Miyakogusa Predicted Gene

Lj2g3v3318880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3318880.1 Non Chatacterized Hit- tr|B9QI45|B9QI45_TOXGO
Putative uncharacterized protein OS=Toxoplasma gondii
,34.66,5e-19,Got1,Vesicle transport protein, Got1/SFT2-like;
UNCHARACTERIZED,Vesicle transport protein, SFT2-like,CUFF.39994.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26550.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...   288   2e-78
AT5G56020.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...   282   2e-76

>AT4G26550.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr4:13402755-13404208 REVERSE LENGTH=225
          Length = 225

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 141/198 (71%), Positives = 163/198 (82%)

Query: 31  WNSYASSTSQDTSNSGIAFDLESAVRSANNTVTGTFNVVSKGVRDIPGNFQSATSSLPSG 90
           WNSYA+S   + S     FD+ESAVRSAN+TV+GTF+VVSKGVRDIPG+ QSATSS+PSG
Sbjct: 28  WNSYAASRDFEESGGSFGFDIESAVRSANDTVSGTFSVVSKGVRDIPGSLQSATSSMPSG 87

Query: 91  KALVYFALLLASGVFFIFIAFTLFLPVIVVLPQKFAICFTLGCGFIIGSFFALKGPKNQL 150
           KAL+YF LLLASGVFFIFIAFT+FLPV+V++PQKFAICFTLGCGFIIGSFFAL+GPKNQL
Sbjct: 88  KALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPKNQL 147

Query: 151 AHMMSAERLPFTVGFICSMIGTIYVSMVRHSYIXXXXXXXXXXXXXGYYSISYFPGGSAG 210
           AHM S ERLP T+GFI +M+GTIYVSMV HSYI              YY ISYFPGGS+G
Sbjct: 148 AHMSSMERLPSTLGFIATMVGTIYVSMVLHSYILSVLFSVLQVLALVYYCISYFPGGSSG 207

Query: 211 MRFLTSSITSRIMNCFGR 228
           MRFL+S++TS  +  FGR
Sbjct: 208 MRFLSSALTSSALRVFGR 225


>AT5G56020.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr5:22684586-22686206 FORWARD LENGTH=230
          Length = 230

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/198 (69%), Positives = 161/198 (81%), Gaps = 3/198 (1%)

Query: 31  WNSYASSTSQDTSNSGIAFDLESAVRSANNTVTGTFNVVSKGVRDIPGNFQSATSSLPSG 90
           WNSYA+S   +     + FD+ESAVRSAN+TV+GTFNVVSKGVRD   N QSATSS+PSG
Sbjct: 36  WNSYAASRDFEEDTGTLGFDIESAVRSANDTVSGTFNVVSKGVRD---NLQSATSSMPSG 92

Query: 91  KALVYFALLLASGVFFIFIAFTLFLPVIVVLPQKFAICFTLGCGFIIGSFFALKGPKNQL 150
           KAL+YF LLLASGVFFIFIAFT+FLPV+V++PQKFAICFTLGCGFIIGSFFAL+GP+NQL
Sbjct: 93  KALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPQNQL 152

Query: 151 AHMMSAERLPFTVGFICSMIGTIYVSMVRHSYIXXXXXXXXXXXXXGYYSISYFPGGSAG 210
           AHM SAERLP T+GFI +M+GTIYVSMV HSYI              YY ISYFPGGS+G
Sbjct: 153 AHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSG 212

Query: 211 MRFLTSSITSRIMNCFGR 228
           M+FL+S++TS +   FGR
Sbjct: 213 MKFLSSTLTSSVFRMFGR 230