Miyakogusa Predicted Gene

Lj2g3v3234580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3234580.1 gene.g44464.t1.1
         (294 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55530.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   204   6e-53
AT5G55530.3 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   204   6e-53
AT5G55530.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   204   6e-53
AT1G50570.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   179   2e-45
AT1G50570.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   179   2e-45
AT5G12300.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    70   2e-12

>AT5G55530.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/303 (44%), Positives = 172/303 (56%), Gaps = 29/303 (9%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAGA 60
           M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLSL+Y G+
Sbjct: 123 MMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLSLSYYGS 181

Query: 61  SPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEYIGIPCE 117
            PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY GI C 
Sbjct: 182 YPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEYFGISCS 241

Query: 118 --ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXXXXXXXX 172
             +S+ SDSL T+ D EN  + +   ++++ S   S  +NG                   
Sbjct: 242 TIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATET----- 295

Query: 173 XXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPTMVQ 232
                   PN E +S    K+            ++G  + E   K V++V +EPE  +VQ
Sbjct: 296 --------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEPESKVVQ 343

Query: 233 QDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SRVFYGSR 291
           QDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SRVFYGSR
Sbjct: 344 QDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSRVFYGSR 402

Query: 292 AFF 294
            FF
Sbjct: 403 PFF 405


>AT5G55530.3 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/303 (44%), Positives = 172/303 (56%), Gaps = 29/303 (9%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAGA 60
           M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLSL+Y G+
Sbjct: 123 MMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLSLSYYGS 181

Query: 61  SPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEYIGIPCE 117
            PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY GI C 
Sbjct: 182 YPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEYFGISCS 241

Query: 118 --ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXXXXXXXX 172
             +S+ SDSL T+ D EN  + +   ++++ S   S  +NG                   
Sbjct: 242 TIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATET----- 295

Query: 173 XXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPTMVQ 232
                   PN E +S    K+            ++G  + E   K V++V +EPE  +VQ
Sbjct: 296 --------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEPESKVVQ 343

Query: 233 QDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SRVFYGSR 291
           QDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SRVFYGSR
Sbjct: 344 QDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSRVFYGSR 402

Query: 292 AFF 294
            FF
Sbjct: 403 PFF 405


>AT5G55530.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/303 (44%), Positives = 172/303 (56%), Gaps = 29/303 (9%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAGA 60
           M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLSL+Y G+
Sbjct: 123 MMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLSLSYYGS 181

Query: 61  SPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEYIGIPCE 117
            PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY GI C 
Sbjct: 182 YPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEYFGISCS 241

Query: 118 --ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXXXXXXXX 172
             +S+ SDSL T+ D EN  + +   ++++ S   S  +NG                   
Sbjct: 242 TIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATET----- 295

Query: 173 XXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPTMVQ 232
                   PN E +S    K+            ++G  + E   K V++V +EPE  +VQ
Sbjct: 296 --------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEPESKVVQ 343

Query: 233 QDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SRVFYGSR 291
           QDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SRVFYGSR
Sbjct: 344 QDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSRVFYGSR 402

Query: 292 AFF 294
            FF
Sbjct: 403 PFF 405


>AT1G50570.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:18726400-18727566 REVERSE
           LENGTH=388
          Length = 388

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 158/305 (51%), Gaps = 38/305 (12%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAGA 60
           M+SRVKNYLEDQLLGF+LVP                    TDL+H+PAGFV+LSL+YAG 
Sbjct: 111 MMSRVKNYLEDQLLGFSLVPLSEVIVRNGKLEKEFSLSS-TDLYHSPAGFVELSLSYAGD 169

Query: 61  SPDVMAISAMPSELDTNCTEKDSESLARDLDKIEFPDPKIANEDHMMVSEYIGIPCEES- 119
           SPDVM I A+P       T  ++E    + D+ EF DPKI  E++ MVS+Y    C +S 
Sbjct: 170 SPDVMHIPAVP-------TADETELAPIEFDESEFLDPKIVCENNQMVSKYFSTTCSDSD 222

Query: 120 ----------QCSDSLATTTDTENSEAGVQLVERFSACSVESNGVXXXXXXXXXXXXXXX 169
                     + +  L+   +T   EA         A SV +NG+               
Sbjct: 223 DFASSETGFVEVNSILSAVVETAVDEAA-------PANSVSTNGISSPSTAVSSGSSGTH 275

Query: 170 XXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPT 229
                       + EQ    + K   D+   G+ D ++     E+  KPV++VNIEPE  
Sbjct: 276 DVSKQSSEGNNSDSEQ----EAKKPTDIIKSGDLDKTD----EEAVVKPVLTVNIEPEQK 327

Query: 230 MVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSNSRVFYG 289
           +VQQDIVDMY KS+QQFTESLAKMKLP+D +           +Q      KS++SRVFYG
Sbjct: 328 VVQQDIVDMYTKSLQQFTESLAKMKLPLDIDSPTQSENSSSSQQTP----KSASSRVFYG 383

Query: 290 SRAFF 294
           SRAFF
Sbjct: 384 SRAFF 388


>AT1G50570.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:18726400-18727566 REVERSE
           LENGTH=388
          Length = 388

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 158/305 (51%), Gaps = 38/305 (12%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAGA 60
           M+SRVKNYLEDQLLGF+LVP                    TDL+H+PAGFV+LSL+YAG 
Sbjct: 111 MMSRVKNYLEDQLLGFSLVPLSEVIVRNGKLEKEFSLSS-TDLYHSPAGFVELSLSYAGD 169

Query: 61  SPDVMAISAMPSELDTNCTEKDSESLARDLDKIEFPDPKIANEDHMMVSEYIGIPCEES- 119
           SPDVM I A+P       T  ++E    + D+ EF DPKI  E++ MVS+Y    C +S 
Sbjct: 170 SPDVMHIPAVP-------TADETELAPIEFDESEFLDPKIVCENNQMVSKYFSTTCSDSD 222

Query: 120 ----------QCSDSLATTTDTENSEAGVQLVERFSACSVESNGVXXXXXXXXXXXXXXX 169
                     + +  L+   +T   EA         A SV +NG+               
Sbjct: 223 DFASSETGFVEVNSILSAVVETAVDEAA-------PANSVSTNGISSPSTAVSSGSSGTH 275

Query: 170 XXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPT 229
                       + EQ    + K   D+   G+ D ++     E+  KPV++VNIEPE  
Sbjct: 276 DVSKQSSEGNNSDSEQ----EAKKPTDIIKSGDLDKTD----EEAVVKPVLTVNIEPEQK 327

Query: 230 MVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSNSRVFYG 289
           +VQQDIVDMY KS+QQFTESLAKMKLP+D +           +Q      KS++SRVFYG
Sbjct: 328 VVQQDIVDMYTKSLQQFTESLAKMKLPLDIDSPTQSENSSSSQQTP----KSASSRVFYG 383

Query: 290 SRAFF 294
           SRAFF
Sbjct: 384 SRAFF 388


>AT5G12300.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:3978508-3979632 REVERSE
           LENGTH=374
          Length = 374

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 16/120 (13%)

Query: 1   MLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLSLAYAG- 59
           M+SR ++Y+EDQLLGFALVP                    TDLFH+PAG V+L+L+    
Sbjct: 96  MMSRARHYMEDQLLGFALVP--ISDIIGQDSVTQDYSLSSTDLFHSPAGTVKLTLSIVNP 153

Query: 60  -----ASPDV--MAISAMPSELDTNCTEKDSESLARDLDKIEFPDPKIANEDHMMVSEYI 112
                ++P +   +IS+    LD   +E        D  +IEFPD  +ANE+  MV+EY 
Sbjct: 154 SSTSSSNPKINTTSISSEVVLLDPQVSE------TVDYTRIEFPDINVANENKQMVTEYF 207



 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 229 TMVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQG---------- 278
           T +Q+ I +MYM+SMQQFTESLAKMKLPMD                              
Sbjct: 295 TTMQKQIAEMYMRSMQQFTESLAKMKLPMDLHNKPHEEDHSNNNNNTATQIQNQNNNANN 354

Query: 279 ----SKSSNSRVFYGSRAFF 294
                K   SRVFYGSRAFF
Sbjct: 355 NGMEKKKEGSRVFYGSRAFF 374