Miyakogusa Predicted Gene
- Lj2g3v3224500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3224500.1 CUFF.40158.1
(102 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55410.2 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 79 5e-16
AT5G55410.1 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 79 5e-16
AT5G55460.1 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 77 2e-15
AT5G55450.1 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 63 3e-11
AT5G48485.1 | Symbols: DIR1 | Bifunctional inhibitor/lipid-trans... 62 6e-11
AT5G48490.1 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 59 9e-10
AT3G52130.1 | Symbols: | Bifunctional inhibitor/lipid-transfer ... 48 1e-06
>AT5G55410.2 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:22460677-22461009 FORWARD LENGTH=110
Length = 110
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 1 MAQSSGKALVQWXXXXXXXXXXXXX---XXVALCNIDTSQLKSCRAAATGEHPPPPDKKC 57
M +++ K L+Q+ +++C++D + ++ CR A TG +PPPP C
Sbjct: 1 MGKNNTKFLMQFATFAMVLTFAMMVKEATSMSICDMDINDMQKCRPAITGNNPPPPVNDC 60
Query: 58 CDVVRQANLPCLCKYKSALPSFGINPTQALKLPSECGLSTPPE-CQ 102
C VVR+AN CLC++K LP I+P++ + L ++CG++T P CQ
Sbjct: 61 CVVVRKANFECLCRFKFYLPILRIDPSKVVALVAKCGVTTVPRSCQ 106
>AT5G55410.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:22460677-22461081 FORWARD LENGTH=107
Length = 107
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 1 MAQSSGKALVQWXXXXXXXXXXXXX---XXVALCNIDTSQLKSCRAAATGEHPPPPDKKC 57
M +++ K L+Q+ +++C++D + ++ CR A TG +PPPP C
Sbjct: 1 MGKNNTKFLMQFATFAMVLTFAMMVKEATSMSICDMDINDMQKCRPAITGNNPPPPVNDC 60
Query: 58 CDVVRQANLPCLCKYKSALPSFGINPTQALKLPSECGLSTPPE-CQ 102
C VVR+AN CLC++K LP I+P++ + L ++CG++T P CQ
Sbjct: 61 CVVVRKANFECLCRFKFYLPILRIDPSKVVALVAKCGVTTVPRSCQ 106
>AT5G55460.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:22468698-22469133 FORWARD LENGTH=109
Length = 109
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 28 VALCNIDTSQLKSCRAAATGEHPPPPDKKCCDVVRQANLPCLCKYKSALPSFGINPTQAL 87
+ CNI+ + L+ CR A G++PP P K+CC++++ ANL C+C++KS LP + P++
Sbjct: 30 ITACNINANHLEKCRPAVIGDNPPSPIKECCELLQAANLKCICRFKSVLPVLAVYPSKVQ 89
Query: 88 KLPSECGLST-PPECQ 102
L S+CGL+T PP CQ
Sbjct: 90 ALLSKCGLTTIPPACQ 105
>AT5G55450.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:22467560-22467874 FORWARD LENGTH=104
Length = 104
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 1 MAQSSGKALVQWXXXXXXXXXXXXX---XXVALCNIDTSQLKSCRAAATGEHPPPPDKKC 57
M + + + L+Q+ + +CNIDT+ L CR A TG +PPPP C
Sbjct: 1 MGKDNTRILMQFSALAMVLTAAIMVKEATSIPVCNIDTNDLAKCRPAVTGNNPPPPGPDC 60
Query: 58 CDVVRQANLPCLCKYKSALPSFGINPTQALKLPSECGLSTP 98
C V R ANL CLC YK LP+ GI+P++ L + CG+++P
Sbjct: 61 CAVARVANLQCLCPYKPYLPTVGIDPSRVRPLLANCGVNSP 101
>AT5G48485.1 | Symbols: DIR1 | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:19646317-19646625 REVERSE LENGTH=102
Length = 102
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 28 VALCNIDTSQLKSCRAAATGEHPPPPDKKCCDVVRQANLPCLCKYKSA--LPSFGINPTQ 85
+ LC + +L C+ A + E+P P + CC ++ A+ CLC YK++ L SFG++P
Sbjct: 27 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPEL 86
Query: 86 ALKLPSECGLSTPPEC 101
A LP +CGL+ P C
Sbjct: 87 ASALPKQCGLANAPTC 102
>AT5G48490.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr5:19647932-19648237 REVERSE LENGTH=101
Length = 101
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 28 VALCNIDTSQLKSCRAAATGEHPPPPDKKCCDVVRQANLPCLCKYKSA--LPSFGINPTQ 85
+ LC + ++L C A + +P P CC+ ++ A+ CLC YK++ L SFG++P
Sbjct: 26 IDLCGMTQAELNECLPAVSKNNPTSPSLLCCNALKHADYTCLCGYKNSPWLGSFGVDPKL 85
Query: 86 ALKLPSECGLSTPPEC 101
A LP EC L+ P C
Sbjct: 86 ASSLPKECDLTNAPTC 101
>AT3G52130.1 | Symbols: | Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein |
chr3:19332081-19332458 REVERSE LENGTH=125
Length = 125
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%)
Query: 37 QLKSCRAAATGEHPPPPDKKCCDVVRQANLPCLCKYKSALPSFGINPTQALKLPSECGLS 96
QL CRAA P PP + CC V PCLC + P GI+ + AL+LP C +
Sbjct: 58 QLIPCRAAVAPFSPIPPTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMALQLPQRCSAN 117
Query: 97 TPP 99
PP
Sbjct: 118 FPP 120