Miyakogusa Predicted Gene

Lj2g3v3292420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3292420.2 tr|G7KEH1|G7KEH1_MEDTR Nicotinamide
mononucleotide adenylyltransferase OS=Medicago truncatula
GN=MTR,90.37,0,no description,Rossmann-like alpha/beta/alpha sandwich
fold; CTP_transf_2,Cytidylyltransferase; Nucl,CUFF.39953.2
         (134 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55810.1 | Symbols: AtNMNAT, NMNAT | nicotinate/nicotinamide ...   180   3e-46
AT5G55810.2 | Symbols: NMNAT | nicotinate/nicotinamide mononucle...   106   4e-24

>AT5G55810.1 | Symbols: AtNMNAT, NMNAT | nicotinate/nicotinamide
           mononucleotide adenyltransferase |
           chr5:22584229-22586239 REVERSE LENGTH=238
          Length = 238

 Score =  180 bits (456), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 7/121 (5%)

Query: 1   MDVPLPLDKLALELISNEPSPGNTSKIYVILVATGSFNPPTFMHLRMFELARDALNSKGY 60
           MDVPLP++KL+              K  V+LVATGSFNPPTFMHLRMFELARD L SKG+
Sbjct: 1   MDVPLPVEKLSY-------GSNTEDKTCVVLVATGSFNPPTFMHLRMFELARDELRSKGF 53

Query: 61  CVIGGYMSPVNDAYKKKNLISAEHRIRLCNLACKSSEFVMVDPWEANQSTYQRTLTVLSR 120
            V+GGYMSPVNDAYKKK L+SAEHR+ +CN++C+SS+FVMVDPWEA+QS YQRTLTVLSR
Sbjct: 54  HVLGGYMSPVNDAYKKKGLLSAEHRLEMCNVSCQSSDFVMVDPWEASQSNYQRTLTVLSR 113

Query: 121 V 121
           V
Sbjct: 114 V 114


>AT5G55810.2 | Symbols: NMNAT | nicotinate/nicotinamide
          mononucleotide adenyltransferase |
          chr5:22584229-22586239 REVERSE LENGTH=264
          Length = 264

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 7/82 (8%)

Query: 1  MDVPLPLDKLALELISNEPSPGNTSKIYVILVATGSFNPPTFMHLRMFELARDALNSKGY 60
          MDVPLP++KL+              K  V+LVATGSFNPPTFMHLRMFELARD L SKG+
Sbjct: 1  MDVPLPVEKLSY-------GSNTEDKTCVVLVATGSFNPPTFMHLRMFELARDELRSKGF 53

Query: 61 CVIGGYMSPVNDAYKKKNLISA 82
           V+GGYMSPVNDAYKKK +  A
Sbjct: 54 HVLGGYMSPVNDAYKKKIMCRA 75