Miyakogusa Predicted Gene

Lj2g3v3150890.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3150890.2 Non Chatacterized Hit- tr|I1J208|I1J208_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.93,4e-17,seg,NULL,CUFF.39797.2
         (500 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20490.1 | Symbols:  | unknown protein; Has 754 Blast hits to...   159   6e-39

>AT3G20490.1 | Symbols:  | unknown protein; Has 754 Blast hits to
           165 proteins in 64 species: Archae - 0; Bacteria - 48;
           Metazoa - 26; Fungi - 25; Plants - 36; Viruses - 0;
           Other Eukaryotes - 619 (source: NCBI BLink). |
           chr3:7154178-7156382 REVERSE LENGTH=458
          Length = 458

 Score =  159 bits (401), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 161/362 (44%), Gaps = 60/362 (16%)

Query: 139 KRKQGSDIPASSRMDTGQSGFVFPELTASPLRRFHLIXXXXXXXXXXXXXXLNEVDPGLK 198
           KRKQ SD+ AS+         +F   + SPLRRF L+              L+       
Sbjct: 141 KRKQ-SDVQASAASGISSVASLFQMSSRSPLRRFQLLDSDSEDDHPSTSRDLSGATKKHD 199

Query: 199 EAMSNQSKPSSSLGQNRKTSFHVNQNPDLWKDFSPVKPFSVPTPAFNEICEEYFNSAKHK 258
               NQ  PS +    RK    +    DLWKDFSP     + TPAF+++C++YF S K  
Sbjct: 200 SFSKNQ--PSIASKPKRKEPGSIPCIKDLWKDFSPASS-KIQTPAFDDVCQDYFISIKTT 256

Query: 259 TVEQSGIDISESHNERYLGVNSSFQKDPQLSESTDPLPPAHRYFFHEDPRIRQLVCSRLC 318
           +  Q       S +       + FQ+     + + P PP+HR+F H DPRIR L   RL 
Sbjct: 257 STAQKQSSAVASSSNSGNHNLTGFQQTELFHDFSHPSPPSHRFFLHSDPRIRNLARQRLP 316

Query: 319 NFSPLR-VNRVNQQPNASHIDYMGQFDNGGASKTQGVKVNSTTSRKNKSKISSVEETFNA 377
           NF PL  VN    Q     +DYM QF + G+SK       S    K KSK+S  +E+ + 
Sbjct: 317 NFFPLGIVNDRESQREVFLVDYMNQFGSKGSSKAGDSSSKSCRRGKTKSKVSKSQESAHN 376

Query: 378 SEGWVDPKVISHFSSGESSRKKATKRNSTKNSVSKRRNETNKSNSSNVPYASGNWVEPKS 437
           SEGW++PK  +                                                 
Sbjct: 377 SEGWLNPKTRA------------------------------------------------- 387

Query: 438 CTSMPKDAGKRRVQAGVQEGVQSAGHWFTNSDGRKVYVNKSGKELTGRIAYSHYRKVNLL 497
             + PKDAGKRRV A       SAGHWFT+ +GRKVY++KSG+E +G+ AY  Y+K N +
Sbjct: 388 --AAPKDAGKRRVSA----DSGSAGHWFTSPEGRKVYISKSGQEFSGQSAYRCYKKENGV 441

Query: 498 AL 499
             
Sbjct: 442 GF 443