase,Red chlorophyll catabolite
reductas,NODE_78091_length_1313_cov_15.439451.path2.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09150.2 | Symbols: HY2, GUN3 | phytochromobilin:ferredoxin o...   350   7e-97
AT3G09150.1 | Symbols: HY2, GUN3, ATHY2 | phytochromobilin:ferre...   341   4e-94
AT3G09150.3 | Symbols: HY2, GUN3 | phytochromobilin:ferredoxin o...   318   2e-87

>AT3G09150.2 | Symbols: HY2, GUN3 | phytochromobilin:ferredoxin
           oxidoreductase, chloroplast / phytochromobilin synthase
           (HY2) | chr3:2803665-2805333 FORWARD LENGTH=329
          Length = 329

 Score =  350 bits (898), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 160/283 (56%), Positives = 215/283 (75%)

Query: 37  SSVSYHKFVDFALDETSRHTHLVPSPLQEKFNSMNSKDGKGGLSMLSFQSAKIRLLRSLI 96
           S+VSY +F + AL+ET +   L PS LQEK++SM   DGK  L ML+F+S+KIRLLRS+ 
Sbjct: 47  SAVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKTELQMLAFKSSKIRLLRSMA 106

Query: 97  IETETMQVLDLAVFPNTEYDVPIFCANFFSTAKTNIVVLDLNPLHDIINQDDYKEKYFKS 156
           IE ETMQV D A F   EYD PIFCANFF++   NIVVLDLNPLH + +Q DY++KY+  
Sbjct: 107 IENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDLNPLHQLTDQTDYQDKYYNK 166

Query: 157 LIPLGLKYAELFPWGGKLTSESIRFFSPIVIWTKFTSSPQKYDILYSAFRDYYKVWLELI 216
           ++ +  KYAE FPWGGKLT ESI+FFSP+V+WT+F+SS +K+  L+SAF +YY+ WLE+ 
Sbjct: 167 IMSIYHKYAETFPWGGKLTGESIKFFSPLVMWTRFSSSKEKHKALFSAFLEYYQAWLEMT 226

Query: 217 DKAVEETDESQILRNLEAQHRYLTWRAEKDPGQGVLKKLIGDTLAKDLLINFLFNGVNEL 276
            +  EE + S +  N EAQH+YLTWRA+KDPG G+LK+L+G+  AK+LL +FLFNGV+EL
Sbjct: 227 IQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVGEAKAKELLRDFLFNGVDEL 286

Query: 277 GSKKFSDYFPHHSFEEGTLNKKGGVVLKSFENRPWNARGEFLG 319
           G+K F DYFP +  E+GT++ K  ++ KS+E RPW+  G+F+G
Sbjct: 287 GTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTGQFIG 329


>AT3G09150.1 | Symbols: HY2, GUN3, ATHY2 |
           phytochromobilin:ferredoxin oxidoreductase, chloroplast
           / phytochromobilin synthase (HY2) | chr3:2803665-2805333
           FORWARD LENGTH=327
          Length = 327

 Score =  341 bits (874), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 158/283 (55%), Positives = 213/283 (75%), Gaps = 2/283 (0%)

Query: 37  SSVSYHKFVDFALDETSRHTHLVPSPLQEKFNSMNSKDGKGGLSMLSFQSAKIRLLRSLI 96
           S+VSY +F + AL+ET +   L PS LQ  ++SM   DGK  L ML+F+S+KIRLLRS+ 
Sbjct: 47  SAVSYKEFAESALEETRKRIVLEPSHLQ--YSSMTGLDGKTELQMLAFKSSKIRLLRSMA 104

Query: 97  IETETMQVLDLAVFPNTEYDVPIFCANFFSTAKTNIVVLDLNPLHDIINQDDYKEKYFKS 156
           IE ETMQV D A F   EYD PIFCANFF++   NIVVLDLNPLH + +Q DY++KY+  
Sbjct: 105 IENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDLNPLHQLTDQTDYQDKYYNK 164

Query: 157 LIPLGLKYAELFPWGGKLTSESIRFFSPIVIWTKFTSSPQKYDILYSAFRDYYKVWLELI 216
           ++ +  KYAE FPWGGKLT ESI+FFSP+V+WT+F+SS +K+  L+SAF +YY+ WLE+ 
Sbjct: 165 IMSIYHKYAETFPWGGKLTGESIKFFSPLVMWTRFSSSKEKHKALFSAFLEYYQAWLEMT 224

Query: 217 DKAVEETDESQILRNLEAQHRYLTWRAEKDPGQGVLKKLIGDTLAKDLLINFLFNGVNEL 276
            +  EE + S +  N EAQH+YLTWRA+KDPG G+LK+L+G+  AK+LL +FLFNGV+EL
Sbjct: 225 IQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVGEAKAKELLRDFLFNGVDEL 284

Query: 277 GSKKFSDYFPHHSFEEGTLNKKGGVVLKSFENRPWNARGEFLG 319
           G+K F DYFP +  E+GT++ K  ++ KS+E RPW+  G+F+G
Sbjct: 285 GTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTGQFIG 327


>AT3G09150.3 | Symbols: HY2, GUN3 | phytochromobilin:ferredoxin
           oxidoreductase, chloroplast / phytochromobilin synthase
           (HY2) | chr3:2804085-2805333 FORWARD LENGTH=250
          Length = 250

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 143/250 (57%), Positives = 191/250 (76%)

Query: 70  MNSKDGKGGLSMLSFQSAKIRLLRSLIIETETMQVLDLAVFPNTEYDVPIFCANFFSTAK 129
           M   DGK  L ML+F+S+KIRLLRS+ IE ETMQV D A F   EYD PIFCANFF++  
Sbjct: 1   MTGLDGKTELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTN 60

Query: 130 TNIVVLDLNPLHDIINQDDYKEKYFKSLIPLGLKYAELFPWGGKLTSESIRFFSPIVIWT 189
            NIVVLDLNPLH + +Q DY++KY+  ++ +  KYAE FPWGGKLT ESI+FFSP+V+WT
Sbjct: 61  VNIVVLDLNPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWGGKLTGESIKFFSPLVMWT 120

Query: 190 KFTSSPQKYDILYSAFRDYYKVWLELIDKAVEETDESQILRNLEAQHRYLTWRAEKDPGQ 249
           +F+SS +K+  L+SAF +YY+ WLE+  +  EE + S +  N EAQH+YLTWRA+KDPG 
Sbjct: 121 RFSSSKEKHKALFSAFLEYYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGH 180

Query: 250 GVLKKLIGDTLAKDLLINFLFNGVNELGSKKFSDYFPHHSFEEGTLNKKGGVVLKSFENR 309
           G+LK+L+G+  AK+LL +FLFNGV+ELG+K F DYFP +  E+GT++ K  ++ KS+E R
Sbjct: 181 GLLKRLVGEAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETR 240

Query: 310 PWNARGEFLG 319
           PW+  G+F+G
Sbjct: 241 PWDLTGQFIG 250