Miyakogusa Predicted Gene

Lj2g3v3109520.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3109520.2 Non Chatacterized Hit- tr|E1ZC01|E1ZC01_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,26.85,7e-18,alpha/beta-Hydrolases,NULL; no description,NULL;
seg,NULL,CUFF.39756.2
         (348 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58800.1 | Symbols:  | unknown protein; Has 75 Blast hits to ...   374   e-104

>AT3G58800.1 | Symbols:  | unknown protein; Has 75 Blast hits to 75
           proteins in 23 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other
           Eukaryotes - 5 (source: NCBI BLink). |
           chr3:21748562-21749596 FORWARD LENGTH=344
          Length = 344

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 169/307 (55%), Positives = 236/307 (76%), Gaps = 1/307 (0%)

Query: 42  GEKPSLAYEVSEQKWSSFDSLVKLHPTREFRNGTDLIWQVPESPKGVMFLAHGCNGRSIN 101
           G+  S   ++ +Q  ++    ++  PT E +N T LIW +P SPK V+F+AHGC+ ++ +
Sbjct: 39  GKNQSTKMQLPKQISNNVKPELQSQPTLEIQNETQLIWTIPNSPKAVLFIAHGCHRKASD 98

Query: 102 FWDKSPECPNCIGLPEERLLVLHGLAQGFAVITISSARTCWSFGKEVLVVKDILEWWIGR 161
           FWDKS +CP C GLPEER+L+   LA+ FAV+T+SS  TCW+FGKE  +V  I++ W+ +
Sbjct: 99  FWDKSSDCPQCTGLPEERILMRFALARKFAVLTVSSTGTCWTFGKEKTIVGSIIKSWVEK 158

Query: 162 RKLEKLPLVALGASSGGYFVSVLATAVKFNSIVIMIAEGMFEEMDVKEDYPPTLFVHMPK 221
            KLE+LPLVALGASSGGYFVS LAT ++F+SIV+MIAEG+F+++ + + YPPTLFVHMPK
Sbjct: 159 HKLERLPLVALGASSGGYFVSALATEMQFSSIVLMIAEGVFDQISISKQYPPTLFVHMPK 218

Query: 222 DLYRQQKIDEYVEVLKGKGIDVGVVECMEFPLSPNTLADRIPGLDLTLSRSLFEIFQGKG 281
           D+YRQQKI E++E L+ +GID   +EC++ P+SP+ LADRIPGLD  +S  LF++F+ KG
Sbjct: 219 DVYRQQKIREFLEGLRMEGIDAAEIECLDLPISPDFLADRIPGLDSDVSAKLFKLFRDKG 278

Query: 282 FVDQNGYMRKDGRRIKWEKAVEEKKTLSLDKRLVPHIQEELNLAFASHEMTSIHSDQIFK 341
           FVD+ GYM++DGRR  W++A+   K +SL++ L+  ++EELNLA+A HEMTS+ SDQIF 
Sbjct: 279 FVDEKGYMKRDGRRTPWKQALSGYK-ISLEQSLITPVEEELNLAYAYHEMTSLQSDQIFS 337

Query: 342 WFESHMG 348
           WFESHM 
Sbjct: 338 WFESHMS 344