Miyakogusa Predicted Gene

Lj2g3v3164170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3164170.1 tr|G7I4S9|G7I4S9_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_1g075520 PE=4
SV=1,83.78,0,LeuD/IlvD-like,Aconitase/3-isopropylmalate dehydratase,
swivel; no description,Aconitase/3-isopropyl,CUFF.39826.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350...   251   9e-68
AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169772...   245   9e-66
AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169779...   244   1e-65
AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-135484...   242   7e-65

>AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350
           FORWARD LENGTH=990
          Length = 990

 Score =  251 bits (642), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 110/148 (74%), Positives = 131/148 (88%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF++ YESIT GNPMW++LSVP +TLYSWDPNS YIHEPPYFK+MTMDPPG   ++D YC
Sbjct: 704 MFRATYESITKGNPMWNKLSVPENTLYSWDPNSTYIHEPPYFKDMTMDPPGPHNVKDAYC 763

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G I KDSPAA++L+E GVD +DFNSYGSRRGNDE+M RGTF++I
Sbjct: 764 LLNFGDSITTDHISPAGNIQKDSPAAKFLMERGVDRKDFNSYGSRRGNDEIMARGTFANI 823

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNKL+NGEVGPKT+H P+GEKLSV++
Sbjct: 824 RIVNKLMNGEVGPKTVHIPSGEKLSVFD 851


>AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977278
           REVERSE LENGTH=795
          Length = 795

 Score =  245 bits (625), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 109/148 (73%), Positives = 125/148 (84%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MFK+ YE+IT GN MW++LSV S TLY WDP S YIHEPPYFK MTM PPG  G++D YC
Sbjct: 509 MFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSPPGPHGVKDAYC 568

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G IHKDSPAA+YL+E GVD +DFNSYGSRRGNDE+M RGTF++I
Sbjct: 569 LLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANI 628

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNK L GEVGPKT+H PTGEKLSV++
Sbjct: 629 RIVNKHLKGEVGPKTVHIPTGEKLSVFD 656


>AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977949
           REVERSE LENGTH=898
          Length = 898

 Score =  244 bits (624), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 109/148 (73%), Positives = 125/148 (84%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MFK+ YE+IT GN MW++LSV S TLY WDP S YIHEPPYFK MTM PPG  G++D YC
Sbjct: 612 MFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSPPGPHGVKDAYC 671

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G IHKDSPAA+YL+E GVD +DFNSYGSRRGNDE+M RGTF++I
Sbjct: 672 LLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANI 731

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNK L GEVGPKT+H PTGEKLSV++
Sbjct: 732 RIVNKHLKGEVGPKTVHIPTGEKLSVFD 759


>AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-13548427
           FORWARD LENGTH=995
          Length = 995

 Score =  242 bits (617), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 108/148 (72%), Positives = 127/148 (85%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MFKS YE+IT GNP+W+ELS PSSTLYSWDPNS YIHEPPYFKNMT +PPG + ++D YC
Sbjct: 709 MFKSSYETITEGNPLWNELSAPSSTLYSWDPNSTYIHEPPYFKNMTANPPGPREVKDAYC 768

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD +TTDHISP G I K SPAA++L++ GV  +DFNSYGSRRGNDEVM RGTF++I
Sbjct: 769 LLNFGDSVTTDHISPAGNIQKTSPAAKFLMDRGVISEDFNSYGSRRGNDEVMARGTFANI 828

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNKLL GEVGP T+H PTGEKLSV++
Sbjct: 829 RIVNKLLKGEVGPNTVHIPTGEKLSVFD 856