Miyakogusa Predicted Gene
- Lj2g3v3244690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3244690.1 tr|Q9LUV4|Q9LUV4_ARATH FRIGIDA-like protein
OS=Arabidopsis thaliana GN=At3g22440 PE=2 SV=1,29.57,6e-19,FAMILY NOT
NAMED,NULL; seg,NULL;
Frigida,Frigida-like,NODE_48423_length_1165_cov_56.521030.path1.1
(281 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345... 104 8e-23
AT3G22440.1 | Symbols: | FRIGIDA-like protein | chr3:7959854-79... 97 1e-20
AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 | chr1:11412985-114... 93 2e-19
AT5G48385.1 | Symbols: | FRIGIDA-like protein | chr5:19609471-1... 91 9e-19
AT4G14900.1 | Symbols: | FRIGIDA-like protein | chr4:8521759-85... 89 4e-18
AT5G27230.1 | Symbols: | Frigida-like protein | chr5:9584255-95... 74 1e-13
AT5G27220.1 | Symbols: | Frigida-like protein | chr5:9578757-95... 50 1e-06
>AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345919
FORWARD LENGTH=470
Length = 470
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 3 SELTMNELATFSFMASANDQISELTLIAGLADKVPG-LVQKLIDRGKHVLAVKYIFGFNL 61
SE EL+ + FM + Q + + G+ K G L++ L+D GK +LAVK+++ +
Sbjct: 223 SEFDTEELSDYVFMIAKYKQATLVCNKIGVDRKRVGKLIKTLLDSGKPILAVKFMYECGM 282
Query: 62 VDKFPPVPILKAHVNESEKLGRRLAHEG----KSVKEITAREINALKSVIKVIENHNLES 117
D+F P+P+LK+++ + + R+ E KS E + +E++ALK +IK+I++ NLES
Sbjct: 283 TDEFEPIPVLKSYIKDCREAALRVCVEDNYSLKSQNEASDKEVSALKPLIKIIKDQNLES 342
Query: 118 EFPTTSIEQRIEELKKLKTTPAF-AAKPPQHQQQQSGIKRPRISAPVGPXXXXXXXXXXX 176
EF +E+R+EEL+K K PP+ + QQ G KR R
Sbjct: 343 EFTQEKVEERVEELEKNKALRKRNTTNPPKQEPQQKGKKRTR-----------DCKNGSQ 391
Query: 177 XXINQYQQPHFQSTGLLPEHSNPYMNLPPLPYGVMAPTPTVPSYTG----PSTGPYGIDG 232
+ Q L+PEHS+ + L PYG+M +++G P TG +G
Sbjct: 392 VPVPSQQLLSRPEALLMPEHSHHGLQLN--PYGLM-----TSAFSGVVVNPLTGLFGSGA 444
Query: 233 VP 234
P
Sbjct: 445 TP 446
>AT3G22440.1 | Symbols: | FRIGIDA-like protein |
chr3:7959854-7961886 FORWARD LENGTH=532
Length = 532
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 22 QISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKL 81
Q+ +L + GL D++P ++++LI RG+ + AV + + LVDKFPPVP+LKA++ +++K
Sbjct: 289 QMPKLAVSVGLGDQMPDMIEELISRGQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKS 348
Query: 82 GRRLAHE----GKSVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLKTT 137
+ + G++ + +E +ALK+V+K IE + LE EFP ++++R+++L+K KT
Sbjct: 349 AASIMEDSSNTGRATHLVARKEQSALKAVLKCIEEYKLEEEFPPENLKKRLDQLEKTKTE 408
Query: 138 PAFAAKPPQHQQQQSGIKRPRISAPVG 164
A P +++ ++ P A G
Sbjct: 409 KRKPAAVPANKRTRASYNGPMPPAKAG 435
>AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 |
chr1:11412985-11414406 REVERSE LENGTH=473
Length = 473
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 3 SELTMNELATFSFMASANDQISELTLIAGL-ADKVPGLVQKLIDRGKHVLAVKYIFGFNL 61
S + E+ + F+ S Q + + GL +++ LVQK +D G+ ++A+++I+ +
Sbjct: 216 SLFSTEEICDYIFLISKYKQATTICKKIGLDRNRIGVLVQKFLDTGRLLVAIRFIYENEM 275
Query: 62 VDKFPPVPILKAHVNESEKLGRRLAHEG----KSVKEITAREINALKSVIKVIENHNLES 117
V +F PV ILK + S + +R+ EG K E T +E++AL++VIKV++ N+ES
Sbjct: 276 VGEFEPVSILKTSLKNSREAAKRVCAEGNYSLKVQNEATDKELSALRAVIKVVKEKNIES 335
Query: 118 EFPTTSIEQRIEELKKLKTTPAFAAK------PPQHQQQQSGIKRPRIS 160
EF +E+ ++EL+ K A K P Q Q+Q+ KRPR++
Sbjct: 336 EFMEEKLEECVKELEDQKAQRKRATKFNSPANPQQPQEQKVDNKRPRVA 384
>AT5G48385.1 | Symbols: | FRIGIDA-like protein |
chr5:19609471-19611712 FORWARD LENGTH=558
Length = 558
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 97/167 (58%), Gaps = 11/167 (6%)
Query: 1 MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
++++ +EL M S Q +EL GLA+K+PG+++ L++ GK + AV F F
Sbjct: 318 IVADFKEDELLKLIPMVSRRRQAAELCRSLGLAEKMPGVIEVLVNSGKQIDAVNLAFAFE 377
Query: 61 LVDKFPPVPILKAHVNESEKLGRRLAHEGK------SVK-EITAREINALKSVIKVIENH 113
L ++F PV +LK+++ E+ RR + +G+ +V+ E RE+ LK+VIK IE H
Sbjct: 378 LTEQFSPVSLLKSYLIEA----RRSSPQGRPGNASPAVQDEFNERELIGLKTVIKCIEEH 433
Query: 114 NLESEFPTTSIEQRIEELKKLKTTPAFAAKPPQHQQQQSGIKRPRIS 160
+LE ++P + +RI +L+K K A +P + Q ++ +PR++
Sbjct: 434 SLEEQYPVEPLHKRILQLEKAKADKKRATEPMKPQPKRPRGAQPRVT 480
>AT4G14900.1 | Symbols: | FRIGIDA-like protein |
chr4:8521759-8523607 REVERSE LENGTH=532
Length = 532
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 17 ASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVN 76
++ Q+ +L + GL D++P ++++LI RG+ + AV + F LV FPPVP+LKA++
Sbjct: 282 SAWRKQMPKLAVSVGLGDQMPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLR 341
Query: 77 ESEKLGRRLAHE----GKSVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELK 132
+++K + + G+S + +E +AL++V+K IE + LE EFP ++++R+++L+
Sbjct: 342 DAKKATALITDDSNNSGRSAHLVARKEQSALRAVLKCIEEYKLEEEFPPENLKKRLDQLE 401
Query: 133 KLKTTPAFAAKPPQHQQQQSGIKRPRISAPVG 164
K KT A P +++ ++ P A G
Sbjct: 402 KTKTEKRKPAVIPANKRTRASYSGPMPPAKAG 433
>AT5G27230.1 | Symbols: | Frigida-like protein |
chr5:9584255-9587838 FORWARD LENGTH=948
Length = 948
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
Query: 25 ELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRR 84
+L GL D +PG +Q LI G + A+ YI+ F +V +F PV A +N+S ++ +
Sbjct: 688 DLCQFLGLDDAIPGFIQNLIKTGHRIKAIDYIYSFGMVHRFQPVS---AIINDSLRITKE 744
Query: 85 LAH------EGKSVKEITA--REINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLK 135
A + +S ++ A R++ AL++ IK I H LESEF +E++I+ L KL+
Sbjct: 745 SAEKSYREAKNESTTQVAAIDRQVRALRAAIKCISCHKLESEFQLGDLEEQIKSLLKLR 803
>AT5G27220.1 | Symbols: | Frigida-like protein | chr5:9578757-9582752
FORWARD LENGTH=1181
Length = 1181
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 31 GLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHV---NESEKLGRRLAH 87
GL+ +P LV+KL+D + +A+++IF F L F P+ +LK + S K RRL
Sbjct: 989 GLSYAMPNLVKKLLDERHYFMAIRFIFYFKLKFNFSPLELLKDEIITLRVSTKEKRRLDS 1048
Query: 88 EGKSVKEITAREINALKSVIKVIENHNLESEFPTTSI 124
+ + R+ LK +I++IE+ L+ + P I
Sbjct: 1049 QAED------RDAAKLKDIIELIEDFKLDIDLPVELI 1079