Miyakogusa Predicted Gene

Lj2g3v3125360.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3125360.1 tr|Q08CI9|Q08CI9_DANRE Zgc:153034 OS=Danio rerio
GN=pmt PE=2 SV=1,31.03,0.047,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; Methyltransf_11,Methyltransferase type
11,gene.g44291.t1.1
         (142 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73600.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   198   1e-51
AT1G73600.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   197   1e-51
AT1G48600.2 | Symbols: PMEAMT, AtPMEAMT | S-adenosyl-L-methionin...   192   8e-50
AT1G48600.1 | Symbols: PMEAMT, AtPMEAMT | S-adenosyl-L-methionin...   192   8e-50
AT3G18000.1 | Symbols: NMT1, XPL1, PEAMT | S-adenosyl-L-methioni...   189   4e-49
AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol meth...    51   3e-07

>AT1G73600.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:27670825-27673400 FORWARD LENGTH=490
          Length = 490

 Score =  198 bits (503), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 121/160 (75%), Gaps = 18/160 (11%)

Query: 1   MAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAML 60
           MAENFDV+V+GIDLS+NMIS A+E AIGLK  VEF+ ADC KK YPD TFDVIY+RD +L
Sbjct: 299 MAENFDVDVVGIDLSVNMISFALEHAIGLKCSVEFEVADCTKKEYPDNTFDVIYSRDTIL 358

Query: 61  HIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAY----- 115
           HI+DKP +FR FYKWLKPGGK+LITDYC+S  +PS +FA YIKK GY +HD++AY     
Sbjct: 359 HIQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPSPDFAIYIKKRGYDLHDVQAYGQMLR 418

Query: 116 -------------EQFVKTLKQELEALENKKDDFICEFGK 142
                        +QF+K LK+EL+A+E +K++FI +F K
Sbjct: 419 DAGFEEVIAEDRTDQFMKVLKRELDAVEKEKEEFISDFSK 458


>AT1G73600.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:27669224-27673400 FORWARD LENGTH=504
          Length = 504

 Score =  197 bits (502), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 121/160 (75%), Gaps = 18/160 (11%)

Query: 1   MAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAML 60
           MAENFDV+V+GIDLS+NMIS A+E AIGLK  VEF+ ADC KK YPD TFDVIY+RD +L
Sbjct: 313 MAENFDVDVVGIDLSVNMISFALEHAIGLKCSVEFEVADCTKKEYPDNTFDVIYSRDTIL 372

Query: 61  HIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAY----- 115
           HI+DKP +FR FYKWLKPGGK+LITDYC+S  +PS +FA YIKK GY +HD++AY     
Sbjct: 373 HIQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPSPDFAIYIKKRGYDLHDVQAYGQMLR 432

Query: 116 -------------EQFVKTLKQELEALENKKDDFICEFGK 142
                        +QF+K LK+EL+A+E +K++FI +F K
Sbjct: 433 DAGFEEVIAEDRTDQFMKVLKRELDAVEKEKEEFISDFSK 472


>AT1G48600.2 | Symbols: PMEAMT, AtPMEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr1:17966074-17969077 FORWARD
           LENGTH=491
          Length = 491

 Score =  192 bits (487), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 111/137 (81%)

Query: 1   MAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAML 60
           MAENFDV V+GIDLS+NMIS A+ERAIGLK  VEF+ ADC  KTYPD +FDVIY+RD +L
Sbjct: 300 MAENFDVHVVGIDLSVNMISFALERAIGLKCSVEFEVADCTTKTYPDNSFDVIYSRDTIL 359

Query: 61  HIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAYEQFVK 120
           HI+DKP +FR+F+KWLKPGGK+LITDYC+SA +PS EFAEYIK+ GY +HD++AY Q +K
Sbjct: 360 HIQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPEFAEYIKQRGYDLHDVQAYGQMLK 419

Query: 121 TLKQELEALENKKDDFI 137
               +    E++ D F+
Sbjct: 420 DAGFDDVIAEDRTDQFV 436


>AT1G48600.1 | Symbols: PMEAMT, AtPMEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr1:17966448-17969077 FORWARD
           LENGTH=475
          Length = 475

 Score =  192 bits (487), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 111/137 (81%)

Query: 1   MAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAML 60
           MAENFDV V+GIDLS+NMIS A+ERAIGLK  VEF+ ADC  KTYPD +FDVIY+RD +L
Sbjct: 284 MAENFDVHVVGIDLSVNMISFALERAIGLKCSVEFEVADCTTKTYPDNSFDVIYSRDTIL 343

Query: 61  HIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAYEQFVK 120
           HI+DKP +FR+F+KWLKPGGK+LITDYC+SA +PS EFAEYIK+ GY +HD++AY Q +K
Sbjct: 344 HIQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPEFAEYIKQRGYDLHDVQAYGQMLK 403

Query: 121 TLKQELEALENKKDDFI 137
               +    E++ D F+
Sbjct: 404 DAGFDDVIAEDRTDQFV 420


>AT3G18000.1 | Symbols: NMT1, XPL1, PEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:6154578-6157331 FORWARD
           LENGTH=491
          Length = 491

 Score =  189 bits (481), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/160 (55%), Positives = 118/160 (73%), Gaps = 18/160 (11%)

Query: 1   MAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAML 60
           MAE FDV V+GIDLS+NMIS A+ERAIGL   VEF+ ADC  K YPD +FDVIY+RD +L
Sbjct: 300 MAEKFDVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTIL 359

Query: 61  HIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAY----- 115
           HI+DKP +FR+F+KWLKPGGK+LI+DYC+S  +PS EF+EYIK+ GY +HD++AY     
Sbjct: 360 HIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAEFSEYIKQRGYDLHDVQAYGQMLK 419

Query: 116 -------------EQFVKTLKQELEALENKKDDFICEFGK 142
                        +QF++ LK+EL+ +E +K+ FI +F K
Sbjct: 420 DAGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSK 459


>AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol
           methyltransferase | chr1:24134337-24135993 REVERSE
           LENGTH=348
          Length = 348

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 1   MAENFDVEVIGIDLSINMISLA--IERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDA 58
           +A  F  E IGI LS      A  +  A  L +   F  AD   + + D  FD++++ ++
Sbjct: 144 LASKFGAECIGITLSPVQAKRANDLAAAQSLAHKASFQVADALDQPFEDGKFDLVWSMES 203

Query: 59  MLHIKDKPTVFRSFYKWLKPGGKLLITDYCK---SAGSPSLE 97
             H+ DK    +   +   PGG+++I  +C    SAG  +L+
Sbjct: 204 GEHMPDKAKFVKELVRVAAPGGRIIIVTWCHRNLSAGEEALQ 245