Miyakogusa Predicted Gene

Lj2g3v3336120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3336120.1 Non Chatacterized Hit- tr|I1JJN6|I1JJN6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20506 PE,81.5,0,ARM
repeat,Armadillo-type fold; Armadillo/beta-catenin-like
repeats,Armadillo; Arm,Armadillo; HEAT,H,CUFF.40029.1
         (655 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51350.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   756   0.0  
AT5G49310.1 | Symbols: IMPA-5 | importin alpha isoform 5 | chr5:...    52   9e-07
AT1G02690.2 | Symbols: IMPA-6 | importin alpha isoform 6 | chr1:...    50   7e-06
AT1G02690.1 | Symbols: IMPA-6 | importin alpha isoform 6 | chr1:...    49   8e-06
AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | importi...    49   9e-06
AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, ...    49   9e-06

>AT1G51350.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:19035851-19038738 FORWARD LENGTH=666
          Length = 666

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/633 (59%), Positives = 485/633 (76%), Gaps = 2/633 (0%)

Query: 24  QVKLKAIREIKNQIIGNRTKKLSYIKXXXXXXXXXXXXXXXXXXXCGSSLIVQSAAALGS 83
           +VKLKA+RE+KNQIIGNRTKKLS++K                   C ++++VQSAAALGS
Sbjct: 34  EVKLKALREVKNQIIGNRTKKLSFLKLGAIPAIASVLADADDSDEC-NNILVQSAAALGS 92

Query: 84  FACGVDAGVRAVLDAGVFPHLIRLLSAADEKVVDAAARSLRMIYQSKLAPKFDFFHEANM 143
           FACG +AGV+AVLDAGVFPHL+RLL+  DEKVVDA ARSLRMI+QS  APK+DF  E NM
Sbjct: 93  FACGFEAGVQAVLDAGVFPHLLRLLTNTDEKVVDAGARSLRMIFQSNQAPKYDFLQEKNM 152

Query: 144 EFLLSLFKSENENLAGLGASIIIHSCETSDEQNVVCSAGALEKLMGLLDGSITQRDASLE 203
           EFL SL  SENEN++GLGASII H+C TS EQ V+C AG LEKL+ LLDGS++QR+A LE
Sbjct: 153 EFLFSLLNSENENVSGLGASIIAHACGTSVEQRVLCEAGVLEKLVILLDGSLSQREACLE 212

Query: 204 SLATILKNNLGAVSKFVELQNGRALSSVIELTKDRCPRTRLLACLCLICVKNSSSCYLQD 263
           SLAT+LKNN  AVS FV L++G+  +SV ELTKDR PRTRLL+CLCL+ + N+S  Y  +
Sbjct: 213 SLATVLKNNPEAVSDFVGLESGKYFNSVTELTKDRYPRTRLLSCLCLVVIYNTSPSYFIN 272

Query: 264 IGIKAKLIHILLELLDDSGQVGDEASFAFSSLLAEKEDLHKLAFEANAIDKLYNHLQNCA 323
           +G K+ LI  LLELL+D GQ GD+A+   S L+AEKEDL +LA+EA+AI  +   L+  +
Sbjct: 273 MGTKSSLITTLLELLNDPGQSGDDAALGLSCLIAEKEDLQQLAYEADAIKNIVEILKTGS 332

Query: 324 -LHPKRLEGIFLALANLCSKLECCRSKFLSLQVLNLLIDALTHDEANVRAAACICLRSVA 382
            L  KRL+G+FL+LA LCSKLE CR  FLSLQVL+LL DAL H +A+VRAAACIC R+ A
Sbjct: 333 ELQSKRLQGLFLSLAELCSKLEDCRCSFLSLQVLDLLTDALRHKDADVRAAACICFRNAA 392

Query: 383 RSVKNLSAGCFMNEKIVIPLFRLLSDHSTSVQVAALGAISNIVVDFKPHKSTFIQCGGIK 442
           RSVK+LSAG F ++ +++PL +LL D S+SVQVA LGA++NIV+DF   KS+FI+ GGIK
Sbjct: 393 RSVKSLSAGRFNSDHVMLPLVQLLHDPSSSVQVAVLGALNNIVMDFSSPKSSFIEYGGIK 452

Query: 443 ELVQFTKSMDSSLRLNAVWVLRNMVFLADKSCKEGIFMELTVSTLASLICDPEPSVQEQA 502
           +L + +KSMD + R +A+  LRN++FLAD   KE  + ++    LA LI DPEP VQEQA
Sbjct: 453 QLTELSKSMDPNTRCSALRALRNLMFLADIKRKELFYSDVKAQGLACLISDPEPPVQEQA 512

Query: 503 LALVRNFIDGSIDCIEYAFAGDGIILDAVGRQLQKSSKVEIGIQGMYTLSNIASGNEFHK 562
           LAL+RN +DG I  IE+ F  DG+ILD VGRQL+K+ + ++ IQGMY L+N+ASG E HK
Sbjct: 513 LALLRNLVDGCISSIEFVFDEDGLILDTVGRQLRKAPQAQMAIQGMYVLTNVASGTELHK 572

Query: 563 EAIMQLLFPQAEDGSNSFLSQFLQSNDNDLRASALWVIVNLTFPSSRGAFSRIVKLRNLG 622
           EA+M+ LFPQA+ GS +F+ +FLQS+++ LR++A+W I+NL  PSS GAF R VKLRN G
Sbjct: 573 EAVMEQLFPQAKAGSENFMLKFLQSDESQLRSAAVWTIINLISPSSPGAFDRHVKLRNAG 632

Query: 623 IVSQVKRMVNDSCMDVKLRARLALGHIITFGDS 655
           I+ Q+K MVND+C+DVK+R R  LG  ++FGD+
Sbjct: 633 IIPQLKNMVNDACLDVKIRIRTVLGQSMSFGDN 665


>AT5G49310.1 | Symbols: IMPA-5 | importin alpha isoform 5 |
           chr5:19992016-19994516 REVERSE LENGTH=519
          Length = 519

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 16/226 (7%)

Query: 427 DFKPHKSTFIQCGGIKELVQFTKSMDSS-LRLNAVWVLRNMVFLADKSCKEGIFMELTVS 485
           D  P     I+ G +   V+F K  D+  L+  A W L N+   A +  K  +     V 
Sbjct: 101 DRSPPTDNVIKSGVVPRFVEFLKKDDNPKLQFEAAWALTNIASGASEHTKV-VIDHGVVP 159

Query: 486 TLASLICDPEPSVQEQALALVRNFIDGSIDCIEYAFAGDGIILDAVGRQLQKSSKVEIGI 545
               L+  P+  V+EQA+  + N    SI C ++       I   +  QL   + + I  
Sbjct: 160 LFVQLLASPDDDVREQAIWGLGNVAGDSIQCRDFVLNSGAFI--PLLHQLNNHATLSILR 217

Query: 546 QGMYTLSNIASGNEFHKEAIMQLLFPQAEDGSNSFLSQFLQSNDNDLRASALWVIVNLTF 605
              +TLSN   G       +++ + P         L + + S+D  +   A W + NL+ 
Sbjct: 218 NATWTLSNFFRGKPSPPFDLVKHVLP--------VLKRLVYSDDEQVLIDACWALSNLSD 269

Query: 606 PSSRGAFSRIVKLRNLGIVSQVKRMVNDSCMDVKLRARLALGHIIT 651
            S+    S I      G+V ++  ++  +   V + A   +G+I++
Sbjct: 270 ASNENIQSVI----EAGVVPRLVELLQHASPVVLVPALRCIGNIVS 311


>AT1G02690.2 | Symbols: IMPA-6 | importin alpha isoform 6 |
           chr1:584397-587036 FORWARD LENGTH=539
          Length = 539

 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 27/283 (9%)

Query: 382 ARSVKNLSAGCFMNEKIVI-----PLF-RLLSDHSTSVQVAALGAISNIVVDFKPHKSTF 435
           A ++ N+++G   N +++I     PLF +LLS  S  V+  A+ A+ N+  D    +   
Sbjct: 141 AWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRDHV 200

Query: 436 IQCGGIKELV-QFTKSMDSSLRLNAVWVLRNMVFLADKSCKEGIFMELTVSTLAS---LI 491
           + C  +  L+ QF +    S+  NA W L N      +   +  F + T + L +   L+
Sbjct: 201 LSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFC----RGKPQPAFEQQTKAALPALERLL 256

Query: 492 CDPEPSVQEQALALVRNFIDGSIDCIEYAFAGDGIILDAVGRQLQKSSKVEIGIQGMYTL 551
              +  V   A   +    DG+ + I+      G+I   V  QL       + I  + T+
Sbjct: 257 HSTDEEVLTDASWALSYLSDGTNEKIQTVIDA-GVIPRLV--QLLAHPSPSVLIPALRTI 313

Query: 552 SNIASGNEFHKEAIMQLLFPQAEDGSNSFLSQFLQSNDNDLRASALWVIVNLTFPSSRGA 611
            NI +G++   +A++     QA  G    L+    +    ++  A W I N+T     G 
Sbjct: 314 GNIVTGDDIQTQAVIS---SQALPG---LLNLLKNTYKKSIKKEACWTISNITA----GN 363

Query: 612 FSRIVKLRNLGIVSQVKRMVNDSCMDVKLRARLALGHIITFGD 654
            S+I ++   GI+  +  ++     ++K  A  A+ +  + G+
Sbjct: 364 TSQIQEVFQAGIIRPLINLLEIGEFEIKKEAVWAISNATSGGN 406


>AT1G02690.1 | Symbols: IMPA-6 | importin alpha isoform 6 |
           chr1:584397-587036 FORWARD LENGTH=538
          Length = 538

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 22/280 (7%)

Query: 382 ARSVKNLSAGCFMNEKIVI-----PLF-RLLSDHSTSVQVAALGAISNIVVDFKPHKSTF 435
           A ++ N+++G   N +++I     PLF +LLS  S  V+  A+ A+ N+  D    +   
Sbjct: 141 AWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRDHV 200

Query: 436 IQCGGIKELV-QFTKSMDSSLRLNAVWVLRNMVFLADKSCKEGIFMELTVSTLASLICDP 494
           + C  +  L+ QF +    S+  NA W L N  F   K        +  +  L  L+   
Sbjct: 201 LSCEAMMSLLAQFHEHSKLSMLRNATWTLSN--FCRGKPQPAFEQTKAALPALERLLHST 258

Query: 495 EPSVQEQALALVRNFIDGSIDCIEYAFAGDGIILDAVGRQLQKSSKVEIGIQGMYTLSNI 554
           +  V   A   +    DG+ + I+      G+I   V  QL       + I  + T+ NI
Sbjct: 259 DEEVLTDASWALSYLSDGTNEKIQTVIDA-GVIPRLV--QLLAHPSPSVLIPALRTIGNI 315

Query: 555 ASGNEFHKEAIMQLLFPQAEDGSNSFLSQFLQSNDNDLRASALWVIVNLTFPSSRGAFSR 614
            +G++   +A++     QA  G    L+    +    ++  A W I N+T     G  S+
Sbjct: 316 VTGDDIQTQAVIS---SQALPG---LLNLLKNTYKKSIKKEACWTISNITA----GNTSQ 365

Query: 615 IVKLRNLGIVSQVKRMVNDSCMDVKLRARLALGHIITFGD 654
           I ++   GI+  +  ++     ++K  A  A+ +  + G+
Sbjct: 366 IQEVFQAGIIRPLINLLEIGEFEIKKEAVWAISNATSGGN 405


>AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | importin
           alpha isoform 1 | chr3:2120559-2123555 FORWARD
           LENGTH=532
          Length = 532

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 25/312 (8%)

Query: 214 GAVSKFVELQNGRALSSVIELTKDRCPRTRLLACLCLICVKNSSSCYLQDIGIKAKLIHI 273
           G V +FVE            L K+  P  +  A   L  + + +S + + + I    + I
Sbjct: 115 GVVPRFVEF-----------LKKEDYPAIQFEAAWALTNIASGTSDHTK-VVIDHNAVPI 162

Query: 274 LLELL-DDSGQVGDEASFAFSSLLAEKEDLHKLAFEANAIDKLYNHLQNCALHPK--RLE 330
            ++LL   S  V ++A +A  ++  +      L     A+  L N L     H K   L 
Sbjct: 163 FVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNE---HAKLSMLR 219

Query: 331 GIFLALANLCSKLECCRSKFLSLQVLNLLIDALTH-DEANVRAAACICLRSVARSVKNLS 389
                L+N C      +  F  ++     ++ L H D+  V   AC  L  ++    N  
Sbjct: 220 NATWTLSNFCRGKP--QPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGT-NDK 276

Query: 390 AGCFMNEKIVIPLFRLLSDHSTSVQVAALGAISNIVVDFKPHKSTFIQCGGIKELVQ-FT 448
               +   +V  L  LL  HS SV + AL  + NIV          I  G +  L    T
Sbjct: 277 IQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLT 336

Query: 449 KSMDSSLRLNAVWVLRNMVFLADKSCKEGIFMELTVSTLASLICDPEPSVQEQALALVRN 508
           ++   S++  A W + N+    +K   + +     +S L SL+ + E  ++++A   + N
Sbjct: 337 QNHKKSIKKEACWTISNIT-AGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISN 395

Query: 509 FID-GSIDCIEY 519
               GS D I+Y
Sbjct: 396 ATSGGSHDQIKY 407


>AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1,
           IMPA1 | importin alpha isoform 1 | chr3:2120559-2123555
           FORWARD LENGTH=532
          Length = 532

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 25/312 (8%)

Query: 214 GAVSKFVELQNGRALSSVIELTKDRCPRTRLLACLCLICVKNSSSCYLQDIGIKAKLIHI 273
           G V +FVE            L K+  P  +  A   L  + + +S + + + I    + I
Sbjct: 115 GVVPRFVEF-----------LKKEDYPAIQFEAAWALTNIASGTSDHTK-VVIDHNAVPI 162

Query: 274 LLELL-DDSGQVGDEASFAFSSLLAEKEDLHKLAFEANAIDKLYNHLQNCALHPK--RLE 330
            ++LL   S  V ++A +A  ++  +      L     A+  L N L     H K   L 
Sbjct: 163 FVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNE---HAKLSMLR 219

Query: 331 GIFLALANLCSKLECCRSKFLSLQVLNLLIDALTH-DEANVRAAACICLRSVARSVKNLS 389
                L+N C      +  F  ++     ++ L H D+  V   AC  L  ++    N  
Sbjct: 220 NATWTLSNFCRGKP--QPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGT-NDK 276

Query: 390 AGCFMNEKIVIPLFRLLSDHSTSVQVAALGAISNIVVDFKPHKSTFIQCGGIKELVQ-FT 448
               +   +V  L  LL  HS SV + AL  + NIV          I  G +  L    T
Sbjct: 277 IQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLT 336

Query: 449 KSMDSSLRLNAVWVLRNMVFLADKSCKEGIFMELTVSTLASLICDPEPSVQEQALALVRN 508
           ++   S++  A W + N+    +K   + +     +S L SL+ + E  ++++A   + N
Sbjct: 337 QNHKKSIKKEACWTISNIT-AGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISN 395

Query: 509 FID-GSIDCIEY 519
               GS D I+Y
Sbjct: 396 ATSGGSHDQIKY 407