Miyakogusa Predicted Gene

Lj2g3v3210780.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3210780.2 Non Chatacterized Hit- tr|D8QUI7|D8QUI7_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.67,4e-18,coiled-coil,NULL; Trigger_C,Trigger factor,
C-terminal, bacterial,CUFF.39890.2
         (109 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55220.1 | Symbols:  | trigger factor type chaperone family p...   171   1e-43

>AT5G55220.1 | Symbols:  | trigger factor type chaperone family
           protein | chr5:22397677-22400678 FORWARD LENGTH=547
          Length = 547

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 98/109 (89%)

Query: 1   MQAKYKLNEQQLASLSSPKAVNEYLEHQRENITNLIKQNLAVGDIYRRENLQLATEDLVK 60
           +Q   KLNE QLASLSS KAVNE+LE QRE+ITN+IKQN+AVGDI++RENL+ +T++LVK
Sbjct: 439 IQGNMKLNEDQLASLSSQKAVNEFLETQRESITNIIKQNIAVGDIFKRENLEFSTDELVK 498

Query: 61  EVENSIAEFKRQNQEYDEERVKGQVQEILEGAKVLEWLREHAEVQYITR 109
           EVENSI+EFK+  QE+DEERVK QVQEILEGAKVLEWL++ AE+QYITR
Sbjct: 499 EVENSISEFKKHKQEFDEERVKDQVQEILEGAKVLEWLKDRAEIQYITR 547