Miyakogusa Predicted Gene
- Lj2g3v3220810.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3220810.2 Non Chatacterized Hit- tr|A5AEZ1|A5AEZ1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.98,2e-18,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.39885.2
(233 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 140 1e-33
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 91 5e-19
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 85 5e-17
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 81 5e-16
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 80 9e-16
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 80 9e-16
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 76 2e-14
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 75 3e-14
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 73 1e-13
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 69 4e-12
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 67 7e-12
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 66 2e-11
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 64 1e-10
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 61 5e-10
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 59 2e-09
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 57 1e-08
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 52 3e-07
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 52 3e-07
AT4G14605.1 | Symbols: | Mitochondrial transcription terminatio... 49 2e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 132/235 (56%), Gaps = 7/235 (2%)
Query: 3 SLQNQIIPTFEFVRRFCPSHEKAMACVVTGSSCI---NIALMKSKVKLLLDMGVPPSNIY 59
SL NQ+IP++ F++ S EK +A + + + + + + + GVP I
Sbjct: 168 SLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIK 227
Query: 60 LLLITRPS--MLKCAHLKEAVEEVKGLGFNPSKTLFVAALQAKCSI-SKSLWDAKVDAFK 116
LLL P M K + ++ + +GFNP K+ FV A+ A +KS+WD + ++
Sbjct: 228 LLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQ 287
Query: 117 TWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYSLEKRL 176
WGWSED I+ AF++ PH M+ S K+N M ++V + P + P + +SLEKR+
Sbjct: 288 RWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRI 347
Query: 177 MPRASVVQYLLSRGLMKKDASLSRPFFYSDKLFLQKYVNCFEEEETSKLLSLYHG 231
+PR SV + L+S GL+K+D SL+ +K+FL+K V + EEE +L++LY G
Sbjct: 348 IPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKY-EEELPELMNLYLG 401
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 3 SLQNQIIPTFEFVRRFCPSHEKAMACVVTGSSCINIALMKS---KVKLLLDMGVPPSNIY 59
SL ++IP ++ ++ E + C+ G C ++ + +V + ++GVP +I
Sbjct: 155 SLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIK 214
Query: 60 LLLITRPSML--KCAHLKEAVEEVKGLGFNPSKTLFVAALQAKCSISKSLWDAKVDAFKT 117
L+ P + E + V GF+P K FV A+ A S+S + K F+
Sbjct: 215 WLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQC 274
Query: 118 WGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYSLEKRLM 177
+GWS++ + A R P+ + S K+ + + V ++G + A P + S+EKR+
Sbjct: 275 FGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIK 334
Query: 178 PRASVVQYLLSRGLMKKD 195
PR V+ LLS+GL+KK+
Sbjct: 335 PRNQVISLLLSKGLVKKE 352
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 38/223 (17%)
Query: 47 LLLDMGVPPSNIYLLLIT-RPSMLKCAHLKEAVEEVKGLGFNPSKTLFVAALQAKCSISK 105
+L ++G+P ++ LLI+ + +E++++V +GF+PS + FV AL +S
Sbjct: 195 VLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSD 254
Query: 106 SLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKV-NAVMSFW-------------- 150
+ KV+A+K G+ + + F+R P+ + +S K+ N + +F
Sbjct: 255 KNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIK 314
Query: 151 --------------------VGHLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRG 190
V + W L + P + GYSLEKR +PR +VVQ L+S+G
Sbjct: 315 RFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKG 374
Query: 191 LMKKD-ASLSRPFFYSDKLFLQKYVNCFEEEE-TSKLLSLYHG 231
L+ + S+SR F +D++FL +YV E+++ ++L+++Y
Sbjct: 375 LIGSELPSISRVFVCTDQVFLNRYVKRHEDKQLETELMAIYRA 417
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 2 VSLQNQIIPTFEFVRRF-CPSHEKAMACVVTGSSCINIALMKS-------KVKLLLDMGV 53
VSL ++IPT E ++ P HE V S C + L + + L G+
Sbjct: 137 VSLVKKLIPTVEILKSIVAPKHED---LPVILSRCGWLLLSRDPNLFLLPNISYLETCGI 193
Query: 54 PPSNIYLLLITRPSMLKCAH--LKEAVEEVKGLGFNPSKTLFVAALQAKCSISKSLWDAK 111
S + LL +P + + L+ V LGF + + V A+ + S+S+ +D K
Sbjct: 194 VGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRK 253
Query: 112 VDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYS 171
V F G+SED I D RR P ++ S K+ F++ +G + L P + Y+
Sbjct: 254 VKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYN 313
Query: 172 LEKRLMPRASVVQYLLSRGLMKKDASLSRPFF----YSDKLFLQKYVNCFEEEETSKLLS 227
LEKR++PR V+Q L +GL+ K+ + +++ FL+KYV F +E +LL
Sbjct: 314 LEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLV 373
Query: 228 LYHGGC 233
Y C
Sbjct: 374 AYKCVC 379
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 40/226 (17%)
Query: 45 VKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQAKCS 102
V +L ++G+P ++ LLI+ S C K E +++V +GF+P+ + FV ALQ
Sbjct: 193 VSVLRELGMPHKLLFSLLIS-DSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYK 251
Query: 103 ISKSLWDAKVDAFKTWGW------------------SEDTILDA--------FRRD---- 132
+++ + KV +K+ G+ SE +LD+ F RD
Sbjct: 252 MNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAK 311
Query: 133 -----PHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYLL 187
P + S V F V + W + + P +FGYSLEKR++PR +V++ L+
Sbjct: 312 MVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALM 371
Query: 188 SRGLMKKD-ASLSRPFFYSDKLFLQKYV-NCFEEEETSKLLSLYHG 231
S+GLM+ + S+S + ++FL +YV N +++ ++L+++Y
Sbjct: 372 SKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRA 417
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 40/226 (17%)
Query: 45 VKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQAKCS 102
V +L ++G+P ++ LLI+ S C K E +++V +GF+P+ + FV ALQ
Sbjct: 193 VSVLRELGMPHKLLFSLLIS-DSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYK 251
Query: 103 ISKSLWDAKVDAFKTWGW------------------SEDTILDA--------FRRD---- 132
+++ + KV +K+ G+ SE +LD+ F RD
Sbjct: 252 MNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAK 311
Query: 133 -----PHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYLL 187
P + S V F V + W + + P +FGYSLEKR++PR +V++ L+
Sbjct: 312 MVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALM 371
Query: 188 SRGLMKKD-ASLSRPFFYSDKLFLQKYV-NCFEEEETSKLLSLYHG 231
S+GLM+ + S+S + ++FL +YV N +++ ++L+++Y
Sbjct: 372 SKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRA 417
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 55/254 (21%)
Query: 22 HEKAMACVVTGSSCINIALMKSKVKLLLDMGVPPSNIYLLLITRPSMLKC------AHLK 75
+EK + G+ NI +++ ++GVP + LLLI++ S C A LK
Sbjct: 161 YEKISHSLAQGNKIRNILVLR-------ELGVPQKRLLLLLISK-SQPVCGKEKFDASLK 212
Query: 76 EAVEEVKGLGFNPSKTLFVAALQAKCSISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHI 135
+ VE +GF+P+ + FV AL +S + K+ +++ G+S D + F++ P
Sbjct: 213 KVVE----MGFDPTTSTFVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRS 268
Query: 136 MLNSIGKV-NAVMSFW----------------------------------VGHLGWDPSV 160
+ +S KV N++ +F V + W
Sbjct: 269 LTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKA 328
Query: 161 LQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLSRPFFYSDKLFLQKYVNCFEE 219
+ ++P + GYSLEKR +PR +V++ L+S+GL++ + +S + + FL YV+ ++
Sbjct: 329 VASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYVSKHDD 388
Query: 220 EE-TSKLLSLYHGG 232
++ ++L++++ G
Sbjct: 389 KQLVAELMAIFTGN 402
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 55/217 (25%)
Query: 45 VKLLLDMGVPPSNIYLLLITRPSMLKC------AHLKEAVEEVKGLGFNPSKTLFVAALQ 98
V L ++G+P S + L L+ S C A LK+ VE +GF+P+ T FV AL+
Sbjct: 186 VSALRELGMP-SRLLLPLLVSKSQPVCGKENFDASLKKVVE----MGFDPTTTKFVLALR 240
Query: 99 AKCSISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIM---------------------- 136
+S+ + KV F++ G++ D + + F++ P ++
Sbjct: 241 MLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRA 300
Query: 137 ----------------LNSIGKVNAVMSFWVGHLGWDPSVLQAVPTLFGYSLEKRLMPRA 180
+ S+ K N F V + W + L P +FGYS+EKR++PR
Sbjct: 301 EFLMMVKRYPPCIEYSVESVKKKN---EFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRC 357
Query: 181 SVVQYLLSRGLMKKDASL---SRPFFYSDKLFLQKYV 214
++++ LLS+GL++K + L S +D+ FL +YV
Sbjct: 358 NILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 40/224 (17%)
Query: 47 LLLDMGVPPSNIYLLLITRPSMLKCAH--LKEAVEEVKGLGFNPSKTLFVAALQAKCSIS 104
+L +MGVP ++ LLI+ + C KE++++ +GF+P+ FV AL +S
Sbjct: 201 VLREMGVPQRLLFSLLISDAGDV-CGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGLS 259
Query: 105 KSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKV-NAVMSFW------------- 150
+ K +A K G + D + F++ P+I+ S K+ N+V +F
Sbjct: 260 DKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMV 319
Query: 151 ---------------------VGHLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYLLSR 189
V + W + ++P + GYSLEKR +PR +V++ L+S+
Sbjct: 320 KRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISK 379
Query: 190 GLMKKD-ASLSRPFFYSDKLFLQKYVNCFEEEE-TSKLLSLYHG 231
GL++ + +S + ++FL YV ++++ ++L++++ G
Sbjct: 380 GLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTG 423
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 41 MKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQ 98
++ KV + +G ++++ + PS L + K E +K G + L +
Sbjct: 258 IEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKH 317
Query: 99 AKC--SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGW 156
KC S + + ++ ++ F G+S D +R P + + V F V ++ W
Sbjct: 318 PKCICSSEQKIVNS-IETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNW 376
Query: 157 DPSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKKDASLSRP----FFYSDKLFLQK 212
L ++P +FGYSLEKR +PR +V++ L+S+GLM KD S + P +D+ FL++
Sbjct: 377 PLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLM-KDGSEAPPMSSVLTSTDQAFLRR 435
Query: 213 YV 214
YV
Sbjct: 436 YV 437
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 124/287 (43%), Gaps = 89/287 (31%)
Query: 19 CPSHEKAMACVVTGSSCINIALMKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--E 76
CP +K G+ NI++++ ++GVP ++ LLI+R + C K E
Sbjct: 177 CPEGKK-------GNRIRNISVLR-------ELGVPQKLLFSLLISRYQPV-CGKEKFEE 221
Query: 77 AVEEVKGLGFNPSKTLFVAALQAKCSISKSLWDAKVDA--------------FKTW---- 118
++++V +GF+P+K+ FV AL +S+ + KV+ FK W
Sbjct: 222 SLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFL 281
Query: 119 -----------------GWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVG--------- 152
G E+ I+ + P + +S K+ + ++G
Sbjct: 282 KFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFK 341
Query: 153 --------------------------HLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYL 186
+ W + +PT+ GYSLEKR++PR++V++ L
Sbjct: 342 MMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKAL 401
Query: 187 LSRGLM-KKDASLSRPFFYSDKLFLQKYVNCFEEEETSKLLSLYHGG 232
+S+GL+ ++ +S +D+ FL++YV ++ KL+++++ G
Sbjct: 402 MSKGLIGSENPPISSVLVCTDQEFLKRYV-MKHDKLVPKLMAIFNRG 447
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 41 MKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQ 98
++ +V + G +++ + P L + K + +E +K G + + V
Sbjct: 259 IEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKY 318
Query: 99 AKC-SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWD 157
+C S+ ++ F G+S D + +R P ++ S V + F V + W
Sbjct: 319 PQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMNWP 378
Query: 158 PSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKKDAS----LSRPFFYSDKLFLQKY 213
+ + PT+ GY+LEKR +PR +V++ L+S+ L+ S +S +D+LFL++Y
Sbjct: 379 LKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDELFLKRY 438
Query: 214 V-NCFEEEETSKLLSLYHGG 232
V N ++E +L+++Y G
Sbjct: 439 VRNHGDKELVLELMTIYTRG 458
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Query: 45 VKLLLDMGVPPSNIYLLLITRPSMLKCA--HLKEAVEEVKGLGFNPSKTLFVAALQAKCS 102
V +L D+GVP ++ LLI+ + C + +E++++V +GF+P+ + FV AL+A
Sbjct: 195 VSVLRDLGVPQKLLFSLLISDAQPV-CGKENFEESLKKVVEMGFDPTTSKFVQALRAVYR 253
Query: 103 ISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFW--VGHLGWDP-S 159
+ + +V+ +K +G++ + + F++ P+ + +S K+ + G L + S
Sbjct: 254 FTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVIS 313
Query: 160 VLQAVPTLFGYSLEKRL 176
VL+ P G S +K L
Sbjct: 314 VLKKYPQCIGTSEQKIL 330
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 74/259 (28%)
Query: 45 VKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQAKCS 102
V +L D+GVP ++ LL + + C K E++ +V G+GF+P+ FV AL
Sbjct: 201 VLVLRDLGVPQRLLFSLLFSNHHVC-CGKEKFEESLNKVVGMGFDPTTPKFVEALCIVYG 259
Query: 103 ISKSLWDAKVDAFKTWGWS-----------------------------------EDTILD 127
+S + + +K +G + ED +L
Sbjct: 260 LSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVLS 319
Query: 128 AFRRDP-------HIMLNSIGK----------------------------VNAVMSFWVG 152
F+++P +LNS+ V F V
Sbjct: 320 VFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVK 379
Query: 153 HLGWDPSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLSRPFFYSDKLFLQ 211
+ W V+ P + GYS+EKR +PR +V++ L+S+GL+ + ++ +D+ FL+
Sbjct: 380 KMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTFLK 439
Query: 212 KYVNCFEEEETSKLLSLYH 230
+YV +E+ +L+S+++
Sbjct: 440 RYVVEHDEKLVLELMSIFN 458
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 41 MKSKVKLLLDMGVPPSNIYLLLITRPSMLKCA--HLKEAVEEVKGLGFNPSKTLFVAALQ 98
++ KV + +G+ + ++ + P LK + ++ + E +K +G + V
Sbjct: 255 IEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVCLVVKKY 314
Query: 99 AKC-SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWD 157
+C S+ V F G+++D +L +R P + + V F V +GW
Sbjct: 315 PECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWP 374
Query: 158 PSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKK----DASLSRPFFYSDKLFLQKY 213
V+ + P + G+SLEK ++PR +V++ L+S GL+ + + L+ P KLF++K+
Sbjct: 375 LKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKH 434
Query: 214 VNCFEE 219
+ E
Sbjct: 435 QDVLPE 440
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 41 MKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK--EAVEEVKGLGFNPSKTLFVAALQ 98
+++KV + +G +++ + PS L + K + E +K G L V
Sbjct: 262 IEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKF 321
Query: 99 AKC-SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWD 157
+C + S+ ++ F G+S D + +R P ++ S V F V + W
Sbjct: 322 PQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWP 381
Query: 158 PSVLQAVPTLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLSRPFFYSDKLFLQKYVNC 216
+ + P + GYSLEKR +PR +V++ L+S+G + + +S +++ FL +YV
Sbjct: 382 LKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRYVKN 441
Query: 217 FEEEE-TSKLLSLYHG 231
++++ +L++++ G
Sbjct: 442 HDDKKIVPELMAIFTG 457
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 51 MGVPPSNIYLLLITRPSMLKCAHLK-EAVEEVKGLGFNPSKTLF--VAALQAKCSISK-S 106
+G ++ +LI+RP+++ + E E ++ G +F VA + +S+
Sbjct: 195 LGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVI---IGVSRME 251
Query: 107 LWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSIGKVNAVMSFWVGHLGWDPSVLQAVPT 166
+ KV + +G+SE+ I + + P ++ S+ KV M+F + + + P
Sbjct: 252 TIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPC 311
Query: 167 LFGYSLEKRLMPRASVVQYLLSRGL--MKKDASLSRPFFYSDKLFLQKYVNCFEEEETSK 224
L +LE RL PRA +V+ +L L + K+ S+ R S+K FL+ YV C ++ ++
Sbjct: 312 LLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDIATE 371
Query: 225 LLSLYH 230
L+ Y
Sbjct: 372 LMEFYE 377
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 18 FCPSHEKAMACVVTGSSCINIALMKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK-- 75
F P A V T S+ ++ +V + +G +++ + P+ L + K
Sbjct: 164 FAPKIFDATVVVCTLSN----ETLEERVNIYKTLGFDVRDVWEMFKKCPTFLNISEKKIT 219
Query: 76 EAVEEVKGLGFNPSKTLFVAALQAKC-SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPH 134
++ E +K G + + + +C S+ + K G E+ +L F+R P
Sbjct: 220 QSFETLKKCGLVEEEVISMFQKSPQCIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQ 279
Query: 135 IMLNSIGKV-NAVMSFWVGHLGWDPSVLQ-------AVPTLFGYSLEKRLMPRASVVQYL 186
+ S K+ NAV +F D ++ ++P + +S+EK ++PR +V++ L
Sbjct: 280 CIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKAL 339
Query: 187 LSRGLMKKD-ASLSRPFFYSDKLFLQKYVNCFEEEE-TSKLLSLY 229
S+ L+K + +S+ D++FL++YV+ +++E +L+S++
Sbjct: 340 TSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDDQELVDELMSIF 384
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 18 FCPSHEKAMACVVTGSSCINIALMKSKVKLLLDMGVPPSNIYLLLITRPSMLKCAHLK-- 75
F P A V T S+ ++ +V + +G +++ + P+ L + K
Sbjct: 175 FAPKIFDATVVVCTLSN----ETLEERVNIYKTLGFDVRDVWEMFKKCPTFLNISEKKIT 230
Query: 76 EAVEEVKGLGFNPSKTLFVAALQAKC-SISKSLWDAKVDAFKTWGWSEDTILDAFRRDPH 134
++ E +K G + + + +C S+ + K G E+ +L F+R P
Sbjct: 231 QSFETLKKCGLVEEEVISMFQKSPQCIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQ 290
Query: 135 IMLNSIGKV-NAVMSFWVGHLGWDPSVLQ-------AVPTLFGYSLEKRLMPRASVVQYL 186
+ S K+ NAV +F D ++ ++P + +S+EK ++PR +V++ L
Sbjct: 291 CIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKAL 350
Query: 187 LSRGLMKKD-ASLSRPFFYSDKLFLQKYVNCFEEEE-TSKLLSLY 229
S+ L+K + +S+ D++FL++YV+ +++E +L+S++
Sbjct: 351 TSKRLLKTEVSSMFSVLICPDEVFLERYVSKHDDQELVDELMSIF 395
>AT4G14605.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:8378815-8380564 FORWARD
LENGTH=493
Length = 493
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 41 MKSKVKLLLDMGVPPSNIYLLLITRPSMLKCA---HLKEAVEEVKGLGFNPSK-TLFVAA 96
+K V+ LLD+G+P S+I +L RP + + +LK + ++ LG + ++ ++
Sbjct: 232 IKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISR 291
Query: 97 LQAKCSISKSLWDAKVDAFKTWGWSEDTILDAFRRDPHIMLNSI-GKVNAVMSFWVGHLG 155
A + S+ + V+ G +E+ I R P+IM S+ K+ M ++ L
Sbjct: 292 FPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRS-LN 350
Query: 156 WDPSV-LQAVPTLFGYSLEKRLMPRASVVQYLLSRGL 191
D +V L P FG S+E L P V ++ L +G
Sbjct: 351 VDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEKGF 384