Miyakogusa Predicted Gene

Lj2g3v3224070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224070.1 tr|G7K498|G7K498_MEDTR Bactericidal
permeability-increasing protein OS=Medicago truncatula
GN=MTR_5g,74.58,9e-17,seg,NULL,
NODE_61630_length_204_cov_270.676483.path1.1
         (82 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04970.1 | Symbols:  | lipid-binding serum glycoprotein famil...    64   2e-11
AT3G20270.2 | Symbols:  | lipid-binding serum glycoprotein famil...    62   1e-10
AT3G20270.3 | Symbols:  | lipid-binding serum glycoprotein famil...    62   1e-10
AT3G20270.1 | Symbols:  | lipid-binding serum glycoprotein famil...    62   1e-10

>AT1G04970.1 | Symbols:  | lipid-binding serum glycoprotein family
          protein | chr1:1411216-1413431 FORWARD LENGTH=488
          Length = 488

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 46/62 (74%)

Query: 21 QHNEDEGFISVVISDKGLDFAKDFVIDKAVASIVQSQLPEIEKTVKVPLVGKANVILSDI 80
          Q    + F SV++S  GLDF K+ +++KA+ASI+  Q+P IEK++K+P +G  +V++S++
Sbjct: 21 QTQSTDSFTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKSMKIPFLGGIDVVVSNL 80

Query: 81 TI 82
          TI
Sbjct: 81 TI 82


>AT3G20270.2 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7068879-7070866 FORWARD LENGTH=515
          Length = 515

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 45/63 (71%)

Query: 20  VQHNEDEGFISVVISDKGLDFAKDFVIDKAVASIVQSQLPEIEKTVKVPLVGKANVILSD 79
           +  + + G IS+++S+ GL+FAKD++I K + + +  QLP+IE  VK+PL+GK  + LS+
Sbjct: 58  LAQSNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQLPDIENKVKIPLIGKVRMGLSN 117

Query: 80  ITI 82
           I I
Sbjct: 118 IQI 120


>AT3G20270.3 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7067779-7070866 FORWARD LENGTH=722
          Length = 722

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 45/63 (71%)

Query: 20  VQHNEDEGFISVVISDKGLDFAKDFVIDKAVASIVQSQLPEIEKTVKVPLVGKANVILSD 79
           +  + + G IS+++S+ GL+FAKD++I K + + +  QLP+IE  VK+PL+GK  + LS+
Sbjct: 265 LAQSNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQLPDIENKVKIPLIGKVRMGLSN 324

Query: 80  ITI 82
           I I
Sbjct: 325 IQI 327


>AT3G20270.1 | Symbols:  | lipid-binding serum glycoprotein family
           protein | chr3:7067779-7070866 FORWARD LENGTH=722
          Length = 722

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 45/63 (71%)

Query: 20  VQHNEDEGFISVVISDKGLDFAKDFVIDKAVASIVQSQLPEIEKTVKVPLVGKANVILSD 79
           +  + + G IS+++S+ GL+FAKD++I K + + +  QLP+IE  VK+PL+GK  + LS+
Sbjct: 265 LAQSNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQLPDIENKVKIPLIGKVRMGLSN 324

Query: 80  ITI 82
           I I
Sbjct: 325 IQI 327