Miyakogusa Predicted Gene

Lj2g3v3121040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3121040.1 tr|A9SXZ9|A9SXZ9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85491
,29.73,0.000000000007,HSP20-like chaperones,HSP20-like chaperone;
HSP20,Alpha crystallin/Hsp20 domain; PREDICTED: SIMILAR ,CUFF.39778.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin domai...   181   4e-46
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    51   9e-07

>AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin domain
           32.1 | chr1:1967308-1969414 REVERSE LENGTH=285
          Length = 285

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 40/272 (14%)

Query: 16  HFAPS--DEISTTHVLPLNCSGSMNSVLSRRDNKVYFARQASASFGYFMRQAS------- 66
           HF  +  D  ST  ++PLNCS S+N+V+ R DNK+ FARQAS+  G+FMR AS       
Sbjct: 18  HFPATSYDSASTASLVPLNCSSSLNTVIQRCDNKISFARQASSEQGFFMRPASPDDVLEN 77

Query: 67  ---------VKEGDSTTFIAPKIHGGKS----EGPSNSRA-PCFARPARTEPMTKVQGGD 112
                    V+ GD+  + A +    +     +  +N R  P  A  +     TK  G D
Sbjct: 78  LGMNLKNTVVRRGDNRLYFARQASSAQGFFMRQASTNERTIPHDAAASTKFSATKTTGFD 137

Query: 113 SSS--IEPPKFSRPSKQ-----------IGQRNQLNYKKNSCHPDTGTVWSPRMDVVESE 159
           SSS     P FS+P+K+             +R +L+  K +   + GTVWSPR +V ES 
Sbjct: 138 SSSPAYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLA---NLGTVWSPRSNVAEST 194

Query: 160 GKYVIAVEVPGSSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKREILHGP 219
             YV+A+E+PG+SINDIRVEVD+  L V GRR++   +V    K +S   YHK+EIL GP
Sbjct: 195 HSYVVAIELPGASINDIRVEVDNTNLTVTGRRTSICQKVDAGTK-ASILGYHKQEILQGP 253

Query: 220 YEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
           ++V W LP  VN DN+SAEF DG L+I++PK+
Sbjct: 254 FKVSWPLPSNVNKDNVSAEFMDGILRIVIPKL 285


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 139 NSCHPDTGTVWSPRMDVVESEGKYVIAVEVPGSSINDIRVEV-DDQKLCVKGRRSTSYLR 197
           +S   +T  + + R+D  E+   +V   ++PG    +++VE+ DD  L + G R      
Sbjct: 36  SSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERH----- 90

Query: 198 VAGCPKTSSFSSYHKREILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
                K     ++H+ E   G +   + LP  V MD + A   +G L + VPKV
Sbjct: 91  ---VEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKV 141