Miyakogusa Predicted Gene

Lj2g3v3261210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3261210.1 Non Chatacterized Hit- tr|K4CBI5|K4CBI5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,66.67,0.0004,
,FS356137.path2.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46920.1 | Symbols:  | Protein kinase superfamily protein wit...    49   9e-07

>AT3G46920.1 | Symbols:  | Protein kinase superfamily protein with
           octicosapeptide/Phox/Bem1p domain |
           chr3:17280430-17284857 REVERSE LENGTH=1171
          Length = 1171

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/30 (70%), Positives = 26/30 (86%)

Query: 1   MLDSPRGSVETITKYMVNGSLRNDMQRNDR 30
           +LDSP GSV T+T+YMVNGSLRN +Q+N R
Sbjct: 958 VLDSPGGSVATVTEYMVNGSLRNALQKNVR 987