Miyakogusa Predicted Gene

Lj2g3v3188480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3188480.1 Non Chatacterized Hit- tr|I1JJC4|I1JJC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.946
PE=3,84.48,0,asp_carb_tr: aspartate carbamoyltransferase,Aspartate
carbamoyltransferase; SUBFAMILY NOT NAMED,NULL,CUFF.39859.1
         (382 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20330.1 | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-709190...   532   e-151
AT1G75330.1 | Symbols: OTC | ornithine carbamoyltransferase | ch...    86   3e-17

>AT3G20330.1 | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904
           REVERSE LENGTH=390
          Length = 390

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/311 (82%), Positives = 291/311 (93%)

Query: 72  QKFQLDDVIEAQQFDRDTLSAIFEIAKSMESIKHNSSGSQMLKGYLMATLFYEPSTRTRL 131
           +KF+L DVIE +QFDR+ LSAIF++A+ ME I+ +SS S++LKGYLMATLFYEPSTRTRL
Sbjct: 80  KKFELSDVIEGKQFDREMLSAIFDVAREMEKIEKSSSQSEILKGYLMATLFYEPSTRTRL 139

Query: 132 SFESAMKRLGGDVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKRAAA 191
           SFESAMKRLGG+VLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAA++AAA
Sbjct: 140 SFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARKAAA 199

Query: 192 TANIPVINAGDGPGQHPSQALLDVYTIEREIGKLDGIRVGLVGDLANGRTVRSLAYLLAK 251
           TANIPVINAGDGPG+HP+QALLDVYTI+ EIGKLDGI V LVGDLANGRTVRSLAYLLAK
Sbjct: 200 TANIPVINAGDGPGEHPTQALLDVYTIQSEIGKLDGISVALVGDLANGRTVRSLAYLLAK 259

Query: 252 YQDVKLYFVSPNVVKMKDDIKEYLTSKGVEWEESADLMEVASKCDVVYQTRIQKERFEGK 311
           ++DVK+YFVSP +VKMKDDIK+YLTS GVEWEES+DLMEVASKCDVVYQTRIQ+ERF  +
Sbjct: 260 FKDVKIYFVSPEIVKMKDDIKDYLTSSGVEWEESSDLMEVASKCDVVYQTRIQRERFGER 319

Query: 312 IDLYEQARGKYIVNQDVLNVMQKHAVVMHPLPRLDEIEVNVDDDPRAAYFRQAKNGLYIR 371
           +DLYE ARGKYIV++D+L VMQK A++MHPLPRLDEI  +VD DPRAAYFRQAKNGL+IR
Sbjct: 320 LDLYEAARGKYIVDKDLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIR 379

Query: 372 MALLKVLLLGW 382
           MALLK+LL+GW
Sbjct: 380 MALLKLLLVGW 390


>AT1G75330.1 | Symbols: OTC | ornithine carbamoyltransferase |
           chr1:28266457-28268383 REVERSE LENGTH=375
          Length = 375

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 23/320 (7%)

Query: 73  KFQLDDVIEAQQFDRDTLSAIFEIAKSMESI-KHNSSGSQMLKGYLMATLFYEPSTRTRL 131
           K  L D +    FD  T+  I + A  ++++ K         KG  M+ +F +PS RTR+
Sbjct: 69  KSDLKDFLAIDDFDTATIKTILDKASEVKALLKSGERNYLPFKGKSMSMIFAKPSMRTRV 128

Query: 132 SFESAMKRLGGDVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKRAAA 191
           SFE+    LGG  L      +     + ET  D  R +  Y+DII+ R F        A 
Sbjct: 129 SFETGFFLLGGHALYL-GPNDIQMGKREET-RDVARVLSRYNDIIMARVFAHQDILDLAN 186

Query: 192 TANIPVINAGDGPGQHPSQALLDVYTIEREIGKLDGIRVGLVGDLANGRTVRSLAYLLAK 251
            +++PV+N G     HP Q + D  T+   IG+++G +V  VGD  N   V S   L + 
Sbjct: 187 YSSVPVVN-GLTDHNHPCQIMADALTMIEHIGQVEGTKVVYVGDGNN--MVHSWLELASV 243

Query: 252 YQDVKLYFVSPNVVKMKDDIKEYLTSKGV---EWEESADLMEVASKCDVVYQ----TRIQ 304
              +  +FV       + D +    +K     + E + D  E     DVVY     +  Q
Sbjct: 244 ---IPFHFVCACPKGYEPDKERVSKAKQAGLSKIEITNDPKEAVIGADVVYSDVWASMGQ 300

Query: 305 KERFEGKIDLYEQARGKYIVNQDVLNVMQKHAVVMHPLPRLDEIEVN--VDDDPRAAYFR 362
           K+  E +     +A   + V++ ++ +  + A  MH LP    +EV   V + P +  F 
Sbjct: 301 KDEAEAR----RKAFQGFQVDEALMKLAGQKAYFMHCLPAERGVEVTNGVVEAPYSIVFP 356

Query: 363 QAKNGLYIRMALLKVLLLGW 382
           QA+N ++ + A++ + LLG+
Sbjct: 357 QAENRMHAQNAIM-LHLLGF 375