Miyakogusa Predicted Gene
- Lj2g3v3184270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3184270.1 Non Chatacterized Hit- tr|I1JJB4|I1JJB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.05,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Rab3 GTPase-activating
protein catalytic subuni,CUFF.39841.1
(605 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55060.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 704 0.0
AT5G55060.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 611 e-175
AT5G58510.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 152 4e-37
>AT5G55060.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins
in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117;
Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes -
33 (source: NCBI BLink). | chr5:22342079-22346400
FORWARD LENGTH=662
Length = 662
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/604 (58%), Positives = 435/604 (72%), Gaps = 28/604 (4%)
Query: 3 SPPTFVSKARTAFNSAAAKAERVLMDFKSDREHDKESPXXXXXXXFTKQXXXXXXXXXXX 62
+PP+ VSKARTAFNSAAAKAERV D KSDRE +K+S
Sbjct: 4 APPSLVSKARTAFNSAAAKAERVFTDLKSDREEEKQS-----------------TRNVND 46
Query: 63 XKLRGEFKHKKWRPPHIGIKQDWQDRFRNIRIGKKDVEDTDKVGDANMAVAFYDENLYIL 122
+ E K + WR HI KQ+WQ++ +N+RIG+K+VED DKV D+ MA FYDEN YIL
Sbjct: 47 SQEENEVKTQGWRTAHIRKKQEWQNKLKNLRIGRKEVEDQDKVEDSAMAAPFYDENFYIL 106
Query: 123 NMKNDQEAKASEAMPSVEGLTAATKDPIPPASVLKQLAIAVEAGSKSKSMKDFIASTGGS 182
K +QEAKAS+ VE L A + IP ASV+KQLA+A+EAG ++K++KDF+AS+G S
Sbjct: 107 KAKQEQEAKASDVGCMVESLNAVDANSIPLASVVKQLAVAIEAGKRAKNVKDFVASSGSS 166
Query: 183 SPARERXXXXXXXXXXXXXREKEDNLTSEFSSDEKVVHLINSLFDPEGDFLRRKINSDPE 242
SP RER EKED L + ++K+V LIN+LF+ + FL RKI SD E
Sbjct: 167 SPVRERGGLSLSAVKSLVLGEKEDKLGFDSGDEDKLVSLINALFNVDSGFLSRKIVSDLE 226
Query: 243 E-TAITSLPRDIHGAPPESLVVKLAEIIGNYKTLRKMALFWCRVVAELRKLWSEEKHLPG 301
T +S +D+H APP S VVKLAE+IG++ T R+MALFWCRVV ELR+ W+EEKH+P
Sbjct: 227 SPTNRSSFAKDLHAAPPSSFVVKLAEVIGSFTTPRRMALFWCRVVEELRRFWNEEKHIPW 286
Query: 302 IPQNEIPDLKSCLLHQQFQVINCCITRKRLRAIATESLDSMMMQASSNIKEPTNNDGEAP 361
IP + PDLKSCLLHQ QVINCC+ RK A+E+LD++M QASS ++ +D
Sbjct: 287 IPLDNNPDLKSCLLHQWLQVINCCLARKARNVAASEALDAVMRQASSANEK---SDVSES 343
Query: 362 ASPVLYARLDNGELVLRLGADCPAGDLTLLETGEPVYSPLTQEGPLLTEDLIRETEEFVL 421
+LYA+ ++GEL+LRLG +LT+LETGEPVYSP+TQEGPLLTEDLIRETEE VL
Sbjct: 344 MGSLLYAKSNSGELILRLGVYNQVENLTMLETGEPVYSPITQEGPLLTEDLIRETEELVL 403
Query: 422 RTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLS 481
RTGS+GAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWT+N D +S
Sbjct: 404 RTGSMGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTENGNMSGD-------DSSP 456
Query: 482 TRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNALEDIHPSELYRQL 541
RGQLS RMQKEGNLWRELWET+KP+PAVKQAPLFDEDLAVEGILN LEDI +EL+ QL
Sbjct: 457 VRGQLSTRMQKEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNYLEDIPAAELFEQL 516
Query: 542 FVSLLGLGFAIAEPMLSSNSDFSKVFYDCKEYIVATCQSNKLSEKVDELVQVYETVETML 601
F SL+ LGF + EP+L++N D SK+F++CK+Y+VA CQ ++K+D+L QVYETVETML
Sbjct: 517 FTSLVSLGFVMVEPVLATNDDLSKLFFECKDYVVAICQGGAWTDKLDDLCQVYETVETML 576
Query: 602 LNPE 605
L PE
Sbjct: 577 LRPE 580
>AT5G55060.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1). | chr5:22343079-22346400 FORWARD
LENGTH=569
Length = 569
Score = 611 bits (1575), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/497 (61%), Positives = 371/497 (74%), Gaps = 11/497 (2%)
Query: 110 MAVAFYDENLYILNMKNDQEAKASEAMPSVEGLTAATKDPIPPASVLKQLAIAVEAGSKS 169
MA FYDEN YIL K +QEAKAS+ VE L A + IP ASV+KQLA+A+EAG ++
Sbjct: 1 MAAPFYDENFYILKAKQEQEAKASDVGCMVESLNAVDANSIPLASVVKQLAVAIEAGKRA 60
Query: 170 KSMKDFIASTGGSSPARERXXXXXXXXXXXXXREKEDNLTSEFSSDEKVVHLINSLFDPE 229
K++KDF+AS+G SSP RER EKED L + ++K+V LIN+LF+ +
Sbjct: 61 KNVKDFVASSGSSSPVRERGGLSLSAVKSLVLGEKEDKLGFDSGDEDKLVSLINALFNVD 120
Query: 230 GDFLRRKINSDPEE-TAITSLPRDIHGAPPESLVVKLAEIIGNYKTLRKMALFWCRVVAE 288
FL RKI SD E T +S +D+H APP S VVKLAE+IG++ T R+MALFWCRVV E
Sbjct: 121 SGFLSRKIVSDLESPTNRSSFAKDLHAAPPSSFVVKLAEVIGSFTTPRRMALFWCRVVEE 180
Query: 289 LRKLWSEEKHLPGIPQNEIPDLKSCLLHQQFQVINCCITRKRLRAIATESLDSMMMQASS 348
LR+ W+EEKH+P IP + PDLKSCLLHQ QVINCC+ RK A+E+LD++M QASS
Sbjct: 181 LRRFWNEEKHIPWIPLDNNPDLKSCLLHQWLQVINCCLARKARNVAASEALDAVMRQASS 240
Query: 349 NIKEPTNNDGEAPASPVLYARLDNGELVLRLGADCPAGDLTLLETGEPVYSPLTQEGPLL 408
++ +D +LYA+ ++GEL+LRLG +LT+LETGEPVYSP+TQEGPLL
Sbjct: 241 ANEK---SDVSESMGSLLYAKSNSGELILRLGVYNQVENLTMLETGEPVYSPITQEGPLL 297
Query: 409 TEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASI 468
TEDLIRETEE VLRTGS+GAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWT+N
Sbjct: 298 TEDLIRETEELVLRTGSMGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTENGNMS 357
Query: 469 EDSDVFDSGESLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNA 528
D +S RGQLS RMQKEGNLWRELWET+KP+PAVKQAPLFDEDLAVEGILN
Sbjct: 358 GD-------DSSPVRGQLSTRMQKEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNY 410
Query: 529 LEDIHPSELYRQLFVSLLGLGFAIAEPMLSSNSDFSKVFYDCKEYIVATCQSNKLSEKVD 588
LEDI +EL+ QLF SL+ LGF + EP+L++N D SK+F++CK+Y+VA CQ ++K+D
Sbjct: 411 LEDIPAAELFEQLFTSLVSLGFVMVEPVLATNDDLSKLFFECKDYVVAICQGGAWTDKLD 470
Query: 589 ELVQVYETVETMLLNPE 605
+L QVYETVETMLL PE
Sbjct: 471 DLCQVYETVETMLLRPE 487
>AT5G58510.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:23648287-23654421 REVERSE LENGTH=963
Length = 963
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 180/405 (44%), Gaps = 54/405 (13%)
Query: 249 LPRDIHGAPPESLVVKL---AEIIGNYKTLRKMALFWCRVVAELRKLWSEEKHLPGIPQN 305
L R + AP ESL + + GN +R +A W V E+R W E + LP +P +
Sbjct: 411 LSRALKAAPLESLFTQFCLHSLWFGNC-NIRAIAFLWIEFVREVRWCWEETQPLPKMPID 469
Query: 306 EIPDLKSCLLHQQFQVINCCITRKR------LRAIA----------------------TE 337
DL SCL++Q+ ++ CI +KR L I T
Sbjct: 470 GSIDLSSCLINQKLHLLAICIEKKREMNEEFLDCIGSDDSSDASVSMEEHHKVDKRRNTS 529
Query: 338 SLDSMMMQASSNIKEPTNNDGEAPASPVLYARLDNGEL-VLRLGADCPAGDLTLLETGEP 396
S + + + S+I E T+ ++ +R G+ P G + LL++ +
Sbjct: 530 SEEELRRKRDSSIAEDTSKQLRFERKTERTNSVNQSPTDAIRRGSAGPVGTMMLLKSRQQ 589
Query: 397 VYSPLTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQL-----LSDMQAFKAANPGCILED 451
+++P TQ+ PL+TED+ E + V G QL LSDM AFKAANP + ED
Sbjct: 590 LHAPFTQDPPLMTEDMHEERLQAVEAFGDSLNVPGQLEKDILLSDMSAFKAANPDAVFED 649
Query: 452 FVRWHSPPDWTDNEASIEDSDVFDSGES----LSTRGQLSRRMQKEGNLWRELWETSKPV 507
F+RWHSP DW E + S E RG+LS+RM +GNLWR+ W + +
Sbjct: 650 FIRWHSPGDWESFEPKTTEPSAGPSTEGSKDEWPPRGRLSQRMSDQGNLWRKSWNDAPAL 709
Query: 508 PAVKQAPLFDEDLAVEGILNALEDIHPSELYRQLFVSLL-----GLGFAIAEPMLSSNSD 562
PA Q PL D + E I++ LE + P +L Q+ + L M S
Sbjct: 710 PADDQKPLLDPNREGEKIVHYLETVRPHQLLEQMVCTAFRGSADTLNQTNVGNMRQMTSK 769
Query: 563 FSKVFYDCKEYIVATCQSNKLSEK------VDELVQVYETVETML 601
+++ K + + Q N L +K + L V+E VE ++
Sbjct: 770 LEQLYLIMK-FTLGALQRNNLPDKAKTVKDLKRLCMVFENVEKLV 813