Miyakogusa Predicted Gene

Lj2g3v3224240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224240.1 Non Chatacterized Hit- tr|F1A2U8|F1A2U8_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,30.59,9e-18,SYNTAXIN 51,NULL; SYNTAXIN,NULL; Helical region found
in SNAREs,Target SNARE coiled-coil domain; seg,CUFF.40009.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16240.2 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ...   305   1e-83
AT1G16240.1 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ...   305   1e-83
AT1G79590.2 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 | ...   304   3e-83
AT1G79590.1 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 | ...   304   3e-83
AT1G16240.3 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ...   272   1e-73
AT1G16230.1 | Symbols:  | Target SNARE coiled-coil domain protei...   193   7e-50
AT1G16225.1 | Symbols:  | Target SNARE coiled-coil domain protei...   135   2e-32
AT1G28490.2 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants...    52   5e-07
AT1G28490.1 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants...    50   2e-06

>AT1G16240.2 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
           chr1:5555183-5556340 REVERSE LENGTH=232
          Length = 232

 Score =  305 bits (781), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 145/213 (68%), Positives = 183/213 (85%), Gaps = 3/213 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSW++ YNEA+KL+++I+ MISERSSS  +GP+AQR +SAIRRKITI G +LDSL
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPD- 119
           QSLL+++    +P+SEKE+NRRKDM+ +LRS+ N+MA+ L+M NF+NRDSL GP+IKPD 
Sbjct: 61  QSLLAEIHG--KPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDD 118

Query: 120 AMSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLD 179
           +MSR  G+DN+G++G QRQ+M+EQDEGLE+LE +V STKHIALAV+EELDL T LIDDLD
Sbjct: 119 SMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLD 178

Query: 180 QHVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
            HVDVTDSRLRRVQK+LAV+NK    GCSC+ M
Sbjct: 179 YHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211


>AT1G16240.1 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
           chr1:5555183-5556340 REVERSE LENGTH=232
          Length = 232

 Score =  305 bits (781), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 145/213 (68%), Positives = 183/213 (85%), Gaps = 3/213 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSW++ YNEA+KL+++I+ MISERSSS  +GP+AQR +SAIRRKITI G +LDSL
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPD- 119
           QSLL+++    +P+SEKE+NRRKDM+ +LRS+ N+MA+ L+M NF+NRDSL GP+IKPD 
Sbjct: 61  QSLLAEIHG--KPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDD 118

Query: 120 AMSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLD 179
           +MSR  G+DN+G++G QRQ+M+EQDEGLE+LE +V STKHIALAV+EELDL T LIDDLD
Sbjct: 119 SMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLD 178

Query: 180 QHVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
            HVDVTDSRLRRVQK+LAV+NK    GCSC+ M
Sbjct: 179 YHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211


>AT1G79590.2 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 |
           chr1:29947064-29948304 FORWARD LENGTH=233
          Length = 233

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 185/213 (86%), Gaps = 2/213 (0%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSD W++EYNEA+KL++DI+ M+SER++S  +GP+AQR +SAIRRKITILGTRLDSL
Sbjct: 1   MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPD- 119
           QSLL K+P GKQ VSEKE+NRRKDM+ +LRS+ N++AS L+M NF+NRDSLFG ++KPD 
Sbjct: 61  QSLLVKVP-GKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDD 119

Query: 120 AMSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLD 179
           A++R +G+DN+G++  QRQ+M+EQDEGLEKLEE+V STKHIALAVNEEL L T LIDDLD
Sbjct: 120 AINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLD 179

Query: 180 QHVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
             VD+TDSRLRRVQK+LA++NK    GCSC+ M
Sbjct: 180 YDVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212


>AT1G79590.1 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 |
           chr1:29947064-29948304 FORWARD LENGTH=233
          Length = 233

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 185/213 (86%), Gaps = 2/213 (0%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSD W++EYNEA+KL++DI+ M+SER++S  +GP+AQR +SAIRRKITILGTRLDSL
Sbjct: 1   MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPD- 119
           QSLL K+P GKQ VSEKE+NRRKDM+ +LRS+ N++AS L+M NF+NRDSLFG ++KPD 
Sbjct: 61  QSLLVKVP-GKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDD 119

Query: 120 AMSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLD 179
           A++R +G+DN+G++  QRQ+M+EQDEGLEKLEE+V STKHIALAVNEEL L T LIDDLD
Sbjct: 120 AINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLD 179

Query: 180 QHVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
             VD+TDSRLRRVQK+LA++NK    GCSC+ M
Sbjct: 180 YDVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212


>AT1G16240.3 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
           chr1:5555193-5556340 REVERSE LENGTH=228
          Length = 228

 Score =  272 bits (695), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 131/195 (67%), Positives = 168/195 (86%), Gaps = 3/195 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSW++ YNEA+KL+++I+ MISERSSS  +GP+AQR +SAIRRKITI G +LDSL
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPD- 119
           QSLL+++    +P+SEKE+NRRKDM+ +LRS+ N+MA+ L+M NF+NRDSL GP+IKPD 
Sbjct: 61  QSLLAEIHG--KPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDD 118

Query: 120 AMSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLD 179
           +MSR  G+DN+G++G QRQ+M+EQDEGLE+LE +V STKHIALAV+EELDL T LIDDLD
Sbjct: 119 SMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLD 178

Query: 180 QHVDVTDSRLRRVQK 194
            HVDVTDSRLR  ++
Sbjct: 179 YHVDVTDSRLRSAEE 193


>AT1G16230.1 | Symbols:  | Target SNARE coiled-coil domain protein |
           chr1:5553467-5554324 REVERSE LENGTH=193
          Length = 193

 Score =  193 bits (491), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 103/193 (53%), Positives = 136/193 (70%), Gaps = 3/193 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MAS  DSW++E NE +KL+++I  MI ERSS  E+   A RH+S++RRKITIL TR+ +L
Sbjct: 1   MASLCDSWIREQNETLKLSEEIDGMILERSSLAETSSYALRHASSMRRKITILATRVQTL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDA 120
           + LL++   GK  +S KE++RRK    +LRS+ N+MAS L M  FSN D L  PE K D 
Sbjct: 61  KYLLAE-SQGK-SISGKEMSRRKGTFENLRSKANQMASALDMLKFSNIDILLRPE-KDDI 117

Query: 121 MSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQ 180
           MSR  GLDN+G++GL RQ+MKE DE L+ LEE+V   KH AL +NE++ L T LID LD 
Sbjct: 118 MSRVIGLDNQGIVGLHRQVMKEHDEALDMLEETVMRVKHNALVMNEQIGLQTRLIDGLDH 177

Query: 181 HVDVTDSRLRRVQ 193
           HVDV+DS +R + 
Sbjct: 178 HVDVSDSGVRVIH 190


>AT1G16225.1 | Symbols:  | Target SNARE coiled-coil domain protein |
           chr1:5551041-5552028 REVERSE LENGTH=199
          Length = 199

 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 111/172 (64%), Gaps = 5/172 (2%)

Query: 25  MISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQSLLSKLPAGKQPVSEKELNRRKD 84
           MI ERSS  E+   A+ H+S +RRKITIL   + +L++LL++   GK  +S KE++R KD
Sbjct: 1   MILERSSLAETSSYARGHASYMRRKITILANGVQTLKNLLAE-SQGK-SISAKEMSRCKD 58

Query: 85  MLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMSRTNGLDNKGVIGLQRQIMKEQD 144
           M+  LRS+  +MAS L M  FSN  SL G +   D MSR   +DN+ ++G QR  MK QD
Sbjct: 59  MVEDLRSKAYQMASALDMLKFSNIGSLLGQD---DIMSRVIDMDNQEIVGFQRTTMKVQD 115

Query: 145 EGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQHVDVTDSRLRRVQKNL 196
           + LE LE+ V   K  ALA+N EL L T LID LD HVDV+ S +  +Q+++
Sbjct: 116 KALEMLEKGVMHLKREALAMNMELGLQTRLIDRLDHHVDVSASDVEELQRSI 167


>AT1G28490.2 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61
           | chr1:10016634-10017842 FORWARD LENGTH=206
          Length = 206

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 29/192 (15%)

Query: 47  RRKITIL-----GTRLDSLQSLLSKLPAGKQP----VSEKELNRRKDMLASLRSRVNEMA 97
           RR + +L     G ++D L+  ++   A K P    + E EL +R+   ++ R++V  + 
Sbjct: 3   RRSLLLLVEALSGRKVDELEKAIT--VAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVK 60

Query: 98  STLSMPNFSNRDSLFGPEIKPDAMSRTN-----------GLDNKGVI----GLQRQIMKE 142
           S +     S+  +    E++ + M   N           G D+ G +      Q  ++K+
Sbjct: 61  SGVLAGKVSS-GAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQ 119

Query: 143 QDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQHVDVTDSRLRRVQKNLAVLNKR 202
           QDE L++L +SV     + L +++EL     +ID+LD  +D T +RL  VQK + ++ K+
Sbjct: 120 QDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKK 179

Query: 203 TN--GGCSCLCM 212
               G    +C 
Sbjct: 180 AGAKGQMMMICF 191


>AT1G28490.1 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61
           | chr1:10016433-10017842 FORWARD LENGTH=245
          Length = 245

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 22/165 (13%)

Query: 69  AGKQP----VSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMSRT 124
           A K P    + E EL +R+   ++ R++V  + S +     S+  +    E++ + M   
Sbjct: 67  AAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSS-GAGHASEVRRELMRMP 125

Query: 125 N-----------GLDNKGVI----GLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELD 169
           N           G D+ G +      Q  ++K+QDE L++L +SV     + L +++EL 
Sbjct: 126 NSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELV 185

Query: 170 LHTSLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTN--GGCSCLCM 212
               +ID+LD  +D T +RL  VQK + ++ K+    G    +C 
Sbjct: 186 AQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICF 230