Miyakogusa Predicted Gene

Lj2g3v3149230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3149230.1 Non Chatacterized Hit- tr|I1HSF4|I1HSF4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,52.38,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.40486.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54870.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   213   4e-56
AT4G27020.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   212   9e-56
AT1G70160.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   162   1e-40

>AT5G54870.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: vacuole;
           EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT4G27020.1); Has 1807 Blast
           hits to 1807 proteins in 277 species: Archae - 0;
           Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
           Viruses - 0; Other Eukaryotes - 339 (source: NCBI
           BLink). | chr5:22289149-22291604 FORWARD LENGTH=531
          Length = 531

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 91/130 (70%), Positives = 113/130 (86%)

Query: 33  VSALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQIDEWKGACFYQN 92
             ++KSPFHP+DLLP LP+QVSWPI+N+L+ A D+LP ++G ASS N   +WKGACF++N
Sbjct: 30  AESVKSPFHPRDLLPHLPRQVSWPILNSLYGAADLLPTFIGTASSGNDSVDWKGACFFEN 89

Query: 93  TAWMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYYFLAREHTLEIKE 152
           TAW+EFHNKSGSEFGGGTLHIK   AHSWTC+DLY+FATPYRVTW +YF++R+HT+E  E
Sbjct: 90  TAWLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFISRQHTVEFPE 149

Query: 153 WEGKAEYEYV 162
           W+GKAEYEYV
Sbjct: 150 WDGKAEYEYV 159


>AT4G27020.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: vacuole; BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr4:13568604-13571381
           REVERSE LENGTH=523
          Length = 523

 Score =  212 bits (539), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 113/129 (87%)

Query: 34  SALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQIDEWKGACFYQNT 93
           S+ K PFHP+DLLP+ P+QVSWP++N+L++AVD+LP ++G+AS  N   EWKGACFY+N 
Sbjct: 23  SSGKLPFHPRDLLPLFPRQVSWPVVNSLNTAVDLLPTFIGSASVRNDAVEWKGACFYENK 82

Query: 94  AWMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYYFLAREHTLEIKEW 153
           AW+E +NKSGSEFGGGTLHIKV  AHSWTC+D+Y+F TPYRVTWD+YF +REHT+E KEW
Sbjct: 83  AWLELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFASREHTMEFKEW 142

Query: 154 EGKAEYEYV 162
           EGKAEYEYV
Sbjct: 143 EGKAEYEYV 151


>AT1G70160.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT4G27020.1);
           Has 108 Blast hits to 108 proteins in 20 species: Archae
           - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89;
           Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
           | chr1:26420159-26422345 FORWARD LENGTH=523
          Length = 523

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 95/130 (73%), Gaps = 2/130 (1%)

Query: 35  ALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQIDEWKGACFYQNTA 94
           +LK PF   D+LP+LP+QVSWP++N+ H+AVD+LP+++G+ +  N   EWKGACF  N A
Sbjct: 24  SLKVPFSVNDVLPMLPRQVSWPVLNSFHNAVDLLPVFIGSVTPNNVSIEWKGACFNGNEA 83

Query: 95  WMEF--HNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYYFLAREHTLEIKE 152
            ++    ++     GGG LH+K S AHS TC+DLY+FATPYR+TWDYYF AR+HTL    
Sbjct: 84  RLDITGSDRDVPGLGGGVLHLKTSKAHSLTCMDLYVFATPYRITWDYYFSARDHTLNFDS 143

Query: 153 WEGKAEYEYV 162
           WE KAE EYV
Sbjct: 144 WEEKAELEYV 153