Miyakogusa Predicted Gene

Lj2g3v3110960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3110960.1 tr|G7K3F1|G7K3F1_MEDTR Citrate synthase
OS=Medicago truncatula GN=MTR_5g091930 PE=3
SV=1,88.87,0,Citrate_synt,Citrate synthase-like; SUBFAMILY NOT
NAMED,NULL; CITRATE SYNTHASE,Citrate synthase-like,CUFF.39763.1
         (512 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 | chr2:17803132...   844   0.0  
AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 | chr3:21724564...   838   0.0  
AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 | chr3:21721066...   701   0.0  
AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 | chr3:22192888...   117   1e-26
AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   115   5e-26
AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   115   6e-26

>AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 |
           chr2:17803132-17805991 REVERSE LENGTH=509
          Length = 509

 Score =  844 bits (2181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/507 (79%), Positives = 447/507 (88%), Gaps = 12/507 (2%)

Query: 13  RGRLAMLTAHLLPSSYTETTTDHVLPHRLSAQS----PPSTTLNGTLTIVDERTGKKYQV 68
           R RLA+L+ HL     +E   D     R    +     P  +L GTLTIVDERTGK Y+V
Sbjct: 8   RARLAVLSGHL-----SEGKQDSPAIERWCTSADTSVAPLGSLKGTLTIVDERTGKNYKV 62

Query: 69  EVSQDGTVRASDFKKISTGKNDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIE 128
            VS DGTV+A DFKKI TGK DKGLKLYDPGYLNTAPVRS+ISYIDGDEGILRYRGYPIE
Sbjct: 63  PVSDDGTVKAVDFKKIVTGKEDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPIE 122

Query: 129 ELAEKSTFVEVSYLIMYGSLPSESQLAEWNFAISQHSAVPQGVLDIIQSMPHDAHPMGVL 188
           E+AE STF+EV+YL+MYG+LPSESQL++W FA+SQHSAVPQGVLDIIQSMPHDAHPMGVL
Sbjct: 123 EMAENSTFLEVAYLLMYGNLPSESQLSDWEFAVSQHSAVPQGVLDIIQSMPHDAHPMGVL 182

Query: 189 VNALSALSVFHPDANPALRGLDIYNSKEVRDKQIARVIGKITTIAAAVYLRMAGRPPVLP 248
           V+A+SALS+FHPDANPALRG DIY+SK+VRDKQI R+IGK  TIAAA YLRMAGRPPVLP
Sbjct: 183 VSAMSALSIFHPDANPALRGQDIYDSKQVRDKQIIRIIGKAPTIAAAAYLRMAGRPPVLP 242

Query: 249 SNNLSYTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSAVRHLASSGVD 308
           S NL Y +NFLYMLDSLGNRSYKPNPRL R LDI+FILHAEHEMNCST+A RHLASSGVD
Sbjct: 243 SGNLPYADNFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVD 302

Query: 309 VYTAIAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKARKQKLSGFGHRVYK 368
           VYTA+AGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVK RK+K+SGFGHRVYK
Sbjct: 303 VYTAVAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKNRKRKMSGFGHRVYK 362

Query: 369 NYDPRAKVLRKLTEEVFSIVGRDPLIEIAVALEKIALSDEYFIKRKLYPNVDFYSGLIYR 428
           NYDPRAKV++ L +EVFSIVG+DPLIE+AVALEK ALSD+YF+KRKLYPNVDFYSGLIYR
Sbjct: 363 NYDPRAKVIKNLADEVFSIVGKDPLIEVAVALEKAALSDDYFVKRKLYPNVDFYSGLIYR 422

Query: 429 AMGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQVYVGEWLRHYTPINKRTVS 488
           AMGFPPE+FTVLFAIPRMAGYL+HWKESLDDPDTKIMRPQQVY G WLRHYTP+ +R V+
Sbjct: 423 AMGFPPEFFTVLFAIPRMAGYLSHWKESLDDPDTKIMRPQQVYTGVWLRHYTPVRERIVT 482

Query: 489 SD---ADKLGQVTTSNASKRRLAGSGM 512
            D   +DKLGQV TSNAS+RRLAGS +
Sbjct: 483 DDSKESDKLGQVATSNASRRRLAGSSV 509


>AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 |
           chr3:21724564-21727458 REVERSE LENGTH=514
          Length = 514

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/504 (78%), Positives = 445/504 (88%), Gaps = 6/504 (1%)

Query: 13  RGRLAMLTAHLLPSSYT--ETTTDHVLPHRLSAQ--SPPSTTLNGTLTIVDERTGKKYQV 68
           + RLA+LTAHL  S     E     + P   SA   + P  +L G LTIVDERTGKKYQV
Sbjct: 8   KARLAVLTAHLAVSDTVGLEQVLPAIAPWCTSAHITAAPHGSLKGNLTIVDERTGKKYQV 67

Query: 69  EVSQDGTVRASDFKKISTGKNDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIE 128
            VS+ GTV+A D KKI+TGK+DKGLKLYDPGYLNTAPVRS+I YIDGDEGILRYRGYPIE
Sbjct: 68  PVSEHGTVKAVDLKKITTGKDDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIE 127

Query: 129 ELAEKSTFVEVSYLIMYGSLPSESQLAEWNFAISQHSAVPQGVLDIIQSMPHDAHPMGVL 188
           ELAE STF+EV+YL+MYG+LPS+SQLA+W F +SQHSAVPQGVLDIIQSMPHDAHPMGVL
Sbjct: 128 ELAESSTFIEVAYLLMYGNLPSQSQLADWEFTVSQHSAVPQGVLDIIQSMPHDAHPMGVL 187

Query: 189 VNALSALSVFHPDANPALRGLDIYNSKEVRDKQIARVIGKITTIAAAVYLRMAGRPPVLP 248
           V+A+SALS+FHPDANPAL G DIY SK+VRDKQI R++GK  TIAAA YLR AGRPPVLP
Sbjct: 188 VSAMSALSIFHPDANPALSGQDIYKSKQVRDKQIVRILGKAPTIAAAAYLRTAGRPPVLP 247

Query: 249 SNNLSYTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSAVRHLASSGVD 308
           S NLSY+ENFLYMLDS+GNRSYKPNPRL R LDI+FILHAEHEMNCST+A RHLASSGVD
Sbjct: 248 SANLSYSENFLYMLDSMGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVD 307

Query: 309 VYTAIAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKARKQKLSGFGHRVYK 368
           VYTA AGAVGALYGPLHGGANEAVLKML+EIGT ENIP+FIEGVK RK+K+SGFGHRVYK
Sbjct: 308 VYTACAGAVGALYGPLHGGANEAVLKMLAEIGTAENIPDFIEGVKNRKRKMSGFGHRVYK 367

Query: 369 NYDPRAKVLRKLTEEVFSIVGRDPLIEIAVALEKIALSDEYFIKRKLYPNVDFYSGLIYR 428
           NYDPRAKV++KL +EVFSIVGRDPLIE+AVALEK ALSDEYF+KRKLYPNVDFYSGLIYR
Sbjct: 368 NYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYR 427

Query: 429 AMGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQVYVGEWLRHYTPINKRTVS 488
           AMGFPPE+FTVLFA+PRMAGYL+HW+ESLDDPDT+IMRPQQ Y G W+RHY P+ +RT+S
Sbjct: 428 AMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTRIMRPQQAYTGVWMRHYEPVRERTLS 487

Query: 489 SDA--DKLGQVTTSNASKRRLAGS 510
           SD+  DK GQV+ SNAS+RRLAGS
Sbjct: 488 SDSDKDKFGQVSISNASRRRLAGS 511


>AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 |
           chr3:21721066-21723726 REVERSE LENGTH=480
          Length = 480

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/483 (68%), Positives = 398/483 (82%), Gaps = 19/483 (3%)

Query: 12  ARGRLAMLTAHL--------LPSSYTETTTDHVLPHRLSAQSPPSTTLNGTLTIVDERTG 63
           AR RLA+L AHL        LP+     T+ H+        + P  +L G L IVDERTG
Sbjct: 7   ARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHI-------TAAPHGSLKGNLKIVDERTG 59

Query: 64  KKYQVEVSQDGTVRASDFKKISTGKNDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYR 123
            +YQV VS+ GTV+  D KKI+TGK+DKGL LYDPGYLNTAPVRS+ISYIDGDEGILRYR
Sbjct: 60  NEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYR 119

Query: 124 GYPIEELAEKSTFVEVSYLIMYGSLPSESQLAEWNFAISQHSAVPQGVLDIIQSMPHDAH 183
           GYP+EELAEKST+ EV+YL++YG+LPS+ QLA+W FAISQ+SAVPQGVLD+IQSMP+D H
Sbjct: 120 GYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVH 179

Query: 184 PMGVLVNALSALSVFHPDANPALRGLDIYNSKEVRDKQIARVIGKITTIAAAVYLRMAGR 243
           P+G LV A+SALS+F+PDANP+L GL +Y SK+VRDKQI RV+G+  TIAAA YLR AG+
Sbjct: 180 PVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGK 239

Query: 244 PPVLPSNNLSYTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSAVRHLA 303
           PPV P +NLSY+ENFLYM++S+G+RSYKPNPRL R LDI+FIL AEHEMNCST+A RHL+
Sbjct: 240 PPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLS 299

Query: 304 SSGVDVYTAIAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKARKQKLSGFG 363
           SSG DVYTA++G VGA+YGPLHGGA EA + MLSEIGTVENIPEFIE VK +K++LSGFG
Sbjct: 300 SSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFG 359

Query: 364 HRVYKNYDPRAKVLRKLTEEVFSIVGRDPLIEIAVALEKIALSDEYFIKRKLYPNVDFYS 423
           HR+YKNYDPR KV++KL +EVFSI+GRDPL+E+  ALEK ALSDEYF+KRKLYPNVDFYS
Sbjct: 360 HRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYS 419

Query: 424 GLIYRAMGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQVYVGEWLRHYTPIN 483
           GLI RAMG P  +     A+ R+AGYL+HW+ESLDDPDTKIMRPQQVY G  +RHY  + 
Sbjct: 420 GLINRAMGIPSSF----TAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVR 475

Query: 484 KRT 486
           +RT
Sbjct: 476 ERT 478


>AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 |
           chr3:22192888-22196246 FORWARD LENGTH=464
          Length = 464

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 188/401 (46%), Gaps = 50/401 (12%)

Query: 111 SYIDGDEGILRYRGYPIEEL---------AEKSTFVEVSYLIMYGSLPSESQLAEWNFAI 161
           S +D DEGI R+RG  I E           E+     + +L++ G +P++ Q    +  +
Sbjct: 87  SLLDADEGI-RFRGMSIPECQKILPSAESGEEPLPESLLWLLLTGKVPTKEQANALSTEL 145

Query: 162 SQHSAVPQGVLDIIQSMPHDAHPMGVLVNALSALSVFHPDANPALRGLDIYNSK--EVRD 219
           +  +AVP      I ++P  AHPM    + + AL V   +   A    DI  SK  E   
Sbjct: 146 AHRAAVPA-----IDALPSTAHPMTQFASGVMALQV-QSEFQKAYEQGDISKSKYWEPTF 199

Query: 220 KQIARVIGKITTIAAAVYLRMAGRPPVLP-SNNLSYTENFLYML--DSLGNRSYKPNPRL 276
           +    +I ++  +A+ VY RM     ++P  ++L Y  NF +ML  DS         P++
Sbjct: 200 EDALNLIARVPVVASYVYRRMYKDGSIIPLDDSLDYGANFSHMLGFDS---------PQM 250

Query: 277 TRALDIIFILHAEHEMNCSTSAVRHLASSGV-DVYTAIAGAVGALYGPLHGGANEAVL-- 333
              + +   +H++HE    ++   HL  S + D Y + A A+  L GPLHG AN+ VL  
Sbjct: 251 KELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLW 310

Query: 334 --KMLSEIG---TVENIPEFIEGVKARKQKLSGFGHRVYKNYDPRAKVLRKLTEEVFSIV 388
              ++ E G   + E + +++       + + G+GH V +  DPR    R   E     +
Sbjct: 311 IKLVVEECGESISKEQLKDYVWKTLNSGKVVPGYGHGVLRKTDPRYICQR---EFALKHL 367

Query: 389 GRDPLIEIAVALEKIA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PPEYFTVLFAIPR 445
             DPL ++   L ++   +  E    +  +PNVD +SG++    G     Y+TVLF + R
Sbjct: 368 PDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYGLTEARYYTVLFGVSR 427

Query: 446 MAGYLAH--WKESLDDPDTKIMRPQQVYVGEWLRHYTPINK 484
             G  +   W  +L  P   + RP+ V + +WL ++T +N+
Sbjct: 428 SLGICSQLIWDRALGLP---LERPKSVNM-DWLDNFTRLNR 464


>AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=473
          Length = 473

 Score =  115 bits (289), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 38/393 (9%)

Query: 111 SYIDGDEGILRYRGYPIEELAEKSTFVE---------VSYLIMYGSLPSESQLAEWNFAI 161
           S +D +EGI R+RG  I E  +     +         + +L++ G +PS+ Q+   +  +
Sbjct: 90  SLLDPEEGI-RFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPSKEQVEALSKDL 148

Query: 162 SQHSAVPQGVLDIIQSMPHDAHPMGVLVNALSALSVFHPDANPALRGLDIYNSKEVRDKQ 221
           +  +AVP  V + I ++P  AHPM    + + AL V          G+      E   + 
Sbjct: 149 ANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENGIHKSKFWEPTYED 208

Query: 222 IARVIGKITTIAAAVYLRMAGRPPVLPSN-NLSYTENFLYMLDSLGNRSYKPNPRLTRAL 280
              +I ++  +AA VY RM      +PS+ +L Y  NF +ML          + ++   +
Sbjct: 209 CLNLIARVPVVAAYVYRRMYKNGDSIPSDKSLDYGANFSHMLGF-------DDEKVKELM 261

Query: 281 DIIFILHAEHEMNCSTSAVRHLASSGV-DVYTAIAGAVGALYGPLHGGANEAVL----KM 335
            +   +H++HE    ++   HL  S + D Y + A A+  L GPLHG AN+ VL     +
Sbjct: 262 RLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 321

Query: 336 LSEIG---TVENIPEFIEGVKARKQKLSGFGHRVYKNYDPRAKVLRKLTEEVFSIVGRDP 392
           + E G   + E + E++       + + G+GH V +N DPR    R   E     +  DP
Sbjct: 322 VEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQR---EFALKHLPDDP 378

Query: 393 LIEIAVALEKIA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PPEYFTVLFAIPRMAGY 449
           L ++   L ++   +  E    +  +PNVD +SG++    G     Y+TVLF + R  G 
Sbjct: 379 LFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSLGI 438

Query: 450 LAH--WKESLDDPDTKIMRPQQVYVGEWLRHYT 480
            +   W  +L      + RP+ V + +WL  + 
Sbjct: 439 CSQLIWDRAL---GLALERPKSVTM-DWLEAHC 467


>AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=474
          Length = 474

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 38/393 (9%)

Query: 111 SYIDGDEGILRYRGYPIEELAEKSTFVE---------VSYLIMYGSLPSESQLAEWNFAI 161
           S +D +EGI R+RG  I E  +     +         + +L++ G +PS+ Q+   +  +
Sbjct: 91  SLLDPEEGI-RFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPSKEQVEALSKDL 149

Query: 162 SQHSAVPQGVLDIIQSMPHDAHPMGVLVNALSALSVFHPDANPALRGLDIYNSKEVRDKQ 221
           +  +AVP  V + I ++P  AHPM    + + AL V          G+      E   + 
Sbjct: 150 ANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENGIHKSKFWEPTYED 209

Query: 222 IARVIGKITTIAAAVYLRMAGRPPVLPSN-NLSYTENFLYMLDSLGNRSYKPNPRLTRAL 280
              +I ++  +AA VY RM      +PS+ +L Y  NF +ML          + ++   +
Sbjct: 210 CLNLIARVPVVAAYVYRRMYKNGDSIPSDKSLDYGANFSHMLGF-------DDEKVKELM 262

Query: 281 DIIFILHAEHEMNCSTSAVRHLASSGV-DVYTAIAGAVGALYGPLHGGANEAVL----KM 335
            +   +H++HE    ++   HL  S + D Y + A A+  L GPLHG AN+ VL     +
Sbjct: 263 RLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 322

Query: 336 LSEIG---TVENIPEFIEGVKARKQKLSGFGHRVYKNYDPRAKVLRKLTEEVFSIVGRDP 392
           + E G   + E + E++       + + G+GH V +N DPR    R   E     +  DP
Sbjct: 323 VEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQR---EFALKHLPDDP 379

Query: 393 LIEIAVALEKIA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PPEYFTVLFAIPRMAGY 449
           L ++   L ++   +  E    +  +PNVD +SG++    G     Y+TVLF + R  G 
Sbjct: 380 LFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSLGI 439

Query: 450 LAH--WKESLDDPDTKIMRPQQVYVGEWLRHYT 480
            +   W  +L      + RP+ V + +WL  + 
Sbjct: 440 CSQLIWDRAL---GLALERPKSVTM-DWLEAHC 468