Miyakogusa Predicted Gene

Lj2g3v3152930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3152930.1 Non Chatacterized Hit- tr|B9G712|B9G712_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,37.08,0.0001,seg,NULL; Peptide methionine sulfoxide
reductase,Peptide methionine sulphoxide reductase MsrA; no
de,CUFF.39798.1
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4...   293   5e-80
AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfox...   292   9e-80
AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfox...   291   2e-79
AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfox...   275   2e-74
AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase...    98   3e-21
AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase...    97   7e-21

>AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4 |
           chr4:12898802-12899998 REVERSE LENGTH=258
          Length = 258

 Score =  293 bits (750), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 139/203 (68%), Positives = 162/203 (79%), Gaps = 2/203 (0%)

Query: 2   NLLSRLGLSS-PRA-GENMDSSIAQGPDNDIPXXXXXXXXXXXXXXWGVELAFQRVSGVT 59
           NL +RLG  S P+A  +   ++IAQGPD+D+P              WGVELA+QRV GVT
Sbjct: 56  NLFNRLGFGSRPQAQADPSSAAIAQGPDDDVPSSGQQFAQFGAGCFWGVELAYQRVPGVT 115

Query: 60  KTEVGYSQGLLHNPRYEDVCSGTTNHSEVVRVQYDPKDCSYGSLLDVFWARHDPTALNRQ 119
           KTEVGYS G++HNP YEDVC+GTT H+EVVRVQYDPK+CS+ SLLDVFW RHDPT LNRQ
Sbjct: 116 KTEVGYSHGIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFESLLDVFWNRHDPTTLNRQ 175

Query: 120 GSDVGTQYRSGIYYYTPEQEKEAQESLEQQQKKLNRKIVTEILPAKKFYRAEEYHQQYLE 179
           G DVGTQYRSGIYYYT EQE+ A+E++E+QQK LN++IVTEILPA KFYRAE YHQQYL 
Sbjct: 176 GGDVGTQYRSGIYYYTDEQERIAREAVEKQQKILNKRIVTEILPATKFYRAENYHQQYLA 235

Query: 180 KGGRFGSKQSSSKGCNDPIRCYG 202
           KGGR G +QS+ KGC DPIRCYG
Sbjct: 236 KGGRMGLRQSAEKGCKDPIRCYG 258


>AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfoxide
           reductase 1 | chr5:24775107-24776147 FORWARD LENGTH=202
          Length = 202

 Score =  292 bits (748), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 139/203 (68%), Positives = 167/203 (82%), Gaps = 2/203 (0%)

Query: 1   MNLLSRLGLSSPRAGENMDSS-IAQGPDNDIPXXXXXXXXXXXXXXWGVELAFQRVSGVT 59
           MN+L++LG+ S R   NMD S IAQ  D++ P              W VELA+QRV GVT
Sbjct: 1   MNILNKLGIGSSRQ-TNMDPSPIAQVIDDEAPAPGNQFTQFGAGCFWSVELAYQRVPGVT 59

Query: 60  KTEVGYSQGLLHNPRYEDVCSGTTNHSEVVRVQYDPKDCSYGSLLDVFWARHDPTALNRQ 119
           +TEVGYSQG+ H+P Y+DVCSGTTNH+E+VRVQYDPK+CSY SLLD+FW++HDPT LNRQ
Sbjct: 60  QTEVGYSQGITHDPSYKDVCSGTTNHAEIVRVQYDPKECSYQSLLDLFWSKHDPTTLNRQ 119

Query: 120 GSDVGTQYRSGIYYYTPEQEKEAQESLEQQQKKLNRKIVTEILPAKKFYRAEEYHQQYLE 179
           G+DVGTQYRSGIY+Y PEQEK A+ESLE+ Q++++RK+VTEILPAKKFYRAEE+HQQYL 
Sbjct: 120 GNDVGTQYRSGIYFYNPEQEKLARESLERHQQQVDRKVVTEILPAKKFYRAEEHHQQYLS 179

Query: 180 KGGRFGSKQSSSKGCNDPIRCYG 202
           KGGRFG KQS+ KGCNDPIRCYG
Sbjct: 180 KGGRFGLKQSTEKGCNDPIRCYG 202


>AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfoxide
           reductase 3 | chr5:2362760-2364286 REVERSE LENGTH=202
          Length = 202

 Score =  291 bits (745), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/203 (69%), Positives = 162/203 (79%), Gaps = 2/203 (0%)

Query: 1   MNLLSRLGLSSPRAGENMDSS-IAQGPDNDIPXXXXXXXXXXXXXXWGVELAFQRVSGVT 59
           MN+L+RLGL S     NMD S IAQG D+D P              WGVELAFQRV GVT
Sbjct: 1   MNILNRLGLGS-SGQTNMDPSPIAQGNDDDTPAPGNQFAQFGAGCFWGVELAFQRVPGVT 59

Query: 60  KTEVGYSQGLLHNPRYEDVCSGTTNHSEVVRVQYDPKDCSYGSLLDVFWARHDPTALNRQ 119
           +TE GY+QG + NP Y DVCSGTT HSEVVRVQYD  DC+Y SLLD+FW+RHDPT LNRQ
Sbjct: 60  QTEAGYTQGTVDNPSYGDVCSGTTGHSEVVRVQYDLNDCTYESLLDLFWSRHDPTTLNRQ 119

Query: 120 GSDVGTQYRSGIYYYTPEQEKEAQESLEQQQKKLNRKIVTEILPAKKFYRAEEYHQQYLE 179
           G+DVGTQYRSGIY+YTPEQEK A+ESLE+ Q+++ RKI+TEILPAKKFYRAEE+HQQYL 
Sbjct: 120 GNDVGTQYRSGIYFYTPEQEKLARESLERHQQQMERKIMTEILPAKKFYRAEEHHQQYLS 179

Query: 180 KGGRFGSKQSSSKGCNDPIRCYG 202
           KGGRFG  QS++KGCNDPIRCYG
Sbjct: 180 KGGRFGQGQSTAKGCNDPIRCYG 202


>AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfoxide
           reductase 2 | chr5:2360844-2361885 REVERSE LENGTH=218
          Length = 218

 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 126/185 (68%), Positives = 147/185 (79%)

Query: 18  MDSSIAQGPDNDIPXXXXXXXXXXXXXXWGVELAFQRVSGVTKTEVGYSQGLLHNPRYED 77
           + S IAQ PDND+P              WGVELAFQR+ GVT TEVGY+ G+ HNP YED
Sbjct: 34  VPSPIAQEPDNDVPAPGNEFAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYED 93

Query: 78  VCSGTTNHSEVVRVQYDPKDCSYGSLLDVFWARHDPTALNRQGSDVGTQYRSGIYYYTPE 137
           VC+ TTNH+EVVRVQYDPK+C+Y +LLD+FW+RH+PT LNRQG  +G QYRSGIY+YTPE
Sbjct: 94  VCTNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPE 153

Query: 138 QEKEAQESLEQQQKKLNRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGSKQSSSKGCNDP 197
           QEK A+ESLE++QKKL  KIVTEILPAKKFY+AEEYHQQYL KGG  G+ QS +K C DP
Sbjct: 154 QEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPAKSCKDP 213

Query: 198 IRCYG 202
           IRCYG
Sbjct: 214 IRCYG 218


>AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841496 FORWARD LENGTH=254
          Length = 254

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 5/133 (3%)

Query: 46  WGVELAFQRVSGVTKTEVGYSQGLLHNPRYEDVCSGTTNHSEVVRVQYDPKDCSYGSLLD 105
           W  E AF  ++GV +T  GY+ G   NP Y ++     +H+E V+V+YDP+   Y  LLD
Sbjct: 63  WRSEAAFGCINGVVRTSAGYAGGTKTNPEYRNL----GDHAESVQVEYDPRIIGYRQLLD 118

Query: 106 VFWARHDPTALNRQGSDVGTQYRSGIYYYTPEQEKEAQESLEQQQKKLNRKIV-TEILPA 164
           VFW+ HD   +  QG DVG QYRS I+  + E+ + A  S E++Q      IV T+I   
Sbjct: 119 VFWSSHDSRQVFGQGPDVGNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQL 178

Query: 165 KKFYRAEEYHQQY 177
             FYRAE  HQ++
Sbjct: 179 GTFYRAEPDHQKF 191


>AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841206 FORWARD LENGTH=192
          Length = 192

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 46  WGVELAFQRVSGVTKTEVGYSQGLLHNPRYEDVCSGTTNHSEVVRVQYDPKDCSYGSLLD 105
           W  E AF  ++GV +T  GY+ G   NP Y ++     +H+E V+V+YDP+   Y  LLD
Sbjct: 63  WRSEAAFGCINGVVRTSAGYAGGTKTNPEYRNL----GDHAESVQVEYDPRIIGYRQLLD 118

Query: 106 VFWARHDPTALNRQGSDVGTQYRSGIYYYTPEQEKEAQESLEQQQKKLNRKIV-TEILPA 164
           VFW+ HD   +  QG DVG QYRS I+  + E+ + A  S E++Q      IV T+I   
Sbjct: 119 VFWSSHDSRQVFGQGPDVGNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQL 178

Query: 165 KKFYRAEEYHQQYL 178
             FYRAE  HQ  L
Sbjct: 179 GTFYRAEPDHQVQL 192