Miyakogusa Predicted Gene
- Lj2g3v3281380.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3281380.2 Non Chatacterized Hit- tr|I1NBH8|I1NBH8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54090
PE,32.73,7e-18,Ion_trans_2,Ion transport 2; no description,NULL;
Voltage-gated potassium channels,NULL; PROBABLE CA,CUFF.39949.2
(178 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55630.2 | Symbols: KCO1, TPK1 | Outward rectifying potassium... 181 2e-46
AT5G55630.1 | Symbols: KCO1, TPK1, ATKCO1, ATTPK1 | Outward rect... 181 2e-46
AT4G01840.1 | Symbols: KCO5, ATTPK5, ATKCO5, TPK5 | Ca2+ activat... 89 2e-18
AT4G18160.1 | Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activat... 80 1e-15
AT1G02510.1 | Symbols: KCO4, ATKCO4, ATTPK4, TPK4 | Outward rect... 75 2e-14
AT5G46370.1 | Symbols: KCO2, ATTPK2, ATKCO2 | Ca2+ activated out... 75 3e-14
>AT5G55630.2 | Symbols: KCO1, TPK1 | Outward rectifying potassium
channel protein | chr5:22531718-22532893 FORWARD
LENGTH=363
Length = 363
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 116/145 (80%), Gaps = 5/145 (3%)
Query: 28 LDPPETNGNKLIPLSGSIFGSLHPSFRKVALCLAVYVGVGALAFYLVRNQIKGLKTNRFL 87
+D P + +K IP+ F L+P+ R+V + LA+Y+ +G L FYLVR+QI G KT+ +
Sbjct: 56 IDEPPPHPSK-IPM----FSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVV 110
Query: 88 DALYFTIVTMTTVGYGDLVPNSNLTKLLACAFVFSGMAVVGLILSKAADYLVEKQEALLV 147
DALYF IVTMTTVGYGDLVPNS+ ++LLACAFVFSGM +VG +LS+AADYLVEKQEALLV
Sbjct: 111 DALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLV 170
Query: 148 KAMHMRENFGPSEILKEIETNKTSF 172
+A H+R++FGP++ILKE+ TNK +
Sbjct: 171 RAFHLRQSFGPTDILKELHTNKLRY 195
>AT5G55630.1 | Symbols: KCO1, TPK1, ATKCO1, ATTPK1 | Outward
rectifying potassium channel protein |
chr5:22531718-22532893 FORWARD LENGTH=363
Length = 363
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 116/145 (80%), Gaps = 5/145 (3%)
Query: 28 LDPPETNGNKLIPLSGSIFGSLHPSFRKVALCLAVYVGVGALAFYLVRNQIKGLKTNRFL 87
+D P + +K IP+ F L+P+ R+V + LA+Y+ +G L FYLVR+QI G KT+ +
Sbjct: 56 IDEPPPHPSK-IPM----FSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVV 110
Query: 88 DALYFTIVTMTTVGYGDLVPNSNLTKLLACAFVFSGMAVVGLILSKAADYLVEKQEALLV 147
DALYF IVTMTTVGYGDLVPNS+ ++LLACAFVFSGM +VG +LS+AADYLVEKQEALLV
Sbjct: 111 DALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLV 170
Query: 148 KAMHMRENFGPSEILKEIETNKTSF 172
+A H+R++FGP++ILKE+ TNK +
Sbjct: 171 RAFHLRQSFGPTDILKELHTNKLRY 195
>AT4G01840.1 | Symbols: KCO5, ATTPK5, ATKCO5, TPK5 | Ca2+ activated
outward rectifying K+ channel 5 | chr4:793403-794933
FORWARD LENGTH=408
Length = 408
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 4 SAQKARLQLKKRRLIRSRSAPQT----DL--DPPETNGNKLIPLSGSIFGSLHPSFRKVA 57
S + R + R L RSR+AP DL PPET K P+S SI R+
Sbjct: 71 SDETNRFLSQTRPLHRSRTAPAMVIIKDLRTKPPETK--KPSPVSKSII-------RQAI 121
Query: 58 LCLAVYVGVGALAFYLVRNQIKGLKTNRFLDALYFTIVTMTTVGYGDLVPNSNLTKLLAC 117
L VY+ +G + R+ G++T+ +DALYF IVTM T+GYGD+ P + TK+ A
Sbjct: 122 FLLIVYLTLGVSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAV 181
Query: 118 AFVFSGMAVVGLILSKAADYLVEKQEALLVKAMHMR 153
FV G + ++LS +Y+++ QE++++ + R
Sbjct: 182 VFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTR 217
>AT4G18160.1 | Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activated
outward rectifying K+ channel 6 | chr4:10055696-10057546
FORWARD LENGTH=436
Length = 436
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 54 RKVALCLAVYVGVGALAFYLVRNQIKGLKTNRFLDALYFTIVTMTTVGYGDLVPNSNLTK 113
R+ L VY+ +G L ++L R+ +T+ +D LYF IVTM T+GYGD+ PNS +TK
Sbjct: 151 RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTK 210
Query: 114 LLACAFVFSGMAVVGLILSKAADYLVEKQEALLVKAMHMREN 155
L + FV G + ++LS Y+++ QE+ ++ + R+
Sbjct: 211 LFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKRRDE 252
>AT1G02510.1 | Symbols: KCO4, ATKCO4, ATTPK4, TPK4 | Outward
rectifying potassium channel protein |
chr1:520687-521626 REVERSE LENGTH=284
Length = 284
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 60/98 (61%)
Query: 58 LCLAVYVGVGALAFYLVRNQIKGLKTNRFLDALYFTIVTMTTVGYGDLVPNSNLTKLLAC 117
+ L VY+ G + R+Q G +TN F+DA YF+IVT +TVGYGD+VP+++ TK+L
Sbjct: 40 ILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVTFSTVGYGDIVPSTSTTKILTI 99
Query: 118 AFVFSGMAVVGLILSKAADYLVEKQEALLVKAMHMREN 155
V +G+ + +L++ +++ QE ++ ++ N
Sbjct: 100 VLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRN 137
>AT5G46370.1 | Symbols: KCO2, ATTPK2, ATKCO2 | Ca2+ activated
outward rectifying K+ channel 2 | chr5:18809623-18811720
REVERSE LENGTH=443
Length = 443
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 54 RKVALCLAVYVGVGALAFYLVRNQIKGLKTNRFLDALYFTIVTMTTVGYGDLVPNSNLTK 113
+ VAL L VY+ +G L ++L R+ +T+ +DALYF IVTM T+GYGD+ P+S +TK
Sbjct: 148 QAVAL-LVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTK 206
Query: 114 LLACAFVFSGMAVVGLILSKAADYLVEKQEALLVK 148
L + FV G + ++LS Y+++ QE +++
Sbjct: 207 LFSIFFVLVGFGFMDILLSGMVTYVLDLQENYMLE 241