Miyakogusa Predicted Gene

Lj2g3v3319260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3319260.1 gene.g44569.t1.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17030.1 | Symbols:  | F-box family protein with a domain of ...   119   3e-27
AT2G17036.1 | Symbols:  | F-box family protein with a domain of ...    90   1e-18
AT5G24040.1 | Symbols:  | Protein of unknown function (DUF295) |...    60   1e-09
AT5G60060.1 | Symbols:  | Protein of unknown function (DUF295) |...    55   6e-08
AT2G16290.1 | Symbols:  | F-box family protein with a domain of ...    54   1e-07
AT5G24040.2 | Symbols:  | Protein of unknown function (DUF295) |...    52   3e-07
AT2G24250.2 | Symbols:  | Protein of unknown function (DUF295) |...    51   1e-06
AT2G24250.1 | Symbols:  | Protein of unknown function (DUF295) |...    51   1e-06

>AT2G17030.1 | Symbols:  | F-box family protein with a domain of
           unknown function (DUF295) | chr2:7399108-7400650 FORWARD
           LENGTH=407
          Length = 407

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 126/264 (47%), Gaps = 42/264 (15%)

Query: 42  RVLDLYNLPVIDLGNVFVLHRSPPAHRPCHRYSIVMTKVAAAITVSCQGKQEVSILLMVH 101
           RVLD+    V +LG  F LH            S+ + K A    + C G  +  +LL +H
Sbjct: 125 RVLDMSKFKVRELGREFKLHYFNTVGDIVE--SLYLEK-AVVKYLDCDGDYKF-VLLTIH 180

Query: 102 QSQNKLTYFRFSEGCWTITPEEFPPYDDVCVFNGRPCAVHFAGRTVPVG-SGPDLDLVAK 160
            S  KL  FR  +  WT+  +   PYDDV +F+GR  AV   GRTV V  S   L LVA 
Sbjct: 181 VS-GKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVAS 239

Query: 161 PVLGKNRKFLVESEGSLLLVH--------------------------KRRIFTYQVFRLD 194
           PV G ++KFL+ES G +LLV                             R   ++V+R  
Sbjct: 240 PVFGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFYMNERTVKFKVYRFV 299

Query: 195 EKERSWVEVKSLGDRVLFLGDLCTFSASASDLRVDRGNCVVFEDSNMKGG---------- 244
           E+E SWV+V  L D++LFLGD  TFSASASD+        VF + N+  G          
Sbjct: 300 EREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFNGNVFNGEDLGAMQDRD 359

Query: 245 VGVFPLDVGQASPLSDHPDYSRLF 268
           +GVF    G+   +   P+Y++LF
Sbjct: 360 LGVFDFRSGKIELVQKLPEYAKLF 383


>AT2G17036.1 | Symbols:  | F-box family protein with a domain of
           unknown function (DUF295) | chr2:7403856-7405219 FORWARD
           LENGTH=428
          Length = 428

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 41/210 (19%)

Query: 96  ILLMVHQSQNKLTYFRFSEGCWTITPEEFPPY-DDVCVFNGRPCAVHFAGRTVPVG-SGP 153
            +L+      KL  FR  +  WT+  +  P    D+ +F+GR  A+ + GRTV V  S  
Sbjct: 171 FVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSF 230

Query: 154 DLDLVAKPVLGK-NRKFLVESEGSLLLV------HKRRIFT---------------YQVF 191
            L L A P++G  ++KFL+ES G + LV      +++  FT               ++ F
Sbjct: 231 KLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSYFNETTVSYKFKFF 290

Query: 192 RLDEKERSWVEVKSLGDRVLFLGDLCTFSASASDL-------------RVDRGNCVVFED 238
           +L E+E+ WVEV+ LGD++ FLGD  TFSAS +D+                  + VV +D
Sbjct: 291 KLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHEESLVVMDD 350

Query: 239 SNMKGGVGVFPLDVGQASPLSDHPDYSRLF 268
            N+    GVF    G+   ++  P+Y++LF
Sbjct: 351 RNL----GVFDFRSGKTELVNKLPEYAKLF 376


>AT5G24040.1 | Symbols:  | Protein of unknown function (DUF295) |
           chr5:8126045-8127336 REVERSE LENGTH=373
          Length = 373

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 36/260 (13%)

Query: 38  IYCSRVLDLYNLPVIDLGNVFVLHRSPPAHRPCHRYSIVMTKVAAAITVSCQGKQEVSIL 97
           +Y S  +DL N  + +L    V       +         ++K    I      +++   +
Sbjct: 114 LYPSLSIDLLNCQIFELAQEHV-----ACYSEWFELFECISKCEERIGFMGLNREKNEYM 168

Query: 98  LMVHQSQNKLTYFRFSEGCWT---ITPEEFPPYDDVCVFNGRPCAVHFAGRTVPVGSGPD 154
           ++   S N L  +R  +  WT   ITP+ F  ++ +  F G+  A+   G+T  V    +
Sbjct: 169 ILGKLSFNGLAMYRSVDNRWTELEITPDSF--FEGIVPFKGKFYAIDRTGKTTVVDPTLE 226

Query: 155 LDLV--AKPVLGKNRKFLVESEGSLLLVH--------------KRRIFTYQVFRLDEKER 198
           ++    ++P     +++L+ +   L+LV               + +   +++  L+E+  
Sbjct: 227 VNTFQRSRPCDKTRKRWLLMTGDKLILVEMCTKSRYDFHIPNIREKKIWFEISELNEERN 286

Query: 199 SWVEVKSLGDRVLFLGDLCTFSASASDLRVDRGNCVVFEDSNMKGG--------VGVFPL 250
            W +V+ +  RVLFL   CTFS  A+++   R N ++F D  + GG        + V+  
Sbjct: 287 DWDQVEDMDGRVLFLEHYCTFSCLATEIPGFRANSIIFMD--LWGGSNSYELESILVYEF 344

Query: 251 DVGQASPLSDHPDYSRLFDY 270
           +      L D  +Y  LF +
Sbjct: 345 NEKGVRSLRDKLEYIELFPF 364


>AT5G60060.1 | Symbols:  | Protein of unknown function (DUF295) |
           chr5:24188600-24189724 REVERSE LENGTH=374
          Length = 374

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 32/200 (16%)

Query: 93  EVSILLMVHQSQNKLTYFRF-SEGCWTITPEEFPP-YDDVCVFNGRPC-AVHFAGRTVPV 149
           E S ++ +H S  KL + +  ++  W I    +   Y+D+ ++    C  V   G+TV  
Sbjct: 176 EDSAIIAIH-SGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDKGKTVIY 234

Query: 150 GSGPDLDLVAKPVLGK--NRKFLVE-SEGSLLLVHK------------RRIFTYQVFRLD 194
                +  +A+ ++G   ++K LVE S G + LV K            + +  ++V+ L 
Sbjct: 235 DVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTVWCKSDISKSVVEFRVYNLK 294

Query: 195 EKERSWVEVKSLGDRVLFLGDLCTFSAS--ASDLRVDRGNCVVFEDSNMKG--------G 244
            +E+ W EV+ LGD  LF+GD C+FS    A DL    G  + + D    G        G
Sbjct: 295 REEKRWEEVRDLGDVALFIGDDCSFSVQNPAGDL---AGGFIFYSDYRNGGRSRGICSDG 351

Query: 245 VGVFPLDVGQASPLSDHPDY 264
            GVF +D+      S  P+Y
Sbjct: 352 DGVFNVDMQGDFVFSIKPNY 371


>AT2G16290.1 | Symbols:  | F-box family protein with a domain of
           unknown function (DUF295) | chr2:7058930-7060573 REVERSE
           LENGTH=415
          Length = 415

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 18/153 (11%)

Query: 106 KLTYFRFSEGCWTITPE--EFPPYDDVCVFNGRPCAVHFAGRTVPVGSGPDLDLVAKPVL 163
            L  +R     WT   E  E   Y D+  F G+  A+  +GR         L +   P +
Sbjct: 205 NLVMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSV 264

Query: 164 GKN----RKFLVESEGSLLLVHK-----RR----IFTY-QVFRLDEK--ERSWVEVKSLG 207
             +    ++ LV+    LLLV +     RR    I+T+ +VFRLDE+  +R WV+V  L 
Sbjct: 265 KGSQYCSKESLVQLGEELLLVQRFIPAGRRYDEYIYTWFKVFRLDEEGGKRKWVQVNYLN 324

Query: 208 DRVLFLGDLCTFSASASDLRVDRGNCVVFEDSN 240
           DRV+FLG       S   L     NC+VF  SN
Sbjct: 325 DRVIFLGARTKLCCSVHKLPGANENCIVFLASN 357


>AT5G24040.2 | Symbols:  | Protein of unknown function (DUF295) |
           chr5:8126045-8127010 REVERSE LENGTH=216
          Length = 216

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 31/181 (17%)

Query: 117 WT---ITPEEFPPYDDVCVFNGRPCAVHFAGRTVPVGSGPDLDLV--AKPVLGKNRKFLV 171
           WT   ITP+ F  ++ +  F G+  A+   G+T  V    +++    ++P     +++L+
Sbjct: 31  WTELEITPDSF--FEGIVPFKGKFYAIDRTGKTTVVDPTLEVNTFQRSRPCDKTRKRWLL 88

Query: 172 ESEGSLLLVH--------------KRRIFTYQVFRLDEKERSWVEVKSLGDRVLFLGDLC 217
            +   L+LV               + +   +++  L+E+   W +V+ +  RVLFL   C
Sbjct: 89  MTGDKLILVEMCTKSRYDFHIPNIREKKIWFEISELNEERNDWDQVEDMDGRVLFLEHYC 148

Query: 218 TFSASASDLRVDRGNCVVFEDSNMKGG--------VGVFPLDVGQASPLSDHPDYSRLFD 269
           TFS  A+++   R N ++F D  + GG        + V+  +      L D  +Y  LF 
Sbjct: 149 TFSCLATEIPGFRANSIIFMD--LWGGSNSYELESILVYEFNEKGVRSLRDKLEYIELFP 206

Query: 270 Y 270
           +
Sbjct: 207 F 207


>AT2G24250.2 | Symbols:  | Protein of unknown function (DUF295) |
           chr2:10313436-10314560 REVERSE LENGTH=374
          Length = 374

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 129 DVCVFNGRPCAVHFAGRTVPVGSGPDLDLVAKPVLGK-NRKFLVESEGSLLLVHKRRIFT 187
           ++  F GR  A  F G T  +       L A P+    +  FLV S    L + K     
Sbjct: 212 ELFTFRGRFYATFFNGDTFVIDPS---SLEATPLTPHIDSNFLVPSGNEELFLVKTDFLR 268

Query: 188 YQVFRLDEKERSWVEVKSLGDRVLFLGD-LCTFSASASDL 226
            +V RLDE+   WVEV  LGDRVLFLG  L  F  SA +L
Sbjct: 269 CRVSRLDEEAAEWVEVSDLGDRVLFLGGHLGNFYCSAKEL 308


>AT2G24250.1 | Symbols:  | Protein of unknown function (DUF295) |
           chr2:10313436-10314560 REVERSE LENGTH=374
          Length = 374

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 129 DVCVFNGRPCAVHFAGRTVPVGSGPDLDLVAKPVLGK-NRKFLVESEGSLLLVHKRRIFT 187
           ++  F GR  A  F G T  +       L A P+    +  FLV S    L + K     
Sbjct: 212 ELFTFRGRFYATFFNGDTFVIDPS---SLEATPLTPHIDSNFLVPSGNEELFLVKTDFLR 268

Query: 188 YQVFRLDEKERSWVEVKSLGDRVLFLGD-LCTFSASASDL 226
            +V RLDE+   WVEV  LGDRVLFLG  L  F  SA +L
Sbjct: 269 CRVSRLDEEAAEWVEVSDLGDRVLFLGGHLGNFYCSAKEL 308