Miyakogusa Predicted Gene
- Lj2g3v3184290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3184290.1 Non Chatacterized Hit- tr|I1M6R0|I1M6R0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.65,2e-19,DUF313,Protein of unknown function DUF313; no
description,DNA-binding pseudobarrel domain; DNA-bindi,CUFF.39838.1
(148 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24850.1 | Symbols: | Domain of unknown function (DUF313) |... 77 4e-15
AT1G05920.1 | Symbols: | Domain of unknown function (DUF313) |... 76 1e-14
AT2G32645.1 | Symbols: | Domain of unknown function (DUF313) |... 75 2e-14
AT5G24050.1 | Symbols: | Domain of unknown function (DUF313) |... 74 4e-14
AT2G31720.1 | Symbols: | Domain of unknown function (DUF313) |... 72 2e-13
AT2G27410.1 | Symbols: | Domain of unknown function (DUF313) |... 71 2e-13
AT5G38490.1 | Symbols: | Domain of unknown function (DUF313) |... 67 4e-12
AT2G24670.1 | Symbols: | Domain of unknown function (DUF313) |... 64 3e-11
AT1G32030.1 | Symbols: | Domain of unknown function (DUF313) |... 64 5e-11
AT1G05930.1 | Symbols: | Domain of unknown function (DUF313) |... 62 2e-10
AT5G38500.1 | Symbols: | Domain of unknown function (DUF313) |... 60 5e-10
AT3G49610.1 | Symbols: | Domain of unknown function (DUF313) |... 58 2e-09
AT2G31420.1 | Symbols: | Domain of unknown function (DUF313) |... 55 2e-08
AT2G18810.1 | Symbols: | Domain of unknown function (DUF313) |... 55 2e-08
AT1G05615.1 | Symbols: | Domain of unknown function (DUF313) |... 48 3e-06
>AT3G24850.1 | Symbols: | Domain of unknown function (DUF313) |
chr3:9071105-9072184 FORWARD LENGTH=359
Length = 359
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 9 DQPVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVT 68
D P ++V ++E + KL+ +K L +D+N NR S+P +L DFLT E
Sbjct: 208 DTPKWLVKVMRDMKE--AKDAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESR 265
Query: 69 LLNGR-EGGKPAGLTVNVLDPSLELWEGLRLKKWEMTS-----SPTYNIIGGWMKVVKNS 122
++ K G+ ++D W G+ LK+WE+ S YN+I GW VV+ +
Sbjct: 266 IIKEDINNNKKIGVGAILVDQRSVKW-GVMLKRWELKKESGKGSWNYNLICGWNDVVEAN 324
Query: 123 GLEPEDVVQLWSFRSNGQLNFAL 145
GL+ D + +WSFR G L FA+
Sbjct: 325 GLKEGDNISVWSFRCRGVLCFAM 347
>AT1G05920.1 | Symbols: | Domain of unknown function (DUF313) |
chr1:1797044-1797991 FORWARD LENGTH=315
Length = 315
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 8 PDQPVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEV 67
P +P ++V ++ G + KL+I+K L +DV+ NR SIP ++ DFLT +E
Sbjct: 161 PQEPQWLLQVMSRMN--GAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDES 218
Query: 68 TLLNGREGGKPA--GLTVNVLDPSLELWEGLRLKKWEMTSSP-----TYNIIGGWMKVVK 120
L++ E G+ ++D + W + K+W MT+ ++ + G W VV+
Sbjct: 219 RLIDEDEITNEGNMGVAAFLVDQRTKKW-NMGFKQWFMTTDSGSSYWSFVLRGEWSNVVE 277
Query: 121 NSGLEPEDVVQLWSFRSNGQLNFALV 146
+GL+ D + LWSFRSN L FALV
Sbjct: 278 TNGLKEGDKISLWSFRSNDILCFALV 303
>AT2G32645.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:13851989-13852859 REVERSE LENGTH=189
Length = 189
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 25 GGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGG-KPAGLTV 83
G KL+ ++L KSD++ G R +P Q+ DFLT++E +++ + G+ V
Sbjct: 5 NGYNPKLISTRELFKSDLDKGKARLQVPFNQVKTPDFLTEDETRIIHENAMKIRDDGVPV 64
Query: 84 NVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVV---KNSGLEPEDVVQLWSFRS-NG 139
N++DP + L L+KW+M + Y + GW V+ K++ + +DV LWSFRS G
Sbjct: 65 NLVDPRMNK-HALELRKWKMKGNWNYVFVKGWNDVLDANKSNSFKEKDVFPLWSFRSGTG 123
Query: 140 QLNFALV 146
+L FAL
Sbjct: 124 KLCFALT 130
>AT5G24050.1 | Symbols: | Domain of unknown function (DUF313) |
chr5:8128353-8129402 REVERSE LENGTH=349
Length = 349
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 15 IEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQ-EEVTLLNGR 73
++V ++E + KL+ +K L +DVN NR S+P +L DFLT E + +
Sbjct: 204 VKVMTNMKE--AKDAKLIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDI 261
Query: 74 EGGKPAGLTVNVLDPSLELWEGLRLKKWEMTS-----SPTYNIIGGWMKVVKNSGLEPED 128
G+ ++D + W G+ LK+WEM S +YN+I GW +V+ + L+ D
Sbjct: 262 NNNNKIGVGAILVDQRCKKW-GVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGD 320
Query: 129 VVQLWSFRSNGQLNFAL 145
+ LWSFR G L FA+
Sbjct: 321 NITLWSFRCCGILCFAM 337
>AT2G31720.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:13485034-13485975 REVERSE LENGTH=313
Length = 313
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 21 IQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGRE---GGK 77
++E+ G + KL+ K L SDV+ R +P +QIL DFL +EE+ ++
Sbjct: 137 MREVNGMDAKLIFVKVLPNSDVDELQTRLMMPWKQILDMDFLNEEELEKIDRHHKKISAS 196
Query: 78 PAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVVQLWSFRS 137
G V V++ S L L+LK+W+MTS+ Y + GW KVV ++ L+ +++WSF S
Sbjct: 197 DKGADVIVVN-SKGLQRKLKLKRWDMTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHS 255
Query: 138 NGQLNFALV 146
L FA V
Sbjct: 256 PDMLFFAFV 264
>AT2G27410.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:11724646-11725419 REVERSE LENGTH=257
Length = 257
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 22 QELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGG-KPAG 80
+E G KL+ ++L+K+D+ R S+P +Q+ DFLT++E +++ + G
Sbjct: 79 REENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNG 138
Query: 81 LTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSG--LEPEDVVQLWSFRS- 137
+ VN +DP L L L+KW+M + Y + GW V+ + +DV LWSFRS
Sbjct: 139 VPVNFVDPELNK-HVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG 197
Query: 138 NGQLNFALV 146
G+L FAL
Sbjct: 198 TGKLCFALT 206
>AT5G38490.1 | Symbols: | Domain of unknown function (DUF313) |
chr5:15411868-15412962 REVERSE LENGTH=364
Length = 364
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 30 KLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGGKPA-----GLTVN 84
+L+ ++ L KSDVN+ +R +P Q+++ DFLT E + E G+
Sbjct: 237 RLIFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTV 296
Query: 85 VLDPSLELWEGLRLKKWEMTSSP-----TYNIIGGWMKVVKNSGLEPEDVVQLWSFRSNG 139
+++ + W GLR K W M Y + GW VVK+S L+ D + LW+FR G
Sbjct: 297 LVNQRFQKW-GLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRG 355
Query: 140 QLNFAL 145
L FAL
Sbjct: 356 VLCFAL 361
>AT2G24670.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:10492812-10493567 FORWARD LENGTH=251
Length = 251
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 30 KLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGG-KPAGLTVNVLDP 88
K +I K+L ++DV+ +R SIP QI+ +FL EE + + G+ ++D
Sbjct: 130 KKIIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEKRAIEEDANRVRKEGVDAILVDS 189
Query: 89 SL-ELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVVQLWSFRSNGQLNFALVK 147
L E LRL+ +M YN++ GW +VV + LE ++LWSF ++ L FALV
Sbjct: 190 HLREFPVNLRLR--DMRGILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADDTLYFALVP 247
Query: 148 L 148
L
Sbjct: 248 L 248
>AT1G32030.1 | Symbols: | Domain of unknown function (DUF313) |
chr1:11514594-11515595 FORWARD LENGTH=333
Length = 333
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 24 LGGSE-VKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGGKPAGLT 82
+ GSE +L+ +K L ++DV +R +P ++ DFLT E+ +L E G+
Sbjct: 197 MQGSEGPRLIYEKTLTETDVKPVQSRLLMPFNTLIRNDFLTPVELRILLELEDDT-DGVG 255
Query: 83 VNVLDPSLELWE---GLRLKKWEMTS-----SPTYNIIGGWMKVVKNSGLEPEDVVQLWS 134
++DP WE G+ LKK EM S Y II GW +V+ + LE +D + +WS
Sbjct: 256 ATLVDP----WEVKWGVILKKREMKKYSGKGSLNYAIICGWNDIVEANVLEKDDDISIWS 311
Query: 135 FR--SNGQLNFALV 146
FR NG L+FALV
Sbjct: 312 FRRGRNGILSFALV 325
>AT1G05930.1 | Symbols: | Domain of unknown function (DUF313) |
chr1:1799418-1800933 FORWARD LENGTH=318
Length = 318
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 17 VQEKIQELGGSEVKLVIQKKLHKSDV-NAGHNRFSIPSQQILARDFLTQEEVTLLN-GRE 74
+++ ++++ ++ L+++K L +DV H RFS+ ++++ DFL EE ++L
Sbjct: 164 LRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEERSILEEDTY 223
Query: 75 GGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVVQLWS 134
+ G+ ++D + W + LK+W Y + GW VVK + L+ D + LW+
Sbjct: 224 NDETMGVGAILVDQRSQKWSVI-LKRW----GQNYFLSCGWNDVVKANKLKAGDDICLWA 278
Query: 135 FRSNGQLNFAL 145
FR +G L FA+
Sbjct: 279 FRCDGVLCFAM 289
>AT5G38500.1 | Symbols: | Domain of unknown function (DUF313) |
chr5:15416018-15417253 REVERSE LENGTH=411
Length = 411
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 30 KLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGREGGKPAGLTVNVL--- 86
KL+ ++ L KSDVN+ +R IP Q+++ DFLT EE + + ++V +
Sbjct: 265 KLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVC 324
Query: 87 ---------------------DPSLELWEGLRLKKWEMTSSPTYNIIG-----GWMKVVK 120
+ ++W GLR K W M + + W VVK
Sbjct: 325 QAKQEDEDKDDEDIGAGTILVNQRFKMW-GLRFKIWGMEKDSGHGTLNYILNWDWNDVVK 383
Query: 121 NSGLEPEDVVQLWSFRSNGQLNFAL 145
+ L+ D + LW+FR G L FAL
Sbjct: 384 GNSLKAGDNIGLWTFRCRGVLCFAL 408
>AT3G49610.1 | Symbols: | Domain of unknown function (DUF313) |
chr3:18390413-18391417 REVERSE LENGTH=334
Length = 334
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 21 IQELGGSE--VKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLL-----NGR 73
++++ G+E +KL+ +K L +DV +R IP ++L DFLT EE +
Sbjct: 195 MRKMKGAEGPIKLIYEKTLTATDVKPSESRLLIPFNKLLRNDFLTPEESRAIAIDKEEEE 254
Query: 74 EGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPT------YNIIGGWMKVVKNSGLEPE 127
E K G+ +++ + W LR W M + Y + GW VV + L+
Sbjct: 255 EDTKKIGVKTIIVNQFSKEW-SLRFLIWVMKKKKSGNGTLYYTLNRGWNGVVSGNKLKAN 313
Query: 128 DVVQLWSFRSNGQLNFALVK 147
D + LW+FR G L FAL K
Sbjct: 314 DNISLWTFRCGGVLCFALEK 333
>AT2G31420.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:13393364-13393993 REVERSE LENGTH=209
Length = 209
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 26 GSEVKLVIQKK-LHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLN-GREGGKPAGLTV 83
G + KL+I+++ L +D+ S+ ++ DFLT++E L+ K GL V
Sbjct: 73 GYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKV 132
Query: 84 NVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVVQLWSFRS-NGQLN 142
++DP + + LKKW + Y + GW V+ + DV+++WSFR +G+L
Sbjct: 133 FLVDPESDK-HVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDGSGKLC 191
Query: 143 FAL 145
FAL
Sbjct: 192 FAL 194
>AT2G18810.1 | Symbols: | Domain of unknown function (DUF313) |
chr2:8147939-8149469 REVERSE LENGTH=234
Length = 234
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 51 IPSQQILARDFLTQEEVTLLN---GREGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSP 107
+ ++ IL DFL +EE+ ++ + G V +L S L L+LK+W+MTS+
Sbjct: 85 VSNKPILDMDFLNEEELEKIDRHYKKISDSDKGADV-ILVNSEGLQRKLKLKRWDMTSTS 143
Query: 108 TYNIIGGWMKVVKNSGLEPEDVVQLWSFRSNGQLNFALV 146
Y + GW KVV + LE ++LWSF S L FALV
Sbjct: 144 NYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFALV 182
>AT1G05615.1 | Symbols: | Domain of unknown function (DUF313) |
chr1:1677507-1678270 REVERSE LENGTH=172
Length = 172
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 96 LRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVVQLWSFRSNGQLNFALVKL 148
L L++W M +SP Y ++ G VVK L+ + +++WSF + QLN A+V L
Sbjct: 114 LNLRRWNMGTSPLYILVSGRYNVVKGCRLKEGNEIRIWSFHFDDQLNLAMVPL 166