Miyakogusa Predicted Gene
- Lj2g3v3106300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3106300.1 tr|B9HP52|B9HP52_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_557940 PE=4
SV=1,22.89,2e-18,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PGR3 (PROTON GRADIENT
REGULA,CUFF.39719.1
(528 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 614 e-176
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 419 e-117
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 355 6e-98
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 354 9e-98
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 9e-97
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 350 1e-96
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 346 2e-95
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 342 4e-94
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 336 3e-92
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 4e-92
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 328 5e-90
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 328 6e-90
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 325 6e-89
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 319 3e-87
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 4e-87
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 3e-86
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 1e-85
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 1e-84
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 310 2e-84
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 3e-84
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 307 2e-83
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 306 2e-83
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 306 3e-83
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 298 4e-81
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 4e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 298 6e-81
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 4e-80
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 295 4e-80
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 1e-77
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 6e-76
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 4e-75
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 278 8e-75
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 1e-74
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 275 4e-74
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 275 5e-74
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 275 7e-74
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 273 2e-73
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 272 4e-73
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 267 1e-71
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 7e-71
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 263 2e-70
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 261 9e-70
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 7e-69
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 257 1e-68
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 257 1e-68
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 248 5e-66
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 1e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 239 4e-63
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 234 1e-61
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 5e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 5e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 216 3e-56
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 8e-55
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 209 5e-54
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 3e-52
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 177 2e-44
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 8e-43
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 123 4e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 8e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 8e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 8e-27
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 3e-26
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 114 2e-25
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 107 2e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 3e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 102 8e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 100 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 98 1e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 1e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 87 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 82 7e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 79 1e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 3e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 2e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 68 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 1e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 2e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 4e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 1e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 614 bits (1584), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/507 (58%), Positives = 367/507 (72%), Gaps = 2/507 (0%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVF 75
+S L ++ C+TM++ +QIHA +IKTGL D + ASRVL FC +S D+NYAY+VF
Sbjct: 22 LSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVF 81
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE--VQPQKLTYPSVFKAYAQLGA 133
TR+ N + WNTIIRGFSRSS P+ AIS+F+DMLCS V+PQ+LTYPSVFKAY +LG
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
DG QLHG V+K GLE D FI NT++HMY G L EA R+F + DV+A NSMIMG
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
AKCG ID+++ LF+ M R V+WNSMISG+VRNGR K+AL++F MQE+ V+P FTM
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
VSLLNACA+LG+ + G W+H YI RN FELN IV+TA+IDMYCKCG IE + VFE P+
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ LSCWNS+I+GLA NG E A++ FS+L+ S L+PD VSFIGVLTAC H G + A +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F LM Y IEPSIKHYT MV VLG IK M + D W SLLS+CRK G
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
NVE+AKRAA+ + +LDP + GYVL+SN A+ FEEA+EQR+LMKE EKE GCSSI
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLN 520
E+ EVHEF++ G HPK+ EIYSLL+
Sbjct: 502 EVDFEVHEFISCGGTHPKSAEIYSLLD 528
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 313/513 (61%), Gaps = 20/513 (3%)
Query: 27 NHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS---GDINYAYMVFTRMPSPNL 83
N+C T++D QIHA IK+G D +AA+ +L FCA+S D++YA+ +F +MP N
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 84 YSWNTIIRGFSRSSTPQ--FAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQL 140
+SWNTIIRGFS S + AI+LF +M+ E V+P + T+PSV KA A+ G +G Q+
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVF--------------DEKVELDVIA 186
HG +K G D+F+ + ++ MY G + +A+ +F K + +++
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 187 CNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV 246
N MI G + G +R LF+ M R+ V+WN+MISGY NG K+A+EVF M++ +
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIE 306
P+ T+VS+L A + LGSL+ GEW+H Y + ++ ++ +A+IDMY KCG IE AI
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
VFER PR + W+++I G A++G +A++ F K++ + ++P V++I +LTAC H G
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLL 426
++E + YFS MV+ +EP I+HY CMV++LG+ I M I PD W +LL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 427 SSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK 486
+CR GNVE+ KR A + + P D+G YV +SN+ A+ + E E R+ MKE K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 487 EPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
+PGCS I++ G +HEF+ HPK +EI S+L
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 299/491 (60%), Gaps = 2/491 (0%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGD--INYAYMVFTRMPSPNLYSW 86
C+ ++ +QIHA ++KTGL D A ++ L+FC SS+ + YA +VF P+ + W
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
N +IRGFS S P+ ++ L+ MLCS T+PS+ KA + L A + Q+H ++ K
Sbjct: 84 NLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
LG E D + N++I+ YA +G A +FD E D ++ NS+I G K GK+D + L
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
F MA + A++W +MISGYV+ KEAL++F MQ VEP ++ + L+ACA LG+L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
+ G+W+HSY+ + ++ ++ +IDMY KCG +E A+EVF+ ++ + W ++I G
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
A +GH REA+ F ++Q +KP+ ++F VLTAC + G ++E K F M Y ++P+
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVC 446
I+HY C+V++LG+ I+ M + P+A WG+LL +CR H N+E+ + + +
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 447 QLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
+DP G YV +N+ A K+++A E R LMKE K PGCS+I L G HEFLAG
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 503
Query: 507 RLHPKTQEIYS 517
R HP+ ++I S
Sbjct: 504 RSHPEIEKIQS 514
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 300/505 (59%), Gaps = 5/505 (0%)
Query: 23 TMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCA-SSSGDINYAYMVFTRMPSP 81
++L++ C +M + +IH +I GL+ + S+ L+F A SSSGD++YAY +++ P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
Y WN +IRGFS S P+ +IS+++ ML + P +TYP + K+ ++L G LH
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
VVK GLE D FI NT+IHMY + + A+++FDE +++ NS++ AK G +
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVSLLNAC 260
+R +F+ M+ R VTW+SMI GYV+ G +ALE+F M G + +E TMVS++ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC-- 318
AHLG+L G+ VH YI + L VI+ T++IDMY KCGSI +A VF R +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
WN+II GLA +G RE+++ F K++ S + PD ++F+ +L AC H G + EA ++F +
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 379 NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+ EP +HY CMV+VL + I M I P S G+LL+ C HGN+E+A
Sbjct: 372 ES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 439 KRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGE 498
+ +K+ +L P + G YV ++NV A + +F A R M++ +K G S ++L G
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGT 490
Query: 499 VHEFLAGGRLHPKTQEIYSLLNDPG 523
H F+A + H + +IY++L G
Sbjct: 491 RHRFIAHDKTHFHSDKIYAVLQLTG 515
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 303/504 (60%), Gaps = 8/504 (1%)
Query: 19 QPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS------GDINYAY 72
P L +LQ+ C++ D + IH +++T L D ASR+L C S + YAY
Sbjct: 13 HPKLALLQS-CSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAY 71
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+F+++ +PNL+ +N +IR FS + P A + ML S + P +T+P + KA +++
Sbjct: 72 GIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G Q H ++V+ G + D ++ N+++HMYAN G ++ A R+F + DV++ SM+
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G KCG ++ +R +F+ M R TW+ MI+GY +N ++A+++F M+ EGV +E
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
MVS++++CAHLG+L+ GE + Y+ +++ +N+I+ TA++DM+ +CG IE AI VFE P
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
W+SII GLA++GH +A+ +FS++ S P V+F VL+AC H G +++
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+ M + IEP ++HY C+V++LG+ I M + P+A G+LL +C+ +
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
N E+A+R + ++ P +G YVL+SN+ A + ++++ R +MKE +K PG S
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 493 IELYGEVHEFLAG-GRLHPKTQEI 515
IE+ G++++F G + HP+ +I
Sbjct: 492 IEIDGKINKFTMGDDQKHPEMGKI 515
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 294/495 (59%), Gaps = 35/495 (7%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS--GDINYAYMVFTR 77
P L+ + ++ + QQ HA ++KTGL HD +AS+++ F A++ ++YA+ + R
Sbjct: 41 PILSFTE-RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNR 99
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
+ SPN ++ N++IR ++ SSTP+ A+++F +ML V P K ++ V KA A +G
Sbjct: 100 IGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSG------------------------------ 167
Q+HG +K GL D F+ NT++++Y SG
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 168 -LLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
L+ EA+ +FDE E +V + N MI G A G + E++ +F++M R V+WN+M++ Y
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 227 RNGRLKEALEVFSNMQEEGVE-PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
G E LEVF+ M ++ E P FT+VS+L+ACA LGSL GEWVH YI ++ E+
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 286 IVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS 345
+ TA++DMY KCG I+ A+EVF +R +S WNSII L+++G ++A+E FS++
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 346 NLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXX 405
KP+ ++FIGVL+AC H+G +D+A+ F +M + Y +EP+I+HY CMV++LG+
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 406 XXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAA 465
+ + + + SLL +C++ G +E A+R A ++ +L+ D+ GY MSN+ A+
Sbjct: 460 AEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYAS 519
Query: 466 SNKFEEAMEQRILMK 480
++E+ ++ R M+
Sbjct: 520 DGRWEKVIDGRRNMR 534
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 354 bits (908), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 182/511 (35%), Positives = 299/511 (58%), Gaps = 6/511 (1%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
+T L+ H +K +Q H ++I TGL D++ ++ + C S++G + YAY VFT P P
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCP 76
Query: 82 NLYSWNTIIRGFSRSSTPQ---FAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGA 138
N Y NT+IR S P AI+++ + +P T+P V K ++ G
Sbjct: 77 NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGR 136
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCG 198
Q+HG+VV G + + +I MY + G L +A+++FDE + DV N+++ G K G
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVG 196
Query: 199 KIDESRRLFNNMA--ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
++DE+R L M R V+W +ISGY ++GR EA+EVF M E VEP E T++++
Sbjct: 197 EMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L+ACA LGSL+ GE + SY+ V + A+IDMY K G+I A++VFE R +
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
W +II GLA +GH EA+ F+++ + ++P+ V+FI +L+AC H+G +D K F+
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 377 MVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE 436
M + Y I P+I+HY CM+++LG+ IK M +A+ WGSLL++ H ++E
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 437 IAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELY 496
+ +RA ++ +L+P ++G Y+L++N+ + +++E+ R +MK +K G SSIE+
Sbjct: 437 LGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVE 496
Query: 497 GEVHEFLAGGRLHPKTQEIYSLLNDPGFAFQ 527
V++F++G HP+ + I+ +L + Q
Sbjct: 497 NRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 351 bits (900), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 295/517 (57%), Gaps = 13/517 (2%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINY 70
F+ ++ + + C+ + D Q+H+ I K+ D +I ++ V + S G++N
Sbjct: 148 FVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY--SKCGNVND 205
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A VF M N+ SWN++I F ++ A+ +F ML S V+P ++T SV A A
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 131 LGAGHDGAQLHGRVVKLG-LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS 189
L A G ++HGRVVK L D +SN + MYA + EA+ +FD +VIA S
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
MI G A +R +F MA R V+WN++I+GY +NG +EAL +F ++ E V P+
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF------ELNVIVLTAIIDMYCKCGSIEN 303
++ ++L ACA L L G H ++ ++ F E ++ V ++IDMY KCG +E
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
VF + R WN++IIG A NG+ EA+E F ++ S KPD ++ IGVL+AC H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
G ++E ++YFS M + + P HYTCMV++LG+ I+ M + PD+ WG
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 424 SLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENF 483
SLL++C+ H N+ + K A+K+ +++P ++G YVL+SN+ A K+E+ M R M++
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 484 TEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
K+PGCS I++ G H F+ + HP+ ++I+SLL+
Sbjct: 626 VTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 136/228 (59%)
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H V+K G + FI N +I Y+ G L + ++VFD+ + ++ NS++ GL K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+DE+ LF +M R TWNSM+SG+ ++ R +EAL F+ M +EG +E++ S+L+A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
C+ L + G VHS I ++ F +V + +A++DMY KCG++ +A VF+ R + W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
NS+I NG EA++ F + S ++PD V+ V++AC L AI
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 170/393 (43%), Gaps = 95/393 (24%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+HA +IK+G +++ +R++ S G + VF +MP N+Y+WN+++ G ++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLID-AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 98 TPQFAISLFVDM------------------------LCSEVQPQK-------LTYPSVFK 126
A SLF M LC K ++ SV
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIA 186
A + L + G Q+H + K D +I + ++ MY+ G +++A+RVFDE
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE-------- 212
Query: 187 CNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV 246
M R V+WNS+I+ + +NG EAL+VF M E V
Sbjct: 213 -----------------------MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV 249
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLT-AIIDMYCKCGSIENAI 305
EP E T+ S+++ACA L +++ G+ VH + +N+ N I+L+ A +DMY KC I+ A
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 306 EVFERNP-------------------------------RRGLSCWNSIIIGLAMNGHERE 334
+F+ P R + WN++I G NG E
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
A+ F L+ ++ P SF +L AC L +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 256 LLNAC--AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
LL++C + L ++ + +VH+ + ++ F + + +ID Y KCGS+E+ +VF++ P+
Sbjct: 25 LLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ 83
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
R + WNS++ GL G EA F + + D+ ++ +++ +EA Y
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 374 FSLM 377
F++M
Sbjct: 140 FAMM 143
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 291/487 (59%), Gaps = 2/487 (0%)
Query: 34 DFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGF 93
++++I+A II GL+ ++++ FC D++YA +F ++ +PN++ +N+IIR +
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIE-DMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 94 SRSSTPQFAISLFVDMLCSEVQ-PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ +S I ++ +L + P + T+P +FK+ A LG+ + G Q+HG + K G
Sbjct: 84 THNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFH 143
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
N +I MY L +A +VFDE E DVI+ NS++ G A+ G++ +++ LF+ M
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLD 203
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+T V+W +MISGY G EA++ F MQ G+EP E +++S+L +CA LGSL+ G+W+
Sbjct: 204 KTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWI 263
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H Y R F V A+I+MY KCG I AI++F + + + W+++I G A +G+
Sbjct: 264 HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNA 323
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
A+E F+++Q + +KP+ ++F+G+L+AC H+G E YF +M Y+IEP I+HY C
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC 383
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+++VL + K M + PD+ WGSLLSSCR GN+++A A + +L+P D
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPED 443
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
G YVL++N+ A K+E+ R +++ +K PG S IE+ V EF++G P
Sbjct: 444 MGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFW 503
Query: 513 QEIYSLL 519
EI +L
Sbjct: 504 TEISIVL 510
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 346 bits (887), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 287/487 (58%), Gaps = 2/487 (0%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q +H +K+ + D A+ L C S GD++ A VFT + ++ SWN++I GF +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANS-LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+P A+ LF M +V+ +T V A A++ G Q+ + + + + +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+N ++ MY G + +AKR+FD E D + +M+ G A + +R + N+M +
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQ-EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V WN++IS Y +NG+ EAL VF +Q ++ ++ ++ T+VS L+ACA +G+L+ G W+HS
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
YI+++ +N V +A+I MY KCG +E + EVF +R + W+++I GLAM+G E
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
AV+ F K+Q +N+KP+ V+F V AC H G +DEA+ F M + Y I P KHY C+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAG 454
+VLG+ I+ M I P S WG+LL +C+ H N+ +A+ A ++ +L+P + G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 455 GYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 514
+VL+SN+ A K+E E R M+ +KEPGCSSIE+ G +HEFL+G HP +++
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 515 IYSLLND 521
+Y L++
Sbjct: 630 VYGKLHE 636
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 191/387 (49%), Gaps = 65/387 (16%)
Query: 25 LQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS-GDINYAYMVFTRMPSPNL 83
L C +++ +Q H H+I+TG D +AS++ A SS + YA VF +P PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLC-SEVQPQKLTYPSVFKAYAQLGAGHDGAQLHG 142
++WNT+IR ++ P +I F+DM+ S+ P K T+P + KA A++ + G LHG
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 143 RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDE 202
VK + D F++N++IH Y + G L A +VF E DV++ NSMI G + G D
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD- 214
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
+ALE+F M+ E V+ S TMV +L+ACA
Sbjct: 215 ------------------------------KALELFKKMESEDVKASHVTMVGVLSACAK 244
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI----------------- 305
+ +L+ G V SYI N +N+ + A++DMY KCGSIE+A
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 306 --------------EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ-SSNLKPD 350
EV P++ + WN++I NG EA+ F +LQ N+K +
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLM 377
+++ + L+AC +GA++ ++ S +
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYI 391
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 279/509 (54%), Gaps = 4/509 (0%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTG-LAHDHIAASRVLTFCASSSGDINYAYMV 74
I P + +L + T K+ +QIHA + G L DH+ V S ++YA +
Sbjct: 4 IGKHPAIALLDSG-ITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQI 62
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCS--EVQPQKLTYPSVFKAYAQLG 132
R P L++ N++IR +S P+ + + +L S +++P T + +A L
Sbjct: 63 LDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR 122
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G Q+HG ++ G + D + +I +YA G L +VF+ D + +M+
Sbjct: 123 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVT 182
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
A+CG + +R+LF M R + WN+MISGY + G +EAL VF MQ EGV+ +
Sbjct: 183 ACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVA 242
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
M+S+L+AC LG+L G W HSYI RN ++ V + T ++D+Y KCG +E A+EVF
Sbjct: 243 MISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+ + W+S + GLAMNG + +E FS ++ + P+ V+F+ VL C +G +DE +
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+F M N + IEP ++HY C+V++ + I+ M + P A+ W SLL + R +
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
N+E+ A++K+ +L+ + G YVL+SN+ A SN ++ R MK K+PGCS
Sbjct: 423 KNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSV 482
Query: 493 IELYGEVHEFLAGGRLHPKTQEIYSLLND 521
+E+ GEVHEF G + HPK +I ++ D
Sbjct: 483 MEVNGEVHEFFVGDKSHPKYTQIDAVWKD 511
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 284/488 (58%), Gaps = 7/488 (1%)
Query: 36 QQIHAHIIKTGL---AHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRG 92
I H++K L +H H A+ + C GD+ A VF P +L SWN +I G
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASC----GDMENARKVFDESPVRDLVSWNCLING 231
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ + + AI ++ M V+P +T + + + LG + G + + V + GL
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+ N ++ M++ G + EA+R+FD + +++ +MI G A+CG +D SR+LF++M
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+ V WN+MI G V+ R ++AL +F MQ +P E TM+ L+AC+ LG+L G W+
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H YI + + LNV + T+++DMY KCG+I A+ VF R + +II GLA++G
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
A+ +F+++ + + PD ++FIG+L+AC H G I + YFS M + + + P +KHY+
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
MV++LG+ ++ M + DA+ WG+LL CR HGNVE+ ++AA+K+ +LDP D
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
+G YVL+ + +N +E+A R +M E EK PGCSSIE+ G V EF+ + P++
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 513 QEIYSLLN 520
++IY L+
Sbjct: 652 EKIYDRLH 659
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 219/459 (47%), Gaps = 69/459 (15%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCA-SSSGDINYAYM 73
F+ P L++L+ C + +QI A +I GL D A+SR++ FCA S S ++Y+
Sbjct: 50 FVLHNPLLSLLEK-CKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVK 108
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML---CSEVQPQKLTYPSVFKAYAQ 130
+ + +PN++SWN IRGFS S P+ + L+ ML C E +P TYP +FK A
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
L G + G V+KL LE + N IHM+A+ G + A++VFDE D+++ N
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN-- 226
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
+I+GY + G ++A+ V+ M+ EGV+P +
Sbjct: 227 -----------------------------CLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
TM+ L+++C+ LG L G+ + Y++ N + + ++ A++DM+ KCG I A +F+
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 311 NPRRGLSCWNSIIIGLAMNG-------------------------------HEREAVEFF 339
+R + W ++I G A G ++A+ F
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 340 SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
++Q+SN KPD ++ I L+AC LGA+D + + Y + ++ T +V++ +
Sbjct: 378 QEMQTSNTKPDEITMIHCLSACSQLGALD-VGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 400 XXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
G+ ++ T+ +++ HG+ A
Sbjct: 437 CGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 291/502 (57%), Gaps = 8/502 (1%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLA-HDHIAASRV-LTFCASSSGDINYAYMVFTRMP 79
L +L + ++ + QIHA I++ L H + L +S G I ++ +F +
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
P+L+ + I S + A L+V +L SE+ P + T+ S+ K+ + G
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKL 147
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H V+K GL D +++ ++ +YA G + A++VFD E +++ +MI AK G
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVSLLN 258
++ +R LF++M R V+WN MI GY ++G +AL +F + EG +P E T+V+ L+
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
AC+ +G+L+ G W+H +++ + LNV V T +IDMY KCGS+E A+ VF PR+ +
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQS-SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
WN++I G AM+G+ ++A+ F+++Q + L+P ++FIG L AC H G ++E F M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 378 VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
Y I+P I+HY C+V +LG+ IK M ++ D+ W S+L SC+ HG+ +
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 438 AKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYG 497
K A+ + L+ ++G YVL+SN+ A+ +E + R LMKE KEPG S+IE+
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 498 EVHEFLAGGRLHPKTQEIYSLL 519
+VHEF AG R H K++EIY++L
Sbjct: 508 KVHEFRAGDREHSKSKEIYTML 529
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 287/506 (56%), Gaps = 5/506 (0%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVF 75
+S + L + C + IHA II+T D ++ C S+ ++YAY VF
Sbjct: 26 LSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVC-STLDSVDYAYDVF 84
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
+ + +PN+Y + +I GF S +SL+ M+ + V P SV KA L
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA-CDLKVCR 143
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
++H +V+KLG + + ++ +Y SG L AK++FDE + D +A MI +
Sbjct: 144 ---EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
+CG I E+ LF ++ + V W +MI G VRN + +ALE+F MQ E V +EFT V
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+L+AC+ LG+L+ G WVHS++ EL+ V A+I+MY +CG I A VF +
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+ +N++I GLAM+G EA+ F + + +P++V+ + +L AC H G +D F+
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
M + +EP I+HY C+V++LG+ I+ + I PD G+LLS+C+ HGN+
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
E+ ++ A+++ + + D+G YVL+SN+ A+S K++E+ E R M+++ EKEPGCS+IE+
Sbjct: 441 ELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLLND 521
++HEFL G HP + IY L +
Sbjct: 501 DNQIHEFLVGDIAHPHKEAIYQRLQE 526
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 283/507 (55%), Gaps = 38/507 (7%)
Query: 25 LQNHCTTMKDFQQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNL 83
L +C ++ +QIHA ++ GL + + + + S G + YA+ +F +P P++
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
N ++RG ++S P+ +SL+ +M V P + T+ V KA ++L +G HG+
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLL-------------------------------SEA 172
VV+ G ++++ N +I +AN G L EA
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 173 KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLK 232
R+FDE D +A N MI G KC ++D +R LF+ + VTWN+MISGYV G K
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR-----NNFELNVIV 287
EAL +F M++ G P T++SLL+ACA LG L+ G+ +H YI ++ + +
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 288 LTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
A+IDMY KCGSI+ AIEVF R LS WN++I+GLA++ H ++E F ++Q +
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKV 376
Query: 348 KPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXX 407
P+ V+FIGV+ AC H G +DE + YFSLM + Y IEP+IKHY CMV++LG+
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 408 XXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASN 467
++ M I P+A W +LL +C+ +GNVE+ K A +K+ + ++G YVL+SN+ A++
Sbjct: 437 MFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTG 496
Query: 468 KFEEAMEQRILMKENFTEKEPGCSSIE 494
+++ + R + + +K G S IE
Sbjct: 497 QWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 335 bits (859), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 285/486 (58%), Gaps = 1/486 (0%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+++H H++K GL + + L S G ++ A VF R +++SWN +I G++R
Sbjct: 155 KKLHCHVVKFGLGSN-LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ +I L V+M + V P +T V A +++ ++H V + E +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N +++ YA G + A R+F DVI+ S++ G + G + +R F+ M R
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
++W MI GY+R G E+LE+F MQ G+ P EFTMVS+L ACAHLGSL+ GEW+ +Y
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
I +N + +V+V A+IDMY KCG E A +VF +R W ++++GLA NG +EA
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
++ F ++Q +++PD ++++GVL+AC H G +D+A+ +F+ M + + IEPS+ HY CMV+
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+LG+ ++ M +NP++ WG+LL + R H + +A+ AA+K+ +L+P +
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
Y L+ N+ A ++++ E R + + +K PG S IE+ G HEF+AG + H +++EI
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEI 633
Query: 516 YSLLND 521
Y L +
Sbjct: 634 YMKLEE 639
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 211/478 (44%), Gaps = 97/478 (20%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTF-CASSSGDINYAYMVFTRMPSPNLYSWN 87
C T F+Q+H+ I G+A + ++ F C+ G ++YAY +F ++P P++ WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD-GAQLHGRVVK 146
+I+G+S+ + L+++ML V P T+P + + G G +LH VVK
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
GL + ++ N ++ MY+ GL+ A+ VFD + + DV + N M
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM---------------- 207
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
ISGY R +E++E+ M+ V P+ T++ +L+AC+ +
Sbjct: 208 ---------------ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG- 325
+ VH Y+ E ++ + A+++ Y CG ++ A+ +F R + W SI+ G
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 326 -------------------------LAMNGHER-----EAVEFFSKLQSSNLKPDRVSFI 355
+ ++G+ R E++E F ++QS+ + PD + +
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 356 GVLTACKHLGA----------IDEAKYYFSLMVNAYEIEPSIK----------------- 388
VLTAC HLG+ ID+ K ++V I+ K
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 389 ---HYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
+T MV L GQ ++ M+I PD T+ +LS+C G V+ A++
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK 490
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
G + + +LF + V WN+MI G+ + E + ++ NM +EGV P T LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 258 NACAHLG-SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
N G +L G+ +H ++ + N+ V A++ MY CG ++ A VF+R + +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
WN +I G E++E +++ + + P V+ + VL+AC + D K
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 377 MVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE 436
V+ + EPS++ +V + M D +W S++ + GN++
Sbjct: 262 -VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLK 319
Query: 437 IAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAME 474
+A+ Q+ D + +M + + F E++E
Sbjct: 320 LARTYFD---QMPVRDRISWTIMIDGYLRAGCFNESLE 354
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 281/465 (60%), Gaps = 11/465 (2%)
Query: 68 INYAYMVF-TRMPSPNLYSWNTIIRGFSRS-STPQ--FAISLFVDMLCSEVQPQKLTYPS 123
I YA +F R + WN IIR + S+PQ IS+++ M V P T+P
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD 183
+ ++ G + H +++ GL+KD F+ ++++MY++ G L A+RVFD+ D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ- 242
+ A NS++ AK G ID++R+LF+ M R ++W+ +I+GYV G+ KEAL++F MQ
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 243 ----EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
E V P+EFTM ++L+AC LG+L+ G+WVH+YI + + E+++++ TA+IDMY KC
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 299 GSIENAIEVFER-NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS-NLKPDRVSFIG 356
GS+E A VF ++ + ++++I LAM G E + FS++ +S N+ P+ V+F+G
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVG 307
Query: 357 VLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN 416
+L AC H G I+E K YF +M+ + I PSI+HY CMV++ G+ I M +
Sbjct: 308 ILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 367
Query: 417 PDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQR 476
PD WGSLLS R G+++ + A +++ +LDP ++G YVL+SNV A + ++ E R
Sbjct: 368 PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIR 427
Query: 477 ILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
M+ K PGCS +E+ G VHEF+ G +++ IY++L++
Sbjct: 428 HEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDE 472
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 131/334 (39%), Gaps = 70/334 (20%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q+ HA I+ GL D + +L SS GD+ A VF S +L +WN+++ +++
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNM-YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 96 SSTPQFAISLFVDM----------------LCSE--------------------VQPQKL 119
+ A LF +M +C + V+P +
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 120 TYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE- 178
T +V A +LGA G +H + K +E D + +I MYA G L AKRVF+
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 179 KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVF 238
+ DV A ++MI LA G DE +LF+ M
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT-------------------------- 294
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE-WVHSYIRRNNFELNVIVLTAIIDMYCK 297
+ + P+ T V +L AC H G + G+ + I ++ ++D+Y +
Sbjct: 295 ----SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 298 CGSIENAIEVFERNPRR-GLSCWNSIIIGLAMNG 330
G I+ A P + W S++ G M G
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 290/500 (58%), Gaps = 34/500 (6%)
Query: 24 MLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGD--INYAYMVFTRMPSP 81
+L + C ++++ QI A+ IK+ + D ++++ FC S + ++YA +F M P
Sbjct: 34 LLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ +N++ RG+SR + P SLFV++L + P T+PS+ KA A A +G QLH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
+KLGL+ + ++ T+I+MY +C +D
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYT-------------------------------ECEDVD 181
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
+R +F+ + V +N+MI+GY R R EAL +F MQ + ++P+E T++S+L++CA
Sbjct: 182 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 241
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
LGSL G+W+H Y ++++F V V TA+IDM+ KCGS+++A+ +FE+ + W++
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAY 381
+I+ A +G +++ F +++S N++PD ++F+G+L AC H G ++E + YFS MV+ +
Sbjct: 302 MIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKF 361
Query: 382 EIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRA 441
I PSIKHY MV++L + I + I+P W LL++C H N+++A++
Sbjct: 362 GIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
Query: 442 AQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHE 501
++++ +LD G YV++SN+ A + K+E R +MK+ K PGCSSIE+ VHE
Sbjct: 422 SERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHE 481
Query: 502 FLAGGRLHPKTQEIYSLLND 521
F +G + T +++ L++
Sbjct: 482 FFSGDGVKSATTKLHRALDE 501
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 296/563 (52%), Gaps = 74/563 (13%)
Query: 25 LQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
L + T +QIHA ++ GL ++ L +SS GDI +A VF +P P ++
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITK-LIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
WN IIRG+SR++ Q A+ ++ +M + V P T+P + KA + L G +H +V
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 145 VKLGLEKDQFISNTIIHMY---------------------------------ANSGLLSE 171
+LG + D F+ N +I +Y A +G E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 172 AKRVFDEKVELDV-------------------------IACNSMIMGL------------ 194
A +F + ++DV I + + MGL
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 195 --AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
AKCG++ ++ LF+ M + + WN+MISGY +NG +EA+++F M + V P +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+ S ++ACA +GSL+ ++ Y+ R+++ +V + +A+IDM+ KCGS+E A VF+R
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
R + W+++I+G ++G REA+ + ++ + P+ V+F+G+L AC H G + E +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+F+ M + ++I P +HY C++++LG+ IK M + P + WG+LLS+C+KH
Sbjct: 446 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
+VE+ + AAQ++ +DP + G YV +SN+ AA+ ++ E R+ MKE K+ GCS
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 493 IELYGEVHEFLAGGRLHPKTQEI 515
+E+ G + F G + HP+ +EI
Sbjct: 565 VEVRGRLEAFRVGDKSHPRYEEI 587
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 285/534 (53%), Gaps = 35/534 (6%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP 79
P L + C+T K + A +IKT L D ++ +T C +S ++ A T+M
Sbjct: 774 PNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITAC-TSFKRLDLAVSTMTQMQ 832
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
PN++ +N + +GF S P ++ L+V ML V P TY S+ KA + A G
Sbjct: 833 EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGES 890
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIA------------- 186
L + K G I T+I Y+ +G + EA++VFDE E D IA
Sbjct: 891 LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLD 950
Query: 187 ------------------CNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRN 228
N +I G G ++++ LFN M + ++W +MI GY +N
Sbjct: 951 MDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQN 1010
Query: 229 GRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVL 288
R +EA+ VF M EEG+ P E TM ++++ACAHLG L+ G+ VH Y +N F L+V +
Sbjct: 1011 KRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG 1070
Query: 289 TAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
+A++DMY KCGS+E A+ VF P++ L CWNSII GLA +G +EA++ F+K++ ++K
Sbjct: 1071 SALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 349 PDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXX 408
P+ V+F+ V TAC H G +DE + + M++ Y I +++HY MV + +
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Query: 409 XIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNK 468
I M P+A WG+LL CR H N+ IA+ A K+ L+P ++G Y L+ ++ A N+
Sbjct: 1191 LIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNR 1250
Query: 469 FEEAMEQRILMKENFTEKE-PGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
+ + E R M+E EK PG SSI + H F A + H + E+ LL++
Sbjct: 1251 WRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDE 1304
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 286/570 (50%), Gaps = 79/570 (13%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHD-HIAASRV--LTFCASSSGDINYAYMVFTRMPSPNLYS 85
C + +Q+HA II+ L D HIA + L+ C + N A VF ++ PN++
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQT----NLAVRVFNQVQEPNVHL 84
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
N++IR +++S P A +F +M + TYP + KA + +H +
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 146 KLGLEKDQFISNTIIHMYA---------------------------------NSGLLSEA 172
KLGL D ++ N +I Y+ +G L +A
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 173 KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSM----------- 221
+R+FDE + D+I+ N+M+ G A+C ++ ++ LF M R V+W++M
Sbjct: 205 RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDME 264
Query: 222 ----------------------ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
I+GY G LKEA + M G++ ++S+L A
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA 324
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
C G L G +HS ++R+N N VL A++DMY KCG+++ A +VF P++ L W
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSW 384
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
N+++ GL ++GH +EA+E FS+++ ++PD+V+FI VL +C H G IDE YF M
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
Y++ P ++HY C+V++LG+ ++ M + P+ WG+LL +CR H V+IAK
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEV 499
+ +LDP D G Y L+SN+ AA+ +E + R MK EK G SS+EL +
Sbjct: 505 EVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGI 564
Query: 500 HEFLAGGRLHPKTQEIYSLLN------DPG 523
HEF + HPK+ +IY +L DPG
Sbjct: 565 HEFTVFDKSHPKSDQIYQMLGSLIEPPDPG 594
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 319 bits (817), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 285/513 (55%), Gaps = 51/513 (9%)
Query: 25 LQNHCTTMKDFQQIHAHIIKTGLAHDHIAA---SRVLTFCASSSGDINYAYMVFTRMPSP 81
L C+ M +Q+HA ++T + ++L +SS D+NYA+ VF + +
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENH 112
Query: 82 NLYSWNTIIRGFSRS-STPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+ + WNT+IR + S + A L+ ML E P K T+P V KA A + +G Q
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H ++VK G D +++N +IH+Y + CG
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGS-------------------------------CGC 201
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+D +R++F+ M R+ V+WNSMI VR G AL++F MQ EP +TM S+L+A
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSA 260
Query: 260 CAHLGSLQHGEWVHSYIRRN---NFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
CA LGSL G W H+++ R + ++V+V ++I+MYCKCGS+ A +VF+ +R L
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKL--QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
+ WN++I+G A +G EA+ FF ++ + N++P+ V+F+G+L AC H G +++ + YF
Sbjct: 321 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 380
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG- 433
+MV Y IEP+++HY C+V+++ + + M + PDA W SLL +C K G
Sbjct: 381 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
Query: 434 NVEIAKRAAQKVCQLDPGD-------AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK 486
+VE+++ A+ + + +G YVL+S V A+++++ + R LM E+ K
Sbjct: 441 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 500
Query: 487 EPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
EPGCSSIE+ G HEF AG HP+T++IY L
Sbjct: 501 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 318 bits (816), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 263/459 (57%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
+S G INYA VF M ++ +WNT+I + R A LF +M S V P ++
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
++ A + G ++ +++ + D + ++ MYA +G + A+ F +
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
++ +M+ G +KCG++D+++ +F+ + V W +MIS YV + +EAL VF M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
G++P +M S+++ACA+LG L +WVHS I N E + + A+I+MY KCG ++
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
+VFE+ PRR + W+S+I L+M+G +A+ F++++ N++P+ V+F+GVL C
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
H G ++E K F+ M + Y I P ++HY CMV++ G+ I+ M + + W
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
GSL+S+CR HG +E+ K AA+++ +L+P G VLMSN+ A ++E+ R +M+E
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEK 576
Query: 483 FTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
KE G S I+ G+ HEFL G + H ++ EIY+ L++
Sbjct: 577 NVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDE 615
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 207/411 (50%), Gaps = 14/411 (3%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP-NLYSWN 87
C ++ +Q+HAHI++T + H + + +SSS +++YA VF+ +PSP +N
Sbjct: 22 CKSLNHIKQLHAHILRTVINH-KLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFN 80
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
+R SRSS P+ I + + + + ++ + KA +++ A +G +LHG K+
Sbjct: 81 PFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKI 140
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
D F+ + MYA+ G ++ A+ VFDE DV+ N+MI + G +DE+ +LF
Sbjct: 141 ATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 208 NNMAARTA----VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
M + +++S R G ++ ++ + E V + +L+ A
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
G + + + R+ + N+ V TA++ Y KCG +++A +F++ ++ L CW ++I
Sbjct: 261 GCM---DMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM-VNAYE 382
+ + +EA+ F ++ S +KPD VS V++AC +LG +D+AK+ S + VN E
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
E SI + ++ + + + M + +W S++++ HG
Sbjct: 377 SELSINN--ALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 163/421 (38%), Gaps = 95/421 (22%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S G ++ A ++F + +L W T+I + S PQ A+ +F +M CS ++P ++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
SV A A LG +H + GLE + I+N +I+MYA G L + VF++
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 183 DVIACNSMI-----------------------------------MGLAKCGKIDESRRLF 207
+V++ +SMI G + G ++E +++F
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 208 NNMAARTAVT-----WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
+M +T + M+ + R L+EALEV +M V + SL++AC
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACRI 525
Query: 263 LGSLQHGEWVHSYIRR--NNFELNVIVLTAIIDMYCKCGSIENAIEVFERN---PRRGLS 317
G L+ G++ I + + +++++ I + + N V E +GLS
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 318 CWNS------IIIGLAMNGHEREAV----EFFSKLQSSNLKPDRVSFI------------ 355
+ +IG + E E SKL+ + PD S +
Sbjct: 586 RIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLV 645
Query: 356 -------------------------GVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
GV+ K+L ++ +F L+ YE E ++
Sbjct: 646 LWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDR 705
Query: 391 T 391
T
Sbjct: 706 T 706
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 272/526 (51%), Gaps = 38/526 (7%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
++ + +H+ II L + +++ AS D+ A VF +P N+ N +IR
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLK-DVASARKVFDEIPERNVIIINVMIR 113
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
+ + + +F M V+P T+P V KA + G G ++HG K+GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES-------- 203
F+ N ++ MY G LSEA+ V DE DV++ NS+++G A+ + D++
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 204 -----------------------------RRLFNNMAARTAVTWNSMISGYVRNGRLKEA 234
+ +F M ++ V+WN MI Y++N EA
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
+E++S M+ +G EP ++ S+L AC +L G+ +H YI R N+++ A+IDM
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 295 YCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
Y KCG +E A +VFE R + W ++I +G +AV FSKLQ S L PD ++F
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 355 IGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT 414
+ L AC H G ++E + F LM + Y+I P ++H CMV++LG+ I+ M+
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 415 INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAME 474
+ P+ WG+LL +CR H + +I AA K+ QL P +G YVL+SN+ A + ++EE
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTN 533
Query: 475 QRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
R +MK +K PG S++E+ +H FL G R HP++ EIY L+
Sbjct: 534 IRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 281/498 (56%), Gaps = 10/498 (2%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+ +Q+ + +I +GL+H H ++L FC +++YA +F R PN + + ++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 92 GFSRSSTP---QFAISLFVDMLCSEV-QPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
+S SS P A S F M+ V +P YP V K+ L + +H + K
Sbjct: 97 AYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 148 GLEKDQFISNTIIHMYANS-GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
G + ++H YA+S ++ A+++FDE E +V++ +M+ G A+ G I + L
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHLGS 265
F +M R +WN++++ +NG EA+ +F M E + P+E T+V +L+ACA G+
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
LQ + +H++ R + +V V +++D+Y KCG++E A VF+ ++ L+ WNS+I
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINC 335
Query: 326 LAMNGHEREAVEFFS---KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
A++G EA+ F KL +++KPD ++FIG+L AC H G + + + YF LM N +
Sbjct: 336 FALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFG 395
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAA 442
IEP I+HY C++++LG+ + M + D + WGSLL++C+ HG++++A+ A
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAV 455
Query: 443 QKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEF 502
+ + L+P + G +M+N+ +EEA R ++K K PG S IE+ EVH+F
Sbjct: 456 KNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQF 515
Query: 503 LAGGRLHPKTQEIYSLLN 520
+ + HP+T+EIY +L+
Sbjct: 516 YSLDKSHPETEEIYMILD 533
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 287/547 (52%), Gaps = 42/547 (7%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGD-INYAYMV 74
I+ CL++L N C ++ QIH IK G+ D +++ CA S D + YA +
Sbjct: 3 IAIHHCLSLL-NSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRL 61
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGA 133
P P+ + +NT++RG+S S P ++++FV+M+ V P ++ V KA +
Sbjct: 62 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS---- 189
G Q+H + +K GLE F+ T+I MY G + A++VFDE + +++A N+
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA 181
Query: 190 ---------------------------MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMI 222
M+ G K G+++ ++R+F+ M R V+W++MI
Sbjct: 182 CFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMI 241
Query: 223 SGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFE 282
G NG E+ F +Q G+ P+E ++ +L+AC+ GS + G+ +H ++ + +
Sbjct: 242 VGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS 301
Query: 283 LNVIVLTAIIDMYCKCGSIENAIEVFE-RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
V V A+IDMY +CG++ A VFE +R + W S+I GLAM+G EAV F++
Sbjct: 302 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 361
Query: 342 LQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXX 401
+ + + PD +SFI +L AC H G I+E + YFS M Y IEP I+HY CMV++ G+
Sbjct: 362 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 402 XXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSN 461
I M I P A W +LL +C HGN+E+A++ Q++ +LDP ++G VL+SN
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSN 481
Query: 462 VQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGR-------LHPKTQE 514
A + K+++ R M +K S +E+ +++F AG + H K +E
Sbjct: 482 AYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKE 541
Query: 515 IYSLLND 521
I L D
Sbjct: 542 IILRLKD 548
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/491 (34%), Positives = 273/491 (55%), Gaps = 8/491 (1%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+++H + +K GL D ++ ++ AS G I + VF MP ++ SWN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASL-GKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 96 SSTPQFAISLFVDMLC-SEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ + AI +F M S ++ + T S A + L G +++ R V E
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVR 183
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
I N ++ M+ G L +A+ VFD + +V SM+ G G+IDE+R LF +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V W +M++GYV+ R EALE+F MQ G+ P F +VSLL CA G+L+ G+W+H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
YI N ++ +V TA++DMY KCG IE A+EVF R + W S+I GLAMNG
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
A++ + ++++ ++ D ++F+ VLTAC H G + E + F M + ++P +H +C++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDAS---TWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
++L + I M D + + SLLS+ R +GNV+IA+R A+K+ +++
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRL--H 509
D+ + L+++V A++N++E+ R MK+ K PGCSSIE+ G HEF+ G L H
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Query: 510 PKTQEIYSLLN 520
PK EI S+L+
Sbjct: 544 PKMDEINSMLH 554
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 165/332 (49%), Gaps = 64/332 (19%)
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
M + + +P+L +N +++ + + ++LF ++ + P T P V K+ +L
Sbjct: 1 MNMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLR 60
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
+G ++HG VK GLE D ++SN+++ MYA+ G + +VFDE + DV+
Sbjct: 61 KVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVV------- 113
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEF 251
+WN +IS YV NGR ++A+ VF M QE ++ E
Sbjct: 114 ------------------------SWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T+VS L+AC+ L +L+ GE ++ ++ FE++V + A++DM+CKCG ++ A VF+
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 312 PRRGLSCWNSIIIGLA--------------------------MNGHER-----EAVEFFS 340
+ + CW S++ G MNG+ + EA+E F
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+Q++ ++PD + +LT C GA+++ K+
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 280/495 (56%), Gaps = 11/495 (2%)
Query: 33 KDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRG 92
K+ QQIH H++K G D + +++ + G + A+ VF + P ++ S+ +I+G
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN-GRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
++ + A LF ++ +V +++ ++ YA+ G + +L ++K + D
Sbjct: 210 YASRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 153 QFISNTIIHMYANSGLLSEAKRVF----DEKVELDVIACNSMIMGLAKCGKIDESRRLFN 208
+ T++ A SG + ++V D ++ N++I +KCG+++ + LF
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
+ + ++WN++I GY KEAL +F M G P++ TM+S+L ACAHLG++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 269 GEWVHSYI-RRNNFELNVIVL-TAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
G W+H YI +R N L T++IDMY KCG IE A +VF + LS WN++I G
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
AM+G + + FS+++ ++PD ++F+G+L+AC H G +D ++ F M Y++ P
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVC 446
++HY CM+++LG I M + PD W SLL +C+ HGNVE+ + A+ +
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 565
Query: 447 QLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
+++P + G YVL+SN+ A++ ++ E + R L+ + +K PGCSSIE+ VHEF+ G
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625
Query: 507 RLHPKTQEIYSLLND 521
+ HP+ +EIY +L +
Sbjct: 626 KFHPRNREIYGMLEE 640
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 217/359 (60%), Gaps = 3/359 (0%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSG--DINYAYM 73
I + P L++L N C T++ + IHA +IK GL + + A S+++ FC S + YA
Sbjct: 31 IRNHPSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAIS 89
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
VF + PNL WNT+ RG + SS P A+ L+V M+ + P T+P V K+ A+ A
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
+G Q+HG V+KLG + D ++ ++I MY +G L +A +VFD+ DV++ ++I G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
A G I+ +++LF+ + + V+WN+MISGY G KEALE+F +M + V P E TM
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
V++++ACA GS++ G VH +I + F N+ ++ A+ID+Y KCG +E A +FER P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+ + WN++I G +EA+ F ++ S P+ V+ + +L AC HLGAID ++
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 279/510 (54%), Gaps = 38/510 (7%)
Query: 19 QPCLTMLQNH-CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTF---CASSSGDINYAYMV 74
+ C+ +LQ + +++ +QIHA I+ G++ + L F S ++YA+ V
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 75 FTRMPSP-NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLG 132
F+++ P N++ WNT+IRG++ A SL+ +M S V+P TYP + KA +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G +H V++ G ++ N+++H+YAN
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN--------------------------- 168
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
CG + + ++F+ M + V WNS+I+G+ NG+ +EAL +++ M +G++P FT
Sbjct: 169 ----CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+VSLL+ACA +G+L G+ VH Y+ + N+ ++D+Y +CG +E A +F+
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN-LKPDRVSFIGVLTACKHLGAIDEAK 371
+ W S+I+GLA+NG +EA+E F ++S+ L P ++F+G+L AC H G + E
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 372 YYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRK 431
YF M Y+IEP I+H+ CMV++L + IK M + P+ W +LL +C
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 432 HGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
HG+ ++A+ A ++ QL+P +G YVL+SN+ A+ ++ + + R M + +K PG S
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Query: 492 SIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
+E+ VHEFL G + HP++ IY+ L +
Sbjct: 465 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 277/529 (52%), Gaps = 69/529 (13%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCA----------------------S 63
CT M D + +H I++ G+ D + ++ A S
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTS 174
Query: 64 SSGD-------------INYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML 110
+SGD I+ VF MP ++ S+NTII G+++S + A+ + +M
Sbjct: 175 NSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 111 CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLS 170
++++P T SV +++ G ++HG V++ G++ D +I ++++ MYA
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA------ 288
Query: 171 EAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGR 230
K +I++S R+F+ + R ++WNS+++GYV+NGR
Sbjct: 289 -------------------------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 231 LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTA 290
EAL +F M V+P S++ ACAHL +L G+ +H Y+ R F N+ + +A
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 291 IIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
++DMY KCG+I+ A ++F+R W +II+G A++GH EAV F +++ +KP+
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
+V+F+ VLTAC H+G +DEA YF+ M Y + ++HY + ++LG+ I
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 411 KGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFE 470
M + P S W +LLSSC H N+E+A++ A+K+ +D + G YVLM N+ A++ +++
Sbjct: 504 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 471 EAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
E + R+ M++ K+P CS IE+ + H F++G R HP +I L
Sbjct: 564 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 179/345 (51%), Gaps = 15/345 (4%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+HA I+T + H +AS V++ ++ ++ A ++F + SP + +W ++IR F+
Sbjct: 25 KQLHAQFIRTQ-SLSHTSASIVISI-YTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
S A++ FV+M S P +PSV K+ + G +HG +V+LG++ D +
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 156 SNTIIHMYAN---SGLLSEAKRVFDEKVEL------DVIACNSMIMGLAKCGKIDESRRL 206
N +++MYA G VFDE + + + + IM ID RR+
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRV 198
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
F M + V++N++I+GY ++G ++AL + M ++P FT+ S+L + +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
G+ +H Y+ R + +V + ++++DMY K IE++ VF R R WNS++ G
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
NG EA+ F ++ ++ +KP V+F V+ AC HL + K
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 265/502 (52%), Gaps = 36/502 (7%)
Query: 17 SDQPCLTMLQNHCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
+D+ L CT K Q +HAHI+++ HD + + +L A G + A
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLEEARK 116
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
VF +MP + +W T+I G+S+ P A+ F ML P + T SV KA A
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G G QLHG VK G + + + + ++ +Y GL+ +A+ VFD
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA--------------- 221
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
+ +R V+WN++I+G+ R ++ALE+F M +G PS F+
Sbjct: 222 ----------------LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
SL AC+ G L+ G+WVH+Y+ ++ +L ++DMY K GSI +A ++F+R +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
R + WNS++ A +G +EAV +F +++ ++P+ +SF+ VLTAC H G +DE +Y
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+ LM I P HY +V++LG+ I+ M I P A+ W +LL++CR H
Sbjct: 386 YELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
N E+ AA+ V +LDP D G +V++ N+ A+ ++ +A R MKE+ +KEP CS +
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 494 ELYGEVHEFLAGGRLHPKTQEI 515
E+ +H F+A HP+ +EI
Sbjct: 505 EIENAIHMFVANDERHPQREEI 526
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 277/508 (54%), Gaps = 37/508 (7%)
Query: 18 DQPCLTMLQNHCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D + L + CT DF + IH++ IK GL + +++++ A G + V
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF-GRLRDCQKV 304
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F RM +L SWN+II+ + + P AISLF +M S +QP LT S+ +QLG
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 135 HDGAQLHGRVVKLG-LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
+ G ++ G +D I N ++ MYA
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYA----------------------------- 395
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFT 252
K G +D +R +FN + ++WN++ISGY +NG EA+E+++ M+EEG + ++ T
Sbjct: 396 --KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
VS+L AC+ G+L+ G +H + +N L+V V+T++ DMY KCG +E+A+ +F + P
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
R WN++I +GH +AV F ++ +KPD ++F+ +L+AC H G +DE ++
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
F +M Y I PS+KHY CMV++ G+ IK M++ PDAS WG+LLS+CR H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
GNV++ K A++ + +++P G +VL+SN+ A++ K+E E R + K PG SS
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693
Query: 493 IELYGEVHEFLAGGRLHPKTQEIYSLLN 520
+E+ +V F G + HP +E+Y L
Sbjct: 694 MEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 42/345 (12%)
Query: 25 LQNHCTTMKDFQQIHAH-IIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNL 83
L +CT ++ + +HA ++ + + I+A V +C G++ A F + + ++
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL--GNVALARHTFDHIQNRDV 117
Query: 84 YSWNTIIRGFSRSSTPQFAISLF-VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHG 142
Y+WN +I G+ R+ I F + ML S + P T+PSV KA + DG ++H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHC 174
Query: 143 RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDE 202
+K G D +++ ++IH+Y+ + +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYS-------------------------------RYKAVGN 203
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
+R LF+ M R +WN+MISGY ++G KEAL + + ++ T+VSLL+AC
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTE 259
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
G G +HSY ++ E + V +ID+Y + G + + +VF+R R L WNSI
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
I +N A+ F +++ S ++PD ++ I + + LG I
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 252/444 (56%), Gaps = 4/444 (0%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD--G 137
S SW + I +R+ A F DM + V+P +T+ ++ +G + G
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 138 AQLHGRVVKLGLEKDQFISNT-IIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
LHG KLGL+++ + T II MY+ G +A+ VFD + + + N+MI G +
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
G++D + ++F+ M R ++W +MI+G+V+ G +EAL F MQ GV+P +++
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
LNAC +LG+L G WVH Y+ +F+ NV V ++ID+YC+CG +E A +VF +R +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
WNS+I+G A NG+ E++ +F K+Q KPD V+F G LTAC H+G ++E YF +
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 377 MVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG-NV 435
M Y I P I+HY C+V++ + ++ M + P+ GSLL++C HG N+
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
+A+R + + L+ YV++SN+ AA K+E A + R MK +K+PG SSIE+
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLL 519
+H F+AG H +T I +L
Sbjct: 453 DDCMHVFMAGDNAHVETTYIREVL 476
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 21/297 (7%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H + K GL +H+ + S G A +VF M N +WNT+I G+ RS
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 98 TPQFAISLFVDMLCSEVQPQK--LTYPSVFKAYAQLGAGHDGAQLHGRVVKL-GLEKDQF 154
A +F M P++ +++ ++ + + G + A L R +++ G++ D
Sbjct: 155 QVDNAAKMFDKM------PERDLISWTAMINGFVKKGY-QEEALLWFREMQISGVKPDYV 207
Query: 155 ISNTIIHMYANSGLLSEA----KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
++ N G LS + V + + +V NS+I +CG ++ +R++F NM
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
RT V+WNS+I G+ NG E+L F MQE+G +P T L AC+H+G ++ G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG- 326
Query: 271 WVHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
+ I + ++ ++ + ++D+Y + G +E+A+++ + P + N ++IG
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKP----NEVVIG 379
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 39/216 (18%)
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL--GS 265
N + T V+W S I+ RNGRL EA + FS+M GVEP+ T ++LL+ C GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 266 LQHGEWVHSYIRRNNFELN-VIVLTAIIDMYCK--------------------------- 297
G+ +H Y + + N V+V TAII MY K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 298 ----CGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVS 353
G ++NA ++F++ P R L W ++I G G++ EA+ +F ++Q S +KPD V+
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 354 FIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
I L AC +LGA+ F L V+ Y + K+
Sbjct: 209 IIAALNACTNLGALS-----FGLWVHRYVLSQDFKN 239
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 252/453 (55%), Gaps = 36/453 (7%)
Query: 68 INYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA 127
+N A+ +F +MP N+ SW T+I +S+ Q A+ L V ML V+P TY SV ++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 128 YAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC 187
+ D LH ++K GLE D F+ + +I ++A
Sbjct: 172 CNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFA----------------------- 205
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
K G+ +++ +F+ M A+ WNS+I G+ +N R ALE+F M+ G
Sbjct: 206 --------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
+ T+ S+L AC L L+ G H +I + ++ ++I+ A++DMYCKCGS+E+A+ V
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
F + R + W+++I GLA NG+ +EA++ F +++SS KP+ ++ +GVL AC H G +
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLS 427
++ YYF M Y I+P +HY CM+++LG+ + M PDA TW +LL
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 428 SCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKE 487
+CR N+ +A+ AA+KV LDP DAG Y L+SN+ A S K++ E R M++ +KE
Sbjct: 436 ACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Query: 488 PGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
PGCS IE+ ++H F+ G HP+ E+ LN
Sbjct: 496 PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLN 528
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNT 88
C M D + +H IIK GL D S ++ A G+ A VF M + + WN+
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA-KLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 89 IIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG 148
II GF+++S A+ LF M + ++ T SV +A L G Q H +VK
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 149 LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFN 208
++D ++N ++ MY G L +A RVF++ E DVI ++MI GLA+
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ------------ 336
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
NG +EAL++F M+ G +P+ T+V +L AC+H G L+
Sbjct: 337 -------------------NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 269 GEWVHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENAIEVF 308
G W + + + ++ + +ID+ K G +++A+++
Sbjct: 378 G-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/208 (17%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 231 LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTA 290
L A++ ++Q G+ T L+ C ++ G + ++ N + ++
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 291 IIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
+I+MY K + +A ++F++ P+R + W ++I + ++A+E + N++P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
++ VL +C G D + ++ E + ++ + +++V +
Sbjct: 162 VYTYSSVLRSCN--GMSDVRMLHCGIIKEGLESDVFVR--SALIDVFAKLGEPEDALSVF 217
Query: 411 KGMTINPDASTWGSLLSSCRKHGNVEIA 438
M + DA W S++ ++ ++A
Sbjct: 218 DEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 253/444 (56%), Gaps = 4/444 (0%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
N+ SWN I+ GF+RS + A+ +F + P ++T SV + + G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G V+K GL KD+ + + +I MY SG + +F++ ++ CN+ I GL++ G +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 202 ESRRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
++ +F +T V+W S+I+G +NG+ EALE+F MQ GV+P+ T+ S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
AC ++ +L HG H + R + NV V +A+IDMY KCG I + VF P + L
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
CWNS++ G +M+G +E + F L + LKPD +SF +L+AC +G DE YF +M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 378 VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
Y I+P ++HY+CMV +LG+ IK M PD+ WG+LL+SCR NV++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 438 AKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYG 497
A+ AA+K+ L+P + G YVL+SN+ AA + E R M+ +K PGCS I++
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 498 EVHEFLAGGRLHPKTQEIYSLLND 521
V+ LAG + HP+ +I +++
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDE 659
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 191/388 (49%), Gaps = 42/388 (10%)
Query: 37 QIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q HA I+K+G +D +I+A + ++ S+ N A +V +P P +YS++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASY--SNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ +I +F M + P P++FK A+L A G Q+H GL+ D F+
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR-- 213
++ HMY G + +A++VFD + DV+ C++++ A+ G ++E R+ + M +
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 214 --TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
V+WN ++SG+ R+G KEA+ +F + G P + T+ S+L + L G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGS------------------------------- 300
+H Y+ + + V++A+IDMY K G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 301 IENAIEVF----ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIG 356
++ A+E+F E+ + W SII G A NG + EA+E F ++Q + +KP+ V+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 357 VLTACKHLGAIDEAKYYFSLMVNAYEIE 384
+L AC ++ A+ + V + ++
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLD 421
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%)
Query: 50 DHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDM 109
D++ L + G IN + +VF MP+ NL WN+++ GFS + +S+F +
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 110 LCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
+ + ++P +++ S+ A Q+G +G
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEG 508
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 272/478 (56%), Gaps = 4/478 (0%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
++ L +L H T + +IHAH+++ L ++ + ++ C S S +YA VF+
Sbjct: 4 ERKLLRLLHGHNTRTR-LPEIHAHLLRHFLHGSNLLLAHFISICGSLSNS-DYANRVFSH 61
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
+ +PN+ +N +I+ +S P ++S F M + + TY + K+ + L G
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
+HG +++ G + I ++ +Y + G + +A++VFDE E +V+ N MI G
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
G ++ LF M+ R+ V+WNSMIS + GR +EALE+F M ++G +P E T+V++L
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 258 NACAHLGSLQHGEWVHSYIRRNN-FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
A LG L G+W+HS + F+ + V A++D YCK G +E A +F + RR +
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 317 SCWNSIIIGLAMNGHEREAVEFF-SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
WN++I G A+NG ++ F + ++ + P+ +F+GVL C + G ++ + F
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
LM+ +++E +HY MV+++ + +K M +N +A+ WGSLLS+CR HG+V
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
++A+ AA ++ +++PG++G YVL+SN+ A ++++ + R LMK+N K G S+I
Sbjct: 422 KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 274/508 (53%), Gaps = 34/508 (6%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVF 75
++ Q +L+ + K ++IHA +++TG + + +++L GD+ YA VF
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI-GDMCYARQVF 66
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
M P ++ WNT+ +G+ R+ P ++ L+ M V+P + TYP V KA +QLG
Sbjct: 67 DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
G LH VVK G ++ ++ MY G LS A+
Sbjct: 127 CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEF--------------------- 165
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
LF +M + V WN+ ++ V+ G ALE F+ M + V+ FT+VS
Sbjct: 166 ----------LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVS 215
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+L+AC LGSL+ GE ++ R+ + N+IV A +DM+ KCG+ E A +FE +R
Sbjct: 216 MLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRN 275
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+ W+++I+G AMNG REA+ F+ +Q+ L+P+ V+F+GVL+AC H G ++E K YFS
Sbjct: 276 VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFS 335
Query: 376 LMV--NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
LMV N +EP +HY CMV++LG+ IK M + PD WG+LL +C H
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHR 395
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
++ + ++ A + + P +VL+SN+ AA+ K++ + R M++ T+K SS+
Sbjct: 396 DMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLND 521
E G++H F G + HP+++ IY L++
Sbjct: 456 EFEGKIHFFNRGDKSHPQSKAIYEKLDE 483
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 272/497 (54%), Gaps = 5/497 (1%)
Query: 29 CTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C ++D + +++A I +G+ + + S ++ + I+ A +F + NL
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDL 304
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
N + + R + A+ +F M+ S V+P +++ S + +QL G HG V+
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
+ G E I N +I MY A R+FD V+ NS++ G + G++D +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-EEGVEPSEFTMVSLLNACAHLG 264
F M + V+WN++ISG V+ +EA+EVF +MQ +EGV TM+S+ +AC HLG
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
+L +W++ YI +N +L+V + T ++DM+ +CG E+A+ +F R +S W + I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
+AM G+ A+E F + LKPD V+F+G LTAC H G + + K F M+ + +
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P HY CMV++LG+ I+ M + P+ W SLL++CR GNVE+A AA+K
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ L P G YVL+SNV A++ ++ + + R+ MKE K PG SSI++ G+ HEF +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 505 GGRLHPKTQEIYSLLND 521
G HP+ I ++L++
Sbjct: 725 GDESHPEMPNIEAMLDE 741
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 181/344 (52%), Gaps = 35/344 (10%)
Query: 28 HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCA--SSSGDINYAYMVFTRMPS-PNLY 84
+C T+ + + H + K GL +D ++++ + +++A VF S +
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
+N++IRG++ S AI LF+ M+ S + P K T+P A A+ A +G Q+HG +
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
VK+G KD F+ N+++H YA G L A++VFDE E +V+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV------------------- 201
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHL 263
+W SMI GY R K+A+++F M ++E V P+ TMV +++ACA L
Sbjct: 202 ------------SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
L+ GE V+++IR + E+N ++++A++DMY KC +I+ A +F+ L N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
G REA+ F+ + S ++PDR+S + +++C L I
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 273/493 (55%), Gaps = 8/493 (1%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
M +Q+HAH ++TG+ R+L ++ YA +F + + +N +I+
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
+ P +I L+ + ++P T+ +F A A + LH + + G E
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
D F T+I YA G L A+RVFDE + DV N+MI G + G + + LF++M
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE-GVEPSEFTMVSLLNACAHLGSLQHGE 270
+ +W ++ISG+ +NG EAL++F M+++ V+P+ T+VS+L ACA+LG L+ G
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPRRGLSCWNSIIIGLAMN 329
+ Y R N F N+ V A I+MY KCG I+ A +FE +R L WNS+I LA +
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G EA+ F+++ KPD V+F+G+L AC H G + + + F M ++I P ++H
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 390 YTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD 449
Y CM+++LG+ IK M + PDA WG+LL +C HGNVEIA+ A++ + +L+
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 450 PGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS-IELYGEVHEFLAGGRL 508
P + G V+MSN+ AA+ K++ + R LMK+ K G S +E+ +VH+F +
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 509 HPKTQEIYSLLND 521
HP++ EIY +L +
Sbjct: 476 HPRSYEIYQVLEE 488
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 272/497 (54%), Gaps = 5/497 (1%)
Query: 29 CTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C ++D + +++A I +G+ + + S ++ + I+ A +F + NL
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDL 304
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
N + + R + A+ +F M+ S V+P +++ S + +QL G HG V+
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
+ G E I N +I MY A R+FD V+ NS++ G + G++D +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-EEGVEPSEFTMVSLLNACAHLG 264
F M + V+WN++ISG V+ +EA+EVF +MQ +EGV TM+S+ +AC HLG
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
+L +W++ YI +N +L+V + T ++DM+ +CG E+A+ +F R +S W + I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
+AM G+ A+E F + LKPD V+F+G LTAC H G + + K F M+ + +
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P HY CMV++LG+ I+ M + P+ W SLL++CR GNVE+A AA+K
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ L P G YVL+SNV A++ ++ + + R+ MKE K PG SSI++ G+ HEF +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 505 GGRLHPKTQEIYSLLND 521
G HP+ I ++L++
Sbjct: 725 GDESHPEMPNIEAMLDE 741
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 181/344 (52%), Gaps = 35/344 (10%)
Query: 28 HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCA--SSSGDINYAYMVFTRMPS-PNLY 84
+C T+ + + H + K GL +D ++++ + +++A VF S +
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
+N++IRG++ S AI LF+ M+ S + P K T+P A A+ A +G Q+HG +
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
VK+G KD F+ N+++H YA G L A++VFDE E +V+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV------------------- 201
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHL 263
+W SMI GY R K+A+++F M ++E V P+ TMV +++ACA L
Sbjct: 202 ------------SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
L+ GE V+++IR + E+N ++++A++DMY KC +I+ A +F+ L N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
G REA+ F+ + S ++PDR+S + +++C L I
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 273/501 (54%), Gaps = 35/501 (6%)
Query: 24 MLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASS-SGDINYAYMVFTRMPS-P 81
MLQ C +MK ++IH+H+I GL H + +L FCA S +G +++A ++F S P
Sbjct: 11 MLQG-CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDP 69
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV-QPQKLTYPSVFKAYAQLGAGHDGAQL 140
+ WN +IRGFS SS+P +I + ML S V +P T+ K+ ++ + ++
Sbjct: 70 STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEI 129
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
HG V++ G D ++ +++ Y+ +G + A +V
Sbjct: 130 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKV------------------------- 164
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
F+ M R V+WN MI + G +AL ++ M EGV +T+V+LL++C
Sbjct: 165 ------FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSC 218
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
AH+ +L G +H E V V A+IDMY KCGS+ENAI VF +R + WN
Sbjct: 219 AHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWN 278
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
S+IIG ++GH EA+ FF K+ +S ++P+ ++F+G+L C H G + E +F +M +
Sbjct: 279 SMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
+ + P++KHY CMV++ G+ I + + D W +LL SC+ H N+E+ +
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV 398
Query: 441 AAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVH 500
A +K+ QL+ +AG YVLM+++ +A+N + R L++ + + PG S IE+ +VH
Sbjct: 399 AMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVH 458
Query: 501 EFLAGGRLHPKTQEIYSLLND 521
+F+ ++HP++ IYS L +
Sbjct: 459 KFVVDDKMHPESAVIYSELGE 479
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 263/487 (54%), Gaps = 32/487 (6%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
+H+ ++K G HD +AA L S SG +N A+ +F +P ++ +W + G++ S
Sbjct: 132 DLHSLVVKCGFNHD-VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
+ AI LF M+ V+P V A +G G + + ++ ++K+ F+
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
T++++YA KCGK++++R +F++M + V
Sbjct: 251 TTLVNLYA-------------------------------KCGKMEKARSVFDSMVEKDIV 279
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
TW++MI GY N KE +E+F M +E ++P +F++V L++CA LG+L GEW S I
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
R+ F N+ + A+IDMY KCG++ EVF+ + + N+ I GLA NGH + +
Sbjct: 340 DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSF 399
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
F + + + PD +F+G+L C H G I + +F+ + Y ++ +++HY CMV++
Sbjct: 400 AVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGY 456
G+ I M + P+A WG+LLS CR + ++A+ +++ L+P +AG Y
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNY 519
Query: 457 VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
V +SN+ + +++EA E R +M + +K PG S IEL G+VHEFLA + HP + +IY
Sbjct: 520 VQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIY 579
Query: 517 SLLNDPG 523
+ L D G
Sbjct: 580 AKLEDLG 586
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
S LF++ +NS+I+G+V N E L++F ++++ G+ FT +L AC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
S + G +HS + + F +V +T+++ +Y G + +A ++F+ P R + W ++
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
G +G REA++ F K+ +KPD + VL+AC H+G +D ++ M E
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEME 242
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLL 426
++ + T +V + + M + D TW +++
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 271/506 (53%), Gaps = 17/506 (3%)
Query: 18 DQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D+ L+ + C +K QI+ IK+ L+ D A+ + + A+ V
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA-LAEAFRV 439
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F M + SWN II ++ + LFV ML S ++P + T+ S+ KA G
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG 499
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+ G ++H +VK G+ + + ++I MY+ G++ EA+++ + ++
Sbjct: 500 Y-GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-------- 550
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
G ++E ++ N V+WNS+ISGYV + ++A +F+ M E G+ P +FT
Sbjct: 551 ---GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
++L+ CA+L S G+ +H+ + + + +V + + ++DMY KCG + ++ +FE++ RR
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
WN++I G A +G EA++ F ++ N+KP+ V+FI +L AC H+G ID+ YF
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH-G 433
+M Y ++P + HY+ MV++LG+ I+ M D W +LL C H
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
NVE+A+ A + +LDP D+ Y L+SNV A + +E+ + R M+ +KEPGCS +
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLL 519
EL E+H FL G + HP+ +EIY L
Sbjct: 848 ELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 203/413 (49%), Gaps = 33/413 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q HAH+I +G + +L ++S D A MVF +MP ++ SWN +I G+S+
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQ-VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA-----------GHDGAQLHGRV 144
S+ A S F M +V +++ S+ Y Q G G +G + GR
Sbjct: 127 SNDMFKANSFFNMMPVRDV----VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
+ L+ F+ +T + M + ++ RV + DV+A ++++ AK + ES
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVV----RV---GCDTDVVAASALLDMYAKGKRFVESL 235
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
R+F + + +V+W+++I+G V+N L AL+ F MQ+ S+ S+L +CA L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G +H++ +++F + IV TA +DMY KC ++++A +F+ + +N++I
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
G + H +A+ F +L SS L D +S GV AC + + E L + I+
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG-----LQIYGLAIK 410
Query: 385 PSIKHYTCM----VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
S+ C+ +++ G+ M DA +W +++++ ++G
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 2/274 (0%)
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
S P F S F D L + VFK A+ GA G Q H ++ G
Sbjct: 26 SYRRVPSF--SYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTT 83
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+ N ++ +Y NS A VFD+ DV++ N MI G +K + ++ FN M R
Sbjct: 84 FVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR 143
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V+WNSM+SGY++NG +++EVF +M EG+E T +L C+ L G +H
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ R + +V+ +A++DMY K ++ VF+ P + W++II G N
Sbjct: 204 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
A++FF ++Q N + + VL +C L +
Sbjct: 264 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 260/484 (53%), Gaps = 32/484 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
++IH + +++G + S L + G + A +F M N+ SWN++I + +
Sbjct: 256 KEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ P+ A+ +F ML V+P ++ A A LG G +H V+LGL+++ +
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N++I MY KC ++D + +F + +RT
Sbjct: 375 VNSLISMYC-------------------------------KCKEVDTAASMFGKLQSRTL 403
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+WN+MI G+ +NGR +AL FS M+ V+P FT VS++ A A L H +W+H
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ R+ + NV V TA++DMY KCG+I A +F+ R ++ WN++I G +G + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+E F ++Q +KP+ V+F+ V++AC H G ++ F +M Y IE S+ HY MV+
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+LG+ I M + P + +G++L +C+ H NV A++AA+++ +L+P D G
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
+VL++N+ A++ +E+ + R+ M K PGCS +E+ EVH F +G HP +++I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 516 YSLL 519
Y+ L
Sbjct: 704 YAFL 707
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 188/364 (51%), Gaps = 35/364 (9%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMV 74
+ + P +L+ C+++K+ +QI + K GL +H +++++ FC G ++ A V
Sbjct: 35 VYEHPAALLLE-RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARV 91
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F + S ++T+++GF++ S A+ FV M +V+P + + K
Sbjct: 92 FEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAEL 151
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G ++HG +VK G D F + +MYA
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYA------------------------------ 181
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
KC +++E+R++F+ M R V+WN++++GY +NG + ALE+ +M EE ++PS T+V
Sbjct: 182 -KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
S+L A + L + G+ +H Y R+ F+ V + TA++DMY KCGS+E A ++F+ R
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
+ WNS+I N + +EA+ F K+ +KP VS +G L AC LG ++ ++
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 375 SLMV 378
L V
Sbjct: 361 KLSV 364
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 38/289 (13%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
C + D ++ IH ++ GL + + S + +C +++ A +F ++ S L
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK--EVDTAASMFGKLQSRTLV 404
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
SWN +I GF+++ P A++ F M V+P TY SV A A+L H +HG V
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
++ L+K+ F++ ++ MYA G + A+ +FD
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM-------------------------- 498
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
M+ R TWN+MI GY +G K ALE+F MQ+ ++P+ T +S+++AC+H G
Sbjct: 499 -----MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 265 SLQHGEWVHSYIRRN-NFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
++ G ++ N + EL++ A++D+ + G + A + + P
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 259/484 (53%), Gaps = 19/484 (3%)
Query: 29 CTTMKDFQQIHAHIIKTG-----------LAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
C T+K Q HA I +G A+ A + + ++S ++YA VF
Sbjct: 14 CRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRF 73
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAIS-LFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
+ +P+ + +NTIIR + + FV+M V P T+P VFKA A G
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDL 133
Query: 137 G--AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
LH + ++ GL D F NT+I +Y+ + A ++FDE + DV+ N +I GL
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
K +I +R LF++M R V+WNS+ISGY + +EA+++F M G++P +V
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
S L+ACA G Q G+ +H Y +R ++ + T ++D Y KCG I+ A+E+FE +
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
L WN++I GLAM+G+ V++F K+ SS +KPD V+FI VL C H G +DEA+ F
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN----PDASTWGSLLSSCR 430
M + Y++ +KHY CM ++LG+ I+ M + W LL CR
Sbjct: 374 DQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCR 433
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQR-ILMKENFTEKEPG 489
HGN+EIA++AA +V L P D G Y +M + A + ++EE ++ R I+ ++ +K G
Sbjct: 434 IHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVG 493
Query: 490 CSSI 493
S +
Sbjct: 494 FSKV 497
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 271/500 (54%), Gaps = 5/500 (1%)
Query: 27 NHCTTMKDFQQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
+ C + +QIH H+++ GL +I + T YA V + N +
Sbjct: 57 DDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFL 116
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W +IRG++ AI+++ M E+ P T+ ++ KA + + G Q H +
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
+L ++ NT+I MY + A++VFDE E DVI+ +I A+ G ++ +
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
LF ++ + V W +M++G+ +N + +EALE F M++ G+ E T+ ++ACA LG+
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 266 LQHGEWVHSYIRRNNFELN--VIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
++ + +++ + + V++ +A+IDMY KCG++E A+ VF + + ++S+I
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 324 IGLAMNGHEREAVEFFSKLQS-SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
+GLA +G +EA+ F + + + +KP+ V+F+G L AC H G +D+ + F M +
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAA 442
++P+ HYTCMV++LG+ IK M++ P WG+LL +CR H N EIA+ AA
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 443 QKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS-SIELYGEVHE 501
+ + +L+P G Y+L+SNV A++ + + R L+KE +K P S ++ G++H+
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHK 536
Query: 502 FLAGGRLHPKTQEIYSLLND 521
F G HP + +I L +
Sbjct: 537 FFPGNLNHPMSNKIQDKLEE 556
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 275/507 (54%), Gaps = 36/507 (7%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASR-VLTFCASSSGD--INYAYMV 74
+Q CL +L+ C + +F+Q+HA IK L + ++ VL CA S + +NYA +
Sbjct: 30 EQECLYLLK-RCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F + P + +NT+IRG+ + + A+ + +M+ +P TYP + KA +L +
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+G Q+HG+V KLGLE D F+ NS+I
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQ-------------------------------NSLINMY 177
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTM 253
+CG+++ S +F + ++TA +W+SM+S G E L +F M E ++ E M
Sbjct: 178 GRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM 237
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
VS L ACA+ G+L G +H ++ RN ELN+IV T+++DMY KCG ++ A+ +F++ +
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
R ++++I GLA++G A+ FSK+ L+PD V ++ VL AC H G + E +
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F+ M+ ++EP+ +HY C+V++LG+ I+ + I + W + LS CR
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQ 417
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
N+E+ + AAQ++ +L + G Y+L+SN+ + +++ R + ++ PG S +
Sbjct: 418 NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLN 520
EL G+ H F++ R HPK +EIY +L+
Sbjct: 478 ELKGKTHRFVSQDRSHPKCKEIYKMLH 504
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 261/489 (53%), Gaps = 34/489 (6%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q HAHI+K GL D + +++ SSSG ++A +F ++ +W +I GF R+
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLIS-GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK-DQFI 155
+ A+ FV+M + V ++T SV KA ++ G +HG ++ G K D FI
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
++++ MY KC D+++++F+ M +R
Sbjct: 243 GSSLVDMYG-------------------------------KCSCYDDAQKVFDEMPSRNV 271
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
VTW ++I+GYV++ + + VF M + V P+E T+ S+L+ACAH+G+L G VH Y
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ +N+ E+N T +ID+Y KCG +E AI VFER + + W ++I G A +G+ R+A
Sbjct: 332 MIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDA 391
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+ F + SS++ P+ V+F+ VL+AC H G ++E + F M + +EP HY CMV+
Sbjct: 392 FDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVD 451
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+ G+ I+ M + P WG+L SC H + E+ K AA +V +L P +G
Sbjct: 452 LFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGR 511
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHP-KTQE 514
Y L++N+ + S ++E R MK+ K PG S IE+ G++ EF+A P ++ +
Sbjct: 512 YTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDD 571
Query: 515 IYSLLNDPG 523
+Y L+ G
Sbjct: 572 LYKTLDTVG 580
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 249/451 (55%), Gaps = 8/451 (1%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A F M ++ SWNTII G+++S A LF + +V T+ ++ Y Q
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQ 293
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+ +L ++ E+++ N ++ Y + AK +FD +V N+M
Sbjct: 294 NRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
I G A+CGKI E++ LF+ M R V+W +MI+GY ++G EAL +F M+ EG +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
+ S L+ CA + +L+ G+ +H + + +E V A++ MYCKCGSIE A ++F+
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ + WN++I G + +G A+ FF ++ LKPD + + VL+AC H G +D+
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
+ YF M Y + P+ +HY CMV++LG+ +K M PDA+ WG+LL + R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
HGN E+A+ AA K+ ++P ++G YVL+SN+ A+S ++ + + R+ M++ +K PG
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 491 SSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
S IE+ + H F G HP+ EI++ L +
Sbjct: 650 SWIEIQNKTHTFSVGDEFHPEKDEIFAFLEE 680
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 194/436 (44%), Gaps = 65/436 (14%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQK--LTYP 122
+G+ A +F MP +L SWN +I+G+ R+ A LF E+ P++ ++
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF------EIMPERDVCSWN 161
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA----------------NS 166
++ YAQ G D + R+ EK+ N ++ Y N
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 167 GLLS---------------EAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
L+S EA++ FD DV++ N++I G A+ GKIDE+R+LF+
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
+ TW +M+SGY++N ++EA E+F M E + ++ A L GE
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----------NEVSWNAMLAGYVQGER 327
Query: 272 VHSYIRRNNFEL----NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
+ + + F++ NV +I Y +CG I A +F++ P+R W ++I G +
Sbjct: 328 ME--MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN-AYEIEPS 386
+GH EA+ F +++ + +R SF L+ C + A++ K +V YE
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR--AAQK 444
+ + ++ + + K M D +W ++++ +HG E+A R + K
Sbjct: 446 VGN--ALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 445 VCQLDPGDAGGYVLMS 460
L P DA ++S
Sbjct: 503 REGLKPDDATMVAVLS 518
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G I+ A +F +MP + SW +I G+S+S A+ LFV M + + ++ S
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
A + A G QLHGR+VK G E F+ N ++ MY G + EA +F E D++
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
+ N+M I+GY R+G + AL F +M+ EG
Sbjct: 477 SWNTM-------------------------------IAGYSRHGFGEVALRFFESMKREG 505
Query: 246 VEPSEFTMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
++P + TMV++L+AC+H G + G ++ ++ + N ++D+ + G +E+A
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 305 IEVFERNP 312
+ + P
Sbjct: 566 HNLMKNMP 573
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 115 QPQKLTYPSVFKAYAQLGAGHDGAQLHG--RVVKLGLEKDQFIS------------NTII 160
+ Q+L Y S+ + H A H R + ++K Q N I
Sbjct: 12 RAQQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAI 71
Query: 161 HMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNS 220
Y +G +EA RVF ++ N MI G + G+ + +R+LF+ M R V+WN
Sbjct: 72 SSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNV 131
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
MI GYVRN L +A E+F M E V + ++L+ A G + V +
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMP--- 184
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFS 340
E N + A++ Y + +E A +F+ L WN ++ G EA +FF
Sbjct: 185 -EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
S N++ D VS+ ++T G IDEA+ F
Sbjct: 244 ---SMNVR-DVVSWNTIITGYAQSGKIDEARQLF 273
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/517 (31%), Positives = 274/517 (52%), Gaps = 64/517 (12%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
+G+I+ A VF MP N+ SW +++G+ + A SLF M + K+++ +
Sbjct: 92 NGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVM 147
Query: 125 FKAYAQLGAGHDGAQLH---------------------GRVVKLG------LEKDQFISN 157
+ Q G D +L+ GRV + E+
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 158 TIIHMYANSGLLSEAKRVFD---EKVELD----------------------------VIA 186
T++ Y + + +A+++FD EK E+ VIA
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 187 CNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV 246
CN+MI GL + G+I ++RR+F++M R +W ++I + RNG EAL++F MQ++GV
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIE 306
P+ T++S+L+ CA L SL HG+ VH+ + R F+++V V + ++ MY KCG + +
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ-SSNLKPDRVSFIGVLTACKHLG 365
+F+R P + + WNSII G A +G EA++ F ++ S + KP+ V+F+ L+AC + G
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 366 AIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSL 425
++E + M + + ++P HY CMV++LG+ I MT+ PDA+ WGSL
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 426 LSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTE 485
L +CR H +++A+ A+K+ +++P ++G Y+L+SN+ A+ ++ + E R LMK
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
Query: 486 KEPGCSSIELYGEVHEFLAGG-RLHPKTQEIYSLLND 521
K PGCS E+ +VH F GG HP+ + I +L++
Sbjct: 568 KSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDE 604
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N+++ Y + + +A+++FDE + ++I+ N ++ G K G+IDE+R++F+ M R V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+W +++ GYV NG++ A +F M E+ ++ L G + ++ I
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD----GRIDDACKLYEMI 167
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+ + I T++I CK G ++ A E+F+ R + W +++ G N +A
Sbjct: 168 P----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 337 EFFSKLQSSNLKPDR--VSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
+ F ++ P++ VS+ +L G I++A+ F +M ++P I M+
Sbjct: 224 KIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVIA-CNAMI 272
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
LGQ M DAS W +++ ++G
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERNDAS-WQTVIKIHERNG 310
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 150/349 (42%), Gaps = 51/349 (14%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQK--LT 120
S G I+ A +F S ++ SWN+++ G+ + P+ A LF +M P + ++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS 81
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
+ + Y + G + +V L E++ ++ Y ++G + A+ +F +
Sbjct: 82 WNGLVSGYMKNGEIDEAR----KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 181 ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSN 240
E + ++ M++G + G+ID++ +L+ + + + SMI G + GR+ EA E+F
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 241 MQEEGV---------------------------EPSEFTMVSLLNACAHLGSLQHGEWVH 273
M E V E +E + S+L G ++ E +
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL- 256
Query: 274 SYIRRNNFEL----NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
FE+ VI A+I + G I A VF+ R + W ++I N
Sbjct: 257 -------FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
G E EA++ F +Q ++P + I +L+ C L ++ K + +V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 26/256 (10%)
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
N I L++ GKI E+R+LF++ +++ +WNSM++GY N ++A ++F M + +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL----NVIVLTAIIDMYCKCGSIEN 303
S +VS G +++GE + R F+L NV+ TA++ Y G ++
Sbjct: 80 ISWNGLVS--------GYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
A +F + P + W ++IG +G +A + + + + R S I L CK
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD-NIARTSMIHGL--CKE 185
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
G +DEA+ F M E S+ +T MV GQ M + S W
Sbjct: 186 -GRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WT 238
Query: 424 SLLSSCRKHGNVEIAK 439
S+L ++G +E A+
Sbjct: 239 SMLMGYVQNGRIEDAE 254
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 258/492 (52%), Gaps = 36/492 (7%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+K QQ+HAH+I TG ++++T A S+ I Y +++F +P P+ + +N++I+
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITL-ACSARAIAYTHLLFLSVPLPDDFLFNSVIK 80
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
S+ P ++ + ML S V P T+ SV K+ A L A G +H V G
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
D ++ ++ Y+ KCG ++ +R++F+ M
Sbjct: 141 DTYVQAALVTFYS-------------------------------KCGDMEGARQVFDRMP 169
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
++ V WNS++SG+ +NG EA++VF M+E G EP T VSLL+ACA G++ G W
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VH YI +LNV + TA+I++Y +CG + A EVF++ ++ W ++I +G+
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 332 EREAVEFFSKLQSS-NLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
++AVE F+K++ P+ V+F+ VL+AC H G ++E + + M +Y + P ++H+
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH 349
Query: 391 TCMVEVLGQXXXXXXXXXXIKGMTINPDAST---WGSLLSSCRKHGNVEIAKRAAQKVCQ 447
CMV++LG+ I + A+ W ++L +C+ H N ++ A+++
Sbjct: 350 VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIA 409
Query: 448 LDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGR 507
L+P + G +V++SN+ A S K +E R M N K+ G S IE+ + + F G
Sbjct: 410 LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDE 469
Query: 508 LHPKTQEIYSLL 519
H +T EIY L
Sbjct: 470 SHQETGEIYRYL 481
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 251/447 (56%), Gaps = 9/447 (2%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A+ +F +P P+ +S+N ++ + R+ + A S F M + ++ ++ YA+
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA----SWNTMITGYAR 167
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
G +L + +EK++ N +I Y G L +A F V+A +M
Sbjct: 168 RGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM 223
Query: 191 IMGLAKCGKIDESRRLFNNMAA-RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
I G K K++ + +F +M + VTWN+MISGYV N R ++ L++F M EEG+ P+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
+ S L C+ L +LQ G +H + ++ +V LT++I MYCKCG + +A ++FE
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
++ + WN++I G A +G+ +A+ F ++ + ++PD ++F+ VL AC H G ++
Sbjct: 344 VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
YF MV Y++EP HYTCMV++LG+ I+ M P A+ +G+LL +C
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Query: 430 RKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
R H NVE+A+ AA+K+ QL+ +A GYV ++N+ A+ N++E+ R MKE+ K PG
Sbjct: 464 RVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPG 523
Query: 490 CSSIELYGEVHEFLAGGRLHPKTQEIY 516
S IE+ +VH F + R+HP+ I+
Sbjct: 524 YSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 159 IIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTW 218
+I + + + EA ++FDE E D + N M+ + ++++ F+ M + A +W
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW 158
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR 278
N+MI+GY R G +++A E+F +M E+ E S M+S C L H V + +R
Sbjct: 159 NTMITGYARRGEMEKARELFYSMMEKN-EVSWNAMISGYIECGDLEKASHFFKV-APVR- 215
Query: 279 NNFELNVIVLTAIIDMYCKCGSIENAIEVF-ERNPRRGLSCWNSIIIGLAMNGHEREAVE 337
V+ TA+I Y K +E A +F + + L WN++I G N + ++
Sbjct: 216 -----GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLK 270
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
F + ++P+ L C L A+ + + V+ + + T ++ +
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI-VSKSTLCNDVTALTSLISMY 329
Query: 398 GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+ + M D W +++S +HGN + A
Sbjct: 330 CKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 53/247 (21%)
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRN-GRLKEALEVFSNMQ 242
+ N +I + G ID + R+F+ M A+ +TWNS++ G ++ R+ EA ++F
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF---- 116
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
+E EP F+ +L+ Y+R NF E
Sbjct: 117 DEIPEPDTFSYNIMLSC---------------YVRNVNF--------------------E 141
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
A F+R P + + WN++I G A G +A E F + N VS+ +++
Sbjct: 142 KAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVSWNAMISGYI 197
Query: 363 HLGAIDEAKYYFSLMVNAYEIEP--SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAS 420
G +++A ++F ++ P + +T M+ + K MT+N +
Sbjct: 198 ECGDLEKASHFF-------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 421 TWGSLLS 427
TW +++S
Sbjct: 251 TWNAMIS 257
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+QIH + K+ L +D A + +++ +C G++ A+ +F M ++ +WN +I G++
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYC--KCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ A+ LF +M+ ++++P +T+ +V L H G
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVL-----LACNHAG----------------- 399
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
N G+ V D KVE M+ L + GK++E+ +L +M R
Sbjct: 400 --------LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 228/392 (58%), Gaps = 3/392 (0%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNT 88
C+ +QIH IIK L +D + ++++ +SS G+ YA +VF ++ SP+ ++WN
Sbjct: 30 CSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS-VSSSFGETQYASLVFNQLQSPSTFTWNL 88
Query: 89 IIRGFSRSSTPQFAISLFVDMLCS-EVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
+IR S + P+ A+ LF+ M+ S + Q K T+P V KA + G Q+HG +K
Sbjct: 89 MIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKA 148
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
G D F NT++ +Y G ++VFD+ +++ +M+ GL ++D + +F
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
N M R V+W +MI+ YV+N R EA ++F MQ + V+P+EFT+V+LL A LGSL
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS 268
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
G WVH Y +N F L+ + TA+IDMY KCGS+++A +VF+ + L+ WNS+I L
Sbjct: 269 MGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG 328
Query: 328 MNGHEREAVEFF-SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
++G EA+ F + ++++PD ++F+GVL+AC + G + + YF+ M+ Y I P
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPI 388
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD 418
+H CM+++L Q ++ M +PD
Sbjct: 389 REHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 240/445 (53%), Gaps = 7/445 (1%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
L ++N +I G+ Q A+ + M+ S ++ + TYPSV +A A G G Q+H
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 142 GRVVKLGLEKDQF---ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCG 198
V L ++ F N+++ +Y G EA+ +F++ D+++ N+++ G G
Sbjct: 310 AYV----LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 199 KIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN 258
I E++ +F M + ++W MISG NG +E L++FS M+ EG EP ++ +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
+CA LG+ +G+ H+ + + F+ ++ A+I MY KCG +E A +VF P
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
WN++I L +GH EAV+ + ++ ++PDR++ + VLTAC H G +D+ + YF M
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
Query: 379 NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
Y I P HY ++++L + I+ + P A W +LLS CR HGN+E+
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 439 KRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGE 498
AA K+ L P G Y+L+SN+ AA+ ++EE R LM++ +KE CS IE+ +
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 499 VHEFLAGGRLHPKTQEIYSLLNDPG 523
VH FL HP+ + +Y L D G
Sbjct: 666 VHTFLVDDTSHPEAEAVYIYLQDLG 690
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/568 (23%), Positives = 222/568 (39%), Gaps = 155/568 (27%)
Query: 50 DHIAASRVLT-FCASSSGDINYAYMVFTRMPS--PNLYSWNTIIRGFSRSSTPQFAISLF 106
D IA + +++ +CAS GDI A VF + P + +N +I GFS ++ AI+LF
Sbjct: 79 DKIARTTMVSGYCAS--GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 107 VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG-AQLHGRVVKLGLEKDQFISNTIIHMYA- 164
M +P T+ SV A + Q H +K G +SN ++ +Y+
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 165 ---NSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSM 221
+ LL A++VFDE +E + +W +M
Sbjct: 197 CASSPSLLHSARKVFDEILE-------------------------------KDERSWTTM 225
Query: 222 ISGYVRNGRL--------------------------------KEALEVFSNMQEEGVEPS 249
++GYV+NG +EALE+ M G+E
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYI-RRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
EFT S++ ACA G LQ G+ VH+Y+ RR +F + +++ +Y KCG + A +F
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD--NSLVSLYYKCGKFDEARAIF 343
Query: 309 ERNPRRGLSCWNSI-------------------------------IIGLAMNGHEREAVE 337
E+ P + L WN++ I GLA NG E ++
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN------------------ 379
FS ++ +P +F G + +C LGA + Y + ++
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 380 ----------AYEIEPSIK--HYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
+ P + + ++ LGQ + M I PD T +
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 425 LLSSCRKHGNVEIAKR---AAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKE 481
+L++C G V+ ++ + + V ++ PG A Y + ++ S KF +A E
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPG-ADHYARLIDLLCRSGKFSDA--------E 574
Query: 482 NFTEKEPGCSSIELYGEVHEFLAGGRLH 509
+ E P + E++ L+G R+H
Sbjct: 575 SVIESLPFKPTAEIW---EALLSGCRVH 599
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 64 SSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPS 123
SSG I A ++F M N+ SW +I G + + + + LF M +P +
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD 183
K+ A LGA +G Q H +++K+G + N +I MYA G++ EA++VF LD
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
++ N++I L + +G EA++V+ M +
Sbjct: 483 SVSWNALIAALGQ-------------------------------HGHGAEAVDVYEEMLK 511
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
+G+ P T++++L AC+H G + G ++ S +ID+ C+ G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 303 NAIEVFERNPRRGLS-CWNSIIIGLAMNGH 331
+A V E P + + W +++ G ++G+
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 39/271 (14%)
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+HG ++ G + I N +I +Y S L+ A+++FDE E D IA +M+ G G
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 200 IDESRRLFNN--MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
I +R +F + R V +N+MI+G+ N A+ +F M+ EG +P FT S+L
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 258 NACAHLGSLQ-HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS----IENAIEVFERNP 312
A + + H+ ++ V A++ +Y KC S + +A +VF+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 313 RRGLSCWNSIIIGLAMNGH--------------------------------EREAVEFFS 340
+ W +++ G NG+ +EA+E
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
++ SS ++ D ++ V+ AC G + K
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 266/489 (54%), Gaps = 32/489 (6%)
Query: 39 HAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSST 98
H II+ L D + VL S G + A VF M +L SWNT+I ++R+
Sbjct: 84 HGKIIRIDLEGD-VTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRM 142
Query: 99 PQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNT 158
A+ +F++M + + T SV A + +LH VK ++ + ++
Sbjct: 143 ESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 159 IIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTW 218
++ +YA KCG I ++ ++F +M +++VTW
Sbjct: 203 LLDLYA-------------------------------KCGMIKDAVQVFESMQDKSSVTW 231
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR 278
+SM++GYV+N +EAL ++ Q +E ++FT+ S++ AC++L +L G+ +H+ I +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 279 NNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEF 338
+ F NV V ++ +DMY KCGS+ + +F + L WN+II G A + +E +
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 339 FSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLG 398
F K+Q + P+ V+F +L+ C H G ++E + +F LM Y + P++ HY+CMV++LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 399 QXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVL 458
+ IK + +P AS WGSLL+SCR + N+E+A+ AA+K+ +L+P +AG +VL
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 459 MSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSL 518
+SN+ AA+ ++EE + R L+++ +K G S I++ +VH F G HP+ +EI S
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 519 LNDPGFAFQ 527
L++ F+
Sbjct: 532 LDNLVIKFR 540
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 159 IIHMYANSGLLSEAK----RVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
I+ + A +G + EAK ++ +E DV N +I +KCG ++ +R++F+ M R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V+WN+MI Y RN EAL++F M+ EG + SEFT+ S+L+AC + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ +LN+ V TA++D+Y KCG I++A++VFE + W+S++ G N + E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
A+ + + Q +L+ ++ + V+ AC +L A+ E K
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+++H +KT + + + +L A G I A VF M + +W++++ G+ +
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKC-GMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + A+ L+ ++ + T SV A + L A +G Q+H + K G + F+
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+++ + MYA G L E+ +F E E ++ N++I
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII------------------------ 336
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
SG+ ++ R KE + +F MQ++G+ P+E T SLL+ C H G ++ G
Sbjct: 337 -------SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 276 IRRN-NFELNVIVLTAIIDMYCKCGSIENAIEVFERNP-RRGLSCWNSII 323
+R NV+ + ++D+ + G + A E+ + P S W S++
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 253/455 (55%), Gaps = 40/455 (8%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G ++ A ++F M N+ +W T+I G+ +++ A LF EV P
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF------EVMP--------- 230
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
EK + +++ Y SG + +A+ F+ VI
Sbjct: 231 ------------------------EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI 266
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
ACN+MI+G + G+I ++RR+F+ M R TW MI Y R G EAL++F+ MQ++G
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
V PS +++S+L+ CA L SLQ+G VH+++ R F+ +V V + ++ MY KCG + A
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
VF+R + + WNSII G A +G EA++ F ++ SS P++V+ I +LTAC + G
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Query: 366 AIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSL 425
++E F M + + + P+++HY+C V++LG+ I+ MTI PDA+ WG+L
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 426 LSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTE 485
L +C+ H +++A+ AA+K+ + +P +AG YVL+S++ A+ +K+ + R M+ N
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVS 566
Query: 486 KEPGCSSIELYGEVHEFLAGG-RLHPKTQEIYSLL 519
K PGCS IE+ +VH F GG + HP+ I +L
Sbjct: 567 KFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 49/337 (14%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S G IN A F + + SWN+I+ G+ + P+ A LF +M V +++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV----VSWN 83
Query: 123 SVFKAYAQLGAGHDGAQLHGR-VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE 181
+ Y + + + R V +L E++ ++ Y G++ EA+ +F E
Sbjct: 84 GLVSGYIK-----NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+ ++ M GL G+ID++R+L++ M + V +MI G R GR+ EA +F M
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 242 QEEGV---------------------------EPSEFTMVSLLNACAHLGSLQHGEWVHS 274
+E V E +E + S+L G ++ E
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE---- 254
Query: 275 YIRRNNFEL----NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
FE+ VI A+I + + G I A VF+ R + W +I G
Sbjct: 255 ----EFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
E EA++ F+++Q ++P S I +L+ C L ++
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N+I+ Y ++GL EA+++FDE E +V++ N ++ G K I E+R +F M R V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+W +M+ GY++ G + EA +F M E +E + + G + ++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+V+ T +I C+ G ++ A +F+ R + W ++I G N A
Sbjct: 168 PVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
+ F + VS+ +L G I++A+ +F +M
Sbjct: 224 KLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
+ C+ I L++ GKI+E+R+ F+++ + +WNS++SGY NG KEA ++F M E
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL----NVIVLTAIIDMYCKCGS 300
V S +VS G +++ V + RN FEL NV+ TA++ Y + G
Sbjct: 78 NV-VSWNGLVS--------GYIKNRMIVEA---RNVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ A +F R P R W + GL +G +A + + + ++ + IG L
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS-TNMIGGL-- 182
Query: 361 CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAS 420
C+ G +DEA+ F M E ++ +T M+ Q + M + S
Sbjct: 183 CRE-GRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS 236
Query: 421 TWGSLLSSCRKHGNVEIAK 439
W S+L G +E A+
Sbjct: 237 -WTSMLLGYTLSGRIEDAE 254
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
G ++EA++ FD + + NS++ G G E+R+LF+ M+ R V+WN ++SGY+
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
+N + EA VF M E V + +++ G + E + + N +
Sbjct: 91 KNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV 146
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN 346
+ +ID G I+ A ++++ P + + ++I GL G EA F +++ N
Sbjct: 147 MFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 347 LKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI 383
+ V++ ++T + +D A+ F +M E+
Sbjct: 203 V----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEV 235
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 20 PCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFT 76
P L + + C T+ Q Q+HAH+++ D AS ++T G++ A +VF
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC-GELVKAKLVFD 390
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
R S ++ WN+II G++ + A+ +F +M S P K+T ++ A + G +
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
G ++ +E ++ T+ H +L A +V D+ +EL
Sbjct: 451 GLEIFE-----SMESKFCVTPTVEHYSCTVDMLGRAGQV-DKAMEL 490
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 262/488 (53%), Gaps = 49/488 (10%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
+ CL ++ C ++++ +QIHA II GL+H S++L SS+ ++YA + +
Sbjct: 9 NHRCLNLISK-CKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL--SSTVCLSYALSILRQ 65
Query: 78 MPSPNLYSWNTIIRGF---SRSSTPQFAISLFVDMLCSE---VQPQKLTYPSVFKAYAQL 131
+P+P+++ +NT+I S+ A SL+ +L S V+P + TYPS+FKA
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 132 GAGH-DGAQLHGRVVKL--GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
H G LH V+K + D+F+ ++ YAN
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYAN----------------------- 162
Query: 189 SMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRL---KEALEVFSNMQEEG 245
CGK+ E+R LF + TWN++++ Y + + +E L +F MQ
Sbjct: 163 --------CGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ--- 211
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
V P+E ++V+L+ +CA+LG G W H Y+ +NN LN V T++ID+Y KCG + A
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
+VF+ +R +SC+N++I GLA++G +E +E + L S L PD +F+ ++AC H G
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 366 AIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSL 425
+DE F+ M Y IEP ++HY C+V++LG+ IK M + P+A+ W S
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSF 391
Query: 426 LSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTE 485
L S + HG+ E + A + + L+ ++G YVL+SN+ A N++ + + R LMK++
Sbjct: 392 LGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVN 451
Query: 486 KEPGCSSI 493
K PG S++
Sbjct: 452 KSPGISTL 459
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 279/533 (52%), Gaps = 37/533 (6%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
D+ L + C + +HA I++ G+ +AA L C+S +Y+ +F
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQ--LVSCSSLLKSPDYSLSIFRN 85
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
N + N +IRG + ++ + ++ F+ ML V+P +LT+P V K+ ++LG G
Sbjct: 86 SEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE---KVELDVI--------- 185
LH +K ++ D F+ +++ MYA +G L A +VF+E +++ + I
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 186 -----------------------ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMI 222
+ +++I G G+++ +++LF M + V+W ++I
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 223 SGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFE 282
+G+ + G + A+ + M E+G++P+E+T+ ++L+AC+ G+L G +H YI N +
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 283 LNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL 342
L+ + TA++DMY KCG ++ A VF + + W ++I G A++G +A++ F ++
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Query: 343 QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXX 402
S KPD V F+ VLTAC + +D +F M Y IEP++KHY +V++LG+
Sbjct: 386 MYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 403 XXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNV 462
++ M INPD +TW +L +C+ H A+ +Q + +LDP G Y+ +
Sbjct: 446 LNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKT 505
Query: 463 QAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
A+ ++ ++R+ +++ E+ G S IEL G++++F AG H TQEI
Sbjct: 506 HASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 254/492 (51%), Gaps = 38/492 (7%)
Query: 35 FQQIHAHIIKTGLAHDHIAASRVLTFCASS--SGDINYAYMVFTRMPSPNLYSWNTIIRG 92
+QIHA +++T L + L+ A S DINY+ VF++ +P L NT+IR
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 93 FSRSSTPQFAISLFVDMLCSEVQP-QKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
FS S TP LF + + P L+ K + G G Q+HG++ G
Sbjct: 87 FSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
D + T++ +Y+ ++A +VFDE +
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDE-------------------------------IP 175
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE---GVEPSEFTMVSLLNACAHLGSLQH 268
R V+WN + S Y+RN R ++ L +F M+ + V+P T + L ACA+LG+L
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM 328
G+ VH +I N + + ++ MY +CGS++ A +VF R + W ++I GLAM
Sbjct: 236 GKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA-YEIEPSI 387
NG +EA+E F+++ + P+ + G+L+AC H G + E +F M + ++I+P++
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNL 355
Query: 388 KHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
HY C+V++LG+ IK M + PD++ W +LL +CR HG+VE+ +R + +
Sbjct: 356 HHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
Query: 448 LDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGR 507
L +AG YVL+ N + K+E+ E R LMKE +PGCS+IEL G VHEF+
Sbjct: 416 LKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDV 475
Query: 508 LHPKTQEIYSLL 519
HP+ +EIY +L
Sbjct: 476 SHPRKEEIYKML 487
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 276/515 (53%), Gaps = 18/515 (3%)
Query: 22 LTMLQNHC---TTMKDFQQIHAHIIKTGL--AHDHIAASRVLTFCASSSGDINYAYMVFT 76
+ +L HC + ++ +++HA + +GL A ++ + F ASS G++ A +F
Sbjct: 9 VRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASS-GEMVTAQKLFD 67
Query: 77 RMP--SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
+P + W T++ FSR ++ LFV+M V+ ++ +F A+L
Sbjct: 68 EIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDL 127
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
Q HG VK+G+ + N ++ MY GL+SE KR+F+E E V++ ++ +
Sbjct: 128 GFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF-TM 253
K ++ R +F+ M R AV W M++GY+ G +E LE+ + M F T+
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFEL-------NVIVLTAIIDMYCKCGSIENAIE 306
S+L+ACA G+L G WVH Y + + +V+V TA++DMY KCG+I++++
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
VF +R + WN++ GLAM+G R ++ F ++ +KPD ++F VL+AC H G
Sbjct: 308 VFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGI 366
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLL 426
+DE F + Y +EP + HY CMV++LG+ ++ M + P+ GSLL
Sbjct: 367 VDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLL 425
Query: 427 SSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK 486
SC HG VEIA+R +++ Q+ PG+ +LMSN+ A + + A R +++ K
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
Query: 487 EPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
PG SSI + VH F +G R HP+T+EIY LN+
Sbjct: 486 IPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNE 520
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 253/488 (51%), Gaps = 36/488 (7%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+HA+ IK L +D + ++ A + A VF + ++ +N +I G+SR
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDC-LTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 97 STP---QFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
T A+++F DM ++P LT+ S+ +A A L + Q+HG + K GL D
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F + +I +Y+N C + +SR +F+ M +
Sbjct: 490 FAGSALIDVYSN-------------------------------CYCLKDSRLVFDEMKVK 518
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V WNSM +GYV+ +EAL +F +Q P EFT +++ A +L S+Q G+ H
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ + E N + A++DMY KCGS E+A + F+ R + CWNS+I A +G +
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
+A++ K+ S ++P+ ++F+GVL+AC H G +++ F LM+ + IEP +HY CM
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCM 697
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
V +LG+ I+ M P A W SLLS C K GNVE+A+ AA+ DP D+
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 454 GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQ 513
G + ++SN+ A+ + EA + R MK KEPG S I + EVH FL+ + H K
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKAN 817
Query: 514 EIYSLLND 521
+IY +L+D
Sbjct: 818 QIYEVLDD 825
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 219/479 (45%), Gaps = 41/479 (8%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAY 72
+ D L+ + + C+ + + QIHAHI++ GL D + VL G + A+
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD-ASLMNVLIDSYVKCGRVIAAH 304
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+F MP+ N+ SW T++ G+ +++ + A+ LF M ++P S+ + A L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
A G Q+H +K L D +++N++I MYA L++A++VFD DV+ N+MI
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G ++ G W L EAL +F +M+ + PS T
Sbjct: 425 GYSRLG-----------------TQW-----------ELHEALNIFRDMRFRLIRPSLLT 456
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
VSLL A A L SL + +H + + L++ +A+ID+Y C ++++ VF+
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK- 371
+ L WNS+ G EA+ F +LQ S +PD +F ++TA +L ++ +
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 372 YYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRK 431
++ L+ E P I + ++++ + + D W S++SS
Sbjct: 577 FHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYAN 633
Query: 432 HGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAA---SNKFEEAMEQRILMKENFTEKE 487
HG + A + +K+ + G Y+ V +A + E+ ++Q LM E E
Sbjct: 634 HGEGKKALQMLEKM--MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 166/344 (48%), Gaps = 35/344 (10%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+ + ++K+G D + ++ F G+I+YA +VF +P + +W T+I G +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKD-GNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
++ LF ++ V P +V A + L G Q+H +++ GLE D +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N +I Y KCG++ + +LFN M + +
Sbjct: 288 NVLIDSYV-------------------------------KCGRVIAAHKLFNGMPNKNII 316
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+W +++SGY +N KEA+E+F++M + G++P + S+L +CA L +L G VH+Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE---R 333
+ N + V ++IDMY KC + +A +VF+ + +N++I G + G +
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
EA+ F ++ ++P ++F+ +L A L ++ +K LM
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 166/358 (46%), Gaps = 50/358 (13%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H II GL D S +L S +G + YA VF +MP NL SW+T++ +
Sbjct: 66 VHGQIIVWGLELD-TYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPS--VFKAYAQLGAGHDGA------QLHGRVVKLGL 149
+ ++ +F+ E + P+ + ++ Q +G DG QL +VK G
Sbjct: 125 IYEESLVVFL-----EFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
++D ++ +I Y G + A+ VFD E + +MI
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI------------------ 221
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
SG V+ GR +L++F + E+ V P + + ++L+AC+ L L+ G
Sbjct: 222 -------------SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
+ +H++I R E++ ++ +ID Y KCG + A ++F P + + W +++ G N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSI 387
+EA+E F+ + LKPD + +LT+C L A+ F V+AY I+ ++
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG-----FGTQVHAYTIKANL 381
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 40/299 (13%)
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+HG+++ GLE D ++SN +I++Y+ +G + A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYA--------------------------- 98
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLN 258
R++F M R V+W++M+S +G +E+L VF + P+E+ + S +
Sbjct: 99 ----RKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQ 154
Query: 259 ACAHLGSLQHGEW----VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
AC+ L G W + S++ ++ F+ +V V T +ID Y K G+I+ A VF+ P +
Sbjct: 155 ACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
W ++I G G +++ F +L N+ PD VL+AC L ++ K
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+ ++ Y +E +++ + GM N + +W +LLS +++
Sbjct: 273 AHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNA 329
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 258/456 (56%), Gaps = 6/456 (1%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSV 124
G ++ A F +M ++ +WN++I GF++ A+ +F ML S + P + T SV
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK--VEL 182
A A L G Q+H +V G + + N +I MY+ G + A+R+ +++ +L
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
+ +++ G K G +++++ +F ++ R V W +MI GY ++G EA+ +F +M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
G P+ +T+ ++L+ + L SL HG+ +H ++ +V V A+I MY K G+I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 303 NAIEVFE--RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+A F+ R R +S W S+II LA +GH EA+E F + L+PD ++++GV +A
Sbjct: 466 SASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 361 CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAS 420
C H G +++ + YF +M + +I P++ HY CMV++ G+ I+ M I PD
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 421 TWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMK 480
TWGSLLS+CR H N+++ K AA+++ L+P ++G Y ++N+ +A K+EEA + R MK
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 481 ENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
+ +KE G S IE+ +VH F HP+ EIY
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 190/410 (46%), Gaps = 35/410 (8%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S GD++ F ++P + SW T+I G+ AI + DM+ ++P + T
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+V + A G ++H +VKLGL + +SN++++MYA G AK VFD V
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
D+ + N+MI + G++D + F MA R VTWNSMISG+ + G AL++FS M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 243 EEG-VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+ + P FT+ S+L+ACA+L L G+ +HS+I F+++ IVL A+I MY +CG +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 302 ENAIEVFERNPRRGLS---------------------------------CWNSIIIGLAM 328
E A + E+ + L W ++I+G
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIK 388
+G EA+ F + +P+ + +L+ L ++ K V + EI S+
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-SVS 449
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
++ + + + D +W S++ + +HG+ E A
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 138/264 (52%), Gaps = 33/264 (12%)
Query: 134 GHDGAQL-HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G AQL H RV+K GL ++ N ++++Y+ +G A+++FDE + N+++
Sbjct: 29 GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
+K G +D + F+ + R +V+W +MI GY G+ +A+ V +M +EG+EP++FT
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS------------ 300
+ ++L + A ++ G+ VHS+I + NV V ++++MY KCG
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 301 -------------------IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
++ A+ FE+ R + WNS+I G G++ A++ FSK
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 342 -LQSSNLKPDRVSFIGVLTACKHL 364
L+ S L PDR + VL+AC +L
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANL 292
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 144/348 (41%), Gaps = 77/348 (22%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSS--------- 65
D+ L + + C ++ +QIH+HI+ TG I + +++ +
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 66 -----------------------GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFA 102
GD+N A +F + ++ +W +I G+ + + A
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 103 ISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHM 162
I+LF M+ +P T ++ + L + G Q+HG VK G +SN +I M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 163 YANSGLLSEAKRVFDE-KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSM 221
YA +G ++ A R FD + E D ++ SMI+ LA+
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ------------------------- 492
Query: 222 ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
+G +EALE+F M EG+ P T V + +AC H G + G ++
Sbjct: 493 ------HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK---- 542
Query: 282 ELNVIVLT-----AIIDMYCKCGSIENAIEVFERNP-RRGLSCWNSII 323
+++ I+ T ++D++ + G ++ A E E+ P + W S++
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 273/553 (49%), Gaps = 71/553 (12%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
++ ++ L L + C++++ F+QI +I L D + ++V+TF S+ +Y+ ++
Sbjct: 2 YLPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI 61
Query: 75 FTRMPSP-NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
+ S + +S+NT++ ++ P+ I + + + P T+P VFKA +
Sbjct: 62 LHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHM------------------------------- 162
+G Q+HG V K+G D ++ N+++H
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 163 YANSGLLSEAKRVF---DEKVELDVIAC-------------------------------- 187
+ +GL EA F D + L C
Sbjct: 182 FTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 188 -NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-EEG 245
N++I KC ++ ++ R+F + + V+WNSMISG V R KEA+++FS MQ G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
++P + S+L+ACA LG++ HG WVH YI + + + TAI+DMY KCG IE A+
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
E+F + + WN+++ GLA++GH E++ +F ++ KP+ V+F+ L AC H G
Sbjct: 362 EIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTG 421
Query: 366 AIDEAKYYFSLMVN-AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGS 424
+DE + YF M + Y + P ++HY CM+++L + +K M + PD G+
Sbjct: 422 LVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGA 481
Query: 425 LLSSCRKHGNV-EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENF 483
+LS+C+ G + E+ K ++ D+G YVL+SN+ AA+ ++++ R LMK
Sbjct: 482 ILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKG 541
Query: 484 TEKEPGCSSIELY 496
K PG S IE +
Sbjct: 542 ISKVPGSSYIEKF 554
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 267/512 (52%), Gaps = 38/512 (7%)
Query: 15 FISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFC-ASSSGDINY 70
F SD+ L+ + + C +++ +Q+H+ I++GL D + S V + S+ G ++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDD 323
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRS-STPQFAISLFVDMLCS-EVQPQKLTYPSVFKAY 128
VF RM ++ SW +I G+ ++ + AI+LF +M+ V+P T+ S FKA
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
L G Q+ G+ K GL + ++N++I M+ S
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD--------------------- 422
Query: 189 SMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
++++++R F +++ + V++N+ + G RN ++A ++ S + E +
Sbjct: 423 ----------RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
S FT SLL+ A++GS++ GE +HS + + N V A+I MY KCGSI+ A VF
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 309 ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
R + W S+I G A +G +E F+++ +KP+ V+++ +L+AC H+G +
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSS 428
E +F+ M ++I+P ++HY CMV++L + I M D W + L +
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 429 CRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEP 488
CR H N E+ K AA+K+ +LDP + Y+ +SN+ A + K+EE+ E R MKE KE
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 489 GCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
GCS IE+ ++H+F G HP +IY L+
Sbjct: 713 GCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 162/360 (45%), Gaps = 47/360 (13%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D + L C +DF + +HA +I+ + D + + +++ S SGD A V
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL-YSKSGDSAKAEDV 119
Query: 75 F---TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQL 131
F R ++ SW+ ++ + + AI +FV+ L + P Y +V +A +
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 132 GAGHDGAQLHGRVVKLG-LEKDQFISNTIIHMYANS-GLLSEAKRVFDEKVELDVIACNS 189
G G ++K G E D + ++I M+ A +VFD+ EL+V
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV----- 234
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
VTW MI+ ++ G +EA+ F +M G E
Sbjct: 235 --------------------------VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC---GSIENAIE 306
+FT+ S+ +ACA L +L G+ +HS+ R+ + V +++DMY KC GS+++ +
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRK 326
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGH-EREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHL 364
VF+R + W ++I G N + EA+ FS++ +++P+ +F AC +L
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 31/266 (11%)
Query: 102 AISLFVDMLCSEVQP-QKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTII 160
A+S M ++P +T+ S+ K+ + G +H R+++ +E D + N++I
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 161 HMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNS 220
+Y+ SG ++A+ VF E+ R F R V+W++
Sbjct: 105 SLYSKSGDSAKAEDVF-------------------------ETMRRF---GKRDVVSWSA 136
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI-RRN 279
M++ Y NGR +A++VF E G+ P+++ +++ AC++ + G ++ +
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 280 NFELNVIVLTAIIDMYCKC-GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEF 338
+FE +V V ++IDM+ K S ENA +VF++ + W +I G REA+ F
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 339 FSKLQSSNLKPDRVSFIGVLTACKHL 364
F + S + D+ + V +AC L
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAEL 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSE-FTMVSLLNACAHLGSLQHGEWVHSYIR 277
+ +I ++ G L+ A+ M +G+ P + T SLL +C + G+ VH+ +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFE---RNPRRGLSCWNSIIIGLAMNGHERE 334
+ E + ++ ++I +Y K G A +VFE R +R + W++++ NG E +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
A++ F + L P+ + V+ AC + + + ++ E + ++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
++ + + + TW +++ C + G
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 263/486 (54%), Gaps = 33/486 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H H IK D ++ ++ S + + A ++F R + +L +WN ++ G+++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALID-AYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
S + LF M + T +VFK L A + G Q+H +K G + D ++
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
S+ I+ MY KCG + ++ F+++
Sbjct: 555 SSGILDMYV-------------------------------KCGDMSAAQFAFDSIPVPDD 583
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V W +MISG + NG + A VFS M+ GV P EFT+ +L A + L +L+ G +H+
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ N + V T+++DMY KCGSI++A +F+R ++ WN++++GLA +G +E
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
++ F +++S +KPD+V+FIGVL+AC H G + EA + M Y I+P I+HY+C+ +
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
LG+ I+ M++ AS + +LL++CR G+ E KR A K+ +L+P D+
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
YVL+SN+ AA++K++E R +MK + +K+PG S IE+ ++H F+ R + +T+ I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 516 YSLLND 521
Y + D
Sbjct: 884 YRKVKD 889
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 194/440 (44%), Gaps = 69/440 (15%)
Query: 36 QQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
QQ+H +K GL ++ S + +C +A VF M +L SWN++I G +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRK--FGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD-GAQLHGRVVKLGLEKDQ 153
++ A+ LF+ +L ++P + T SV KA + L G Q+H +K+ D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+S +I Y+ + + EA+ +F E+ D++A
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILF-ERHNFDLVA--------------------------- 484
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
WN+M++GY ++ + L++F+ M ++G +FT+ ++ C L ++ G+ VH
Sbjct: 485 ----WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+Y ++ ++L++ V + I+DMY KCG + A F+ P W ++I G NG E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK---------------YYFSLMV 378
A FS+++ + PD + + A L A+++ + + + +V
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 379 NAYEIEPSIKHYTCM---VEVL---------------GQXXXXXXXXXXIKGMTINPDAS 420
+ Y SI C+ +E++ G+ +K + I PD
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 421 TWGSLLSSCRKHGNVEIAKR 440
T+ +LS+C G V A +
Sbjct: 721 TFIGVLSACSHSGLVSEAYK 740
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 153/345 (44%), Gaps = 43/345 (12%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS-----TPQFAISLFVDMLCSEVQPQ 117
S G + YA VF +MP +L SWN+I+ +++SS Q A LF + V
Sbjct: 85 SKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTS 144
Query: 118 KLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD 177
++T + K G HG K+GL+ D+F++ ++++Y G + E K +F+
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204
Query: 178 EKVELDVIACNSMIMGLAKCGKIDESRRL------------------------------- 206
E DV+ N M+ + G +E+ L
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQ 264
Query: 207 ---FNNMAARTAVT----WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
F N ++V+ N +S Y+ +G+ L+ F++M E VE + T + +L
Sbjct: 265 VKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
+ SL G+ VH + +L + V ++I+MYCK A VF+ R L W
Sbjct: 325 AVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
NS+I G+A NG E EAV F +L LKPD+ + VL A L
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 156/335 (46%), Gaps = 37/335 (11%)
Query: 106 FVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYAN 165
F DM+ S+V+ ++T+ + ++ + G Q+H +KLGL+ +SN++I+MY
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC- 361
Query: 166 SGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGY 225
K K +R +F+NM+ R ++WNS+I+G
Sbjct: 362 ------------------------------KLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG-SLQHGEWVHSYIRRNNFELN 284
+NG EA+ +F + G++P ++TM S+L A + L L + VH + + N +
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 285 VIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS 344
V TA+ID Y + ++ A +FER+ L WN+++ G + + ++ F+ +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 345 SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA-YEIEPSIKHYTCMVEVLGQXXXX 403
+ D + V C L AI++ K + + + Y+++ + + ++++ +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDM 568
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+ + PD W +++S C ++G E A
Sbjct: 569 SAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERA 602
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 175 VFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGR---- 230
F+E E +I N++I +KCG + +RR+F+ M R V+WNS+++ Y ++
Sbjct: 67 TFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVE 124
Query: 231 -LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLT 289
+++A +F ++++ V S T+ +L C H G + E H Y + + + V
Sbjct: 125 NIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 290 AIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
A++++Y K G ++ +FE P R + WN ++ G + EA++ S SS L P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 350 DRVSF 354
+ ++
Sbjct: 245 NEITL 249
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 273/509 (53%), Gaps = 8/509 (1%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTG-LAHDHIAASRVLTFCASSSGDINYAYMVFT 76
D+ L + + + +QIH HII +G L+ + + ++ F G+ A VF
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMEL-GNFGVAEKVFA 190
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
RMP P++ S+N +I G+++ A+ L+ M+ ++P + T S+ L
Sbjct: 191 RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRL 250
Query: 137 GAQLHGRVVKLG--LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G +HG + + G + +SN ++ MY AKR FD + D+ + N+M++G
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNG-RLKEALEVFSNMQ-EEGVEPSEFT 252
+ G ++ ++ +F+ M R V+WNS++ GY + G + E+F M E V+P T
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
MVSL++ A+ G L HG WVH + R + + + +A+IDMYCKCG IE A VF+
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+ ++ W S+I GLA +G+ ++A++ F ++Q + P+ V+ + VLTAC H G ++E +
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI-KGMTINPDASTWGSLLSSCRK 431
F+ M + + +P +HY +V++L + + K M + P S WGS+LS+CR
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 432 HGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
++E A+ A ++ +L+P GGYVL+SN+ A ++ + + R M+ +K G S
Sbjct: 551 GEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 492 SIELYGEVHEFLAGGRL-HPKTQEIYSLL 519
S+ +H F+A + HP+ EI +L
Sbjct: 611 SVVGVEGLHRFVAAEKQNHPRWTEIKRIL 639
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 201/451 (44%), Gaps = 77/451 (17%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCA-SSSGDINYAYMVFTRM-P 79
L +L+N C + F+Q+ A I++ L D SR++ F A + +++ A ++F P
Sbjct: 38 LVLLEN-CNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+PN++ +NT+I S S F L+ M+ V P + T+ + KA + L + Q
Sbjct: 97 NPNVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQTFLYLMKASSFLS---EVKQ 151
Query: 140 LHGRVVKLG-LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCG 198
+H ++ G L ++ N+++ Y G A++VF DV + N MI+G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG----- 206
Query: 199 KIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN 258
Y + G EAL+++ M +G+EP E+T++SLL
Sbjct: 207 --------------------------YAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 259 ACAHLGSLQHGEWVHSYIRRNN--FELNVIVLTAIIDMYCKC------------------ 298
C HL ++ G+ VH +I R + N+I+ A++DMY KC
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 299 -------------GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE--FFSKLQ 343
G +E A VF++ P+R L WNS++ G + G ++ V F+
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 344 SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
+KPDRV+ + +++ + G + ++ L++ +++ + ++++ +
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR-LQLKGDAFLSSALIDMYCKCGII 419
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
K T D + W S+++ HGN
Sbjct: 420 ERAFMVFKTAT-EKDVALWTSMITGLAFHGN 449
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 280/576 (48%), Gaps = 79/576 (13%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D + +LQ C+ + F +QIH ++++ GL +++ L S +G + + V
Sbjct: 89 DSTMVKLLQ-VCSNKEGFAEGRQIHGYVLRLGL-ESNVSMCNSLIVMYSRNGKLELSRKV 146
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F M NL SWN+I+ +++ AI L +M ++P +T+ S+ YA G
Sbjct: 147 FNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 135 HD-----------------------------------GAQLHGRVVKLGLEKDQFISNTI 159
D G +HG +++ L D ++ T+
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL 266
Query: 160 IHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TA 215
I MY +G L A+ VFD +++A NS++ GL+ + ++ L M A
Sbjct: 267 IDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 216 VTWNSMISGYV-----------------------------------RNGRLKEALEVFSN 240
+TWNS+ SGY +NG + AL+VF
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 241 MQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
MQEEGV P+ TM +LL L L G+ VH + R N + V TA++DMY K G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+++AIE+F + L+ WN +++G AM G E + FS + + ++PD ++F VL+
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 361 CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAS 420
CK+ G + E YF LM + Y I P+I+H +CMV++LG+ I+ M++ PDA+
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
Query: 421 TWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMK 480
WG+ LSSC+ H ++E+A+ A +++ L+P ++ Y++M N+ + N++E+ R LM+
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626
Query: 481 ENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
N + S I++ VH F A G+ HP +IY
Sbjct: 627 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 199/404 (49%), Gaps = 43/404 (10%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSG---DINYAYMVFTRMPSPNLYSWNTIIRGFS 94
IH +IK GL + + +RV++ G + +A +F MP + +WN I+
Sbjct: 9 IHGGLIKRGLDN---SDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
RS + A+ LF +M S + T + + + +G Q+HG V++LGLE +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA--- 211
+ N++I MY+ +G L +++VF+ + ++ + NS++ K G +D++ L + M
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 212 -ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
VTWNS++SGY G K+A+ V MQ G++PS ++ SLL A A G L+ G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
+H YI RN +V V T +IDMY K G + A VF+ + + WNS++ GL+
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
++A +++ +KPD +++ + + LG ++A
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA-------------------- 345
Query: 391 TCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
++V+G+ +K + P+ +W ++ S C K+GN
Sbjct: 346 ---LDVIGK----------MKEKGVAPNVVSWTAIFSGCSKNGN 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
LG HG I+R + V++A + Y +C S+ A ++F+ P+R WN I
Sbjct: 5 LGLTIHG----GLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
++ +G+ +AVE F ++Q S K + + +L C + E + ++
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LG 119
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE--IAKR 440
+E ++ ++ + + M + + S+W S+LSS K G V+ I
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 441 AAQKVCQLDP 450
++C L P
Sbjct: 179 DEMEICGLKP 188
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 265/512 (51%), Gaps = 41/512 (8%)
Query: 21 CLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASS-SGDINYAYMVFTRMP 79
CL L+ C+++K QIH I + L +D S ++ + S + D+ +A +
Sbjct: 16 CLIFLK-LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+WN + RG+S S +P +I ++ +M ++P KLT+P + KA A G Q
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+ V+K G + D ++ N +IH+Y C K
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGT-------------------------------CKK 163
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
++R++F+ M R V+WNS+++ V NG+L E F M + P E TMV LL+A
Sbjct: 164 TSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSA 223
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
C G+L G+ VHS + ELN + TA++DMY K G +E A VFER + + W
Sbjct: 224 CG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTW 281
Query: 320 NSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
+++I+GLA G EA++ FSK+ + S+++P+ V+F+GVL AC H G +D+ YF M
Sbjct: 282 SAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME 341
Query: 379 NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE-- 436
++I+P + HY MV++LG+ IK M PDA W +LLS+C H + +
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDE 401
Query: 437 -IAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
I ++ +++ +L+P +G V+++N A + + EA E R +MKE +K G S +EL
Sbjct: 402 GIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLEL 461
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLLNDPGFAFQ 527
G H F +G + IY LL+ F FQ
Sbjct: 462 GGSFHRFFSGYDPRSEYVSIYELLD--LFKFQ 491
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 259/511 (50%), Gaps = 45/511 (8%)
Query: 15 FISDQPCLTMLQNHCT-TMKDFQ--QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYA 71
F D T L C+ +M +Q Q+H+ I + G D ++ V+ A G + A
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF-GKMGCA 132
Query: 72 YMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQL 131
F MP + SW +I G+ R A LF M P V
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------------PHV------- 173
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
KD I N ++ + SG ++ A+R+FDE VI +MI
Sbjct: 174 -------------------KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMI 214
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-EEGVEPSE 250
G ID +R+LF+ M R V+WN+MI GY +N + +E + +F MQ ++P +
Sbjct: 215 HGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDD 274
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T++S+L A + G+L GEW H +++R + V V TAI+DMY KCG IE A +F+
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE 334
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
P + ++ WN++I G A+NG+ R A++ F + KPD ++ + V+TAC H G ++E
Sbjct: 335 MPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEG 393
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
+ +F +M + I+HY CMV++LG+ I M P+ S LS+C
Sbjct: 394 RKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACG 452
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
++ ++E A+R +K +L+P + G YVL+ N+ AA ++++ + +M++N +KE GC
Sbjct: 453 QYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGC 512
Query: 491 SSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
S IE+ V EF++G HP + I+ +L D
Sbjct: 513 SLIEINYIVSEFISGDTTHPHRRSIHLVLGD 543
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 200 IDESRRLFNNMAART-AVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVSLL 257
I +R+LF+ R + NSMI Y+ + ++ ++ ++++E P FT +L
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
+C+ + G +HS I R F ++ V T ++DMY K G + A F+ P R
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKL 342
W ++I G G A + F ++
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQM 170
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 262/501 (52%), Gaps = 40/501 (7%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C+++ D +Q H G D I S L S+ G + A VF +P N+ S
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSD-IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY------PSVFKAYAQLGAGHDGAQ 139
W ++IRG+ + A+SLF D+L E + SV A +++ A
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H V+K G ++ + NT++ YA G G
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGE-----------------------------GG 235
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLN 258
+ +R++F+ + + V++NS++S Y ++G EA EVF + + + V + T+ ++L
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
A +H G+L+ G+ +H + R E +VIV T+IIDMYCKCG +E A + F+R + +
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
W ++I G M+GH +A+E F + S ++P+ ++F+ VL AC H G E +F+ M
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 379 NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+ +EP ++HY CMV++LG+ I+ M + PD+ W SLL++CR H NVE+A
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Query: 439 KRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGE 498
+ + ++ +LD + G Y+L+S++ A + ++++ R++MK K PG S +EL GE
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Query: 499 VHEFLAGGRLHPKTQEIYSLL 519
VH FL G HP+ ++IY L
Sbjct: 536 VHVFLIGDEEHPQREKIYEFL 556
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 45/402 (11%)
Query: 74 VFTR-MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+F R + +++SWN++I +RS A+ F M + P + ++P KA + L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G Q H + G + D F+S+ +I MY+ G L +A++VFDE + ++++
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS------ 144
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM------QEEGV 246
W SMI GY NG +A+ +F ++ ++ +
Sbjct: 145 -------------------------WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC--GSIENA 304
+VS+++AC+ + + E +HS++ + F+ V V ++D Y K G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP-DRVSFIGVLTACKH 363
++F++ + +NSI+ A +G EA E F +L + + + ++ VL A H
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
GA+ K ++ +E + T ++++ + M N + +W
Sbjct: 300 SGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWT 357
Query: 424 SLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAA 465
++++ HG+ AK +D G Y+ +V AA
Sbjct: 358 AMIAGYGMHGHA--AKALELFPAMIDSGVRPNYITFVSVLAA 397
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 259/484 (53%), Gaps = 37/484 (7%)
Query: 37 QIHAHIIKTG-LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
QIH+ KTG +HD++ + + S G I +F P++ ++N +I G++
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLY--SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + ++SLF +++ S + + T S+ L + +HG +K
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLK--------- 347
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
SN + H ++ L + V+ +K +I+ +R+LF+ ++
Sbjct: 348 SNFLSHASVSTALTT----VY------------------SKLNEIESARKLFDESPEKSL 385
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
+WN+MISGY +NG ++A+ +F MQ+ P+ T+ +L+ACA LG+L G+WVH
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+R +FE ++ V TA+I MY KCGSI A +F+ ++ WN++I G ++G +EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+ F ++ +S + P V+F+ VL AC H G + E F+ M++ Y EPS+KHY CMV+
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+LG+ I+ M+I P +S W +LL +CR H + +A+ ++K+ +LDP + G
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
+VL+SN+ +A + +A R K+ K PG + IE+ H F +G + HP+ +EI
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 516 YSLL 519
Y L
Sbjct: 686 YEKL 689
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 202/477 (42%), Gaps = 78/477 (16%)
Query: 30 TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTI 89
T++ Q HA II G +D I+ LT S G I YA +F + P+++ +N +
Sbjct: 31 TSISHLAQTHAQIILHGFRND-ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 90 IRGFSRSSTPQFAISLFVDMLCS-EVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG 148
+RGFS + +P ++S+F + S +++P TY A + G +HG+ V G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 149 LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK------------ 196
+ + + + I+ MY + +A++VFD E D I N+MI G K
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 197 ------CGKIDESRRL-----------------FNNMAARTA-----VTWNSMISGYVRN 228
C ++D + L +++A +T IS Y +
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 229 GRLKEALEVF-------------------SNMQEE------------GVEPSEFTMVSLL 257
G++K +F SN + E G T+VSL+
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
HL + +H Y ++NF + V TA+ +Y K IE+A ++F+ +P + L
Sbjct: 330 PVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
WN++I G NG +A+ F ++Q S P+ V+ +L+AC LGA+ K+ L
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL- 445
Query: 378 VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
V + + E SI T ++ + + MT + TW +++S HG
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQ 501
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 272/512 (53%), Gaps = 39/512 (7%)
Query: 16 ISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYA 71
+SD CL CT + +Q+H +K GL D H +S + + S G I A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY--SKCGIIKDA 583
Query: 72 YMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQL 131
VF+ +P ++ S N +I G+S+++ + A+ LF +ML V P ++T+ ++ +A +
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 132 GAGHDGAQLHGRVVKLGLEKD-QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+ G Q HG++ K G + +++ +++ MY NS ++EA +F E
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS---------- 692
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
+ ++ V W M+SG+ +NG +EAL+ + M+ +GV P +
Sbjct: 693 --------------------SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T V++L C+ L SL+ G +HS I +L+ + +IDMY KCG ++ + +VF+
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 311 NPRRG-LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
RR + WNS+I G A NG+ +A++ F ++ S++ PD ++F+GVLTAC H G + +
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
+ F +M+ Y IE + H CMV++LG+ I+ + PDA W SLL +C
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 430 RKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
R HG+ + +A+K+ +L+P ++ YVL+SN+ A+ +E+A R +M++ +K PG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 490 CSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
S I++ H F AG + H + +I L D
Sbjct: 973 YSWIDVEQRTHIFAAGDKSHSEIGKIEMFLED 1004
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 39/327 (11%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+HA IK GLA + S +++ S + A VF + N WN +IRG++ +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSM-YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD---GAQLHGRVVKLGLEKDQF 154
+ LF+DM S T+ S+ A A HD G+Q H ++K L K+ F
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA---ASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ N ++ MYA KCG ++++R++F M R
Sbjct: 465 VGNALVDMYA-------------------------------KCGALEDARQIFERMCDRD 493
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
VTWN++I YV++ EA ++F M G+ + S L AC H+ L G+ VH
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ + ++ +++IDMY KCG I++A +VF P + N++I G + N E E
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-E 612
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTAC 361
AV F ++ + + P ++F ++ AC
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 31/313 (9%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G + A ++F M SP++ +WN +I G + AI F +M S V+ + T SV
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
A + G +H +KLGL + ++ ++++ MY+ + A +VF+ E + +
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
N+MI GY NG + +E+F +M+ G
Sbjct: 395 FWNAMI-------------------------------RGYAHNGESHKVMELFMDMKSSG 423
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
+FT SLL+ CA L+ G HS I + N+ V A++DMY KCG++E+A
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
++FER R WN+II + +E EA + F ++ + D L AC H+
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 366 AIDEAKYYFSLMV 378
+ + K L V
Sbjct: 544 GLYQGKQVHCLSV 556
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 163/346 (47%), Gaps = 36/346 (10%)
Query: 68 INYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA 127
++YA F + ++ +WN+++ +S P + FV + +++ P K T+ V
Sbjct: 111 VSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST 169
Query: 128 YAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC 187
A+ G Q+H ++K+GLE++ + ++ MYA +S+A+RVF+ V+ + +
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 188 NSMIMGLAKC-----------------------------------GKIDESRRLFNNMAA 212
+ G K GK+ ++R LF M++
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
V WN MISG+ + G A+E F NM++ V+ + T+ S+L+A + +L G V
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H+ + N+ V ++++ MY KC +E A +VFE + WN++I G A NG
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
+ +E F ++SS D +F +L+ C ++ + S+++
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 185/427 (43%), Gaps = 41/427 (9%)
Query: 18 DQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D T L + C D + Q H+ IIK LA + + ++ A G + A +
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC-GALEDARQI 485
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F RM + +WNTII + + A LF M + S KA +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+ G Q+H VK GL++D +++I MY+ G++ +A++VF E V++ N++
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL---- 601
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
I+GY +N L+EA+ +F M GV PSE T
Sbjct: 602 ---------------------------IAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFA 633
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVL-TAIIDMYCKCGSIENAIEVF-ERNP 312
+++ AC SL G H I + F L +++ MY + A +F E +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+ + W ++ G + NG EA++F+ +++ + PD+ +F+ VL C L ++ E +
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 373 YFSLMVN-AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRK 431
SL+ + A++++ + ++++ + M + +W SL++ K
Sbjct: 754 IHSLIFHLAHDLDELTSN--TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 432 HGNVEIA 438
+G E A
Sbjct: 812 NGYAEDA 818
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 48/395 (12%)
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G +H + + LG++ + + N I+ +YA +S A++ FD +E DV A
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTA---------- 127
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
WNSM+S Y G+ + L F ++ E + P++FT +
Sbjct: 128 ---------------------WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIV 166
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L+ CA +++ G +H + + E N A++DMY KC I +A VFE
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
CW + G G EAV F +++ +PD ++F+ V+ LG + +A+ F
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 377 MVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM---TINPDASTWGSLLSSCRKHG 433
M + P + + M+ G+ M ++ ST GS+LS+
Sbjct: 287 MSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
N+++ + +L G A + S++ + +K E+ ME + E EK +
Sbjct: 342 NLDLGLVVHAEAIKL--GLASNIYVGSSLVSMYSKCEK-MEAAAKVFEALEEKNDVFWNA 398
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLNDPGFAFQD 528
+ G H G H K E++ + G+ D
Sbjct: 399 MIRGYAHN----GESH-KVMELFMDMKSSGYNIDD 428
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 261/504 (51%), Gaps = 38/504 (7%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + H +++ D ++H HI+ G D A++++ S G ++YA VF +
Sbjct: 83 LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM-YSDLGSVDYARKVFDKTRKR 141
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA--YAQLGAGH--DG 137
+Y WN + R + + + + L+ M V+ + TY V KA ++ H G
Sbjct: 142 TIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG 201
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
++H + + G +I T++ MYA +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYA-------------------------------RF 230
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE--PSEFTMVS 255
G +D + +F M R V+W++MI+ Y +NG+ EAL F M E + P+ TMVS
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+L ACA L +L+ G+ +H YI R + + V++A++ MY +CG +E VF+R R
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+ WNS+I ++G+ ++A++ F ++ ++ P V+F+ VL AC H G ++E K F
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
M + I+P I+HY CMV++LG+ ++ M P WGSLL SCR HGNV
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
E+A+RA++++ L+P +AG YVL++++ A + ++E + L++ +K PG +E+
Sbjct: 471 ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEV 530
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLL 519
+++ F++ +P ++I++ L
Sbjct: 531 RRKMYSFVSVDEFNPLMEQIHAFL 554
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 46/345 (13%)
Query: 107 VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS 166
+ +L E P + TY + + D ++H ++ G ++D F++ +I MY++
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
G + A++VF D++R+ RT WN++
Sbjct: 126 GSVDYARKVF------------------------DKTRK-------RTIYVWNALFRALT 154
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA----HLGSLQHGEWVHSYIRRNNFE 282
G +E L ++ M GVE FT +L AC + L G+ +H+++ R +
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 283 LNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL 342
+V ++T ++DMY + G ++ A VF P R + W+++I A NG EA+ F ++
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 343 --QSSNLKPDRVSFIGVLTACKHLGAIDEAK--YYFSLMVNAYEIEPSIKHYTCMVEVLG 398
++ + P+ V+ + VL AC L A+++ K + + L I P I + +V + G
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYG 331
Query: 399 QXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQ 443
+ M + D +W SL+SS HG K+A Q
Sbjct: 332 RCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHG---YGKKAIQ 372
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
A ++ N +I + G+LK+A+ V S QE PS+ T L+ C H SL
Sbjct: 42 GAGAKISNNQLIQSLCKEGKLKQAIRVLS--QESS--PSQQTYELLILCCGHRSSLSDAL 97
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
VH +I N + + + T +I MY GS++ A +VF++ +R + WN++ L + G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
H E + + K+ ++ DR ++ VL AC
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 262/491 (53%), Gaps = 10/491 (2%)
Query: 18 DQPCLTMLQNHCTTM---KDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D+ L+++ C+ + K QIH + KTGL D + L G + + +
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSD-LFLQNCLIGLYLKCGCLGLSRQM 178
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F RMP + S+N++I G+ + A LF D++ E++ +++ S+ YAQ
Sbjct: 179 FDRMPKRDSVSYNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTS-- 234
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
DG + ++ EKD N++I Y G + +AK +FD DV+ +MI G
Sbjct: 235 -DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 293
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTM 253
AK G + ++ LF+ M R V +NSM++GYV+N EALE+FS+M++E + P + T+
Sbjct: 294 AKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL 353
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
V +L A A LG L +H YI F L + A+IDMY KCGSI++A+ VFE
Sbjct: 354 VIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ + WN++I GLA++G A + +++ +LKPD ++F+GVL AC H G + E
Sbjct: 414 KSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLC 473
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F LM ++IEP ++HY CMV++L + I+ M + P+ W + L++C H
Sbjct: 474 FELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHK 533
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
E + A+ + + YVL+SN+ A+ +++ R +MKE EK PGCS I
Sbjct: 534 EFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Query: 494 ELYGEVHEFLA 504
EL G VHEF
Sbjct: 594 ELDGRVHEFFV 604
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 265/506 (52%), Gaps = 44/506 (8%)
Query: 27 NHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSW 86
+H ++ +++HA+ +K G ++ L + + VF M + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
N +I G+S++ + A+ LF+ M S + T V A + GA +HG VV
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K GL++D+F+ NT++ MY+ + GKID + R
Sbjct: 433 KRGLDRDRFVQNTLMDMYS-------------------------------RLGKIDIAMR 461
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-----------EEGVEPSEFTMV 254
+F M R VTWN+MI+GYV + ++AL + MQ ++P+ T++
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
++L +CA L +L G+ +H+Y +NN +V V +A++DMY KCG ++ + +VF++ P++
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
+ WN II+ M+G+ +EA++ + +KP+ V+FI V AC H G +DE F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD-ASTWGSLLSSCRKHG 433
+M Y +EPS HY C+V++LG+ + M + + A W SLL + R H
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
N+EI + AAQ + QL+P A YVL++N+ +++ +++A E R MKE KEPGCS I
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLL 519
E EVH+F+AG HP+++++ L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYL 787
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 165/352 (46%), Gaps = 37/352 (10%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP 79
P L M+ +QIHAH+ K G D + + L GD Y VF R+
Sbjct: 101 PALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS 160
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD--- 136
N SWN++I + A+ F ML V+P T SV A + L
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G Q+H ++ G E + FI NT++ MY K
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMY-------------------------------GK 248
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
GK+ S+ L + R VTWN+++S +N +L EALE M EGVEP EFT+ S+
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 257 LNACAHLGSLQHGEWVHSYIRRN-NFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L AC+HL L+ G+ +H+Y +N + + N V +A++DMYC C + + VF+ R
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGA 366
+ WN++I G + N H++EA+ F + +S+ L + + GV+ AC GA
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 52/316 (16%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W ++R RS+ + A+ +VDM+ ++P +P++ KA A L G Q+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 146 KLGLEKDQF-ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
K G D ++NT++++Y KCG
Sbjct: 125 KFGYGVDSVTVANTLVNLYR-------------------------------KCGDFGAVY 153
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
++F+ ++ R V+WNS+IS + + ALE F M +E VEPS FT+VS++ AC++L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 265 ---SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
L G+ VH+Y R ELN ++ ++ MY K G + ++ + R L WN+
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL----------------G 365
++ L N EA+E+ ++ ++PD + VL AC HL G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 366 AIDEAKYYFSLMVNAY 381
++DE + S +V+ Y
Sbjct: 333 SLDENSFVGSALVDMY 348
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 51/362 (14%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+HA+ ++ G + I + V + G + + ++ +L +WNT++ +
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMY--GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG-LEKDQF 154
+ A+ +M+ V+P + T SV A + L G +LH +K G L+++ F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ + ++ MY N C ++ RR+F+ M R
Sbjct: 340 VGSALVDMYCN-------------------------------CKQVLSGRRVFDGMFDRK 368
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEE-GVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
WN+MI+GY +N KEAL +F M+E G+ + TM ++ AC G+ E +H
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
++ + + + V ++DMY + G I+ A+ +F + R L WN++I G + H
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488
Query: 334 EAVEFFSKLQS-----------SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
+A+ K+Q+ +LKP+ ++ + +L +C L A+ + K ++AY
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-----IHAYA 543
Query: 383 IE 384
I+
Sbjct: 544 IK 545
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
+R+ W ++ VR+ L+EA+ + +M G++P + +LL A A L ++ G+
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 272 VHSYIRRNNFELN-VIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
+H+++ + + ++ V V ++++Y KCG +VF+R R WNS+I L
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
A+E F + N++P + + V+TAC +L
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 268/515 (52%), Gaps = 47/515 (9%)
Query: 23 TMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS-GDINYAYMVFTRMPSP 81
TM+Q C + +Q+ +H + G SR+L CA S GD+++A +F +P P
Sbjct: 8 TMIQK-CVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKP 66
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE------VQPQKLTYPSVFKAYAQLGAGH 135
WN IIRGF+ SS P A S + ML + LT KA A+
Sbjct: 67 LTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSS 126
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
QLH ++ + GL D + T++ Y+ +G D+I+
Sbjct: 127 AMDQLHCQINRRGLSADSLLCTTLLDAYSKNG---------------DLIS--------- 162
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
+ +LF+ M R +WN++I+G V R EA+E++ M+ EG+ SE T+V+
Sbjct: 163 -------AYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVA 215
Query: 256 LLNACAHLGSLQHGEWV-HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPR 313
L AC+HLG ++ GE + H Y N+ NVIV A IDMY KCG ++ A +VFE+ +
Sbjct: 216 ALGACSHLGDVKEGENIFHGY--SND---NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGK 270
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ + WN++I G A++G A+E F KL+ + +KPD VS++ LTAC+H G ++
Sbjct: 271 KSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSV 330
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F+ M +E ++KHY C+V++L + I M++ PD W SLL + +
Sbjct: 331 FNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYS 389
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
+VE+A+ A++++ ++ + G +VL+SNV AA ++++ R M+ +K PG S I
Sbjct: 390 DVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLNDPGFAFQD 528
E G +HEF + H + +EIY +++ F ++
Sbjct: 450 EAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRE 484
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 249/489 (50%), Gaps = 36/489 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPSPNLYS--WNTIIRG 92
QQ+H H+ K G + + +++ +C G + A VF P + S +N +I G
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYC--KCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
++ +S A +F M + V +T + G LHG+ VK GL+ +
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+ N+ I MY KCG ++ RRLF+ M
Sbjct: 191 VAVLNSFITMYM-------------------------------KCGSVEAGRRLFDEMPV 219
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+ +TWN++ISGY +NG + LE++ M+ GV P FT+VS+L++CAHLG+ + G V
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
+ N F NV V A I MY +CG++ A VF+ P + L W ++I M+G
Sbjct: 280 GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMG 339
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+ F + ++PD F+ VL+AC H G D+ F M Y++EP +HY+C
Sbjct: 340 EIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+V++LG+ I+ M + PD + WG+LL +C+ H NV++A+ A KV + +P +
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNN 459
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
G YVLMSN+ + S E R++M+E K+PG S +E G VH FLAG R H +T
Sbjct: 460 IGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQT 519
Query: 513 QEIYSLLND 521
+E++ +L++
Sbjct: 520 EEVHRMLDE 528
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 191/425 (44%), Gaps = 66/425 (15%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
WN +R + S +ISL+ ML S P ++P + K+ A L G QLH V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K G E + F+ +I MY GL+++A++VF+E
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEE--------------------------- 113
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
N +++ +V +N++ISGY N ++ +A +F M+E GV TM+ L+ C
Sbjct: 114 --NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEY 171
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
L G +H + + V VL + I MY KCGS+E +F+ P +GL WN++I G
Sbjct: 172 LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISG 231
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA----------IDEAKYYFS 375
+ NG + +E + +++SS + PD + + VL++C HLGA ++ + +
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 376 LMVN------------------AYEIEP--SIKHYTCMVEVLGQXXXXXXXXXXIKGMT- 414
+ V+ ++I P S+ +T M+ G M
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
Query: 415 --INPDASTWGSLLSSCRKHGNVEIAK---RAAQKVCQLDPGDAGGYVLMSNVQAASNKF 469
I PD + + +LS+C G + RA ++ +L+PG Y + ++ + +
Sbjct: 352 RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE-HYSCLVDLLGRAGRL 410
Query: 470 EEAME 474
+EAME
Sbjct: 411 DEAME 415
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
+AA + WN + E++ ++ +M G P F+ +L +CA L G
Sbjct: 13 VAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSG 72
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG-LS-CWNSIIIGLA 327
+ +H ++ + E VLTA+I MYCKCG + +A +VFE NP+ LS C+N++I G
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
N +A F +++ + + D V+ +G++ C
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 247/460 (53%), Gaps = 3/460 (0%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
SG + A +VF MP ++ SWNT++ G+++ A+ + + S ++ + ++ +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
A + Q HG+V+ G + +S +II YA G + AKR FDE D+
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
++I G AK G ++ + +LF M + V+W ++I+GYVR G AL++F M
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
GV+P +FT S L A A + SL+HG+ +H Y+ R N N IV++++IDMY K GS+E +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 305 IEVFER-NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
VF + + WN++I LA +G +A+ + ++P+R + + +L AC H
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
G ++E +F M + I P +HY C++++LG+ I+ M PD W
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWN 485
Query: 424 SLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENF 483
++L CR HGN E+ K+AA ++ +LDP + Y+L+S++ A K+E + R +MK+
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRR 545
Query: 484 TEKEPGCSSIELYGEVHEFLA--GGRLHPKTQEIYSLLND 521
KE S IE+ +V F G H + +EIY +L++
Sbjct: 546 VNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHN 585
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 33/329 (10%)
Query: 137 GAQLHGRVVKLGLEK-DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
G +H + G ++ + +SN +I MY G +A +VFD+ ++ + N+M+ G
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
K G + +R +F++M R V+WN+M+ GY ++G L EAL + + G++ +EF+
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE------ 309
LL AC LQ H + F NV++ +IID Y KCG +E+A F+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 310 -------------------------RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS 344
P + W ++I G G A++ F K+ +
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 345 SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXX 404
+KP++ +F L A + ++ K M+ + P+ + ++++ +
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLE 363
Query: 405 XXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+ D W +++S+ +HG
Sbjct: 364 ASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 44/355 (12%)
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
+N R S +S + L +A+ ++ ++G+ + SLL C SL
Sbjct: 3 ISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSL 62
Query: 267 QHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFE----RN---------- 311
+ G+W+H +++ F+ N ++ +I MY KCG +A +VF+ RN
Sbjct: 63 KQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSG 122
Query: 312 -----------------PRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
P R + WN+++IG A +G+ EA+ F+ + + S +K + SF
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 355 IGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC-MVEVLGQXXXXXXXXXXIKGM 413
G+LTAC + + ++ A + + +C +++ + M
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV--LSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 414 TINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAM 473
T+ D W +L+S K G++E A++ ++ + +P + Q + N+ +
Sbjct: 241 TVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 474 EQRILM---KENFTEKEPGCSSIELYG-----EVHEFLAGGRLHPKTQEIYSLLN 520
+ I + E FT C+S + E+H ++ + P I SL++
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLID 354
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 229/381 (60%), Gaps = 2/381 (0%)
Query: 143 RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDE 202
R L E+D + NT+I Y G + EA+ +FD+ DV++ N+++ G A G ++
Sbjct: 80 RYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEA 139
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVSLLNACA 261
R+F++M R +WN +I GY +NGR+ E L F M +EG V P++ TM +L+ACA
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 262 HLGSLQHGEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
LG+ G+WVH Y + +++V V A+IDMY KCG+IE A+EVF+ RR L WN
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
++I GLA +GH EA+ F ++++S + PD+V+F+GVL ACKH+G +++ YF+ M
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
+ I P I+H C+V++L + I M + DA W +LL + + + V+I +
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 441 AAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVH 500
A +++ +L+P + +V++SN+ + +F++A ++ M++ +KE G S IE +
Sbjct: 380 ALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLV 439
Query: 501 EFLAGGRLHPKTQEIYSLLND 521
+F + G HP+T+E+ +L +
Sbjct: 440 KFYSSGEKHPRTEELQRILRE 460
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 50/301 (16%)
Query: 67 DINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
D+ A F P ++ WNT+I G+ A SLF M C +V +++ +V +
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDV----MSWNTVLE 129
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEA----KRVFDEKV-- 180
YA +G + RV E++ F N +I YA +G +SE KR+ DE
Sbjct: 130 GYANIG----DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVV 185
Query: 181 -----------------------------------ELDVIACNSMIMGLAKCGKIDESRR 205
++DV N++I KCG I+ +
Sbjct: 186 PNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME 245
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
+F + R ++WN+MI+G +G EAL +F M+ G+ P + T V +L AC H+G
Sbjct: 246 VFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGL 305
Query: 266 LQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
++ G + +S + + ++D+ + G + A+E + P + + + ++
Sbjct: 306 VEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Query: 325 G 325
G
Sbjct: 366 G 366
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
G+++ A +VF E VE +V+ SMI G + +RR F+ R V WN+MISGY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
G + EA +F M P +V+
Sbjct: 102 EMGNMLEARSLFDQM------PCR---------------------------------DVM 122
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSS 345
+++ Y G +E VF+ P R + WN +I G A NG E + F ++
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 346 NLKPDRVSFIGVLTACKHLGAIDEAKYY--FSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
++ P+ + VL+AC LGA D K+ + + +++ ++K+ ++++ G+
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKN--ALIDMYGKCGAI 240
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
KG+ D +W ++++ HG+
Sbjct: 241 EIAMEVFKGIK-RRDLISWNTMINGLAAHGH 270
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 240/427 (56%), Gaps = 4/427 (0%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S +G I A +F ++ ++ SW T+I G R + A+ + +ML ++P ++
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+ A A+ G QLHG +VK G + F+ TIIH YA S + A + F+ V+
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM- 241
+ + N++I G K G ++++R +F+ + +WN+MISGY ++ + AL +F M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
V+P TMVS+ +A + LGSL+ G+ H Y+ + N + AIIDMY KCGSI
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 302 ENAIEVFERNPR---RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
E A+ +F + +S WN+II G A +GH + A++ +S LQS +KP+ ++F+GVL
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 359 TACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD 418
+AC H G ++ K YF M + + IEP IKHY CMV++LG+ IK M + D
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 419 ASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRIL 478
WG LLS+ R HGNVEIA+ AA ++ +DP G V++SNV A + ++E+ R
Sbjct: 610 VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Query: 479 MKENFTE 485
M+ E
Sbjct: 670 MRTRDVE 676
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 235/514 (45%), Gaps = 83/514 (16%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A +F MP + S+ T+I+G+++++ A+ LF +M + ++T +V A +
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
LG D L +KL LE F+S ++HMY L +A+++FDE E +++ N M
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
+ G +K G I+++ LF+ + + V+W +MI G +R +L EAL ++ M G++PSE
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 251 FTMVSLLNACAH-LGS---LQ-HGEWV---------------HSYIRRNNFEL------- 283
MV LL+A A +GS LQ HG V H Y N+ +L
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 284 ----NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFF 339
++ A+I + K G +E A EVF++ + + WN++I G A + + A+ F
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 340 SKL-QSSNLKPDRVSFIGVLTACKHLGAIDEAKY---YFSL------------MVNAY-- 381
++ SS +KPD ++ + V +A LG+++E K Y + +++ Y
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 382 ----EIEPSIKHYT---------------CMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
E +I H T C G ++ + I P++ T+
Sbjct: 486 CGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITF 545
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPG---DAGGYVLMSNVQAASNKFEEAMEQRILM 479
+LS+C G VE+ K + + + D G D Y M ++ + + EEA E
Sbjct: 546 VGVLSACCHAGLVELGKTYFESM-KSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE----- 599
Query: 480 KENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQ 513
+K P + + ++G + L+ R H +
Sbjct: 600 ---MIKKMPVKADVMIWGML---LSASRTHGNVE 627
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 141/242 (58%), Gaps = 4/242 (1%)
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G Q+H RV+K GL+ + +I N++++MYA LL++A+ VF + +LD + N M+ G +
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
++ ++ +LF+ M R+ V++ ++I GY +N + EA+E+F M+ G+ +E T+ ++
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
++AC+HLG + + S + E V V T ++ MYC C +++A ++F+ P R L
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 239
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
WN ++ G + G +A E F ++ + D VS+ ++ C +DEA Y++
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQIT----EKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 377 MV 378
M+
Sbjct: 296 ML 297
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 135/271 (49%), Gaps = 36/271 (13%)
Query: 50 DHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDM 109
DHIA+ L +G + A VF + +++SWN +I G+++S +PQ A+ LF +M
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 110 L-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGL 168
+ S+V+P +T SVF A + LG+ +G + H + + + ++ II MY
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMY----- 483
Query: 169 LSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFN---NMAARTAVTWNSMISGY 225
AKCG I+ + +F+ N+++ T WN++I G
Sbjct: 484 --------------------------AKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE-WVHSYIRRNNFELN 284
+G K AL+++S++Q ++P+ T V +L+AC H G ++ G+ + S + E +
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 285 VIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+ ++D+ K G +E A E+ ++ P +
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 270/512 (52%), Gaps = 44/512 (8%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLT---FCASSSGDINYAYMVFTRM 78
L + C T+K + H+ I GL + A S++LT + + +YA +F +
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 79 PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE---VQPQKLTYPSVFKAYAQLGAGH 135
PN + ++T+IR SRSS P + F+ M+ E + P LT+ + A +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 136 DGAQLHGRVVKLGL-EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G Q+H VVK G+ D + ++ +Y LL +A++VFDE + DV
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDV---------- 183
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
V W+ +++GYVR G E LEVF M +G+EP EF++
Sbjct: 184 ---------------------VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVT 222
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
+ L ACA +G+L G+W+H ++++ ++ E +V V TA++DMY KCG IE A+EVF++ R
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR 282
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN-LKPDRVSFIGVLTACKHLGAIDEAKY 372
R + W ++I G A G+ ++A+ +L+ + +KPD V +GVL AC H G ++E +
Sbjct: 283 RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRS 342
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
M YEI P +HY+C+V+++ + I+ M + P AS WG+LL+ CR H
Sbjct: 343 MLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Query: 433 GNVEIAKRAAQKVCQLDPGDA----GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEP 488
NVE+ + A + + L+ G+ V +SN+ + + EA + R ++++ K P
Sbjct: 403 KNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTP 462
Query: 489 GCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
G S +E+ G V +F++G HP +I+++++
Sbjct: 463 GWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIH 494
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 247/458 (53%), Gaps = 32/458 (6%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S GD++ A VF M ++ S+ ++I G++R A+ LF +M + P T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+V A+ +G ++H + + L D F+SN ++ MY
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY------------------- 442
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
AKCG + E+ +F+ M + ++WN++I GY +N EAL +F+ +
Sbjct: 443 ------------AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 243 EEG-VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
EE P E T+ +L ACA L + G +H YI RN + + V +++DMY KCG++
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
A +F+ + L W +I G M+G +EA+ F++++ + ++ D +SF+ +L AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 362 KHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAST 421
H G +DE +F++M + +IEP+++HY C+V++L + I+ M I PDA+
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 422 WGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKE 481
WG+LL CR H +V++A++ A+KV +L+P + G YVLM+N+ A + K+E+ R + +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 482 NFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
K PGCS IE+ G V+ F+AG +P+T+ I + L
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 195/423 (46%), Gaps = 73/423 (17%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
++KD +++ I G D S+ L+ ++ GD+ A VF + WN ++
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSK-LSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 167
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL- 149
++S +I LF M+ S V+ T+ V K+++ L + H G QLHG ++K G
Sbjct: 168 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 227
Query: 150 ------------------------------EKDQFISNTIIHMYANSGLLSEAKRVFDE- 178
E+D N+II+ Y ++GL + VF +
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 179 ---KVELDVIA-----------------------------------CNSMIMGLAKCGKI 200
+E+D+ CN+++ +KCG +
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
D ++ +F M+ R+ V++ SMI+GY R G EA+++F M+EEG+ P +T+ ++LN C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
A L G+ VH +I+ N+ ++ V A++DMY KCGS++ A VF + + WN
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 321 SIIIGLAMNGHEREAVEFFS-KLQSSNLKPDRVSFIGVLTACKHLGAIDEAK-YYFSLMV 378
+II G + N + EA+ F+ L+ PD + VL AC L A D+ + + +M
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 379 NAY 381
N Y
Sbjct: 528 NGY 530
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 42/316 (13%)
Query: 18 DQPCLTMLQNHCTT---MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D +T + N C + + +++H I + L D I S L + G + A +V
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD-IFVSNALMDMYAKCGSMQEAELV 454
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQ--PQKLTYPSVFKAYAQLG 132
F+ M ++ SWNTII G+S++ A+SLF ++L E + P + T V A A L
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLS 513
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
A G ++HG +++ G D+ ++N+++ MYA G L A +FD+ D+++ MI
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI- 572
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
+GY +G KEA+ +F+ M++ G+E E +
Sbjct: 573 ------------------------------AGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENAIEVFER 310
VSLL AC+H G + G W I R+ ++ V I+DM + G + A E
Sbjct: 603 FVSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 311 NP-RRGLSCWNSIIIG 325
P + W +++ G
Sbjct: 662 MPIPPDATIWGALLCG 677
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 153/403 (37%), Gaps = 76/403 (18%)
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
NT +R F S + A+ L ++ P+ L SV + A + DG ++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRG 122
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
G D + + + MY N CG + E+ R+
Sbjct: 123 NGFVIDSNLGSKLSLMYTN-------------------------------CGDLKEASRV 151
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
F+ + A+ WN +++ ++G ++ +F M GVE +T + + + L S+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
GE +H +I ++ F V +++ Y K +++A +VF+ R + WNSII G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC------------------------- 361
NG + + F ++ S ++ D + + V C
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 362 ----------KHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIK 411
G +D AK F M + S+ YT M+ + +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMS-----DRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 412 GMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
M I+PD T ++L+ C ++ ++ KR + + + D G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
R+ N+ + + +G L+ A+++ + ++P T+ S+L CA SL+ G+ V
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
++IR N F ++ + + + MY CG ++ A VF+ WN ++ LA +G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 333 REAVEFFSKLQSSNLKPDRVSF 354
++ F K+ SS ++ D +F
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTF 198
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 261/493 (52%), Gaps = 4/493 (0%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
T+ + +HAHI+K G+ + L G ++A VF MP + +W +++
Sbjct: 18 TLTTAKALHAHIVKLGIVQ-CCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76
Query: 91 RGFSRSS-TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
++++ + + S ++P + ++ KA A LG+ G Q+H +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
D+ + ++++ MYA GLL+ AK VFD + I+ +M+ G AK G+ +E+ LF
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE-FTMVSLLNACAHLGSLQH 268
+ + +W ++ISG+V++G+ EA VF+ M+ E V+ + + S++ ACA+L +
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM 328
G VH + F+ V + A+IDMY KC + A ++F R R + W S+I+G+A
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIK 388
+G +A+ + + S +KP+ V+F+G++ AC H+G +++ + F M Y I PS++
Sbjct: 317 HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK-VCQ 447
HYTC++++LG+ I M PD TW +LLS+C++ G ++ R A V
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Query: 448 LDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGR 507
D Y+L+SN+ A+++ + + E R + E K+PG SS+E+ E F AG
Sbjct: 437 FKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGET 496
Query: 508 LHPKTQEIYSLLN 520
HP ++I+ LL
Sbjct: 497 SHPLKEDIFRLLK 509
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 5/184 (2%)
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L CA +L + +H++I + + ++++Y KCG+ +A++VF+ P R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 317 SCWNSIIIGL-AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK-YYF 374
W S++ L N + F S SS L+PD F ++ AC +LG+ID + +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
+V+ Y + +K + +V++ + + + + +W +++S K G
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 435 VEIA 438
E A
Sbjct: 187 KEEA 190
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 266/512 (51%), Gaps = 44/512 (8%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLT---FCASSSGDINYAYMVFTRM 78
L + C T+K + H+ I GL + A S++LT + + +YA +F +
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 79 PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE---VQPQKLTYPSVFKAYAQLGAGH 135
PN + ++T+IR SRSS P + F+ M+ E + P LT+ + A +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 136 DGAQLHGRVVKLGL-EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G Q+H VVK G+ D + ++ +Y LL +A++VFDE + DV
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDV---------- 183
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
V W+ +++GYVR G E LEVF M G+EP EF++
Sbjct: 184 ---------------------VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVT 222
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
+ L ACA +G+L G+W+H ++++ + E +V V TA++DMY KCG IE A+EVFE+ R
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR 282
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN-LKPDRVSFIGVLTACKHLGAIDEAKY 372
R + W ++I G A G+ ++A +++ + +KPD V +GVL AC H G ++E +
Sbjct: 283 RNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRT 342
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
M Y I P +HY+C+V+++ + I+ M + P AS WG+LL+ CR H
Sbjct: 343 MLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Query: 433 GNVEIAKRAAQKVCQLDPGDA----GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEP 488
NVE+ + A Q + L+ G+ V +SN+ + + EA + R ++++ K P
Sbjct: 403 KNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
Query: 489 GCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
G S +E+ G V +F++G HP +I++L++
Sbjct: 463 GWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIH 494
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 273/506 (53%), Gaps = 51/506 (10%)
Query: 57 VLTFCASSSG-----DINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC 111
V+T+ A SG ++ A M+F MP N+ SWNT+I G+++S A+ LF +M
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM-- 166
Query: 112 SEVQPQK--LTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLL 169
P++ +++ S+ KA Q G + L R+ + +D ++ A +G +
Sbjct: 167 ----PERNIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKV 218
Query: 170 SEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNG 229
EA+R+FD E ++I+ N+MI G A+ +IDE+ +LF M R +WN+MI+G++RN
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR 278
Query: 230 RL-------------------------------KEALEVFSNMQEEG-VEPSEFTMVSLL 257
+ +EAL VFS M +G V+P+ T VS+L
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP--RRG 315
+AC+ L L G+ +H I ++ + N IV +A+++MY K G + A ++F+ +R
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
L WNS+I A +GH +EA+E +++++ KP V+++ +L AC H G +++ +F
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
+V + +HYTC+V++ G+ I S +G++LS+C H V
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
IAK +KV + DAG YVLMSN+ AA+ K EEA E R+ MKE +K+PGCS +++
Sbjct: 519 SIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLLND 521
+ H F+ G + HP+ + + S+L+D
Sbjct: 579 GKQNHLFVVGDKSHPQFEALDSILSD 604
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR-TAVTWNSMISGY 225
G ++EA+++FD E DV+ +I G K G + E+R LF+ + +R VTW +M+SGY
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
+R+ +L A +F M E V + ++++ A G + + + E N+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMP----ERNI 171
Query: 286 IVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS 345
+ +++ + G I+ A+ +FER PRR + W +++ GLA NG EA F +
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 346 NLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
N+ +S+ ++T IDEA F +M
Sbjct: 232 NI----ISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 24/259 (9%)
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
+I L K GKI E+R+LF+ + R VTW +I+GY++ G ++EA E+F + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
MVS +L S Q + + + E NV+ +ID Y + G I+ A+E+F+
Sbjct: 112 WTAMVS-----GYLRSKQLS--IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
P R + WNS++ L G EA+ F ++ + D VS+ ++ G +DE
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDE 220
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
A+ F M E +I + M+ Q + M D ++W ++++
Sbjct: 221 ARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITGF 274
Query: 430 RKHGNVEIAKRAAQKVCQL 448
I R K C L
Sbjct: 275 -------IRNREMNKACGL 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 26/287 (9%)
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDE-KVELDVIACNSMIMGLAKCGKIDESRRLFN 208
E+D +I Y G + EA+ +FD +V+ +M+ G + ++ + LF
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
M R V+WN+MI GY ++GR+ +ALE+F M E + + S++ A G +
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDE 189
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM 328
+ + R +V+ TA++D K G ++ A +F+ P R + WN++I G A
Sbjct: 190 AMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Query: 329 NGHEREAVEFFSKLQSSNLKPDR--VSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
N EA + F + P+R S+ ++T +++A F M E +
Sbjct: 246 NNRIDEADQLFQVM------PERDFASWNTMITGFIRNREMNKACGLFDRMP-----EKN 294
Query: 387 IKHYTCM----VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
+ +T M VE ++ ++ P+ T+ S+LS+C
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 258/485 (53%), Gaps = 2/485 (0%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H +I+ G D + ++T+ + +I A VF M ++ SWN++I G+S+
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITY-YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 96 SSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
S + + ++ ML CS+ +P +T SVF+A Q G ++H ++++ ++ D
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ N +I YA G L A+ +FDE E D + ++I G G + E+ LF+ M +
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
TWN+MISG ++N +E + F M G P+ T+ SLL + + +L+ G+ +H+
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ RN + N+ V T+IID Y K G + A VF+ R L W +II A++G
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
A F ++Q KPD V+ VL+A H G D A++ F M+ Y+IEP ++HY CMV
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMV 510
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAG 454
VL + I M I+P A WG+LL+ G++EIA+ A ++ +++P + G
Sbjct: 511 SVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG 570
Query: 455 GYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 514
Y +M+N+ + ++EEA R MK +K PG S IE + F+A +++E
Sbjct: 571 NYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKE 630
Query: 515 IYSLL 519
+Y ++
Sbjct: 631 MYEII 635
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 251/496 (50%), Gaps = 35/496 (7%)
Query: 29 CTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C + D + QIH+ IIKT + S VL + G ++ A+ + R ++ S
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCS-VLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W T+I G+++ + A++ F ML ++ ++ + A A L A +G Q+H +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
G D N ++ +Y+ +CGKI+ES
Sbjct: 619 VSGFSSDLPFQNALVTLYS-------------------------------RCGKIEESYL 647
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
F A + WN+++SG+ ++G +EAL VF M EG++ + FT S + A + +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
++ G+ VH+ I + ++ V A+I MY KCGSI +A + F + WN+II
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
+ +G EA++ F ++ SN++P+ V+ +GVL+AC H+G +D+ YF M + Y + P
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
+HY C+V++L + I+ M I PDA W +LLS+C H N+EI + AA +
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887
Query: 446 CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAG 505
+L+P D+ YVL+SN+ A S K++ R MKE +KEPG S IE+ +H F G
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Query: 506 GRLHPKTQEIYSLLND 521
+ HP EI+ D
Sbjct: 948 DQNHPLADEIHEYFQD 963
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 160/333 (48%), Gaps = 32/333 (9%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIHA I+ GL D L S +G ++ A VF + + SW +I G S+
Sbjct: 207 EQIHARILYQGL-RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ AI LF DM + P + SV A ++ + G QLHG V+KLG D ++
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N ++ +Y + G L A+ + F+NM+ R A
Sbjct: 326 CNALVSLYFHLGNLISAEHI-------------------------------FSNMSQRDA 354
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
VT+N++I+G + G ++A+E+F M +G+EP T+ SL+ AC+ G+L G+ +H+Y
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ F N + A++++Y KC IE A++ F + WN +++ + R +
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
F ++Q + P++ ++ +L C LG ++
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 199/451 (44%), Gaps = 66/451 (14%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
++ + +++H+ I+K GL + + ++ F GD+ A+ VF MP +++WN +I
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK-GDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGA-QLHGRVVKLGL 149
+ + + LFV M+ V P + T+ V +A D Q+H R++ GL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
+ N +I +Y+ +G + A+RVFD
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFD-------------------------------G 247
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
+ + +W +MISG +N EA+ +F +M G+ P+ + S+L+AC + SL+ G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
E +H + + F + V A++ +Y G++ +A +F +R +N++I GL+
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK----YYFSL--------- 376
G+ +A+E F ++ L+PD + ++ AC G + + Y L
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 377 --MVNAY----EIEPSIKHY-----------TCMVEVLGQXXXXXXXXXXIKGMTIN--- 416
++N Y +IE ++ ++ M+ G + M I
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 417 PDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
P+ T+ S+L +C + G++E+ ++ ++ +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 17 SDQPCLTMLQNHCT---TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
SD+ LT + C +K+ QQIHA +G + D + L S G I +Y+
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD-LPFQNALVTLYSRCGKIEESYL 647
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
F + + + +WN ++ GF +S + A+ +FV M + T+ S KA ++
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G Q+H + K G + + + N +I MYA G +S+A++ F E
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE--------------- 752
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
++ + V+WN++I+ Y ++G EAL+ F M V P+ T+
Sbjct: 753 ----------------VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV----LTAIIDMYCKCGSIENAIEVFE 309
V +L+AC+H+G + G +Y N E + ++DM + G + A E +
Sbjct: 797 VGVLSACSHIGLVDKG---IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 310 RNP 312
P
Sbjct: 854 EMP 856
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 133/344 (38%), Gaps = 77/344 (22%)
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
G+ +G +LH +++KLGL+ + +S + Y G L A +VFDE
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE------------- 145
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
M RT TWN MI + E +F M E V P+E
Sbjct: 146 ------------------MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEG 187
Query: 252 TMVSLLNACAHLGSLQHG--EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
T +L AC GS+ E +H+ I + +V +ID+Y + G ++ A VF+
Sbjct: 188 TFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK------- 362
+ S W ++I GL+ N E EA+ F + + P +F VL+ACK
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 363 ----------------------------HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
HLG + A++ FS M + Y ++
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLI 361
Query: 395 EVLGQXXXXXXXXXXIKGMTIN---PDASTWGSLLSSCRKHGNV 435
L Q K M ++ PD++T SL+ +C G +
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 240 NMQEEGVEPSEFTMVSLLNACAHL-GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
+++ G+ P+ T+ LL C GSL G +HS I + + N + + D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G + A +VF+ P R + WN +I LA E F ++ S N+ P+ +F GVL
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 359 TACK 362
AC+
Sbjct: 194 EACR 197
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 247/484 (51%), Gaps = 32/484 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH IK GL +A S L S +N A +F N +W+ ++ G+S+
Sbjct: 241 RQIHCITIKNGLL-GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ A+ LF M + ++P + T V A + + +G QLH ++KLG E+ F
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+ ++ MYA +G L++A R+ F+ + R
Sbjct: 360 TTALVDMYAKAGCLADA-------------------------------RKGFDCLQERDV 388
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
W S+ISGYV+N +EAL ++ M+ G+ P++ TM S+L AC+ L +L+ G+ VH +
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
++ F L V + +A+ MY KCGS+E+ VF R P + + WN++I GL+ NG EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+E F ++ + ++PD V+F+ +++AC H G ++ +YF++M + ++P + HY CMV+
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVD 568
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+L + I+ I+ W LLS+C+ HG E+ A +K+ L ++
Sbjct: 569 LLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST 628
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEI 515
YV +S + A + + M+ N KE GCS IEL + H F+ G +HP +E
Sbjct: 629 YVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET 688
Query: 516 YSLL 519
L+
Sbjct: 689 KDLV 692
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 173/349 (49%), Gaps = 39/349 (11%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H II+TG A I + VL + G + A+ +F + ++ SWN++I G+S+
Sbjct: 34 RAVHGQIIRTG-ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 96 S---STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ S+ + LF +M ++ P T +FKA + L + G Q H VVK+ D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
++ +++ MY +GL +++ ++F M
Sbjct: 153 IYVDTSLVGMYCKAGL-------------------------------VEDGLKVFAYMPE 181
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFS---NMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
R TW++M+SGY GR++EA++VF+ +EEG + S++ ++L++ A + G
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLG 240
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
+H +N V + A++ MY KC S+ A ++F+ + R W++++ G + N
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
G EAV+ FS++ S+ +KP + +GVL AC + ++E K S ++
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 36/339 (10%)
Query: 36 QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+Q HA ++K D ++ S V +C +G + VF MP N Y+W+T++ G++
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYC--KAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 95 RSSTPQFAISLFVDML--CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ AI +F L E + +V + A G Q+H +K GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+SN ++ MY+ L+EA ++FD + + I ++M+ G
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG------------------- 296
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
Y +NG EA+++FS M G++PSE+T+V +LNAC+ + L+ G+ +
Sbjct: 297 ------------YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
HS++ + FE ++ TA++DMY K G + +A + F+ R ++ W S+I G N
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
EA+ + +++++ + P+ + VL AC L ++ K
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+++ +Q+H+ ++K G H+ A+ L + +G + A F + ++ W ++I
Sbjct: 338 LEEGKQLHSFLLKLGFER-HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
G+ ++S + A+ L+ M + + P T SV KA + L G Q+HG +K G
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+ I + + MY+ G L + VF DV++ N+MI GL+ G+ DE
Sbjct: 457 EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE--------- 507
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
ALE+F M EG+EP + T V++++AC+H G ++ G W
Sbjct: 508 ----------------------ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-W 544
Query: 272 VHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENAIEVFER-NPRRGLSCWNSII 323
+ + + L+ V ++D+ + G ++ A E E N GL W ++
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/509 (31%), Positives = 253/509 (49%), Gaps = 35/509 (6%)
Query: 14 KFISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINY 70
+F D ++ + C ++D + I+ +++K G + +L + GD+
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES-TVRNILIDVYAKCGDMIT 360
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A VF M + SWN+II G+ +S A+ LF M+ E Q +TY + +
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
L G LH +K G+ D +SN +I MYA
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYA-------------------------- 454
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
KCG++ +S ++F++M VTWN++IS VR G L+V + M++ V P
Sbjct: 455 -----KCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDM 509
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T + L CA L + + G+ +H + R +E + + A+I+MY KCG +EN+ VFER
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
RR + W +I M G +A+E F+ ++ S + PD V FI ++ AC H G +DE
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
F M Y+I+P I+HY C+V++L + I+ M I PDAS W S+L +CR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
G++E A+R ++++ +L+P D G +L SN AA K+++ R +K+ K PG
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGY 749
Query: 491 SSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
S IE+ VH F +G P+++ IY L
Sbjct: 750 SWIEVGKNVHVFSSGDDSAPQSEAIYKSL 778
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 200/418 (47%), Gaps = 38/418 (9%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRM- 78
P ++ + + + + ++IHA +I GL + +++ S + + VF R+
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLID-KYSHFREPASSLSVFRRVS 66
Query: 79 PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGA 138
P+ N+Y WN+IIR FS++ A+ + + S+V P K T+PSV KA A L G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCG 198
++ +++ +G E D F+ N ++ MY+ GLL+ A++VFDE D+++ NS
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS--------- 177
Query: 199 KIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN 258
+ISGY +G +EALE++ ++ + P FT+ S+L
Sbjct: 178 ----------------------LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
A +L ++ G+ +H + ++ V+V ++ MY K +A VF+ R
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS 275
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
+N++I G E+V F + KPD ++ VL AC HL + AKY ++ M+
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 379 NA-YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
A + +E ++++ +++V + M D +W S++S + G++
Sbjct: 335 KAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 254/507 (50%), Gaps = 35/507 (6%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAY 72
+SD + C ++ + IH H+I G A+ + T + G++
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM-YTECGEMQDGL 264
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+F M ++ SW ++I + R A+ F+ M S+V P + T+ S+F A A L
Sbjct: 265 CLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLS 324
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G QLH V+ LGL +SN+++ MY+
Sbjct: 325 RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST--------------------------- 357
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
CG + + LF M R ++W+++I GY + G +E + FS M++ G +P++F
Sbjct: 358 ----CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+ SLL+ ++ ++ G VH+ E N V +++I+MY KCGSI+ A +F
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
R + ++I G A +G +EA++ F K +PD V+FI VLTAC H G +D +
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
YF++M Y + P+ +HY CMV++L + I M+ D W +LL +C+
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
G++E +RAA+++ +LDP A V ++N+ +++ EEA R MK KEPG SS
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 493 IELYGEVHEFLAGGRLHPKTQEIYSLL 519
I++ V F++G R HP++++IY++L
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 144/303 (47%), Gaps = 33/303 (10%)
Query: 64 SSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE--VQPQKLTY 121
++G++ A VF +MP ++ SW +II+ + ++ A+ LF M + V P
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE 181
V KA Q G LH VK L ++ ++++ MY KRV
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY---------KRV------ 156
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
GKID+S R+F+ M R AVTW ++I+G V GR KE L FS M
Sbjct: 157 ----------------GKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+T L ACA L +++G+ +H+++ F + V ++ MY +CG +
Sbjct: 201 SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
++ + +FE R + W S+I+ G E +AVE F K+++S + P+ +F + +AC
Sbjct: 261 QDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Query: 362 KHL 364
L
Sbjct: 321 ASL 323
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ--EEG 245
NS + L G + +R++F+ M V+W S+I YV EAL +FS M+ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
V P + +L AC ++ +GE +H+Y + + +V V ++++DMY + G I+ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
VF P R W +II GL G +E + +FS++ S D +F L AC L
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 366 AIDEAK 371
+ K
Sbjct: 224 QVKYGK 229
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 265/509 (52%), Gaps = 47/509 (9%)
Query: 22 LTMLQNHC--TTMKDFQQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINYAYMVFTRM 78
+T++Q+ ++K + +HA I+ G+ +A + + T+ GD++ A +VF +
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY--GKCGDLDSAKLVFEAI 214
Query: 79 PSPN--LYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
+ + SWN++ + +S A L+ ML E +P T+ ++ +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G +H + LG ++D NT I MY+ S A
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA------------------------ 310
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
R LF+ M +RT V+W MISGY G + EAL +F M + G +P T++SL
Sbjct: 311 -------RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 257 LNACAHLGSLQHGEWVHSYI-----RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
++ C GSL+ G+W+ + +R+N V++ A+IDMY KCGSI A ++F+
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDN----VMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 312 PRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
P + + W ++I G A+NG EA++ FSK+ + KP+ ++F+ VL AC H G++++
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 372 YYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRK 431
YF +M Y I P + HY+CMV++LG+ I+ M+ PDA WG+LL++C+
Sbjct: 480 EYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKI 539
Query: 432 HGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
H NV+IA++AA+ + L+P A YV M+N+ AA+ ++ R +MK+ +K PG S
Sbjct: 540 HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGES 599
Query: 492 SIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
I++ G+ H F G H + + IY LN
Sbjct: 600 VIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 35/348 (10%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
C + D + +HAH+IK+ D + + V F +S ++YA VF RMP +
Sbjct: 62 CARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS--VDYAAKVFERMPERDAT 119
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
+WN ++ GF +S A SLF +M +E+ P +T ++ ++ + + +H
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
++LG++ ++NT I Y G L AK VF+ ID
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE---------------------AIDR-- 216
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
RT V+WNSM Y G +A ++ M E +P T ++L +C +
Sbjct: 217 ------GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
+L G +HS+ + ++ + I MY K +A +F+ R W +I
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
G A G EA+ F + S KPD V+ + +++ C G+++ K+
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 159/404 (39%), Gaps = 70/404 (17%)
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
+WN IR + P ++ LF +M +P T+P V KA A+L +H +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
+K D F+ + M+ KC +D +
Sbjct: 79 IKSPFWSDVFVGTATVDMFV-------------------------------KCNSVDYAA 107
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
++F M R A TWN+M+SG+ ++G +A +F M+ + P T+++L+ + +
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR--RGLSCWNSI 322
SL+ E +H+ R ++ V V I Y KCG +++A VFE R R + WNS+
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK----------------HLGA 366
++ G +A + + KPD +FI + +C+ HLG
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 367 ID--EAKYYFSLMVNAYEIEPSIK------------HYTCMVEVLGQXXXXXXXXXXIKG 412
EA F M + E S + +T M+ +
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 413 MTIN---PDASTWGSLLSSCRKHGNVEIAK----RAAQKVCQLD 449
M + PD T SL+S C K G++E K RA C+ D
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 84/155 (54%)
Query: 204 RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
RRL+ + WN I V E+L +F M+ G EP+ FT + ACA L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
+ E VH+++ ++ F +V V TA +DM+ KC S++ A +VFER P R + WN+++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G +GH +A F +++ + + PD V+ + ++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 271/526 (51%), Gaps = 43/526 (8%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q HA I G+ D+I + +L F G I YA MVF RM ++ +WN II G+ +
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNF-YCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ AI + M +++ +T ++ A A+ G ++ ++ E D +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM------------------------- 190
++T++ MYA G + +AK+VFD VE D+I N++
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 191 ----------IMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALE 236
I+ L + G++DE++ +F M + ++W +M++G V+NG +EA+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 237 VFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVL-TAIIDMY 295
MQE G+ P+ F++ L+ACAHL SL G +H YI RN +++ + T+++DMY
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMY 592
Query: 296 CKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFI 355
KCG I A +VF L N++I A+ G+ +EA+ + L+ LKPD ++
Sbjct: 593 AKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITIT 652
Query: 356 GVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTI 415
VL+AC H G I++A F+ +V+ ++P ++HY MV++L I+ M
Sbjct: 653 NVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF 712
Query: 416 NPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQ 475
PDA SL++SC K E+ ++K+ + +P ++G YV +SN A ++E ++
Sbjct: 713 KPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKM 772
Query: 476 RILMKENFTEKEPGCSSIELYGE--VHEFLAGGRLHPKTQEIYSLL 519
R +MK +K+PGCS I++ GE VH F+A + H + EI +L
Sbjct: 773 REMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 199/405 (49%), Gaps = 36/405 (8%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H +++K+GL D + + L G ++ A VF +P N +WN ++ G+ ++
Sbjct: 195 VHGYVVKSGL-EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN 157
+ AI LF DM V+P ++T + A A +G +G Q H + G+E D +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 158 TIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVT 217
++++ Y GL I+ + +F+ M + VT
Sbjct: 314 SLLNFYCKVGL-------------------------------IEYAEMVFDRMFEKDVVT 342
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
WN +ISGYV+ G +++A+ + M+ E ++ T+ +L++A A +L+ G+ V Y
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE 337
R++FE ++++ + ++DMY KCGSI +A +VF+ + L WN+++ A +G EA+
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
F +Q + P+ +++ ++ + G +DEAK F L + + I P++ +T M+ +
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNGM 521
Query: 398 GQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAK 439
Q ++ M + P+A + LS+C ++ I +
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 172/337 (51%), Gaps = 37/337 (10%)
Query: 29 CTTMKDF---QQIHAHIIKTG--LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNL 83
C +D +QIHA I+K G A + ++++ F A + A ++F+++ N+
Sbjct: 80 CVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA-LEIAEVLFSKLRVRNV 138
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
+SW II R + A+ FV+ML +E+ P P+V KA L G +HG
Sbjct: 139 FSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGY 198
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES 203
VVK GLE F+++++ MY G+L +A +VFDE + + +A N++++G + GK +E+
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEA 258
Query: 204 RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
RL FS+M+++GVEP+ T+ + L+A A++
Sbjct: 259 IRL-------------------------------FSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
G ++ G+ H+ N EL+ I+ T++++ YCK G IE A VF+R + + WN II
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLII 347
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
G G +A+ ++ LK D V+ +++A
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 164/376 (43%), Gaps = 49/376 (13%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
SP+ S+ + ++ + A+SL +M ++ Y + + G Q
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 140 LHGRVVKLG--LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
+H R++K G ++++I ++ YA KC
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYA-------------------------------KC 120
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
++ + LF+ + R +W ++I R G + AL F M E + P F + ++
Sbjct: 121 DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC 180
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
AC L + G VH Y+ ++ E V V +++ DMY KCG +++A +VF+ P R
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL- 376
WN++++G NG EA+ FS ++ ++P RV+ L+A ++G ++E K ++
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 377 MVNAYEIE----PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+VN E++ S+ ++ C V ++ + D TW ++S +
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLI-------EYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 433 GNVEIAKRAAQKVCQL 448
G VE A +CQL
Sbjct: 354 GLVE----DAIYMCQL 365
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 248/487 (50%), Gaps = 33/487 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
QQ+HA + TG + D +++L F S + M+F MP + S+N +I +S+
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDF-YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + ++ F +M C + + ++ A L + G QLH + + + +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N+++ MYA KC +E+ +F ++ RT
Sbjct: 389 GNSLVDMYA-------------------------------KCEMFEEAELIFKSLPQRTT 417
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+W ++ISGYV+ G L++F+ M+ + + T ++L A A SL G+ +H++
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
I R+ NV + ++DMY KCGSI++A++VFE P R WN++I A NG A
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+ F+K+ S L+PD VS +GVLTAC H G +++ YF M Y I P KHY CM++
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP-GDAG 454
+LG+ + M PD W S+L++CR H N +A+RAA+K+ ++ DA
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAA 657
Query: 455 GYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 514
YV MSN+ AA+ ++E+ + + M+E +K P S +E+ ++H F + + HP E
Sbjct: 658 AYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDE 717
Query: 515 IYSLLND 521
I +N+
Sbjct: 718 IVRKINE 724
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 182/412 (44%), Gaps = 34/412 (8%)
Query: 37 QIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q+HA +K G + + S VL ++ A ++F +P + ++NT+I G+ +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+I LF+ M S QP T+ V KA L G QLH V G +D +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N I+ Y+ + E + +FDE ELD
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDF------------------------------- 316
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V++N +IS Y + + + +L F MQ G + F ++L+ A+L SLQ G +H
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ + V +++DMY KC E A +F+ P+R W ++I G G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
++ F+K++ SNL+ D+ +F VL A ++ K + ++ + +E ++ + +V+
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVD 495
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
+ + + M + +A +W +L+S+ +G+ E A A K+ +
Sbjct: 496 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
D ++ R++K G + D SN I+ G +S A++V+DE + ++ N+MI G
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM--QEEGVEPSEFTM 253
K G + +R LF+ M RT VTW ++ Y RN EA ++F M P T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELN--VIVLTAIIDMYCKCGSIENAIEVFERN 311
+LL C VH++ + F+ N + V ++ YC+ ++ A +FE
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 312 PRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
P + +N++I G +G E++ F K++ S +P +F GVL A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 264/506 (52%), Gaps = 43/506 (8%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS-PNLY 84
C +K+ +Q+H ++K G D + ++ + + ++ A +F + N+
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD-ALRLFKEIGCVGNVV 363
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
SW +I GF ++ + A+ LF +M V+P + TY + A + +++H +V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQV 419
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
VK E+ + ++ Y K GK++E+
Sbjct: 420 VKTNYERSSTVGTALLDAYV-------------------------------KLGKVEEAA 448
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL- 263
++F+ + + V W++M++GY + G + A+++F + + G++P+EFT S+LN CA
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
S+ G+ H + ++ + ++ V +A++ MY K G+IE+A EVF+R + L WNS+I
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI 383
G A +G +A++ F +++ +K D V+FIGV AC H G ++E + YF +MV +I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 384 EPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAST-WGSLLSSCRKHGNVEIAKRAA 442
P+ +H +CMV++ + I+ M NP ST W ++L++CR H E+ + AA
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMP-NPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 443 QKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEF 502
+K+ + P D+ YVL+SN+ A S ++E + R LM E +KEPG S IE+ + + F
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 747
Query: 503 LAGGRLHPKTQEIYSLLNDPGFAFQD 528
LAG R HP +IY L D +D
Sbjct: 748 LAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 187/405 (46%), Gaps = 41/405 (10%)
Query: 36 QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+Q+H IK G D + S V T+ S + VF M N+ +W T+I G++
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGS--NFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
R+S ++LF+ M QP T+ + A+ G G G Q+H VVK GL+K
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+SN++I++Y G + +A+ +FD+ V+ NSM
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM------------------------ 266
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
ISGY NG EAL +F +M+ V SE + S++ CA+L L+ E +H
Sbjct: 267 -------ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG-LSCWNSIIIGLAMNGHER 333
+ + F + + TA++ Y KC ++ +A+ +F+ G + W ++I G N +
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
EAV+ FS+++ ++P+ ++ +LTA L I ++ + ++ YE ++ T +
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSSTVG--TAL 434
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
++ + G+ + D W ++L+ + G E A
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 31/313 (9%)
Query: 52 IAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC 111
+A R+ F SS + A+ +F + P + S+ +++ GFSR Q A LF+++
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 112 SEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSE 171
++ + SV K A L G QLH + +K G D + +++ Y
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM------- 139
Query: 172 AKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRL 231
K + R++F+ M R VTW ++ISGY RN
Sbjct: 140 ------------------------KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMN 175
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAI 291
E L +F MQ EG +P+ FT + L A G G VH+ + +N + + V ++
Sbjct: 176 DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 292 IDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDR 351
I++Y KCG++ A +F++ + + WNS+I G A NG + EA+ F ++ + ++
Sbjct: 236 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSE 295
Query: 352 VSFIGVLTACKHL 364
SF V+ C +L
Sbjct: 296 SSFASVIKLCANL 308
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 252/493 (51%), Gaps = 36/493 (7%)
Query: 14 KFISDQPCLTMLQNHCTT---MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINY 70
K D TM C + ++ + + + G +D S VL G ++
Sbjct: 111 KIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNL-YMKCGKMDE 169
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A ++F +M ++ W T++ GF+++ A+ + +M ++ + +A
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
LG G +HG + + GL + + +++ MYA
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA-------------------------- 263
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
K G I+ + R+F+ M +TAV+W S+ISG+ +NG +A E MQ G +P
Sbjct: 264 -----KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T+V +L AC+ +GSL+ G VH YI + + L+ + TA++DMY KCG++ ++ E+FE
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEH 377
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
R+ L CWN++I ++G+ +E V F K+ SN++PD +F +L+A H G +++
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
+++FS+M+N Y+I+PS KHY C++++L + I ++ W +LLS C
Sbjct: 438 QHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCI 497
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
H N+ + AA K+ QL+P G L+SN A +NK++E + R LM+ EK PG
Sbjct: 498 NHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGY 557
Query: 491 SSIELYGEVHEFL 503
S+IE+ GE+ FL
Sbjct: 558 SAIEVNGELRTFL 570
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 166/350 (47%), Gaps = 31/350 (8%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
+ LQ+ + QIHA +I TG + + SR L G+I+YA VF +P
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQR 79
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ +N++I +SR P + L+ M+ ++QP T+ KA G +
Sbjct: 80 GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW 139
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
+ V G + D F+ ++++++Y KCGK+D
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYM-------------------------------KCGKMD 168
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
E+ LF MA R + W +M++G+ + G+ +A+E + MQ EG M+ LL A
Sbjct: 169 EAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
LG + G VH Y+ R +NV+V T+++DMY K G IE A VF R + W S
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
+I G A NG +A E ++QS +PD V+ +GVL AC +G++ +
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 8/258 (3%)
Query: 194 LAKCGKIDE---SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
+A CG+I E +R++F+ + R +NSMI Y R E L ++ M E ++P
Sbjct: 57 IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDS 116
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T + AC L+ GE V ++ +V V ++++++Y KCG ++ A +F +
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGK 176
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+R + CW +++ G A G +AVEF+ ++Q+ DRV +G+L A LG
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
+ + + ++ T +V++ + M A +WGSL+S
Sbjct: 237 RSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLISGFA 294
Query: 431 KHGNVEIAKRAAQKVCQL 448
++G +A +A + V ++
Sbjct: 295 QNG---LANKAFEAVVEM 309
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 161/550 (29%), Positives = 269/550 (48%), Gaps = 47/550 (8%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D L ++ C + F + H +I+ GL + + +LT +G + AY +
Sbjct: 157 DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTL-YPKAGRMGDAYNL 215
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F MP N SWN +I+GFS+ + A+ +F M E +P ++T+ SV ++Q G
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 135 HD-----------------------------------GAQLHGRVVKLGLEKDQFISNTI 159
D ++HG V+K G E+ N +
Sbjct: 276 EDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNAL 335
Query: 160 IHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM--------A 211
IH+Y G + +A+ +F + + + NS+I GK+DE+ LF+ +
Sbjct: 336 IHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
VTW S+I G GR ++LE F MQ V + T+ +L+ CA L +L G
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGRE 455
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
+H ++ R + N++V A+++MY KCG + VFE + L WNSII G M+G
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF 515
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
+A+ F ++ SS PD ++ + VL+AC H G +++ + F M + +EP +HY
Sbjct: 516 AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA 575
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
C+V++LG+ +K M + P G+LL+SCR H NV+IA+ A ++ L+P
Sbjct: 576 CIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPE 635
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPK 511
G Y+L+SN+ +A ++EE+ R L K+ +K G S IE+ + ++F +G + +
Sbjct: 636 RTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSE 695
Query: 512 TQEIYSLLND 521
+ IY +L D
Sbjct: 696 FETIYPVLED 705
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
++ +I +YA GLL +A+ VF E V L +++ RL
Sbjct: 91 LAANLISVYARLGLLLDARNVF-ETVSLVLLS----------------DLRL-------- 125
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
WNS++ V +G + ALE++ M++ G+ + + +L AC +LG H+
Sbjct: 126 ---WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHT 182
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ + + N+ V+ ++ +Y K G + +A +F P R WN +I G +
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
AV+ F +Q KPD V++ VL+ G ++ YF LM
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 264/494 (53%), Gaps = 37/494 (7%)
Query: 28 HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSS--GDINYAYMVFTRMPSPNLYS 85
H + + +++H + +K ++ + A+ F AS + G ++YA VF + S + S
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVAN---AFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
WN +I G ++S+ P+ ++ + M S + P T S+ A ++L + G ++HG ++
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
+ LE+D F+ +++ +Y + CG++ +
Sbjct: 524 RNWLERDLFVYLSVLSLYIH-------------------------------CGELCTVQA 552
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
LF+ M ++ V+WN++I+GY++NG AL VF M G++ +M+ + AC+ L S
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
L+ G H+Y ++ E + + ++IDMY K GSI + +VF + + WN++I+G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
++G +EA++ F ++Q + PD ++F+GVLTAC H G I E Y M +++ ++P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXI-KGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
++KHY C++++LG+ + + M+ D W SLLSSCR H N+E+ ++ A K
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ +L+P YVL+SN+ A K+E+ + R M E K+ GCS IEL +V F+
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 505 GGRLHPKTQEIYSL 518
G R +EI SL
Sbjct: 853 GERFLDGFEEIKSL 866
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 39/326 (11%)
Query: 45 TGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAIS 104
T L +D + +R++T A G + + VF + S NL+ WN +I +SR+ +
Sbjct: 114 TRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 105 LFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMY 163
F++M+ +++ P TYP V KA A + G +HG VVK GL +D F+ N ++ Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 164 ANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMIS 223
G +++A ++FD E ++++ NSMI R+F++
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMI-------------RVFSD-------------- 265
Query: 224 GYVRNGRLKEALEVFSNMQEEGVE----PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
NG +E+ + M EE + P T+V++L CA + G+ VH + +
Sbjct: 266 ----NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 280 NFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFF 339
+ +++ A++DMY KCG I NA +F+ N + + WN+++ G + G +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 340 SKLQSS--NLKPDRVSFIGVLTACKH 363
++ + ++K D V+ + + C H
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 157/361 (43%), Gaps = 44/361 (12%)
Query: 20 PCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFT 76
PC+ C M D +H ++KTGL D + +++F + G + A +F
Sbjct: 191 PCVI---KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF-YGTHGFVTDALQLFD 246
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML----CSEVQPQKLTYPSVFKAYAQLG 132
MP NL SWN++IR FS + + + L +M+ P T +V A+
Sbjct: 247 IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARER 306
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G +HG VKL L+K+ ++N ++ MY+
Sbjct: 307 EIGLGKGVHGWAVKLRLDKELVLNNALMDMYS---------------------------- 338
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE--EGVEPSE 250
KCG I ++ +F + V+WN+M+ G+ G +V M E V+ E
Sbjct: 339 ---KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T+++ + C H L + +H Y + F N +V A + Y KCGS+ A VF
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ ++ WN++I G A + R +++ +++ S L PD + +L+AC L ++
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 371 K 371
K
Sbjct: 516 K 516
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 253/485 (52%), Gaps = 33/485 (6%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
++HA++IK G ++ L S Y F RM +L SW T+I G++++
Sbjct: 407 ELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
A+ LF D+ ++ ++ S+ +A + L + ++H +++ GL D I
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 524
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N ++ +Y KC + + R+F ++ + V
Sbjct: 525 NELVDVYG-------------------------------KCRNMGYATRVFESIKGKDVV 553
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+W SMIS NG EA+E+F M E G+ ++ +L+A A L +L G +H Y+
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
R F L + A++DMY CG +++A VF+R R+GL + S+I M+G + AV
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
E F K++ N+ PD +SF+ +L AC H G +DE + + +M + YE+EP +HY C+V++
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGY 456
LG+ +K M P A W +LL++CR H EI + AAQ++ +L+P + G
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 457 VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
VL+SNV A ++ + + R MK + EK PGCS IE+ G+VH+F A + HP+++EIY
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Query: 517 SLLND 521
L++
Sbjct: 854 EKLSE 858
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 206/484 (42%), Gaps = 79/484 (16%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H+ I KT + + + L F G ++ A VF MP ++WNT+I +
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL------ 149
+ P A++L+ +M V ++P++ KA A+L G++LH +VKLG
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 150 --------------------------EKDQFISNTIIHMYANSGLLSEAKRVFDE----- 178
+ D + N+I+ Y+ SG E +F E
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 179 -------------------------KVELDVI----------ACNSMIMGLAKCGKIDES 203
++ V+ CN++I +CGK+ ++
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339
Query: 204 RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
R+ M VTWNS+I GYV+N KEALE FS+M G + E +M S++ A L
Sbjct: 340 ERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
+L G +H+Y+ ++ ++ N+ V +IDMY KC F R + L W ++I
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI 383
G A N EA+E F + ++ D + +L A L ++ K ++ +
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 384 EPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN----VEIAK 439
+ I++ +V+V G+ + + D +W S++SS +GN VE+ +
Sbjct: 520 DTVIQNE--LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 440 RAAQ 443
R +
Sbjct: 577 RMVE 580
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 157/322 (48%), Gaps = 32/322 (9%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
++IHA ++K+ + L + G + A + +M + ++ +WN++I+G+ +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + A+ F DM+ + + +++ S+ A +L G +LH V+K G + + +
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
NT+I MY+ L + MG R F M +
Sbjct: 424 GNTLIDMYSKCNL--------------------TCYMG-----------RAFLRMHDKDL 452
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
++W ++I+GY +N EALE+F ++ ++ +E E + S+L A + L S+ + +H +
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
I R L+ ++ ++D+Y KC ++ A VFE + + W S+I A+NG+E EA
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 336 VEFFSKLQSSNLKPDRVSFIGV 357
VE F ++ + L D V+ + +
Sbjct: 572 VELFRRMVETGLSADSVALLCI 593
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 262/502 (52%), Gaps = 17/502 (3%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H + + + + + ++ A G ++ A VF+ M ++ SWN ++ G+S+
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKC-GMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ A+ LF M +++ +T+ + YAQ G G++ + +++ G++ ++
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 156 SNTIIHMYANSGLLSEAKRV--FDEKVELDV---------IACNSMIMGLAKCGKIDESR 204
+++ A+ G L K + + K +D+ + N +I AKC K+D +R
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 205 RLFNNMAA--RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE--PSEFTMVSLLNAC 260
+F++++ R VTW MI GY ++G +ALE+ S M EE + P+ FT+ L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 261 AHLGSLQHGEWVHSYIRRNNFE-LNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
A L +L+ G+ +H+Y RN + + V +IDMY KCGSI +A VF+ + W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
S++ G M+G+ EA+ F +++ K D V+ + VL AC H G ID+ YF+ M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
+ + P +HY C+V++LG+ I+ M + P W + LS CR HG VE+ +
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEV 499
AA+K+ +L G Y L+SN+ A + ++++ R LM+ +K PGCS +E
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 500 HEFLAGGRLHPKTQEIYSLLND 521
F G + HP +EIY +L D
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLD 749
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 196/473 (41%), Gaps = 86/473 (18%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPN--LYSW 86
C T+ + IH ++ G+ ++ + + T+ S G +++A + R P + +Y W
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYI--SVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
N++IR + + + LF M P T+P VFKA ++ + G H +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
G + F+ N ++ MY+ LS+A++VFDE DV++ NS+I AK GK
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP------ 209
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE-GVEPSEFTMVSLLNACAHLGS 265
K ALE+FS M E G P T+V++L CA LG+
Sbjct: 210 -------------------------KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
G+ +H + + N+ V ++DMY KCG ++ A VF + + WN+++ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 326 LAMNGHEREAVEFFSKLQ-----------------------------------SSNLKPD 350
+ G +AV F K+Q SS +KP+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 351 RVSFIGVLTACKHLGAIDEA--------KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXX 402
V+ I VL+ C +GA+ KY L N + E + + ++++ +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKK 422
Query: 403 XXXXXXXIKGMTINP-DASTWGSLLSSCRKHGN----VEIAKRAAQKVCQLDP 450
++ D TW ++ +HG+ +E+ ++ CQ P
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 244/490 (49%), Gaps = 34/490 (6%)
Query: 34 DF-QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRG 92
DF +QIHAH+I+ GL + + ++ G + A VF +M + ++ G
Sbjct: 201 DFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC-GWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
++++ + A+ LFVD++ V+ + V KA A L + G Q+H V KLGLE +
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+ ++ Y KC + + R F +
Sbjct: 320 VSVGTPLVDFY-------------------------------IKCSSFESACRAFQEIRE 348
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP-SEFTMVSLLNACAHLGSLQHGEW 271
V+W+++ISGY + + +EA++ F +++ + + FT S+ AC+ L G
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VH+ + + + +A+I MY KCG +++A EVFE + W + I G A G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
EA+ F K+ S +KP+ V+FI VLTAC H G +++ K+ M+ Y + P+I HY
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
CM+++ + +K M PDA +W LS C H N+E+ + A +++ QLDP
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPK 511
D GYVL N+ + K+EEA E LM E +KE CS I+ G++H F+ G + HP+
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 648
Query: 512 TQEIYSLLND 521
TQEIY L +
Sbjct: 649 TQEIYEKLKE 658
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 162/384 (42%), Gaps = 44/384 (11%)
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
+F M N S T+I ++ A+ LF ML S +P Y ++ K+ A
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G Q+H V++ GL + I I++MY
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYV----------------------------- 230
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
KCG + ++R+F+ MA + V ++ GY + GR ++AL++F ++ EGVE F
Sbjct: 231 --KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
+L ACA L L G+ +H+ + + E V V T ++D Y KC S E+A F+
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP-DRVSFIGVLTACKHLGAIDEAKY 372
W++II G EAV+ F L+S N + ++ + AC L +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN---- 404
Query: 373 YFSLMVNAYEIEPSI--KHY--TCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSS 428
V+A I+ S+ Y + ++ + + + M NPD W + +S
Sbjct: 405 -IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
Query: 429 CRKHGNVEIAKRAAQKV--CQLDP 450
+GN A R +K+ C + P
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKP 486
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
++ +L EA E M + GV S ++ L AC L SL HG +H +R +V+
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN 346
+ ++ MYC+C S+E+A ++F+ ++I A G +AV FS + +S
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 347 LKPDRVSFIGVLTACKHLGAID 368
KP + +L + + A+D
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALD 201
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 254/502 (50%), Gaps = 32/502 (6%)
Query: 46 GLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISL 105
G+A + + + G I A +F RM N+ +W +I G+ ++ + L
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 106 FVDMLC-SEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA 164
F+ M +V+ T +FKA +G+Q+HG V ++ LE D F+ N+++ MY+
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 165 NSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV-------- 216
G + EAK VF D ++ NS+I GL + +I E+ LF M + V
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKG 381
Query: 217 -----------------------TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
TW +MIS +V NG +EAL F M ++ V P+ +T
Sbjct: 382 FSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTF 441
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
S+L+A A L L G +H + + N ++ V +++ MYCKCG+ +A ++F
Sbjct: 442 SSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE 501
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ +N++I G + NG ++A++ FS L+SS +P+ V+F+ +L+AC H+G +D Y
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKY 561
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F M ++Y IEP HY CMV++LG+ I M P + WGSLLS+ + H
Sbjct: 562 FKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHL 621
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
V++A+ AA+K+ +L+P A YV++S + + K + + K +K+PG S I
Sbjct: 622 RVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Query: 494 ELYGEVHEFLAGGRLHPKTQEI 515
L GEVH FLAG +EI
Sbjct: 682 ILKGEVHNFLAGDESQLNLEEI 703
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 12/317 (3%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
+ +G ++ A+ VF MP S+N +I ++ + ++ C + ++Y
Sbjct: 92 AENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCD---LGKAYELFCDIPEKNAVSYA 148
Query: 123 SVFKAYAQLGAGHDGAQLHGRV-VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE 181
++ + + G + L+ VK +D SN ++ Y +G +EA RVF
Sbjct: 149 TMITGFVRAGRFDEAEFLYAETPVKF---RDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+V++C+SM+ G K G+I ++R LF+ M R +TW +MI GY + G ++ +F M
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 242 QEEG-VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
++EG V+ + T+ + AC + G +H + R E ++ + +++ MY K G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ A VF + WNS+I GL EA E F K+ D VS+ ++
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKG 381
Query: 361 CKHLGAIDEAKYYFSLM 377
G I + F +M
Sbjct: 382 FSGKGEISKCVELFGMM 398
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 110/238 (46%), Gaps = 27/238 (11%)
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F N+ I +A +G L EA+ +F + +++ +MI A+ GK+ ++ ++F+ M R
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR 110
Query: 214 TAVTWNSMISGYVRNG-RLKEALEVFSNMQEEGV----------------EPSEF----T 252
++N+MI+ ++N L +A E+F ++ E+ + +EF T
Sbjct: 111 VTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAET 170
Query: 253 MVSLLNACAH----LGSLQHGEWVHSYIRRNNFELN-VIVLTAIIDMYCKCGSIENAIEV 307
V ++ A G L+ G+W + + V+ ++++ YCK G I +A +
Sbjct: 171 PVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSL 230
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHL 364
F+R R + W ++I G G + F ++ Q ++K + + + AC+
Sbjct: 231 FDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDF 288
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 37 QIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
QIH ++K + +D + S V +C G+ N AY +F+ + PN+ S+NT+I G+S
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYC--KCGNTNDAYKIFSCISEPNIVSYNTMISGYSY 516
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+ + A+ LF + S +P +T+ ++ A +G
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 243/487 (49%), Gaps = 33/487 (6%)
Query: 34 DFQQ-IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRG 92
DF + +H I+KT D +L + GD++ A+ VF MP ++ W+ +I
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQL-YTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
F ++ A+ LF+ M + V P + T S+ A G QLHG VVK+G + D
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
++SN +I +YA KC K+D + +LF +++
Sbjct: 383 IYVSNALIDVYA-------------------------------KCEKMDTAVKLFAELSS 411
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+ V+WN++I GY G +A +F V +E T S L ACA L S+ G V
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H + N V V ++IDMY KCG I+ A VF ++ WN++I G + +G
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
R+A+ ++ + KP+ ++F+GVL+ C + G ID+ + F M+ + IEP ++HYTC
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
MV +LG+ I+G+ P W ++LS+ N E A+R+A+++ +++P D
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKD 651
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
YVL+SN+ A + ++ R MKE +KEPG S IE G+VH F G HP
Sbjct: 652 EATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDM 711
Query: 513 QEIYSLL 519
+ I +L
Sbjct: 712 KLINGML 718
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ IH I+K G D A + +L + D + A +F MP N S+ T+ +G++
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD-ALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ----LHGRVVKLGLEK 151
Q I L+ + + +L P VF ++ +L D A+ LH +VKLG +
Sbjct: 127 ---CQDPIGLYSRL---HREGHELN-PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+ F+ +I+ Y+ CG +D +R +F +
Sbjct: 180 NAFVGAALINAYS-------------------------------VCGSVDSARTVFEGIL 208
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
+ V W ++S YV NG +++L++ S M+ G P+ +T + L A LG+ +
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VH I + + L+ V ++ +Y + G + +A +VF P+ + W+ +I NG
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
EAV+ F +++ + + P+ + +L C
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
LD+ A N ++ K G ++ LF+ M R V++ ++ GY ++ + ++S +
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRL 137
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
EG E + S L L + W+HS I + ++ N V A+I+ Y CGS+
Sbjct: 138 HREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
++A VFE + + W I+ NG+ ++++ S ++ + P+ +F L A
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 362 KHLGAIDEAK-YYFSLMVNAYEIEPSI 387
LGA D AK + ++ Y ++P +
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRV 284
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 272/553 (49%), Gaps = 80/553 (14%)
Query: 25 LQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
L C ++ +QI A + L H + L A GD NY+ +F+ PN Y
Sbjct: 43 LLKKCISVNQLRQIQAQM----LLHS-VEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHY 97
Query: 85 SWNTIIRGFSRS-STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
S+N +IRG + + + + A+SL+ M S ++P K TY VF A A+L G +H
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 144 VVKLGLEKDQFIS-------------------------------NTIIHMYANSGLLSEA 172
+ K+GLE+D I+ N++I Y+ +G +A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 173 KRVF----------DE-----------------------------KVELDVIACNSMIMG 193
+F DE K+ L + +I
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
KCG +D +RR+FN M + V W +MI+ Y +NG+ EA ++F M++ GV P T+
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
++L+AC +G+L+ G+ + ++ + + N+ V T ++DMY KCG +E A+ VFE P
Sbjct: 338 STVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ + WN++I A GH +EA+ F ++ ++ P ++FIGVL+AC H G + + Y
Sbjct: 398 KNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRY 454
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
F M + + + P I+HYT ++++L + ++ PD ++L +C K
Sbjct: 455 FHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRK 514
Query: 434 NVEIAKRAAQKVCQL-DPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
+V I ++A + + ++ + +AG YV+ SNV A ++E+ + R LM++ K PGCS
Sbjct: 515 DVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSW 574
Query: 493 IELYGEVHEFLAG 505
IE+ GE+ EFLAG
Sbjct: 575 IEIEGELMEFLAG 587
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 138/333 (41%), Gaps = 56/333 (16%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVL---TFCASS------- 64
F D+ L + C+ + D ++TG + +A ++ + TF S
Sbjct: 229 FEPDERTLVSMLGACSHLGD--------LRTGRLLEEMAITKKIGLSTFLGSKLISMYGK 280
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
GD++ A VF +M + +W +I +S++ A LF +M + V P T +V
Sbjct: 281 CGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTV 340
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
A +GA G Q+ +L L+ + +++ ++ MY G + EA RVF+
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA------ 394
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
M + TWN+MI+ Y G KEAL +F M
Sbjct: 395 -------------------------MPVKNEATWNAMITAYAHQGHAKEALLLFDRMS-- 427
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
V PS+ T + +L+AC H G + G + H + T IID+ + G ++
Sbjct: 428 -VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDE 486
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
A E ER P + + I+G H+R+ V
Sbjct: 487 AWEFMERFPGKPDEIMLAAILGAC---HKRKDV 516
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 254/502 (50%), Gaps = 37/502 (7%)
Query: 25 LQNHC---TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L N C ++D Q++HAH+IKT +R+L F + A V MP
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC-LEDARKVLDEMPEK 116
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
N+ SW +I +S++ A+++F +M+ S+ +P + T+ +V + + G Q+H
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G +VK + F+ ++++ MYA K G+I
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYA-------------------------------KAGQIK 205
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
E+R +F + R V+ ++I+GY + G +EALE+F + EG+ P+ T SLL A +
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
L L HG+ H ++ R ++ ++IDMY KCG++ A +F+ P R WN+
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 322 IIIGLAMNGHEREAVEFFSKLQS-SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV-N 379
+++G + +G RE +E F ++ +KPD V+ + VL+ C H D F MV
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG 385
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
Y +P +HY C+V++LG+ IK M P A GSLL +CR H +V+I +
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEV 499
+++ +++P +AG YV++SN+ A++ ++ + R +M + KEPG S I+ +
Sbjct: 446 SVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTL 505
Query: 500 HEFLAGGRLHPKTQEIYSLLND 521
H F A R HP+ +E+ + + +
Sbjct: 506 HYFHANDRTHPRREEVLAKMKE 527
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 222 ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
IS NGRL+EAL M G E +LLNAC +L+ G+ VH+++ + +
Sbjct: 27 ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 282 ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
+ T ++ Y KC +E+A +V + P + + W ++I + GH EA+ F++
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 342 LQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
+ S+ KP+ +F VLT+C + K L+V
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 246/468 (52%), Gaps = 41/468 (8%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G ++ A +F +MP N+ SW T+I G ++ A+ LF +ML ++ + V
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
A A A H G Q+HG ++KLG ++++S ++I YAN
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN-------------------- 272
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
C +I +SR++F+ W +++SGY N + ++AL +FS M
Sbjct: 273 -----------CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
+ P++ T S LN+C+ LG+L G+ +H + E + V +++ MY G++ +A+
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
VF + ++ + WNSII+G A +G + A F ++ N +PD ++F G+L+AC H G
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 366 AIDEAK---YYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
+++ + YY S +N I+ I+HYTCMV++LG+ I+ M + P+ W
Sbjct: 442 FLEKGRKLFYYMSSGIN--HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVW 499
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
+LLS+CR H +V+ ++AA + LD + YVL+SN+ A++ ++ + R+ MK+N
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKN 559
Query: 483 FTEKEPGCSSIELYGEVHEFLAG-----GRLHPKTQEIYSLLNDPGFA 525
K+PG S + + G+ HEF +G R++ K + + L + G+A
Sbjct: 560 GIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYA 607
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 155/307 (50%), Gaps = 8/307 (2%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
S I+ A VF ++PSP++ + +I G++RS+ A++LF +M +V +++ S+
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSM 103
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
+ G + +L + E+ +++ SG + +A+R+F + D
Sbjct: 104 ISGCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
A NSM+ G + GK+D++ +LF M + ++W +MI G +N R EAL++F NM
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
++ + ++ ACA+ + G VH I + F V ++I Y C I ++
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
+VF+ ++ W +++ G ++N +A+ FS + +++ P++ +F L +C L
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 365 GAIDEAK 371
G +D K
Sbjct: 340 GTLDWGK 346
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 136/276 (49%), Gaps = 34/276 (12%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+H IIK G ++ ++ ++TF A+ I + VF + W ++ G+S +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCK-RIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
+ A+S+F ML + + P + T+ S + + LG G ++HG VKLGLE D F+
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N+++ MY++SG +++A VF + + +++ NS+I+G A+
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ-------------------- 404
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+GR K A +F M EP E T LL+AC+H G L+ G + Y+
Sbjct: 405 -----------HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 277 RR--NNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
N+ + + T ++D+ +CG ++ A E+ ER
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 174 RVFDEKVEL---DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGR 230
R F VE +V+ CN ++ +IDE+R +FN + + + MI+GY R+ R
Sbjct: 27 RSFSVTVEFQNREVLICNHLL-----SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNR 81
Query: 231 LKEALEVFSNMQ---------------------------EEGVEPSEFTMVSLLNACAHL 263
L +AL +F M +E E S + +++N C
Sbjct: 82 LVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRS 141
Query: 264 GSLQHGEWVHSYIRRNNFELNV---IVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
G + E R +++ V +++ Y + G +++A+++F++ P + + W
Sbjct: 142 GKVDQAE-------RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWT 194
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
++I GL N EA++ F + +K F V+TAC
Sbjct: 195 TMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 27 NHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNL 83
N C+ + +++H +K GL D + ++ S SG++N A VF ++ ++
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM-YSDSGNVNDAVSVFIKIFKKSI 392
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
SWN+II G ++ ++A +F M+ +P ++T+ + A + G G +L
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-- 450
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES 203
++S+ I H+ D K++ M+ L +CGK+ E+
Sbjct: 451 ---------YYMSSGINHI--------------DRKIQ----HYTCMVDILGRCGKLKEA 483
Query: 204 RRLFNNMAAR-TAVTWNSMISG 224
L M + + W +++S
Sbjct: 484 EELIERMVVKPNEMVWLALLSA 505
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 256/522 (49%), Gaps = 64/522 (12%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+++ +++H HI +G + +R+L A G + A VF MP+ +L SWN ++
Sbjct: 101 LEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC-GSLVDARKVFDEMPNRDLCSWNVMVN 159
Query: 92 GFSRSSTPQFAISLFVDM--------------LCSEVQPQKL------------TYPSVF 125
G++ + A LF +M + QP++ + P++F
Sbjct: 160 GYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 126 KAYAQLGAG------HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK 179
+ A G ++HG +V+ GL+ D+ + ++++ MY
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG--------------- 264
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
KCG IDE+R +F+ + + V+W SMI Y ++ R +E +FS
Sbjct: 265 ----------------KCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 240 NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCG 299
+ P+E+T +LNACA L + + G+ VH Y+ R F+ ++++DMY KCG
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
Query: 300 SIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLT 359
+IE+A V + P+ L W S+I G A NG EA+++F L S KPD V+F+ VL+
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 360 ACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDA 419
AC H G +++ +F + + + + HYTC+V++L + I M + P
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSK 488
Query: 420 STWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILM 479
W S+L C +GN+++A+ AAQ++ +++P + YV M+N+ AA+ K+EE + R M
Sbjct: 489 FLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Query: 480 KENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
+E K PG S E+ + H F+A HP +I L +
Sbjct: 549 QEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRE 590
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 179/360 (49%), Gaps = 5/360 (1%)
Query: 107 VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS 166
V +L +P TY ++ + +Q A +G ++H + G I N ++ MYA
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
G L +A++VFDE D+ + N M+ G A+ G ++E+R+LF+ M + + +W +M++GYV
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 227 RNGRLKEALEVFSNMQE-EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
+ + +EAL ++S MQ P+ FT+ + A A + ++ G+ +H +I R + +
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 286 IVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS 345
++ ++++DMY KCG I+ A +F++ + + W S+I + RE FS+L S
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 346 NLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXX 405
+P+ +F GVL AC L + K M +P + +V++ +
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIES 372
Query: 406 XXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAA 465
+ G PD +W SL+ C ++G + A + + L G +V NV +A
Sbjct: 373 AKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL--LKSGTKPDHVTFVNVLSA 429
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 251/490 (51%), Gaps = 10/490 (2%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH +IK G ++ L + ++ G I+ A VF + N +N+++ G
Sbjct: 159 KQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ A+ LF M + +++ ++ K AQ G + + + GL+ DQ+
Sbjct: 218 CGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 156 SNTIIHMYANSGLLSEAKRV----FDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+++ G ++E K++ + + +++I KC + ++ +F+ M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
+ V+W +M+ GY + GR +EA+++F +MQ G++P +T+ ++ACA++ SL+ G
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
H + V V +++ +Y KCG I+++ +F R W +++ A G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
E ++ F K+ LKPD V+ GV++AC G +++ + YF LM + Y I PSI HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
CM+++ + I GM PDA W +LLS+CR GN+EI K AA+ + +LDP
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPK 511
GY L+S++ A+ K++ + R M+E +KEPG S I+ G++H F A P
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 512 TQEIYSLLND 521
+IY+ L +
Sbjct: 633 LDQIYAKLEE 642
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 227/454 (50%), Gaps = 39/454 (8%)
Query: 58 LTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCS-EVQP 116
L S +G I+ F ++P + +WN +I G+S S A+ + M+
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 117 QKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVF 176
++T ++ K + G G Q+HG+V+KLG E + + +++MYAN G +S+AK+VF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 177 DEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALE 236
+ + + NS++ GL CG I+++ +LF M + +V+W +MI G +NG KEA+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 237 VFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYC 296
F M+ +G++ ++ S+L AC LG++ G+ +H+ I R NF+ ++ V +A+IDMYC
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 297 KCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIG 356
KC + A VF+R ++ + W ++++G G EAV+ F +Q S + PD +
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 357 VLTACKHLGAIDEAK------------YYFSL---MVNAY----EIEPSIK--------- 388
++AC ++ +++E +Y ++ +V Y +I+ S +
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 389 --HYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQ 443
+T MV Q M + PD T ++S+C + G VE +R +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 444 KVCQ---LDPGDAGGYVLMSNVQAASNKFEEAME 474
+ + P G Y M ++ + S + EEAM
Sbjct: 497 LMTSEYGIVP-SIGHYSCMIDLFSRSGRLEEAMR 529
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 66/362 (18%)
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+HG +++ + F+ N I+H YA + A+RVFD + ++ + N++++ +K G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE-GVEPSEFTMVSLLN 258
I E F + R VTWN +I GY +G + A++ ++ M + + T++++L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCK--------------------- 297
+ G + G+ +H + + FE ++V + ++ MY
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 298 ----------CGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
CG IE+A+++F + +S W ++I GLA NG +EA+E F +++ L
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 348 KPDRVSFIGVLTACKHLGAIDEAK---------------YYFSLMVNAY----------- 381
K D+ F VL AC LGAI+E K Y S +++ Y
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 382 ----EIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGN 434
+ ++ +T MV GQ M I+PD T G +S+C +
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 435 VE 436
+E
Sbjct: 387 LE 388
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 248/460 (53%), Gaps = 9/460 (1%)
Query: 68 INYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA 127
I A+ VF +P ++ S +I F + S A F +LC ++P + T+ +V +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 128 YAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC 187
G QLH +K+GL + F+ + +++ Y L++A+R FD+ + +V++
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
++I G K + +E+ LF M R+ VTWN++I G+ + GR +EA+ F +M EGV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 248 -PSEFTMVSLLNACAHLGSLQHGEWVHS-YIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
P+E T + A +++ S G+ +H+ I+ NV V ++I Y KCG++E+++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 306 EVFER--NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACK 362
F + +R + WNS+I G A NG EAV F K+ + +NL+P+ V+ +GVL AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSI---KHYTCMVEVLGQXXXXXXXXXXIKGMTINPDA 419
H G I E YF+ VN Y+ +P++ +HY CMV++L + IK M ++P
Sbjct: 343 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 420 STWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILM 479
W +LL C+ H N +AK AA K+ +LDP D YV++SN +A ++ R M
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 480 KENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
KE ++ GCS IE+ ++ F+ + + E+Y +L
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 79/368 (21%)
Query: 30 TTMKDFQ---QIHAHIIKTGLAHDHIAASRVLT------------FCASSSGDINY---- 70
TT +D + Q+H + +K GLA + S VL C + D N
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 71 --------------AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQ- 115
A +F MP ++ +WN +I GFS++ + A++ FVDML V
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 116 PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK-LGLEKDQFISNTIIHMYANSGLLSEAKR 174
P + T+P A + + + G +H +K LG + F+ N++I Y+ G + ++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 175 VFD--EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLK 232
F+ E+ + ++++ NSMI G A NGR +
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYA-------------------------------HNGRGE 312
Query: 233 EALEVFSNM-QEEGVEPSEFTMVSLLNACAHLGSLQHG-----EWVHSYIRRNNFELNVI 286
EA+ +F M ++ + P+ T++ +L AC H G +Q G + V+ Y N EL
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE-- 370
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNP-RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS 345
++DM + G + A E+ + P G+ W +++ G ++ ++R A SK+
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILE- 429
Query: 346 NLKPDRVS 353
L P VS
Sbjct: 430 -LDPRDVS 436
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 41/288 (14%)
Query: 163 YANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA----RTAVTW 218
+ +S L+ A +VFDE ELDVI+ ++I K + E+ + F + T+
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR 278
++I + +K ++ + G+ + F ++LN L +L R
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR- 155
Query: 279 NNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE- 337
+ NV+ +T +I Y K E A+ +F P R + WN++I G + G EAV
Sbjct: 156 ---DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
F L+ + P+ +F +TA ++ + K SI + C ++ L
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGK--------------SI--HACAIKFL 256
Query: 398 GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
G+ + W SL+S K GN+E + A K+
Sbjct: 257 GKRF----------------NVFVWNSLISFYSKCGNMEDSLLAFNKL 288
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 244/470 (51%), Gaps = 28/470 (5%)
Query: 29 CTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C+ ++D Q +H ++KTG ++ S L G++NY VF +P N+ +
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGF-EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W ++I GF ++ AI F +M + V+ + + A + G HG +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
LG + F KV +VI S+I AKCG + +R
Sbjct: 236 GLGFDP-----------------------YFQSKVGFNVILATSLIDMYAKCGDLRTARY 272
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
LF+ M RT V+WNS+I+GY +NG +EAL +F +M + G+ P + T +S++ A G
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGC 332
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
Q G+ +H+Y+ + F + ++ A+++MY K G E+A + FE ++ W +IIG
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 326 LAMNGHEREAVEFFSKLQ-SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
LA +GH EA+ F ++Q N PD ++++GVL AC H+G ++E + YF+ M + + +E
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P+++HY CMV++L + +K M + P+ + WG+LL+ C H N+E+ R
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
V + + +G YVL+SN+ A + ++ + R MK +K G SS+E
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 185/362 (51%), Gaps = 47/362 (12%)
Query: 19 QPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDIN--YAYMVFT 76
+P L+ L+N C ++ + Q+H +IK+ + + I SR++ FC + +N YA VF
Sbjct: 7 KPILSQLEN-CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
+ P++Y WN++IRG+S S P A+ + +ML P T+P V KA + L
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G+ +HG VVK G E + ++S ++HMY G ++ RVF++ + +V+A
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA---------- 175
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
W S+ISG+V N R +A+E F MQ GV+ +E MV L
Sbjct: 176 ---------------------WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDL 214
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFE--------LNVIVLTAIIDMYCKCGSIENAIEVF 308
L AC + G+W H +++ F+ NVI+ T++IDMY KCG + A +F
Sbjct: 215 LVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLF 274
Query: 309 ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA-----CKH 363
+ P R L WNSII G + NG EA+ F + + PD+V+F+ V+ A C
Sbjct: 275 DGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQ 334
Query: 364 LG 365
LG
Sbjct: 335 LG 336
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%)
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
+R +F ++ + WNSMI GY + +AL + M +G P FT +L AC+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
L +Q G VH ++ + FE+N+ V T ++ MY CG + + VFE P+ + W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
I G N +A+E F ++QS+ +K + + +L AC I K++ +
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 264/505 (52%), Gaps = 38/505 (7%)
Query: 18 DQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D LT + + C + D + IHA++I TG A D I+ LT ++G A +
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD-ISVCNSLTQMYLNAGSWREAEKL 354
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F+RM ++ SW T+I G+ + P AI + M V+P ++T +V A A LG
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G +LH +K L ++N +I+MY+
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYS------------------------------ 444
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
KC ID++ +F+N+ + ++W S+I+G N R EAL +F + ++P+ T+
Sbjct: 445 -KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLT 502
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
+ L ACA +G+L G+ +H+++ R L+ + A++DMY +CG + A F + ++
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKK 561
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
++ WN ++ G + G VE F ++ S ++PD ++FI +L C + + YF
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
S M + Y + P++KHY C+V++LG+ I+ M + PD + WG+LL++CR H
Sbjct: 622 SKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK 680
Query: 435 VEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
+++ + +AQ + +LD G Y+L+ N+ A K+ E + R +MKEN + GCS +E
Sbjct: 681 IDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Query: 495 LYGEVHEFLAGGRLHPKTQEIYSLL 519
+ G+VH FL+ + HP+T+EI ++L
Sbjct: 741 VKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 32/316 (10%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSV 124
G++ A+ VF +M NL+SWN ++ G+++ A+ L+ ML V+P T+P V
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
+ + G ++H VV+ G E D + N +I MY
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY--------------------- 241
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
KCG + +R LF+ M R ++WN+MISGY NG E LE+F M+
Sbjct: 242 ----------VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL 291
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
V+P T+ S+++AC LG + G +H+Y+ F +++ V ++ MY GS A
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
++F R R+ + W ++I G N +A++ + + ++KPD ++ VL+AC L
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 365 GAIDEAKYYFSLMVNA 380
G +D L + A
Sbjct: 412 GDLDTGVELHKLAIKA 427
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 33/348 (9%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP 79
PC+ + +++H H+++ G D + ++T GD+ A ++F RMP
Sbjct: 200 PCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC-GDVKSARLLFDRMP 258
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
++ SWN +I G+ + + LF M V P +T SV A LG G
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H V+ G D + N++ MY N+ G
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNA-------------------------------GS 347
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
E+ +LF+ M + V+W +MISGY N +A++ + M ++ V+P E T+ ++L+A
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
CA LG L G +H + VIV +I+MY KC I+ A+++F PR+ + W
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
SII GL +N EA+ F +++ + L+P+ ++ L AC +GA+
Sbjct: 468 TSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGAL 514
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 12/209 (5%)
Query: 169 LSEAKRVFDEKVELDVIACNSM-----------IMGLAKCGKIDESRRLFNNMAARTAVT 217
L E KR +E ++ IA +SM + + G + ++ +F M+ R +
Sbjct: 103 LCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS 162
Query: 218 WNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
WN ++ GY + G EA+ ++ M GV+P +T +L C + L G+ VH ++
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
R +EL++ V+ A+I MY KCG +++A +F+R PRR + WN++I G NG E +
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
E F ++ ++ PD ++ V++AC+ LG
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 222 ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
+ G NG+L+EA+++ ++MQE V E V+L+ C + + G V+S +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 282 ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
L V + A + M+ + G++ +A VF + R L WN ++ G A G+ EA+ + +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 342 -LQSSNLKPDRVSFIGVLTAC 361
L +KPD +F VL C
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC 206
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 266/508 (52%), Gaps = 41/508 (8%)
Query: 20 PCLTMLQN--HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
P LT+L + C +K Q+HA ++K GL H+ I + + G ++ A VF
Sbjct: 208 PLLTLLDDPMFCNLLK---QVHAKVLKLGLQHE-ITICNAMISSYADCGSVSDAKRVFDG 263
Query: 78 MP-SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
+ S +L SWN++I GFS+ + A LF+ M V+ TY + A + G H
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--GEEHQ 321
Query: 137 --GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G LHG V+K GLE+ +N +I MY
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQ----------------------------- 352
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
G ++++ LF ++ ++ ++WNS+I+G+ + G ++A++ FS ++ ++ ++
Sbjct: 353 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 412
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPR 313
+LL +C+ L +LQ G+ +H+ ++ F N V++++I MY KCG IE+A + F++ + +
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
WN++I+G A +G + +++ FS++ + N+K D V+F +LTAC H G I E
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+LM Y+I+P ++HY V++LG+ I+ M +NPD + L CR G
Sbjct: 533 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 592
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
+E+A + A + +++P D YV +S++ + K+EE + +MKE +K PG S I
Sbjct: 593 EIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLND 521
E+ +V F A R +P Q+IY ++ D
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKD 680
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 169/410 (41%), Gaps = 78/410 (19%)
Query: 35 FQQI---HAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
FQ++ H + IK G D ++R+L G + YA M+F MP + SWNT+I
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILD-SYIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
G++ + A LF M S ++ + K A + G Q+HG V+K G E
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+ ++ ++++ MYA + +A F E E + ++ N++I G + I + L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 212 ARTAVTW----------------------------------------NSMISGYVRNGRL 231
+ AVT N+MIS Y G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 232 KEA--------------------------------LEVFSNMQEEGVEPSEFTMVSLLNA 259
+A E+F MQ VE +T LL+A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCK--CGSIENAIEVFERNPRRGLS 317
C+ G+ +H + + E A+I MY + G++E+A+ +FE + L
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
WNSII G A G +AV+FFS L+SS +K D +F +L +C L +
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATL 424
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 237/458 (51%), Gaps = 32/458 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H + +K+GL D S + T S G + +Y +F +P + W ++I GF+
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTL-YSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ AI LF +ML P + T +V + + G ++HG ++ G++K +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+ +++MY+ G L A++V+D ELD ++C+S+I G
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG---------------------- 626
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
Y ++G +++ +F +M G F + S+L A A G VH+Y
Sbjct: 627 ---------YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
I + V ++++ MY K GSI++ + F + L W ++I A +G EA
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
++ ++ ++ KPD+V+F+GVL+AC H G ++E+ ++ + MV Y IEP +HY CMV+
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
LG+ I M I PDA WG+LL++C+ HG VE+ K AA+K +L+P DAG
Sbjct: 798 ALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGA 857
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
Y+ +SN+ A +++E E R LMK +KEPG SS+
Sbjct: 858 YISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 194/413 (46%), Gaps = 68/413 (16%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+ A +IK G A D + ++ A G + A VF+R+P+P++ SW ++ G+++S+
Sbjct: 273 VQARVIKCG-AEDVFVCTAIVDLYAKC-GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN 157
A+ +F +M S V+ T SV A + + +Q+H V K G D ++
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 158 TIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVT 217
+I MY+ SG + +++VF+ +LD I +++
Sbjct: 391 ALISMYSKSGDIDLSEQVFE---DLDDIQRQNIV-------------------------- 421
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
N MI+ + ++ + +A+ +F+ M +EG+ EF++ SLL+ L L G+ VH Y
Sbjct: 422 -NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTL 477
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE 337
++ L++ V +++ +Y KCGS+E + ++F+ P + +CW S+I G G+ REA+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
FS++ PD + VLT C ++ K ++ Y + I
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK-----EIHGYTLRAGID--------- 583
Query: 398 GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP 450
KGM + +L++ K G++++A++ ++ +LDP
Sbjct: 584 -------------KGMDLG------SALVNMYSKCGSLKLARQVYDRLPELDP 617
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 52/405 (12%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSW-NTIIRGFSR 95
Q+HA + K+G D A+ +++ S SGDI+ + VF + + N +I FS+
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISM-YSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQ 430
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
S P AI LF ML ++ + + S+ L G Q+HG +K GL D +
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGK---QVHGYTLKSGLVLDLTV 487
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+++ +Y+ KCG ++ES +LF + +
Sbjct: 488 GSSLFTLYS-------------------------------KCGSLEESYKLFQGIPFKDN 516
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
W SMISG+ G L+EA+ +FS M ++G P E T+ ++L C+ SL G+ +H Y
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
R + + + +A+++MY KCGS++ A +V++R P +S+I G + +G ++
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE------IEPSI-K 388
F + S D + +L A DE+ V+AY EPS+
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKAA---ALSDESS--LGAQVHAYITKIGLCTEPSVGS 691
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
M G I G PD W +L++S +HG
Sbjct: 692 SLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHG 732
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 35/298 (11%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
AY VF S N+Y WNTII G R+ LF +M +P TY SV A A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
L G + RV+K G E D F+ I+ +YA G ++EA V
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV--------------- 307
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
F+ + + V+W M+SGY ++ ALE+F M+ GVE +
Sbjct: 308 ----------------FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T+ S+++AC + VH+++ ++ F L+ V A+I MY K G I+ + +VFE
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 311 -NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA--CKHLG 365
+ + + N +I + + +A+ F+++ L+ D S +L+ C +LG
Sbjct: 412 LDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 37/357 (10%)
Query: 14 KFISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
+F +DQ + ++ + + AH+++ L + ++ L S+SG + A
Sbjct: 51 RFFNDQS-----NSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAK 105
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
+F +P P++ S N +I G+ + + ++ F M + +++Y SV A + L A
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQA 165
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
+ +K+G + + + +I +++ + +A +VF + + +V
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYC------- 218
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
WN++I+G +RN ++F M +P +T
Sbjct: 219 ------------------------WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
S+L ACA L L+ G+ V + + + E +V V TAI+D+Y KCG + A+EVF R P
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ W ++ G + A+E F +++ S ++ + + V++AC + EA
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 69/365 (18%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
LT+ +H ++ ++IH + ++ G+ S ++ S G + A V+ R+P
Sbjct: 558 LTVCSSH-PSLPRGKEIHGYTLRAGIDKGMDLGSALVNM-YSKCGSLKLARQVYDRLPEL 615
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ S +++I G+S+ Q LF DM+ S S+ KA A GAQ+H
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
+ K+GL + + ++++ MY+ G + + + F + D+IA ++I A+ GK +
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
EAL+V++ M+E+G +P + T V +L+AC+
Sbjct: 736 -------------------------------EALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
H G + + F LN +V + IE R+ +
Sbjct: 765 HGG----------LVEESYFHLNSMVK-------------DYGIEPENRH-------YVC 794
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAY 381
++ L +G REA F + + ++KPD + + +L ACK G ++ K A
Sbjct: 795 MVDALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGKV---AAKKAI 848
Query: 382 EIEPS 386
E+EPS
Sbjct: 849 ELEPS 853
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 215/386 (55%), Gaps = 32/386 (8%)
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G +H V++ G ++ N+++H+YAN
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYAN------------------------------- 35
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
CG + + ++F+ M + V WNS+I+G+ NG+ +EAL +++ M +G++P FT+VSL
Sbjct: 36 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L+ACA +G+L G+ VH Y+ + N+ ++D+Y +CG +E A +F+ +
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSN-LKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
W S+I+GLA+NG +EA+E F ++S+ L P ++F+G+L AC H G + E YF
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
M Y+IEP I+H+ CMV++L + IK M + P+ W +LL +C HG+
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
++A+ A ++ QL+P +G YVL+SN+ A+ ++ + + R M + +K PG S +E+
Sbjct: 276 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLLND 521
VHEFL G + HP++ IY+ L +
Sbjct: 336 GNRVHEFLMGDKSHPQSDAIYAKLKE 361
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 37/318 (11%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ IH+ +I++G I L ++ GD+ AY VF +MP +L +WN++I GF+
Sbjct: 8 ETIHSVVIRSGFG-SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ P+ A++L+ +M ++P T S+ A A++GA G ++H ++K+GL ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
SN ++ +YA G + EAK +FDE V+ + ++ S+I+GLA
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV------------------- 167
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMVSLLNACAHLGSLQHG-EWVH 273
NG KEA+E+F M+ EG+ P E T V +L AC+H G ++ G E+
Sbjct: 168 ------------NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR-GLSCWNSIIIGLAMNGHE 332
E + ++D+ + G ++ A E + P + + W +++ ++G
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Query: 333 REAVEFFSKLQSSNLKPD 350
A F+++Q L+P+
Sbjct: 276 DLAE--FARIQILQLEPN 291
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%)
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
+ ++ GE +HS + R+ F + V +++ +Y CG + +A +VF++ P + L WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
I G A NG EA+ ++++ S +KPD + + +L+AC +GA+ K M+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 246/463 (53%), Gaps = 35/463 (7%)
Query: 47 LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS---WNTIIRGFSRSSTPQFAI 103
L H+ S+++T S ++ A +F + +L + W + G+SR+ +P+ A+
Sbjct: 163 LRHNPKLLSKLITL-FSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 104 SLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMY 163
++VDMLCS ++P + KA L G +H ++VK + DQ + N ++ +Y
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 164 ANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMIS 223
SGL D++R++F+ M+ R VTWNS+IS
Sbjct: 282 MESGLF-------------------------------DDARKVFDGMSERNVVTWNSLIS 310
Query: 224 GYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL 283
+ R+ E +F MQEE + S T+ ++L AC+ + +L G+ +H+ I ++ +
Sbjct: 311 VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 284 NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ 343
+V +L +++DMY KCG +E + VF+ + L+ WN ++ A+NG+ E + F +
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 344 SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
S + PD ++F+ +L+ C G + F M + + P+++HY C+V++LG+
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKI 490
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQ 463
I+ M P AS WGSLL+SCR HGNV + + AA+++ L+P + G YV++SN+
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 464 AASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
A + ++ + R +MK+ +KE GCS +++ ++ F+AGG
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGG 593
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 215/384 (55%), Gaps = 6/384 (1%)
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS--MIMGLAK 196
Q H ++ KLG + + + Y A+R+ + L CN +I L K
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMVS 255
G+ ++++ N + + +TWN MI GYVRN + +EAL+ NM ++P++F+ S
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L ACA LG L H +WVHS + + ELN I+ +A++D+Y KCG I + EVF R
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+S WN++I G A +G EA+ FS++++ ++ PD ++F+G+LT C H G ++E K YF
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
LM + I+P ++HY MV++LG+ I+ M I PD W SLLSS R + N
Sbjct: 291 LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNP 350
Query: 436 EIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
E+ + A Q + + GD YVL+SN+ +++ K+E A + R LM + K G S +E
Sbjct: 351 ELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEF 407
Query: 496 YGEVHEFLAGGRLHPKTQEIYSLL 519
G +H F AG H +T+ IY +L
Sbjct: 408 GGMIHRFKAGDTSHIETKAIYKVL 431
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC-SEVQPQKLTYPSV 124
G+ A V N+ +WN +I G+ R+ + A+ +ML ++++P K ++ S
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
A A+LG H +H ++ G+E + +S+ ++ +YA G + ++ VF DV
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
N+MI G A +G EA+ VFS M+ E
Sbjct: 232 SIWNAMITGFAT-------------------------------HGLATEAIRVFSEMEAE 260
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
V P T + LL C+H G L+ G E+ RR + + + A++D+ + G ++
Sbjct: 261 HVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 320
Query: 304 AIEVFERNP-RRGLSCWNSII 323
A E+ E P + W S++
Sbjct: 321 AYELIESMPIEPDVVIWRSLL 341
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 254/476 (53%), Gaps = 10/476 (2%)
Query: 25 LQNHCTTM--KDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPN 82
LQ H + K ++IHA IIKTG D + S L G ++YA VF +P P
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPD-LNISIKLLILHLKCGCLSYARQVFDELPKPT 99
Query: 83 LYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ--- 139
L ++N +I G+ + + + L M S + T V KA G+ +
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 140 --LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
+H R++K +E D + ++ Y SG L A+ VF+ + +V+ C SMI G
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRL-KEALEVFSNMQEEGVEPSEFTMVSL 256
G ++++ +FN + V +N+M+ G+ R+G K +++++ +MQ G P+ T S+
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
+ AC+ L S + G+ VH+ I ++ ++ + ++++DMY KCG I +A VF++ + +
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL 376
W S+I G NG+ EA+E F++++ ++P+ V+F+G L+AC H G +D+ F
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 377 MVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE 436
M Y ++P ++HY C+V+++G+ + M PD+ W +LLSSC HGNVE
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 437 IAKRAAQKVCQLDPGD-AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
+A AA ++ +L+ G Y+ +SNV A+++K++ + R +MK K G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 258/486 (53%), Gaps = 33/486 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH +I++ ++ D S ++ G ++ A +F++ S ++ + +I G+
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRG-VSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ ++ +F ++ ++ P ++T S+ L A G +LHG ++K G + I
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+I MYA KCG+++ + +F ++ R
Sbjct: 479 GCAVIDMYA-------------------------------KCGRMNLAYEIFERLSKRDI 507
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+WNSMI+ ++ A+++F M G+ ++ + L+ACA+L S G+ +H +
Sbjct: 508 VSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGF 567
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ +++ +V + +IDMY KCG+++ A+ VF+ + + WNSII +G +++
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 336 VEFFSKL-QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
+ F ++ + S ++PD+++F+ ++++C H+G +DE +F M Y I+P +HY C+V
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 395 EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAG 454
++ G+ +K M PDA WG+LL +CR H NVE+A+ A+ K+ LDP ++G
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSG 747
Query: 455 GYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 514
YVL+SN A + ++E + R LMKE +K PG S IE+ H F++G HP++
Sbjct: 748 YYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSH 807
Query: 515 IYSLLN 520
IYSLLN
Sbjct: 808 IYSLLN 813
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 38/355 (10%)
Query: 16 ISDQPCLTMLQNHCTTMKDFQQIH---AHIIKTGLAHDHIAASRVLTFCASSSGDINYAY 72
+S PCL C +K+F+ I + G+ + AS ++ G I+
Sbjct: 138 VSTFPCLV---KACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK-AYLEYGKIDVPS 193
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+F R+ + WN ++ G+++ I F M ++ P +T+ V A
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G QLHG VV G++ + I N+++ MY+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS---------------------------- 285
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
KCG+ D++ +LF M+ VTWN MISGYV++G ++E+L F M GV P T
Sbjct: 286 ---KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
SLL + + +L++ + +H YI R++ L++ + +A+ID Y KC + A +F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+ + ++I G NG +++E F L + P+ ++ + +L L A+
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 39/356 (10%)
Query: 22 LTMLQNHCTT---MKDFQQIHAHIIKTGLAHDHIAASRVL---TFCASSSGDINYAYMVF 75
L++L C+ ++ +Q+HA +I ++ D R+L C S S Y +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
R S + WN+II F R+ A++ + MLC V P T+P + KA L
Sbjct: 98 LRRSS--IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
L V LG++ ++F+++++I Y G
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG---------------------------- 187
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
KID +LF+ + + V WN M++GY + G L ++ FS M+ + + P+ T
Sbjct: 188 ---KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDC 244
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+L+ CA + G +H + + + + +++ MY KCG ++A ++F R
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
WN +I G +G E++ FF ++ SS + PD ++F +L + ++ K
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 36/286 (12%)
Query: 191 IMGL-AKCGKIDESRRLFNNMAARTAVT--WNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
I+G+ A CG + ++F + R + WNS+IS +VRNG L +AL + M GV
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P T L+ AC L + + +++ + + N V +++I Y + G I+ ++
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
F+R ++ WN ++ G A G ++ FS ++ + P+ V+F VL+ C I
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 368 DEAKYYFSL-MVNAYEIEPSIKH-----------------------------YTCMVEVL 397
D L +V+ + E SIK+ + CM+
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 398 GQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKR 440
Q M + PDA T+ SLL S K N+E K+
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 248/497 (49%), Gaps = 36/497 (7%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C T F++ +H ++ +GL ++ I + +++ G+++ + V +MP ++ +
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI-GEMSESRRVLLQMPRRDVVA 430
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD-GAQLHGRV 144
WN +I G++ P A++ F M V +T SV A G + G LH +
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
V G E D+ + N++I MYA KCG + S+
Sbjct: 491 VSAGFESDEHVKNSLITMYA-------------------------------KCGDLSSSQ 519
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
LFN + R +TWN+M++ +G +E L++ S M+ GV +F+ L+A A L
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 579
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G+ +H + FE + + A DMY KCG I +++ + R L WN +I
Sbjct: 580 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 639
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
L +G+ E F ++ +KP V+F+ +LTAC H G +D+ Y+ ++ + +E
Sbjct: 640 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 699
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P+I+H C++++LG+ I M + P+ W SLL+SC+ HGN++ ++AA+
Sbjct: 700 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 759
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ +L+P D YVL SN+ A + ++E+ R M +K+ CS ++L +V F
Sbjct: 760 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 819
Query: 505 GGRLHPKTQEIYSLLND 521
G R HP+T EIY+ L D
Sbjct: 820 GDRTHPQTMEIYAKLED 836
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + H K + IH ++K G + +L A + + A +VF +MP+
Sbjct: 267 LLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTK 325
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+L SWN+++ F A+ L M+ S +T+ S A G LH
Sbjct: 326 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 385
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G VV GL +Q I N ++ MY K G++
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYG-------------------------------KIGEMS 414
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
ESRR+ M R V WN++I GY + +AL F M+ EGV + T+VS+L+AC
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 262 HLGSL-QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
G L + G+ +H+YI FE + V ++I MY KCG + ++ ++F R + WN
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 534
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
+++ A +GH E ++ SK++S + D+ SF L+A L ++E + L V
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-- 592
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM---TINPDASTWGSLLSSCRKHGNVE 436
+ +H + + + M ++N +W L+S+ +HG E
Sbjct: 593 ---KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+H + K+GL D ++ +L G ++ + VF MP N+ SW +++ G+S
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVY-GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 138
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
P+ I ++ M V + + V + L G Q+ G+VVK GLE +
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N++I M L G +D + +F+ M+ R +
Sbjct: 199 NSLISM-------------------------------LGSMGNVDYANYIFDQMSERDTI 227
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+WNS+ + Y +NG ++E+ +FS M+ E + T+ +LL+ H+ + G +H +
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+ F+ V V ++ MY G A VF++ P + L WNS++ +G +A+
Sbjct: 288 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 347
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTAC 361
+ SS + V+F L AC
Sbjct: 348 GLLCSMISSGKSVNYVTFTSALAAC 372
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 192/433 (44%), Gaps = 40/433 (9%)
Query: 18 DQPCLTMLQNHCTTMKD---FQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
++ ++++ + C +KD +QI ++K+GL +A L S G+++YA +
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYI 217
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F +M + SWN+I ++++ + + +F M + T ++ +
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G +HG VVK+G + + NT++ MYA +
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA---------------------------- 309
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
G+ E+ +F M + ++WNS+++ +V +GR +AL + +M G + T
Sbjct: 310 ---GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
S L AC + G +H + + N I+ A++ MY K G + + V + PRR
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG-AIDEAKYY 373
+ WN++I G A + +A+ F ++ + + ++ + VL+AC G ++ K
Sbjct: 427 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Query: 374 FSLMVNA-YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+ +V+A +E + +K+ ++ + + G+ N + TW ++L++ H
Sbjct: 487 HAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 543
Query: 433 GNVEIAKRAAQKV 445
G+ E + K+
Sbjct: 544 GHGEEVLKLVSKM 556
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 35/308 (11%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G + A +F MP N SWNT++ G R + F M ++P S+
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 126 KAYAQLGAG-HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
A + G+ +G Q+HG V K GL D ++S I+H+Y
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG-------------------- 105
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
+ GL C SR++F M R V+W S++ GY G +E ++++ M+ E
Sbjct: 106 ------VYGLVSC-----SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 154
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
GV +E +M ++++C L G + + ++ E + V ++I M G+++ A
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
+F++ R WNSI A NGH E+ FS ++ + D V+ V T L
Sbjct: 215 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH---DEVNSTTVSTLLSVL 271
Query: 365 GAIDEAKY 372
G +D K+
Sbjct: 272 GHVDHQKW 279
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 3/246 (1%)
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
K G++ +R LF+ M R V+WN+M+SG VR G E +E F M + G++PS F + S
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 256 LLNACAHLGSL-QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
L+ AC GS+ + G VH ++ ++ +V V TAI+ +Y G + + +VFE P R
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYF 374
+ W S+++G + G E ++ + ++ + + S V+++C L +
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
+V + +E + ++ +LG M+ D +W S+ ++ ++G+
Sbjct: 184 GQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGH 241
Query: 435 VEIAKR 440
+E + R
Sbjct: 242 IEESFR 247
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 248/497 (49%), Gaps = 36/497 (7%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C T F++ +H ++ +GL ++ I + +++ G+++ + V +MP ++ +
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI-GEMSESRRVLLQMPRRDVVA 413
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD-GAQLHGRV 144
WN +I G++ P A++ F M V +T SV A G + G LH +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
V G E D+ + N++I MYA KCG + S+
Sbjct: 474 VSAGFESDEHVKNSLITMYA-------------------------------KCGDLSSSQ 502
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
LFN + R +TWN+M++ +G +E L++ S M+ GV +F+ L+A A L
Sbjct: 503 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 562
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G+ +H + FE + + A DMY KCG I +++ + R L WN +I
Sbjct: 563 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 622
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
L +G+ E F ++ +KP V+F+ +LTAC H G +D+ Y+ ++ + +E
Sbjct: 623 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 682
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P+I+H C++++LG+ I M + P+ W SLL+SC+ HGN++ ++AA+
Sbjct: 683 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 742
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ +L+P D YVL SN+ A + ++E+ R M +K+ CS ++L +V F
Sbjct: 743 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 802
Query: 505 GGRLHPKTQEIYSLLND 521
G R HP+T EIY+ L D
Sbjct: 803 GDRTHPQTMEIYAKLED 819
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + H K + IH ++K G + +L A + + A +VF +MP+
Sbjct: 250 LLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTK 308
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+L SWN+++ F A+ L M+ S +T+ S A G LH
Sbjct: 309 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 368
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G VV GL +Q I N ++ MY K G++
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYG-------------------------------KIGEMS 397
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
ESRR+ M R V WN++I GY + +AL F M+ EGV + T+VS+L+AC
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 262 HLGSL-QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
G L + G+ +H+YI FE + V ++I MY KCG + ++ ++F R + WN
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 517
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
+++ A +GH E ++ SK++S + D+ SF L+A L ++E + L V
Sbjct: 518 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-- 575
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM---TINPDASTWGSLLSSCRKHGNVE 436
+ +H + + + M ++N +W L+S+ +HG E
Sbjct: 576 ---KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+H + K+GL D ++ +L G ++ + VF MP N+ SW +++ G+S
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVY-GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
P+ I ++ M V + + V + L G Q+ G+VVK GLE +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N++I M L G +D + +F+ M+ R +
Sbjct: 182 NSLISM-------------------------------LGSMGNVDYANYIFDQMSERDTI 210
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+WNS+ + Y +NG ++E+ +FS M+ E + T+ +LL+ H+ + G +H +
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+ F+ V V ++ MY G A VF++ P + L WNS++ +G +A+
Sbjct: 271 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 330
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTAC 361
+ SS + V+F L AC
Sbjct: 331 GLLCSMISSGKSVNYVTFTSALAAC 355
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 192/433 (44%), Gaps = 40/433 (9%)
Query: 18 DQPCLTMLQNHCTTMKD---FQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
++ ++++ + C +KD +QI ++K+GL +A L S G+++YA +
Sbjct: 142 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYI 200
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F +M + SWN+I ++++ + + +F M + T ++ +
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
G +HG VVK+G + + NT++ MYA +
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA---------------------------- 292
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
G+ E+ +F M + ++WNS+++ +V +GR +AL + +M G + T
Sbjct: 293 ---GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
S L AC + G +H + + N I+ A++ MY K G + + V + PRR
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG-AIDEAKYY 373
+ WN++I G A + +A+ F ++ + + ++ + VL+AC G ++ K
Sbjct: 410 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Query: 374 FSLMVNA-YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+ +V+A +E + +K+ ++ + + G+ N + TW ++L++ H
Sbjct: 470 HAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 526
Query: 433 GNVEIAKRAAQKV 445
G+ E + K+
Sbjct: 527 GHGEEVLKLVSKM 539
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG-HD 136
MP N SWNT++ G R + F M ++P S+ A + G+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G Q+HG V K GL D ++S I+H+Y + GL
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYG--------------------------VYGLVS 94
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
C SR++F M R V+W S++ GY G +E ++++ M+ EGV +E +M +
Sbjct: 95 C-----SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
+++C L G + + ++ E + V ++I M G+++ A +F++ R
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
WNSI A NGH E+ FS ++ + D V+ V T LG +D K+
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFH---DEVNSTTVSTLLSVLGHVDHQKW 262
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 259/511 (50%), Gaps = 36/511 (7%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYA 71
F +D LT + C ++ + QIHA I+ G+ D S ++ A GD+ A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC-GDLRMA 241
Query: 72 YMVFTRMPSPNLYS-------------------------------WNTIIRGFSRSSTPQ 100
+ ++ P+ +S WN++I G+ ++
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 101 FAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTII 160
A+ LF +M +E + T +V A LG G Q+H K GL D +++T++
Sbjct: 302 EALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 161 HMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNS 220
MY+ G EA ++F E D I NSMI CG+ID+++R+F + ++ ++WNS
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
M +G+ +NG E LE F M + + E ++ S+++ACA + SL+ GE V +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG 480
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFS 340
+ + +V +++ID+YCKCG +E+ VF+ + WNS+I G A NG EA++ F
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQX 400
K+ + ++P +++F+ VLTAC + G ++E + F M + P +H++CMV++L +
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 401 XXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMS 460
++ M + D S W S+L C +G + K+AA+K+ +L+P ++ YV +S
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 461 NVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
+ A S +E + R LM+EN K PG S
Sbjct: 661 AIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 183/344 (53%), Gaps = 35/344 (10%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
+ +G+++ A +F MP ++ + N+++ G+ + + A+ LF ++ +T
Sbjct: 135 AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLT 191
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+V KA A+L A G Q+H +++ G+E D ++++++++YA G L A + ++ E
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
D + +++I G A CG+++ESR LF+ + R + WNSMISGY+ N EAL +F+ M+
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS-- 300
E E S T+ +++NAC LG L+ G+ +H + + +++V + ++DMY KCGS
Sbjct: 312 NETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 301 -----------------------------IENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
I++A VFER + L WNS+ G + NG
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
E +E+F ++ +L D VS V++AC + +++ + F+
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 44/273 (16%)
Query: 139 QLHGRVVKLGL---------EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS 189
Q++ R K+G+ +++ F NT+I Y NSG + R FD E D + N
Sbjct: 70 QMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV 129
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
++ G AK G++ +RRLFN M + VT NS++ GY+ NG +EAL +F +E
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF---KELNFSAD 186
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYI---------RRNNFELNVIV------------- 287
T+ ++L ACA L +L+ G+ +H+ I + N+ +NV
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 288 ---------LTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEF 338
L+A+I Y CG + + +F+R R + WNS+I G N + EA+
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 339 FSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
F+++++ + D + V+ AC LG ++ K
Sbjct: 307 FNEMRNET-REDSRTLAAVINACIGLGFLETGK 338
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 260/499 (52%), Gaps = 39/499 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
QQIH +K G+ + ++ S L + +G +N +F+ MP + SWN+II +R
Sbjct: 435 QQIHGESLKLGIDLN-VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 96 S--STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
S S P+ A+ F++ + + ++T+ SV A + L G G Q+HG +K + +
Sbjct: 494 SERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
N +I Y KCG++D ++F+ MA R
Sbjct: 553 TTENALIACYG-------------------------------KCGEMDGCEKIFSRMAER 581
Query: 214 TA-VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
VTWNSMISGY+ N L +AL++ M + G F ++L+A A + +L+ G V
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H+ R E +V+V +A++DMY KCG ++ A+ F P R WNS+I G A +G
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQG 701
Query: 333 REAVEFFSKLQ-SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
EA++ F ++ PD V+F+GVL+AC H G ++E +F M ++Y + P I+H++
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSS-CRKHG-NVEIAKRAAQKVCQLD 449
CM +VLG+ I+ M + P+ W ++L + CR +G E+ K+AA+ + QL+
Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
Query: 450 PGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLH 509
P +A YVL+ N+ AA ++E+ ++ R MK+ +KE G S + + VH F+AG + H
Sbjct: 822 PENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSH 881
Query: 510 PKTQEIYSLLNDPGFAFQD 528
P IY L + +D
Sbjct: 882 PDADVIYKKLKELNRKMRD 900
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 46/330 (13%)
Query: 35 FQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+QI I K+GL D S +++ A S G ++YA VF +M + N + N ++ G
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKS-GSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 95 RSSTPQFAISLFVDMLCS-EVQPQKLTYPSVFKAYAQLGAGHD-----GAQLHGRVVKLG 148
R + A LF+DM +V P+ +Y + ++ + + G ++HG V+ G
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 149 LEKDQF-ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
L I N +++MYA KCG I ++RR+F
Sbjct: 344 LVDFMVGIGNGLVNMYA-------------------------------KCGSIADARRVF 372
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
M + +V+WNSMI+G +NG EA+E + +M+ + P FT++S L++CA L +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
G+ +H + +LNV V A++ +Y + G + ++F P WNSII LA
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 328 MNGHER---EAVEFFSKLQSSNLKPDRVSF 354
+ ER EAV F Q + K +R++F
Sbjct: 493 RS--ERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 174 RVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKE 233
R++ +++ DV CN++I + G +R++F+ M R V+W ++SGY RNG KE
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS--LQHGEWVHSYIRRNNFELNVIVLTAI 291
AL +M +EG+ +++ VS+L AC +GS + G +H + + ++ ++ +V +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 292 IDMYCKC-GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
I MY KC GS+ A+ F + WNSII + G +R A FS +Q +P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 351 RVSFIG-VLTAC 361
+F V TAC
Sbjct: 206 EYTFGSLVTTAC 217
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 40/337 (11%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH + K A D + ++ +++ G + YA F + N SWN+II +S+
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG--AQLHGRVVKLGLEKDQ 153
+ + A +F M +P + T+ S+ L Q+ + K GL D
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+ + ++ +A SG LS A++VF N M R
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVF-------------------------------NQMETR 272
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN-----ACAHLGSLQH 268
AVT N ++ G VR +EA ++F +M ++ S + V LL+ + A L+
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKK 331
Query: 269 GEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
G VH ++ + V + +++MY KCGSI +A VF + WNS+I GL
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
NG EAVE + ++ ++ P + I L++C L
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
+GD A VF MP N SW I+ G+SR+ + A+ DM+ + + + SV
Sbjct: 49 TGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSV 108
Query: 125 FKAYAQLGAGHD--GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+A ++G+ G Q+HG + KL D +SN +I MY
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK----------------- 151
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
C + G A C F ++ + +V+WNS+IS Y + G + A +FS+MQ
Sbjct: 152 ----CIGSV-GYALCA--------FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 243 EEGVEPSEFTMVSLLNACAHLG--SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
+G P+E+T SL+ L ++ E + I+++ ++ V + ++ + K GS
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS 344
+ A +VF + R N +++GL EA + F + S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
+S + +C +G + HS + +N + +V + +I+ Y + G +A +VF+ P
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
R W I+ G + NG +EA+ F + + ++ +F+ VL AC+ +G++
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 241/472 (51%), Gaps = 62/472 (13%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L L ++CT++ ++IH I + SR+L P
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFR----------SRILD-------------------QYP 80
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ WN I+R + R +P AI +++ M+ S V P + + P V KA Q+ G +LH
Sbjct: 81 IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELH 140
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
V+LG D+F + I +Y K G+ +
Sbjct: 141 SVAVRLGFVGDEFCESGFITLYC-------------------------------KAGEFE 169
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
+R++F+ R +WN++I G GR EA+E+F +M+ G+EP +FTMVS+ +C
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 262 HLGSLQHGEWVHSYIRRNNFE--LNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
LG L +H + + E ++++L ++IDMY KCG ++ A +FE +R + W
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
+S+I+G A NG+ EA+E F +++ ++P++++F+GVL+AC H G ++E K YF++M +
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
+E+EP + HY C+V++L + ++ M + P+ WG L+ C K G+VE+A+
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
A + +L+P + G YV+++NV A +++ R LMK K P S
Sbjct: 410 WVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 16 ISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYA 71
+ D+ L ++ + DF +++H+ ++ G D S +T +C +G+ A
Sbjct: 114 LPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYC--KAGEFENA 171
Query: 72 YMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQL 131
VF P L SWN II G + + A+ +FVDM S ++P T SV + L
Sbjct: 172 RKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL 231
Query: 132 GAGHDGAQLHGRVVKLGLEK--DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS 189
G QLH V++ E+ D + N++I MY G + A +F+E + +V++ +S
Sbjct: 232 GDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSS 291
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
MI+ GY NG EALE F M+E GV P+
Sbjct: 292 MIV-------------------------------GYAANGNTLEALECFRQMREFGVRPN 320
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENAIEV 307
+ T V +L+AC H G ++ G+ + + ++ FEL + I+D+ + G ++ A +V
Sbjct: 321 KITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHER 333
E P + N ++ G M G E+
Sbjct: 380 VEEMPMKP----NVMVWGCLMGGCEK 401
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 256/505 (50%), Gaps = 41/505 (8%)
Query: 22 LTMLQNHCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRM 78
L+ + C MK +H ++K G+ + ++ A+ S + A ++F +
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 79 PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC--SEVQPQKLTYPSVFKAYAQLGAGHD 136
N +W T+I GF+ + ++ ML +EV P +T +A A + +
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTT 231
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G Q+H V+K G + + + N+I+ +Y +
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYC-------------------------------R 260
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
CG + E++ F+ M + +TWN++IS R+ EAL +F + +G P+ +T SL
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSL 319
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF-ERNPRRG 315
+ ACA++ +L G+ +H I R F NV + A+IDMY KCG+I ++ VF E RR
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
L W S++IG +G+ EAVE F K+ SS ++PDR+ F+ VL+AC+H G +++ YF+
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG-N 434
+M + Y I P Y C+V++LG+ ++ M PD STWG++L +C+ H N
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 435 VEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
I++ AA+KV +L P G YV++S + AA K+ + R +M+ +KE G S I
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Query: 495 LYGEVHEFLAGGRLHPKTQEIYSLL 519
+ +V F ++ P +YS+L
Sbjct: 560 VENQVFSFAVSDKMCPNASSVYSVL 584
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
I ++I+ + G ++E+R LF+ M R V W +MI+GY + A E F M ++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCG-SIEN 303
G P+EFT+ S+L +C ++ L +G VH + + E ++ V A+++MY C ++E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK--LQSSNLKP 349
A +F + W ++I G G ++ + + L+++ + P
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 246/491 (50%), Gaps = 39/491 (7%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H +K G A D + L +IN A +F M PN+ SW ++I G++
Sbjct: 51 LHTLTLKLGFASDTFTVNH-LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 98 TPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
PQ A+S+F M V P + T+ SVFKA + L G +H R+ GL ++ +S
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA--RT 214
++++ MY KC ++ +RR+F++M R
Sbjct: 170 SSLVDMYG-------------------------------KCNDVETARRVFDSMIGYGRN 198
Query: 215 AVTWNSMISGYVRNGRLKEALEVFS--NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
V+W SMI+ Y +N R EA+E+F N ++F + S+++AC+ LG LQ G+
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H + R +E N +V T+++DMY KCGS+ A ++F R + + S+I+ A +G
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLG 318
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
AV+ F ++ + + P+ V+ +GVL AC H G ++E Y SLM Y + P +HYTC
Sbjct: 319 EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTC 378
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPD--ASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP 450
+V++LG+ K + + + A WG+LLS+ R HG VEI A++++ Q +
Sbjct: 379 VVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQ 438
Query: 451 GDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHP 510
Y+ +SN A S +E++ R+ MK + KE CS IE V+ F AG
Sbjct: 439 QVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCD 498
Query: 511 KTQEIYSLLND 521
++ EI L D
Sbjct: 499 ESGEIERFLKD 509
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 239/469 (50%), Gaps = 32/469 (6%)
Query: 54 ASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE 113
+S +L +GD+ A VF MP L +WN +I G + + +SLF +M
Sbjct: 27 SSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 114 VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAK 173
P + T SVF A L + G Q+HG +K GLE D +++++ HMY +G
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG------ 140
Query: 174 RVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKE 233
K+ + + +M R V WN++I G +NG +
Sbjct: 141 -------------------------KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
L ++ M+ G P++ T V++L++C+ L G+ +H+ + V V++++I
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 294 MYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRV 352
MY KCG + +A + F W+S+I +G EA+E F+ + + +N++ + V
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 353 SFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKG 412
+F+ +L AC H G D+ F +MV Y +P +KHYTC+V++LG+ I+
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 413 MTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEA 472
M I D W +LLS+C H N E+A+R +++ Q+DP D+ YVL++NV A++ ++ +
Sbjct: 356 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDV 415
Query: 473 MEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
E R M++ +KE G S E GEVH+F G R K++EIYS L +
Sbjct: 416 SEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 464
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 110/204 (53%)
Query: 162 MYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSM 221
MY+ G A V+ + + ++ N +I G + G + +R++F+ M R TWN+M
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 222 ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
I+G ++ +E L +F M G P E+T+ S+ + A L S+ G+ +H Y +
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 282 ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
EL+++V +++ MY + G +++ V P R L WN++I+G A NG + +
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 342 LQSSNLKPDRVSFIGVLTACKHLG 365
++ S +P++++F+ VL++C L
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLA 206
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 243/475 (51%), Gaps = 40/475 (8%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+HAH++ +G+A A++++TF G + A VF MP ++ +I +R+
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVEC-GKVLDARKVFDEMPKRDISGCVVMIGACARNG 96
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN 157
Q ++ F +M ++ PS+ KA L G +H V+K E D FI +
Sbjct: 97 YYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 158 TIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA------ 211
++I MY+ G + A++VF + E D++ N+MI G A + DE+ L +M
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 212 ---------------------------------ARTAVTWNSMISGYVRNGRLKEALEVF 238
V+W S+ISG V N + ++A + F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
M G+ P+ T+++LL AC L ++HG+ +H Y E + V +A++DMY KC
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G I A+ +F + P++ +NS+I A +G +AVE F +++++ K D ++F +L
Sbjct: 337 GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Query: 359 TACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD 418
TAC H G D + F LM N Y I P ++HY CMV++LG+ IK M + PD
Sbjct: 397 TACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPD 456
Query: 419 ASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAM 473
WG+LL++CR HGN+E+A+ AA+ + +L+P ++G +L++++ A + +E +
Sbjct: 457 LFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVV 511
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 241 MQEEGVEPSEFTMVS------LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
M++ + PS F ++S L+ A G +H+++ + + ++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 295 YCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
Y +CG + +A +VF+ P+R +S +I A NG+ +E+++FF ++ LK D
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 355 IGVLTACKHLGAIDEAKYY------FSLMVNAYEIEPSIKHYTCMVEV---------LG- 398
+L A ++L + K FS +A+ + I Y+ EV LG
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 399 -----------------QXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRA 441
Q +K + I PD TW +L+S N E
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 442 AQKVC 446
+ +C
Sbjct: 241 LELMC 245
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 249/485 (51%), Gaps = 31/485 (6%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
QIH IK+ LA + IA + A G +N A VF ++ P+ SWN II G + +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARC-GFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
A+S+F M S P ++ S+ A + A G Q+H ++K G D +
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N+++ MY L +F++ F N A +V
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFED----------------------------FRNNA--DSV 439
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+WN++++ +++ + E L +F M EP TM +LL C + SL+ G VH Y
Sbjct: 440 SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 499
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+ + +IDMY KCGS+ A +F+ R + W+++I+G A +G EA+
Sbjct: 500 LKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEAL 559
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
F +++S+ ++P+ V+F+GVLTAC H+G ++E ++ M + I P+ +H +C+V++
Sbjct: 560 ILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDL 619
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGY 456
L + I M + PD W +LLS+C+ GNV +A++AA+ + ++DP ++ +
Sbjct: 620 LARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAH 679
Query: 457 VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
VL+ ++ A+S +E A R MK++ +K PG S IE+ ++H F A HP+ +IY
Sbjct: 680 VLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Query: 517 SLLND 521
++L++
Sbjct: 740 TVLHN 744
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C++ + Q IH HI+ + +D I + +L+ G + A VF MP NL S
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM-YGKCGSLRDAREVFDFMPERNLVS 135
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
+ ++I G+S++ AI L++ ML ++ P + + S+ KA A G QLH +V+
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
KL N +I MY +S+A R
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDAS-------------------------------R 224
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV-EPSEFTMVSLLNACAHLG 264
+F + + ++W+S+I+G+ + G EAL M GV P+E+ S L AC+ L
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
+G +H ++ N I ++ DMY +CG + +A VF++ R + WN II
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
GLA NG+ EAV FS+++SS PD +S +L A A+ + S ++ +
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFL 403
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+ ++ + + N D+ +W ++L++C +H
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 154/359 (42%), Gaps = 39/359 (10%)
Query: 15 FISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYA 71
+ DQ + C + D +Q+HA +IK + H+ A L ++ A
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMYVRFNQMSDA 222
Query: 72 YMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV-QPQKLTYPSVFKAYAQ 130
VF +P +L SW++II GFS+ A+S +ML V P + + S KA +
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
L G+Q+HG +K L + ++ MYA G L+ A+RVFD+ D + N +
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
I GLA NG EA+ VFS M+ G P
Sbjct: 343 IAGLAN-------------------------------NGYADEAVSVFSQMRSSGFIPDA 371
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE- 309
++ SLL A +L G +HSYI + F ++ V +++ MY C + +FE
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 310 -RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
RN +S WN+I+ + E + F + S +PD ++ +L C + ++
Sbjct: 432 FRNNADSVS-WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 75/364 (20%)
Query: 15 FISDQPCLTML---QNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLT---FCASSSGDI 68
FI D L L Q + QIH++IIK G D + +LT FC+ D+
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS----DL 422
Query: 69 NYAYMVFTRMPS-PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA 127
+ +F + + SWNTI+ + P + LF ML SE +P +T ++ +
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 128 YAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC 187
++ + G+Q+H +K GL +QFI N +I MYA G L +A+R+FD DV++
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
+++I+G Y ++G +EAL +F M+ G+E
Sbjct: 543 STLIVG-------------------------------YAQSGFGEEALILFKEMKSAGIE 571
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P+ T V +L AC+H+G ++ G +++ ++ + + +C C
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG-------ISPTKEHCSC--------- 615
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
++ LA G EA F +++ L+PD V + +L+ACK G +
Sbjct: 616 --------------VVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSACKTQGNV 658
Query: 368 DEAK 371
A+
Sbjct: 659 HLAQ 662
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 5/212 (2%)
Query: 158 TIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
++I ++S L++ +++ D + D I N ++ KCG + ++R +F+ M R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V++ S+I+GY +NG+ EA+ ++ M +E + P +F S++ ACA + G+ +H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ + + ++I A+I MY + + +A VF P + L W+SII G + G E
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 334 EAVEFFSKLQSSNL-KPDRVSFIGVLTACKHL 364
EA+ ++ S + P+ F L AC L
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF-TMVSLLNACAHLGSLQHGEW 271
+T N I+ ++ +EALE F Q+ T +SL+ AC+ SL G
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
+H +I +N + + I+ I+ MY KCGS+ +A EVF+ P R L + S+I G + NG
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
EA+ + K+ +L PD+ +F ++ AC
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 254/495 (51%), Gaps = 34/495 (6%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNT 88
C +++ + +H ++K+ +++ H L C G A +F MP +L SWN+
Sbjct: 44 CVSIELCRLLHCKVVKS-VSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNS 102
Query: 89 IIRGFSRSSTPQFAISLFVDMLCSEV--QPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
+I G+S + M+ SEV +P ++T+ S+ A G+ +G +HG V+K
Sbjct: 103 LISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK 162
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
G+ ++ + N I+ Y K G + S +L
Sbjct: 163 FGVLEEVKVVNAFINWYG-------------------------------KTGDLTSSCKL 191
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
F +++ + V+WN+MI +++NG ++ L F+ + G EP + T +++L +C +G +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
+ + +H I F N + TA++D+Y K G +E++ VF W +++
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
A +G R+A++ F + + PD V+F +L AC H G ++E K+YF M Y I+P
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVC 446
+ HY+CMV++LG+ IK M + P + WG+LL +CR + + ++ +AA+++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF 431
Query: 447 QLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
+L+P D YV++SN+ +AS +++A R LMK+ + GCS IE ++H+F+ G
Sbjct: 432 ELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGD 491
Query: 507 RLHPKTQEIYSLLND 521
HP++++I L +
Sbjct: 492 WSHPESEKIQKKLKE 506
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 250/464 (53%), Gaps = 15/464 (3%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H+ IK G+ D + S +++ G + A VF MP N+ +WN +I G+ +
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISM-YGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG 126
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE-KDQFIS 156
A LF ++ V +T+ + K Y + +L R + E K+
Sbjct: 127 DAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFER---MPFELKNVKAW 180
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
+ ++ +Y N+ + +A++ F++ E + + M+ G + G + E+R +F + AR V
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
WN++I+GY +NG +A++ F NMQ EG EP T+ S+L+ACA G L G VHS I
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
ELN V A+IDMY KCG +ENA VFE R ++C NS+I LA++G +EA+
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEAL 360
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
E FS ++S +LKPD ++FI VLTAC H G + E FS M +++P++KH+ C++ +
Sbjct: 361 EMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHL 419
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGY 456
LG+ +K M + P+ + G+LL +C+ H + E+A++ K+ + Y
Sbjct: 420 LGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQ-VMKIIETAGSITNSY 478
Query: 457 -----VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
+SN+ A + +++ A R+ M++ EK PG SS+ L
Sbjct: 479 SENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G LH +K G+ D + +++I MY G + A++VFDE E +V N+MI G
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 197 CGKIDESRRLFNNMAA-RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
G + LF ++ R VTW MI GY + +++A E+F M P E V
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNVK 178
Query: 256 LLNACAHLGSLQHGEWVHSYI---RRNNF----ELNVIVLTAIIDMYCKCGSIENAIEVF 308
S+ G +V++ R F E N V + ++ Y + G + A +F
Sbjct: 179 AW-------SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 309 ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
R R L WN++I G A NG+ +A++ F +Q +PD V+ +L+AC G +D
Sbjct: 232 YRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 369 EAKYYFSLM 377
+ SL+
Sbjct: 292 VGREVHSLI 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 11/233 (4%)
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVE-PSEFTMVSLLNACA-HLGSLQHGEWVHSYI 276
+++I ++ G +AL ++ ++ GV P ++ L ACA + + G+ +HS
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI--LRACACVVPRVVLGKLLHSES 72
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+ +V+V +++I MY KCG + +A +VF+ P R ++ WN++I G NG A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
F ++ + V++I ++ I++A+ F M +E++ ++K ++ M+ V
Sbjct: 133 GLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERM--PFELK-NVKAWSVMLGV 186
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD 449
+ + +A W ++S + G+V A+ +V D
Sbjct: 187 YVNNRKMEDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARD 238
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 262/551 (47%), Gaps = 81/551 (14%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP-- 79
LT+L + T+ QQ+HA +I G D + LT S +++A F R+P
Sbjct: 11 LTIL-SQAKTLNHTQQVHAKVIIHGF-EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFV----DMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
N +SWNTI+ G+S+S T ++ L + C V L + KA LG
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLE 126
Query: 136 DGAQLHGRVVKLGLEKDQF--------------------------ISNTIIHMYANSGLL 169
+G +HG +K GL+KD + + N+++ G L
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 170 SEAK-----RVF----DEKVELDVI-------ACNSMIMG-------------------- 193
+K R+F D + LD + AC ++ G
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 194 ---------LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
KC +D +R+LF R V W ++ISG+ + R EA ++F M E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
+ P++ T+ ++L +C+ LGSL+HG+ VH Y+ RN E++ + T+ IDMY +CG+I+ A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
VF+ P R + W+S+I +NG EA++ F K++S N+ P+ V+F+ +L+AC H
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 365 GAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGS 424
G + E F M Y + P +HY CMV++LG+ I M + P AS WG+
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 425 LLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFT 484
LLS+CR H V++A A+K+ ++P + YVL+SN+ A + +E R M
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGY 546
Query: 485 EKEPGCSSIEL 495
K G S+ E+
Sbjct: 547 RKHVGQSATEV 557
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 262/487 (53%), Gaps = 33/487 (6%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+H +++K+GL+ + A+ ++ F + S + + F P + +W++II F+++
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD-SRRAFEDSPQKSSTTWSSIISCFAQN 94
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
P ++ M+ ++P PS K+ A L G +H +K G + D F+
Sbjct: 95 ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVG 154
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
++++ MYA G + A+++FDE + +V+ + M+ G A+ G+ +E+ LF
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF--------- 205
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
KEAL F N+ ++++ S+++ CA+ L+ G +H
Sbjct: 206 ---------------KEAL--FENLA-----VNDYSFSSVISVCANSTLLELGRQIHGLS 243
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
+++F+ + V ++++ +Y KCG E A +VF P + L WN+++ A + H ++ +
Sbjct: 244 IKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVI 303
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
E F +++ S +KP+ ++F+ VL AC H G +DE +YYF M + IEP+ KHY +V++
Sbjct: 304 ELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDM 362
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGY 456
LG+ I M I+P S WG+LL+SC H N E+A AA KV +L P +G +
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 457 VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
+ +SN AA +FE+A + R L+++ +KE G S +E +VH F AG R H K++EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482
Query: 517 SLLNDPG 523
L + G
Sbjct: 483 EKLAELG 489
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 250/498 (50%), Gaps = 49/498 (9%)
Query: 55 SRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML--CS 112
S V +C GD+ AY +F MP N+ SW +I GF+ + + A+ LF++M
Sbjct: 236 SMVYGYC--RYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVD 293
Query: 113 EVQPQKLTYPSVFKAYAQLGAGHD----GAQLHGRVVKLGLEK---DQFISNTIIHMYAN 165
V P T S+ AYA G G + G QLH +V+ G E D ++ +++HMYA+
Sbjct: 294 AVSPNGETLISL--AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 166 SGLLSEAKRVFDEKVEL------------------------------DVIACNSMIMGLA 195
SGL++ A+ + +E +L D ++ SMI G
Sbjct: 352 SGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL 411
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
+ G + + LF + + VTW MISG V+N EA + S+M G++P T
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNN--FELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
LL++ +L G+ +H I + ++ ++I+ +++ MY KCG+IE+A E+F + +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ WNS+I+GL+ +G +A+ F ++ S KP+ V+F+GVL+AC H G I
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC---- 429
F M Y I+P I HY M+++LG+ I + PD + +G+LL C
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 651
Query: 430 RKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
R IA+RAA ++ +LDP +A G+V + NV A + + E R M +K PG
Sbjct: 652 RDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPG 711
Query: 490 CSSIELYGEVHEFLAGGR 507
CS + + G + FL+G +
Sbjct: 712 CSWVVVNGRANVFLSGDK 729
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 170/384 (44%), Gaps = 33/384 (8%)
Query: 68 INYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQK--LTYPSVF 125
+N A+ +F MP N+ SW ++ + A+ LF +M P++ +++ ++
Sbjct: 124 MNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEM------PERNVVSWNTLV 176
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
+ G Q+ + +D N +I Y + + EAK +F + E +V+
Sbjct: 177 TGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE-- 243
SM+ G + G + E+ RLF M R V+W +MISG+ N +EAL +F M++
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 244 EGVEPSEFTMVSLLNACAHLGS--LQHGEWVHSYIRRNNFEL---NVIVLTAIIDMYCKC 298
+ V P+ T++SL AC LG + GE +H+ + N +E + + +++ MY
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G I +A + N L N II NG A F +++S + D+VS+ ++
Sbjct: 353 GLIASAQSLL--NESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMI 407
Query: 359 TACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---I 415
G + A F L ++ + +T M+ L Q + M +
Sbjct: 408 DGYLEAGDVSRA---FGLFQKLHDKDGVT--WTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 416 NPDASTWGSLLSSCRKHGNVEIAK 439
P ST+ LLSS N++ K
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGK 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
+++ YA +G L EA+ +F+ E +++ CN+M+ G KC +++E+ LF M + V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-PKNVV 139
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS-------------LLNACAHL 263
+W M++ +GR ++A+E+F M E V S T+V+ + +A
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMPERNV-VSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
Query: 264 GSLQHGEWVHSYIRRNNF-----------ELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+ + YI + E NV+ T+++ YC+ G + A +F P
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS--SNLKPDRVSFIGVLTACKHLG 365
R + W ++I G A N REA+ F +++ + P+ + I + AC LG
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 49/211 (23%)
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
V+ S++ AK G +DE+R LF M R VT N+M++GYV+ R+ EA +F M +
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK 136
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
NV+ T ++ C G E+
Sbjct: 137 ----------------------------------------NVVSWTVMLTALCDDGRSED 156
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
A+E+F+ P R + WN+++ GL NG +A + F + S D VS+ ++
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
++EAK F M E ++ +T MV
Sbjct: 213 NDGMEEAKLLFGDMS-----EKNVVTWTSMV 238
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 216/421 (51%), Gaps = 33/421 (7%)
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC-SEVQPQKLTYPSVFKAYAQLG 132
VF MP N++SWN II FSRS +I LF+ M S V+P T P + +A +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G +H +KLG F+S+ ++ MY +
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD--------------------------- 181
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
GK+ +R+LF++M R +V + +M GYV+ G L +F M G
Sbjct: 182 ----MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
MVSLL AC LG+L+HG+ VH + R L + + AI DMY KC ++ A VF
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
RR + W+S+I+G ++G + + F ++ ++P+ V+F+GVL+AC H G ++++
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWL 357
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
YF LM Y I P +KHY + + + + ++ M + PD + G++LS C+ +
Sbjct: 358 YFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVY 416
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
GNVE+ +R A+++ QL P A YV ++ + +A+ +F+EA R MKE K PGCSS
Sbjct: 417 GNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSS 476
Query: 493 I 493
I
Sbjct: 477 I 477
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 183 DVIACNSMIMGLAKCGKI-DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+V+ + +++ +K + S +F +M R +WN +I + R+G +++++F M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 242 QEEG-VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
E V P +FT+ +L AC+ + G+ +H + F ++ V +A++ MY G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ +A ++F+ P R + ++ G G + F ++ S D V + +L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 361 CKHLGAIDEAK 371
C LGA+ K
Sbjct: 245 CGQLGALKHGK 255
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 241/459 (52%), Gaps = 40/459 (8%)
Query: 39 HAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSST 98
H +I G +H +S + + ++ A VF MP P++ W ++ FS++
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 99 PQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN 157
+ A+ LF M + + P T+ +V A L G ++HG+++ G+ + + +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 158 TIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVT 217
+++ MY KCG + E+R++FN M+ + +V+
Sbjct: 305 SLLDMYG-------------------------------KCGSVREARQVFNGMSKKNSVS 333
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS-YI 276
W++++ GY +NG ++A+E+F M+E+ + + ++L ACA L +++ G+ +H Y+
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
RR F NVIV +A+ID+Y K G I++A V+ + R + WN+++ LA NG EAV
Sbjct: 390 RRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAV 448
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
FF+ + +KPD +SFI +LTAC H G +DE + YF LM +Y I+P +HY+CM+++
Sbjct: 449 SFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDL 508
Query: 397 LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV-EIAKRAAQKVCQLDPGDAGG 455
LG+ ++ DAS WG LL C + + +A+R A+++ +L+P
Sbjct: 509 LGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMS 568
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
YVL+SN+ A + +A+ R LM K G S I+
Sbjct: 569 YVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 152/339 (44%), Gaps = 35/339 (10%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
AI + SE+ Y S+ + ++ + G Q H VVK GLE D+ + N+++
Sbjct: 45 AIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 162 MYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSM 221
+Y G + E+RR+F+ + A++W SM
Sbjct: 105 LYFKLG------------------------------PGMRETRRVFDGRFVKDAISWTSM 134
Query: 222 ISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
+SGYV +ALEVF M G++ +EFT+ S + AC+ LG ++ G H + + F
Sbjct: 135 MSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF 194
Query: 282 ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
E N + + + +Y +A VF+ P + CW +++ + N EA+ F
Sbjct: 195 EWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYA 254
Query: 342 L-QSSNLKPDRVSFIGVLTACKHLGAIDEAK-YYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
+ + L PD +F VLTAC +L + + K + L+ N I ++ + ++++ G+
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG--IGSNVVVESSLLDMYGK 312
Query: 400 XXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
GM+ ++ +W +LL ++G E A
Sbjct: 313 CGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKA 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 38/265 (14%)
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+A T S I + G+L EA+ + ++ + + SLL C + S HG H
Sbjct: 25 SAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFH 84
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCG-SIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
+++ ++ E + V +++ +Y K G + VF+ + W S++ G
Sbjct: 85 AHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEH 144
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM--------------- 377
+A+E F ++ S L + + + AC LG + + + ++
Sbjct: 145 VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTL 204
Query: 378 ----------VNAYEI-----EPSIKHYTCMVEVLGQXXXXXXXXXXI----KGMTINPD 418
V+A + EP + +T ++ + +G + PD
Sbjct: 205 AYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 264
Query: 419 ASTWGSLLSSCRKHGNVEIAKRAAQ 443
ST+G++L++C GN+ K+ +
Sbjct: 265 GSTFGTVLTAC---GNLRRLKQGKE 286
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 245/487 (50%), Gaps = 34/487 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +HA + K + S +LT + D + AY+VF M ++ +W ++I G +
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD-AYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 96 SSTPQFAISLFVDMLCSE--VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
+ + A+ +F DM + ++P SV A A L A G Q+HG ++K GL +
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+ +++I +Y+ KCG + + ++F +M+
Sbjct: 512 FVGSSLIDLYS-------------------------------KCGLPEMALKVFTSMSTE 540
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V WNSMIS Y RN + ++++F+ M +G+ P ++ S+L A + SL G+ +H
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
Y R + + A+IDMY KCG + A +F++ + L WN +I G +G
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCI 660
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
A+ F +++ + PD V+F+ +++AC H G ++E K F M Y IEP+++HY M
Sbjct: 661 TALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANM 720
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
V++LG+ IK M I D+S W LLS+ R H NVE+ +A+K+ +++P
Sbjct: 721 VDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG 780
Query: 454 GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQ 513
YV + N+ + EA + LMKE K+PGCS IE+ + F +GG P
Sbjct: 781 STYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKA 840
Query: 514 EIYSLLN 520
EI+++LN
Sbjct: 841 EIFNVLN 847
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 155/335 (46%), Gaps = 35/335 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS-PNLYSWNTIIRGFS 94
+QIH +++ L D + ++ I+ A+ VF + N+ WN +I GF
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID-AWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
S + ++ L++ + V+ ++ A +Q G Q+H VVK+GL D +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ +++ MY+ KCG + E+ +F+ + +
Sbjct: 309 VCTSLLSMYS-------------------------------KCGMVGEAETVFSCVVDKR 337
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
WN+M++ Y N AL++F M+++ V P FT+ ++++ C+ LG +G+ VH+
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHA 397
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ + + + +A++ +Y KCG +A VF+ + + W S+I GL NG +E
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 335 AVEFFSKLQSSN--LKPDRVSFIGVLTACKHLGAI 367
A++ F ++ + LKPD V AC L A+
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 27/248 (10%)
Query: 119 LTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE 178
T+PS+ KA + L G +HG VV LG D FI+ ++++MY G L A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD- 119
Query: 179 KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVF 238
G ++ + ++AR WNSMI GY + R KE + F
Sbjct: 120 --------------GWSQSQ---------SGVSARDVTVWNSMIDGYFKFRRFKEGVGCF 156
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSL--QHGEWVHSYIRRNNFELNVIVLTAIIDMYC 296
M GV P F++ +++ G+ + G+ +H ++ RN+ + + + TA+IDMY
Sbjct: 157 RRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYF 216
Query: 297 KCGSIENAIEVF-ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFI 355
K G +A VF E + + WN +I+G +G +++ + +++++K SF
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276
Query: 356 GVLTACKH 363
G L AC
Sbjct: 277 GALGACSQ 284
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 179/431 (41%), Gaps = 42/431 (9%)
Query: 20 PCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVF---- 75
P L + T + + IH ++ G +D A+ ++ G ++YA VF
Sbjct: 64 PSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKC-GFLDYAVQVFDGWS 122
Query: 76 ---TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
+ + + ++ WN++I G+ + + + F ML V+P + V + G
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 133 --AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+G Q+HG +++ L+ D F+ +I MY GL +A RVF VE++
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF---VEIE------- 232
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
D+S V WN MI G+ +G + +L+++ + V+
Sbjct: 233 ----------DKS----------NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
+ L AC+ + G +H + + + V T+++ MY KCG + A VF
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ L WN+++ A N + A++ F ++ ++ PD + V++ C LG +
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
K + + I+ + + ++ + + K M D WGSL+S
Sbjct: 393 KSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLC 450
Query: 431 KHGNVEIAKRA 441
K+G + A +
Sbjct: 451 KNGKFKEALKV 461
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEP---SEFTMVSLLNACAHLGSLQHGEWVHSY 275
NS I ++ G +AL ++S + +G P S FT SLL AC+ L +L +G+ +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR-------RGLSCWNSIIIGLAM 328
+ + + + T++++MY KCG ++ A++VF+ + R ++ WNS+I G
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSF-IGVLTACK 362
+E V F ++ ++PD S I V CK
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 242/472 (51%), Gaps = 6/472 (1%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+HA +I +G D A R+L +S GD +Y ++ + LY N + + + S
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLK-SSSRFGDSSYTVSIYRSIG--KLYCANPVFKAYLVS 96
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
S+P+ A+ + D+L P T+ S+ + G HG+ +K G ++ +
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N+++HMY G L AK++F E + D+++ NS+I G+ + G + + +LF+ M + +
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
+WN MIS Y+ ++ +F M G + +E T+V LLNAC L+ G VH+ +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
R +V++ TA+IDMY KC + A +F+ R WN +I+ ++G +
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
E F + + L+PD V+F+GVL C G + + + Y+SLMV+ ++I+P+ H CM +
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 397 LGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
+K + + P+++ W +LLSS R GN + + A+ + + DP +
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 454 GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAG 505
Y L+ N+ + + ++E+ R ++KE + PGC ++L VH G
Sbjct: 457 KYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 265/503 (52%), Gaps = 16/503 (3%)
Query: 29 CTTMKDF---QQIHAHIIK-TGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
C + D ++IH++I++ + L D + +++F A GD + AY F+ M + ++
Sbjct: 340 CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF-GDTSAAYWAFSLMSTKDII 398
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
SWN I+ F+ S QF + L +E + +T S+ K + ++HG
Sbjct: 399 SWNAILDAFA-DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 144 VVKLGL---EKDQFISNTIIHMYANSGLLSEAKRVF---DEKVELDVIACNSMIMGLAKC 197
VK GL E++ + N ++ YA G + A ++F E+ L ++ NS++ G
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL--VSYNSLLSGYVNS 515
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
G D+++ LF M+ TW+ M+ Y + EA+ VF +Q G+ P+ T+++LL
Sbjct: 516 GSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLL 575
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
CA L SL H YI R ++ + ++D+Y KCGS+++A VF+ + RR L
Sbjct: 576 PVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
+ +++ G A++G +EA+ +S + SN+KPD V +LTAC H G I + + +
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 378 VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
+ ++P+++ Y C V+++ + + M + P+A+ WG+LL +C + +++
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDL 754
Query: 438 AKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYG 497
A + Q + D G +VL+SN+ AA K+E ME R LMK+ +K GCS +E+ G
Sbjct: 755 GHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDG 814
Query: 498 EVHEFLAGGRLHPKTQEIYSLLN 520
+ + F++G HP+ I+ L+N
Sbjct: 815 QRNVFVSGDCSHPRRDSIFDLVN 837
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 56/389 (14%)
Query: 15 FISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRV---LTFCASSSGDI 68
F +D + C ++ D + +H + K G HIA S V + + +
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLG----HIACSEVSKSVLNMYAKCRRM 72
Query: 69 NYAYMVFTRMPSPNLYSWNTIIRGFS----RSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
+ +F +M S + WN ++ G S R + F F D E +P +T+ V
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFAD----EPKPSSVTFAIV 128
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSG-LLSEAKRVFDEKVELD 183
+LG ++G +H ++K GLEKD + N ++ MYA G + +A FD + D
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
V+ +WN++I+G+ N + +A F M +
Sbjct: 189 VV-------------------------------SWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 244 EGVEPSEFTMVSLLNACAHLG---SLQHGEWVHSY-IRRNNFELNVIVLTAIIDMYCKCG 299
E EP+ T+ ++L CA + + + G +HSY ++R+ + +V V +++ Y + G
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 300 SIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVL 358
IE A +F R + L WN +I G A N +A + F L ++ PD V+ I +L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 359 TACKHLGAIDEAKYYFS-LMVNAYEIEPS 386
C L + K S ++ ++Y +E +
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 159/359 (44%), Gaps = 40/359 (11%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H++IIK GL D + + +++ A AY F + ++ SWN II GFS
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG---AGHDGAQLHGRVVKLGLEKD 152
++ A F ML +P T +V A + A G Q+H VV+
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW--- 258
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
++ V CNS++ + G+I+E+ LF M +
Sbjct: 259 ---------------------------LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVSLLNACAHLGSLQHGEW 271
+ V+WN +I+GY N +A ++F N+ +G V P T++S+L CA L L G+
Sbjct: 292 KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 272 VHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
+HSYI R+++ L + V A+I Y + G A F + + WN+I+ A +
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
+ + + L + + D V+ + +L C ++ I + K V+ Y ++ + H
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE-----VHGYSVKAGLLH 465
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 253/497 (50%), Gaps = 40/497 (8%)
Query: 27 NHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSW 86
+H + K ++IH H +++ + + + S G+++YA +F M N+ +W
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSE---VQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
N +I ++R+ A F M SE +QP +T ++ A A L +G +HG
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKM--SEQNGLQPDVITSINLLPASAIL----EGRTIHGY 355
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES 203
++ G + +I MY +CG++ +
Sbjct: 356 AMRRGFLPHMVLETALIDMYG-------------------------------ECGQLKSA 384
Query: 204 RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
+F+ MA + ++WNS+I+ YV+NG+ ALE+F + + + P T+ S+L A A
Sbjct: 385 EVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAES 444
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
SL G +H+YI ++ + N I+L +++ MY CG +E+A + F + + WNSII
Sbjct: 445 LSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSII 504
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI 383
+ A++G R +V FS++ +S + P++ +F +L AC G +DE YF M Y I
Sbjct: 505 MAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI 564
Query: 384 EPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQ 443
+P I+HY CM++++G+ ++ M P A WGSLL++ R H ++ IA+ AA+
Sbjct: 565 DPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAE 624
Query: 444 KVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFL 503
++ +++ + G YVL+ N+ A + ++E+ ++LM+ + S++E G+ H F
Sbjct: 625 QIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFT 684
Query: 504 AGGRLHPKTQEIYSLLN 520
G R H T +IY +L+
Sbjct: 685 NGDRSHVATNKIYEVLD 701
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 33/292 (11%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A +F M + + WN +I+GF+ A+ + M+ + V+ TYP V K+ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+ + +G ++H V+KLG D ++ N++I +Y G +A++VF+E E D+++ NS
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS- 201
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
MISGY+ G +L +F M + G +P
Sbjct: 202 ------------------------------MISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFE 309
F+ +S L AC+H+ S + G+ +H + R+ E +V+V+T+I+DMY K G + A +F
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN-LKPDRVSFIGVLTA 360
+R + WN +I A NG +A F K+ N L+PD ++ I +L A
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 165 NSGLLSEAKRVFDEKV----ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNS 220
+SG+ A+ V ++ +++ A + G A ++++ +LF+ M A WN
Sbjct: 41 DSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNV 100
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
MI G+ G EA++ +S M GV+ FT ++ + A + SL+ G+ +H+ + +
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFS 340
F +V V ++I +Y K G +A +VFE P R + WNS+I G G ++ F
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 341 KLQSSNLKPDRVSFIGVLTACKHL 364
++ KPDR S + L AC H+
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHV 244
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 243/461 (52%), Gaps = 33/461 (7%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S G ++ ++ VF M ++ SWNT+I F ++ + L +M + +T
Sbjct: 364 SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVT 423
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
++ A + L G Q H +++ G++ + +++ +I MY+ SGL+ ++++F+
Sbjct: 424 ALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEG---- 478
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
+ A R TWNSMISGY +NG ++ VF M
Sbjct: 479 -------------------------SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
E+ + P+ T+ S+L AC+ +GS+ G+ +H + R + NV V +A++DMY K G+I+
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
A ++F + R + ++I+G +G A+ F +Q S +KPD ++F+ VL+AC
Sbjct: 574 YAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD-AST 421
+ G IDE F M Y I+PS +HY C+ ++LG+ +KG+ + A
Sbjct: 634 YSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAEL 693
Query: 422 WGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD--AGGYVLMSNVQAASNKFEEAMEQRILM 479
WGSLL SC+ HG +E+A+ ++++ + D G +G VL+SN+ A K++ + R M
Sbjct: 694 WGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGM 753
Query: 480 KENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
+E +KE G S IE+ G V+ F++ + HP + EIY +++
Sbjct: 754 REKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVID 794
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 218/518 (42%), Gaps = 114/518 (22%)
Query: 32 MKDFQQIHAHIIK-----TGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSW 86
+K + +H H+I+ + + H+ + V A + + VF M N+ +W
Sbjct: 123 LKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAW 182
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
NT+I + ++ A F M+ EV+P +++ +VF A + + +G ++K
Sbjct: 183 NTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLK 242
Query: 147 LGLE--KDQFIS-------------------------------NTIIHMYANSGLLSEAK 173
LG E KD F+ NT+I +Y + L E+
Sbjct: 243 LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESI 302
Query: 174 RVFDEKV----------------------------------------ELDVIACNSMIMG 193
+F E + EL ++ NS+++
Sbjct: 303 ELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM 362
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
++CG + +S +F +M R V+WN+MIS +V+NG E L + MQ++G + T+
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITV 422
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN-- 311
+LL+A ++L + + G+ H+++ R + + + +IDMY K G I + ++FE +
Sbjct: 423 TALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGY 481
Query: 312 PRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
R + WNS+I G NGH + F K+ N++P+ V+ +L AC +G++D K
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 372 ---------------YYFSLMVNAYEIEPSIKH---------------YTCMVEVLGQXX 401
+ S +V+ Y +IK+ YT M+ GQ
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 402 XXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVE 436
M I PDA T+ ++LS+C G ++
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 152/347 (43%), Gaps = 36/347 (10%)
Query: 55 SRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV 114
SR+ C G+ A +F +P P WNTII GF ++ P A+ + M +
Sbjct: 44 SRLSKIC--QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKT 99
Query: 115 QP----QKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLS 170
P TY S KA A+ G +H +++ + + N++++MY
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY------- 152
Query: 171 EAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGR 230
++C + C + D R++F+NM + V WN++IS YV+ GR
Sbjct: 153 --------------VSC----LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGR 194
Query: 231 LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR--NNFELNVIVL 288
EA F M V+PS + V++ A + S++ + + + + + ++ V+
Sbjct: 195 NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVV 254
Query: 289 TAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE-FFSKLQSSNL 347
++ I MY + G IE++ VF+ R + WN++I N E++E F + S +
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Query: 348 KPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
D V+++ +A L ++ + + + + P + + MV
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 39/311 (12%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVF--TRMPSPNLYSWNTIIRGF 93
+Q HA +I+ G+ + + + + + S SG I + +F + + +WN++I G+
Sbjct: 439 KQTHAFLIRQGIQFEGMNSYLIDMY--SKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
+++ + +F ML ++P +T S+ A +Q+G+ G QLHG ++ L+++
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+++ ++ MY+ +G + A+ +F + E + + +MI+
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL--------------------- 595
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
GY ++G + A+ +F +MQE G++P T V++L+AC++ G + G +
Sbjct: 596 ----------GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 274 SYIRR-NNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG--LSCWNSIIIGLAMNG 330
+R N + + I DM + G + A E + G W S++ ++G
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 331 HEREAVEFFSK 341
E E E S+
Sbjct: 706 -ELELAETVSE 715
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 239/460 (51%), Gaps = 37/460 (8%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPSP-NLYSWNTIIRGF 93
+ H +I+ + D + +L+ +C ++ A +F R+ N +WNT+++G+
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL--LSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
+ I LF + ++ + SV + + +GA G LH VVK L+
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
+ N++I +Y G L+ A R+F E A
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCE--------------------------------ADT 496
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+TWN+MI+ YV + ++A+ +F M E +PS T+V+LL AC + GSL+ G+ +H
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
YI E+N+ + A+IDMY KCG +E + E+F+ ++ CWN +I G M+G
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
A+ F +++ S++KP +F+ +L+AC H G +++ K F L ++ Y+++P++KHY+C+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCL 675
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
V++L + + M +PD WG+LLSSC HG E+ R A++ DP +
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 454 GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
G Y++++N+ +A+ K+EEA R +M+E+ K G S +
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 21 CLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
C +L H T +H ++K G + A + S G + A +VF MP
Sbjct: 135 CAELLWFHVGTF-----VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPD 189
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDM--LCSEV-QPQKLTYPSVFKAYAQLGAGHDG 137
++ +W II G ++ + + M S+V +P T F+A + LGA +G
Sbjct: 190 RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
LHG VK GL +F+ +++ Y+ SG SEA F E + D+
Sbjct: 250 RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF------------ 297
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
+W S+I+ R+G ++E+ ++F MQ +G+ P + L+
Sbjct: 298 -------------------SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG-L 316
N + + G+ H ++ R+ F L+ V +++ MYCK + A ++F R G
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
WN+++ G + +E F K+Q+ ++ D S V+++C H+GA+
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 41/348 (11%)
Query: 18 DQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
D+ +L + +++ ++ +A II GL+ + AS++++ AS G N + VF
Sbjct: 26 DRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASY-GKPNLSSRVFHL 84
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
+ +++ WN+II+ + ++ F ML S P T P V A A+L H G
Sbjct: 85 VTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVG 144
Query: 138 AQLHGRVVKL-GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
+HG V+K G +++ + + ++ Y+ G L +A VFDE + DV+A
Sbjct: 145 TFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVA---------- 194
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE---PSEFTM 253
W ++ISG+V+NG + L M G + P+ T+
Sbjct: 195 ---------------------WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
AC++LG+L+ G +H + +N + V +++ Y K G+ A F
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD 293
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
+ W SII LA +G E+ + F ++Q+ + PD GV+ +C
Sbjct: 294 EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD-----GVVISC 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
++ + +I A GK + S R+F+ + R WNS+I + NG +L F +M
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI-RRNNFELNVIVLTAIIDMYCKCGSI 301
G P FT +++ACA L G +VH + + F+ N V + + Y KCG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNL---KPDRVSFIGVL 358
++A VF+ P R + W +II G NG + + K+ S+ KP+ +
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 359 TACKHLGAIDEAK 371
AC +LGA+ E +
Sbjct: 238 QACSNLGALKEGR 250
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 257/512 (50%), Gaps = 43/512 (8%)
Query: 18 DQPCLTMLQNHCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D+ L L + CT + + + +H +I+ G ++D + +L C + S A +
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN-CYAKSRAFKEAVNL 220
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F + ++ SW+T+I + ++ A+ +F DM+ +P T V +A A A
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA---AA 277
Query: 135 HD---GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
HD G + H ++ GLE + +S ++ MY
Sbjct: 278 HDLEQGRKTHELAIRKGLETEVKVSTALVDMY---------------------------- 309
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSE 250
KC +E+ +F+ + + V+W ++ISG+ NG ++E FS M E P
Sbjct: 310 ---MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
MV +L +C+ LG L+ + HSY+ + F+ N + +++++Y +CGS+ NA +VF
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGAIDE 369
+ W S+I G ++G +A+E F+ + +SS +KP+ V+F+ +L+AC H G I E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
F LMVN Y + P+++HY +V++LG+ K M +P G+LL +C
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 546
Query: 430 RKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
R H N E+A+ A+K+ +L+ AG Y+LMSNV ++E + R +K+ +K
Sbjct: 547 RIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLA 606
Query: 490 CSSIELYGEVHEFLAGGRLHPKTQEIYSLLND 521
S IE+ +VH F+A LHP+ + +Y LL +
Sbjct: 607 ESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 638
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 189/401 (47%), Gaps = 37/401 (9%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ IH + K + L + G + A +F + P++ +W++++ GF +
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 96 SSTPQFAISLFVDM-LCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ +P A+ F M + S+V P ++T ++ A +L G +HG V++ G D
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ N++++ YA S EA +F E DVI+
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS---------------------------- 231
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
W+++I+ YV+NG EAL VF++M ++G EP+ T++ +L ACA L+ G H
Sbjct: 232 ---WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
R E V V TA++DMY KC S E A VF R PR+ + W ++I G +NG
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 335 AVEFFS-KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN-AYEIEPSIKHYTC 392
++E FS L +N +PD + + VL +C LG +++AK + S ++ ++ P I
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--AS 406
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+VE+ + G+ + D W SL++ HG
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHG 446
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 247/490 (50%), Gaps = 34/490 (6%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+++ + +H ++ L ++ + S L + G ++ V + N+ +WN++I
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
++ A+ LF M+ ++P T S A G G Q+HG V++ +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-S 437
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
D+F+ N++I MY+ K G +D + +FN +
Sbjct: 438 DEFVQNSLIDMYS-------------------------------KSGSVDSASTVFNQIK 466
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
R+ VTWNSM+ G+ +NG EA+ +F M +E +E T ++++ AC+ +GSL+ G+W
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VH + + + ++ TA+IDMY KCG + A VF R + W+S+I M+G
Sbjct: 527 VHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
A+ F+++ S KP+ V F+ VL+AC H G+++E KYYF+LM ++ + P+ +H+
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFA 644
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
C +++L + IK M DAS WGSL++ CR H ++I K + +
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPK 511
D G Y L+SN+ A ++EE R MK + +K PG S+IE+ +V F AG +
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQ 764
Query: 512 TQEIYSLLND 521
T EIY L +
Sbjct: 765 TDEIYRFLGN 774
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 210/463 (45%), Gaps = 74/463 (15%)
Query: 29 CTTMKDFQQIHAHIIKTG-LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWN 87
C++++ Q+HAH++ TG L D + ++++ A G + + +VF P P+ + +
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFM-GSPDSSRLVFEAFPYPDSFMYG 69
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD---GAQLHGRV 144
+I+ AI L+ ++ Q K +PSV +A A G+ G ++HGR+
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRI 127
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
+K G++ D I +++ MY +G LS+A++V
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKV----------------------------- 158
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
F+ M R V W++++S + NG + +AL +F M ++GVEP TM+S++ CA LG
Sbjct: 159 --FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ VH I R F+L+ + +++ MY KCG + ++ +FE+ ++ W ++I
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
+A+ FS++ S ++P+ V+ VL++C +G I E K V E++
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR-ELD 335
Query: 385 PSIKHYT-CMVEVLGQXXXXXXXXXXI--------------------KGMT--------- 414
P+ + + +VE+ + + +GM
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 415 -----INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
I PDA T S +S+C G V + K+ V + D D
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 167/338 (49%), Gaps = 34/338 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H I + D + +LT S GD+ + +F ++ N SW +I ++R
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTM-YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD-QF 154
+ A+ F +M+ S ++P +T SV + +G +G +HG V+ L+ + +
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+S ++ +YA +CGK+ + + ++ R
Sbjct: 341 LSLALVELYA-------------------------------ECGKLSDCETVLRVVSDRN 369
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V WNS+IS Y G + +AL +F M + ++P FT+ S ++AC + G + G+ +H
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
++ R + + V ++IDMY K GS+++A VF + R + WNS++ G + NG+ E
Sbjct: 430 HVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
A+ F + S L+ + V+F+ V+ AC +G++++ K+
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 238/485 (49%), Gaps = 33/485 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
++IH +K G D S ++ + A VF +MP +L +WN++I+G+
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDC-LEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + + M+ +P + T S+ A ++ G +HG V++ + D ++
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+ ++I +Y KCG+ + + +F+ A
Sbjct: 347 NCSLIDLYF-------------------------------KCGEANLAETVFSKTQKDVA 375
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
+WN MIS Y+ G +A+EV+ M GV+P T S+L AC+ L +L+ G+ +H
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
I + E + ++L+A++DMY KCG+ + A +F P++ + W +I +G REA
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+ F ++Q LKPD V+ + VL+AC H G IDE +FS M + Y IEP I+HY+CM++
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 396 VLGQXXXXXXXXXXIKGMTINPD-ASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAG 454
+LG+ I+ D A +L S+C H + R A+ + + P DA
Sbjct: 556 ILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAS 615
Query: 455 GYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 514
Y+++ N+ A+ ++ A R+ MKE K+PGCS IE+ +V F A R H + +
Sbjct: 616 TYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAEN 675
Query: 515 IYSLL 519
+Y L
Sbjct: 676 VYECL 680
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 164/337 (48%), Gaps = 34/337 (10%)
Query: 27 NHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP-SPNLYS 85
N +++ + +H I+ GL D + + L + D A VF ++Y
Sbjct: 15 NSTKSLRRIKLVHQRILTLGLRRD-VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYI 73
Query: 86 WNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
WN+++ G+S++S + +F +L CS P T+P+V KAY LG G +H V
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
VK G D ++++++ MYA L + S
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLF-------------------------------ENSL 162
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
++F+ M R +WN++IS + ++G ++ALE+F M+ G EP+ ++ ++AC+ L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G+ +H + FEL+ V +A++DMY KC +E A EVF++ PR+ L WNS+I
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
G G + VE +++ +P + + +L AC
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 247/500 (49%), Gaps = 40/500 (8%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS-PNLYSWN 87
C + +Q+H + G + +T+ S G + A VF M + SWN
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTY-YSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
++I + + A++L+ +M+ + T SV A L G Q HG+++K
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
G ++ + + +I Y+ G C+ M +S ++F
Sbjct: 270 GFHQNSHVGSGLIDFYSKCG------------------GCDGMY----------DSEKVF 301
Query: 208 NNMAARTAVTWNSMISGYVRNGRL-KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
+ + V WN+MISGY N L +EA++ F MQ G P + + V + +AC++L S
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 267 Q-----HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
HG + S+I N +N A+I +Y K G++++A VF+R P +N
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVN----NALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAY 381
+I G A +GH EA+ + ++ S + P++++F+ VL+AC H G +DE + YF+ M +
Sbjct: 418 MIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETF 477
Query: 382 EIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRA 441
+IEP +HY+CM+++LG+ I M P + W +LL +CRKH N+ +A+RA
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERA 537
Query: 442 AQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHE 501
A ++ + P A YV+++N+ A + K+EE R M+ K+PGCS IE+ + H
Sbjct: 538 ANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Query: 502 FLAGGRLHPKTQEIYSLLND 521
F+A HP +E+ L +
Sbjct: 598 FVAEDWSHPMIREVNEYLEE 617
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 217/501 (43%), Gaps = 27/501 (5%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +HA +K+ +A ++ + S G ++YA F PN++S+N I++ +++
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNL-YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
S A LF ++ QP ++Y ++ YA L R+ KLG E D F
Sbjct: 87 DSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIAC--NSMIMGLAKCGKIDESRRLFNNM-AA 212
+ +I + L + F D + N+ + +K G + E+ +F M
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
R V+WNSMI Y ++ +AL ++ M +G + FT+ S+LNA L L G
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIE---NAIEVFERNPRRGLSCWNSIIIGLAMN 329
H + + F N V + +ID Y KCG + ++ +VF+ L WN++I G +MN
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 330 GH-EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIK 388
EAV+ F ++Q +PD SF+ V +AC +L + + K L + ++ I
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQL 448
++ + + M +A ++ ++ +HG+ A Q++ L
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRM--L 439
Query: 449 DPGDAGGYVLMSNVQAA---SNKFEEAMEQRILMKENFT---EKEPGCSSIELYGEVHEF 502
D G A + V +A K +E E MKE F E E I+L G
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR---- 495
Query: 503 LAGGRLHPKTQEIYSLLNDPG 523
G+L + I ++ PG
Sbjct: 496 --AGKLEEAERFIDAMPYKPG 514
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 3/245 (1%)
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAK 196
G LH VK + ++SN +++Y+ G LS A+ F E +V + N ++ AK
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
KI +R+LF+ + V++N++ISGY A+ +F M++ G E FT+ L
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE-RNPRRG 315
+ AC L + +H + F+ V A + Y K G + A+ VF + R
Sbjct: 147 IAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
WNS+I+ + +A+ + ++ K D + VL A L + + +
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 376 LMVNA 380
++ A
Sbjct: 265 KLIKA 269
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 21 CLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
C+T ++ ++ +QIH IK+ + + I+ + L SG++ A VF RMP
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
N S+N +I+G+++ A+ L+ ML S + P K+T+ +V A A G +G +
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 141 HG---RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD 177
K+ E + + + +I + +G L EA+R D
Sbjct: 470 FNTMKETFKIEPEAEHY--SCMIDLLGRAGKLEEAERFID 507
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 223/411 (54%), Gaps = 5/411 (1%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
+NT+IR + + + +++LF ML S VQP LT+PS+ KA + G LHG+ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K G D F+ + + Y G L ++++FD+ + V+ACNS++ + G++D +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM---QEEGVEPSEFTMVSLLNACAH 262
F M V+W ++I+G+ + G +AL VF M + + P+E T VS+L++CA+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 263 L--GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
G ++ G+ +H Y+ L + TA++DMY K G +E A+ +F++ + + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
+II LA NG ++A+E F ++SS + P+ ++ + +LTAC +D FS + +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
Y+I P+ +HY C+V+++G+ I+ + PDAS G+LL +C+ H N E+
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 441 AAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
+++ L P G YV +S A + + EA + R M E K P S
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 226/458 (49%), Gaps = 43/458 (9%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H +++ G D + + + F D+ A VF MP N SW ++ + +S
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCK-DLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN 157
+ A S+F ++ P++ LG+ N
Sbjct: 191 ELEEAKSMF------DLMPER-----------NLGSW----------------------N 211
Query: 158 TIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVT 217
++ SG L AK++FDE + D+I+ SMI G AK G + +R LF
Sbjct: 212 ALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRA 271
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI- 276
W+++I GY +NG+ EA +VFS M + V+P EF MV L++AC+ +G + E V SY+
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 277 -RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
R N F + +V A+IDM KCG ++ A ++FE P+R L + S++ G+A++G EA
Sbjct: 332 QRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+ F K+ + PD V+F +L C ++E YF LM Y I S HY+C+V
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVN 450
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+L + IK M AS WGSLL C HGN EIA+ A+ + +L+P AG
Sbjct: 451 LLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGS 510
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
YVL+SN+ AA +++ + R M EN K G S I
Sbjct: 511 YVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 174/348 (50%), Gaps = 40/348 (11%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L L C + QIHA II+ GL D S ++ +SSS ++Y+ VF R+PSP
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV-QPQKLTYPSVFKAYAQLGAGHDGAQL 140
Y WN +I+G+S +S+ + M+ + + +P + T+P V K + G G+ +
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
HG V+++G +KD + + + Y L A++VF E E + ++ ++++ K G++
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
+E++ +F+ M R +WN+++ G V++G L A ++F M +
Sbjct: 193 EEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR---------------- 236
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
++I T++ID Y K G + +A ++FE + W+
Sbjct: 237 -----------------------DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWS 273
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
++I+G A NG EA + FS++ + N+KPD +G+++AC +G +
Sbjct: 274 ALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 228/447 (51%), Gaps = 34/447 (7%)
Query: 45 TGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAIS 104
+G + + VL C S GD+ +F+ +P P++ +WN ++ G+S + AIS
Sbjct: 344 SGFQPNEVTCISVLGACFRS-GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 105 LFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA 164
F M ++P K T + + A+L G Q+HG V++ + K+ I + +I +Y+
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS 462
Query: 165 NSGLLSEAKRVFDEKV-ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMIS 223
+ ++ +FD+ + ELD IAC WNSMIS
Sbjct: 463 ECEKMEISECIFDDCINELD-IAC------------------------------WNSMIS 491
Query: 224 GYVRNGRLKEALEVFSNMQEEGVE-PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFE 282
G+ N +AL +F M + V P+E + ++L++C+ L SL HG H + ++ +
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 283 LNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL 342
+ V TA+ DMYCKCG I++A + F+ R+ WN +I G NG EAV + K+
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Query: 343 QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXX 402
SS KPD ++F+ VLTAC H G ++ S M + IEP + HY C+V+ LG+
Sbjct: 612 ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGR 671
Query: 403 XXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNV 462
+ + W LLSSCR HG+V +A+R A+K+ +LDP + YVL+SN
Sbjct: 672 LEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNT 731
Query: 463 QAASNKFEEAMEQRILMKENFTEKEPG 489
++ +++++ + LM +N K PG
Sbjct: 732 YSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 196/421 (46%), Gaps = 49/421 (11%)
Query: 15 FISDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYA 71
F+ + L + + C+ + D + H +KTGL + + +L+ A ++Y
Sbjct: 134 FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYG 193
Query: 72 YMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK----- 126
VF + PN S+ +I G +R + A+ +F M VQ + ++
Sbjct: 194 VRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPR 253
Query: 127 ----AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+ +++ G Q+H ++LG D ++N+++ +YA + ++ A+ +F E E+
Sbjct: 254 EGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV 313
Query: 183 DVIACNSMIMGLA-----------------------------------KCGKIDESRRLF 207
+V++ N MI+G + G ++ RR+F
Sbjct: 314 NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
+++ + WN+M+SGY +EA+ F MQ + ++P + T+ +L++CA L L+
Sbjct: 374 SSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR-GLSCWNSIIIGL 326
G+ +H + R N +++ +I +Y +C +E + +F+ ++CWNS+I G
Sbjct: 434 GGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF 493
Query: 327 AMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
N + +A+ F ++ Q++ L P+ SF VL++C L ++ + + L+V + +
Sbjct: 494 RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 386 S 386
S
Sbjct: 554 S 554
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 173/387 (44%), Gaps = 47/387 (12%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
GD+ A VF MP ++ SWN +I R + A+ ++ M+C P + T SV
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
A +++ G G + HG VK GL+K+ F+ N ++ MYA G +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI---------------- 189
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
+D R+F +++ V++ ++I G R ++ EA+++F M E+G
Sbjct: 190 --------------VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG 235
Query: 246 VEPSEFTMVSLLN------ACAHLGSL---QHGEWVHSYIRRNNFELNVIVLTAIIDMYC 296
V+ + ++L+ C L + + G+ +H R F ++ + +++++Y
Sbjct: 236 VQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 295
Query: 297 KCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIG 356
K + A +F P + WN +I+G ++VEF ++++ S +P+ V+ I
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCIS 355
Query: 357 VLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM--- 413
VL AC G ++ + FS + +PS+ + M+ + M
Sbjct: 356 VLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 414 TINPDASTWGSLLSSCRKHGNVEIAKR 440
+ PD +T +LSSC + +E K+
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQ 437
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
S+ + Y G +HG +V++G++ D ++ N ++ +Y G A++VFDE
Sbjct: 11 SLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR 70
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
DV + N+ + K G + E+ +F+ M R V+WN+MIS VR G ++AL V+ M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI- 301
+G PS FT+ S+L+AC+ + G H + + N+ V A++ MY KCG I
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLT 359
+ + VFE + + ++I GLA EAV+ F + ++ D V +L+
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 40/314 (12%)
Query: 18 DQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYM 73
D+ L+++ + C ++ + QIH +I+T ++ + HI + + + +I+
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC-- 472
Query: 74 VFTR-MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQ-PQKLTYPSVFKAYAQL 131
+F + ++ WN++I GF + A+ LF M + V P + ++ +V + ++L
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
+ G Q HG VVK G D F+ + MY G + A++ FD + + + N MI
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
G Y NGR EA+ ++ M G +P
Sbjct: 593 HG-------------------------------YGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 252 TMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T VS+L AC+H G ++ G E + S R + E + I+D + G +E+A ++ E
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 681
Query: 311 NPRRGLSCWNSIII 324
P + S I++
Sbjct: 682 TPYKSSSVLWEILL 695
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 284 NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ 343
+V A + CK G + A EVF+ P R + WN++I L G E +A+ + ++
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 344 SSNLKPDRVSFIGVLTACKHL 364
P R + VL+AC +
Sbjct: 131 CDGFLPSRFTLASVLSACSKV 151
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 251/495 (50%), Gaps = 37/495 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H ++ K G + ++ ++ F +S + A+ VF MP P++ SWN+++ G+ +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRF-YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQ 133
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK-DQF 154
S Q I LF+++ S+V P + ++ + A A+L GA +H ++VKLGLEK +
Sbjct: 134 SGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVV 193
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ N +I MY G + +A VF E D ++ N+++ ++ GK++ F+ M
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPD 253
Query: 215 AVT-------------------------------WNSMISGYVRNGRLKEALEVFSNMQE 243
VT WN++++GYV + + EA E F+ M
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
GV E+++ +L A A L + G +H+ + + V+V +A+IDMY KCG +++
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACK 362
A +F PR+ L WN +I G A NG EA++ F++L Q LKPDR +F+ +L C
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 363 HLGAIDEAKY-YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAST 421
H E YF +M+N Y I+PS++H ++ +GQ I+ D
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 422 WGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG--YVLMSNVQAASNKFEEAMEQRILM 479
W +LL +C +++ AK A K+ +L D Y++MSN+ A ++ E + R +M
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 480 KENFTEKEPGCSSIE 494
+E+ KE G S I+
Sbjct: 554 RESGVLKEVGSSWID 568
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 217 TWNSMISGYVRNGR---LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+W++++ R G L+ A+E+ + +G +P +V LL + G + +H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN----DGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
Y+ ++ F N + +++ Y S+E+A +VF+ P + WNS++ G +G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
E + F +L S++ P+ SF L AC L S +V + ++ C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+++ G+ + M D +W ++++SC ++G +E+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 248/496 (50%), Gaps = 21/496 (4%)
Query: 46 GLAHDHIAASRVL-TFCASSSGDIN-----YAYM----------VFTRMPSPNLYSWNTI 89
G D ++A++V C S ++ +AYM VF MP ++WN +
Sbjct: 116 GKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIM 175
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD-GAQLHGRVVKLG 148
I G + + +SLF +ML SE +P T+ S+ A + + G +H ++K G
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 149 LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFN 208
N+++ Y G +A R + L ++ NS+I K G+ +++ +F+
Sbjct: 236 WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH 295
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
+ VTW +MI+GY RNG ++AL F M + GV+ F ++L+AC+ L L H
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM 328
G+ +H + F+ V A++++Y KCG I+ A F + L WN+++ +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIK 388
+G +A++ + + +S +KPD V+FIG+LT C H G ++E F MV Y I +
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD 475
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKG----MTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
H TCM+++ G+ +T + + S+W +LL +C H + E+ + ++
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV 535
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ +P + +VL+SN+ ++ +++E + R M E +K PGCS IE+ +V F+
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVV 595
Query: 505 GGRLHPKTQEIYSLLN 520
G HP+ +E+ LN
Sbjct: 596 GDSSHPRLEELSETLN 611
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 156/344 (45%), Gaps = 36/344 (10%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
+ SG I A VF MP + +WNT++ +SR Q AI+LF + S+ +P ++
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE---K 179
++ A LG G ++ V++ G ++N++I MY A +VF +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
+V C S++ + + + +F M R A WN MISG+ G+L+ L +F
Sbjct: 135 SRNEVTWC-SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 240 NMQEEGVEPSEFTMVSLLNAC-AHLGSLQHGEWVHSYIRRNNF----------------- 281
M E +P +T SL+NAC A ++ +G VH+ + +N +
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 282 --------ELNVI-VLT-----AIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
EL I VLT +IID K G E A+EVF P + + W ++I G
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
NG +A+ FF ++ S + D ++ VL AC L + K
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 54/298 (18%)
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
++ S I LAK G+I +R++F+ M V WN+M++ Y R G +EA+ +F+ ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS--- 300
+P +++ ++L+ CA LG+++ G + S + R+ F ++ V ++IDMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 301 ------------------------------IENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
E A++VF P+R WN +I G A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
+ F ++ S KPD +F ++ AC + D + + MV+A ++ +
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNAC----SADSSNVVYGRMVHAVMLKNG---W 236
Query: 391 TCMVEV----------LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
+ VE LG I+ +T +W S++ +C K G E A
Sbjct: 237 SSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLT----QVSWNSIIDACMKIGETEKA 290
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 242/487 (49%), Gaps = 36/487 (7%)
Query: 36 QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+QIHA +K G D + S +C + D A +F +P NL +WN I
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD--DARKLFDEIPERNLETWNAFISNSV 185
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
P+ AI F++ + P +T+ + A + + G QLHG V++ G + D
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD-- 243
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
V CN +I KC +I S +F M +
Sbjct: 244 -----------------------------VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN 274
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
AV+W S+++ YV+N ++A ++ +++ VE S+F + S+L+ACA + L+ G +H+
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ + E + V +A++DMY KCG IE++ + F+ P + L NS+I G A G
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDM 394
Query: 335 AVEFFSKL--QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
A+ F ++ + P+ ++F+ +L+AC GA++ F M + Y IEP +HY+C
Sbjct: 395 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC 454
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+V++LG+ IK M I P S WG+L ++CR HG ++ AA+ + +LDP D
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKD 514
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
+G +VL+SN AA+ ++ EA R +K +K G S I + +VH F A R H
Sbjct: 515 SGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILN 574
Query: 513 QEIYSLL 519
+EI + L
Sbjct: 575 KEIQTTL 581
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 208/522 (39%), Gaps = 81/522 (15%)
Query: 30 TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTI 89
++M+ + +HA I+KT + + L S A +V P+ N+ SW ++
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
I G +++ A+ F +M V P T+P FKA A L G Q+H VK G
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
D F+ + MY + L +A+++FDE E
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE---------------------------- 171
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
R TWN+ IS V +GR +EA+E F + P+ T + LNAC+ L G
Sbjct: 172 ---RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
+H + R+ F+ +V V +ID Y KC I ++ +F + W S++ N
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK---------------YYF 374
+ +A + + + ++ VL+AC + ++ + +
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 375 SLMVNAYE----IEPSIKHYTCMVE--------VLGQXXXXXXXXXXI--------KGMT 414
S +V+ Y IE S + + M E ++G + +G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 415 INPDASTWGSLLSSCRKHGNVEIAKR---AAQKVCQLDPGDAGGYVLMSNVQAASNKFEE 471
P+ T+ SLLS+C + G VE + + + ++PG A Y + ++ + E
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPG-AEHYSCIVDMLGRAGMVER 467
Query: 472 AMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQ 513
A E F +K P +I ++G + R+H K Q
Sbjct: 468 AYE--------FIKKMPIQPTISVWGALQN---ACRMHGKPQ 498
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 230/471 (48%), Gaps = 38/471 (8%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
CT + Q H ++K+G+ + +L GDI+ A VF +L
Sbjct: 252 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC-GDISNARRVFNEHSHVDLVM 310
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W +I G++ + + A+SLF M E++P +T SV + G +HG +
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K+G+ D ++N ++HMYA +AK VF+ + E D+
Sbjct: 371 KVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDI--------------------- 408
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
V WNS+ISG+ +NG + EAL +F M E V P+ T+ SL +ACA LGS
Sbjct: 409 ----------VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 266 LQHGEWVHSYIRRNNF--ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSII 323
L G +H+Y + F +V V TA++D Y KCG ++A +F+ + W+++I
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 324 IGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI 383
G G ++E F ++ KP+ +F +L+AC H G ++E K YFS M Y
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 384 EPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQ 443
PS KHYTCMV++L + I+ M I PD +G+ L C H ++ + +
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Query: 444 KVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
K+ L P DA YVL+SN+ A+ ++ +A E R LMK+ K G S++E
Sbjct: 639 KMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 34/347 (9%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
+ + PC +L CT + +Q H + GL D A+++++ G A +V
Sbjct: 41 YAASSPCFLLLSK-CTNIDSLRQSHGVLTGNGLMGDISIATKLVSL-YGFFGYTKDARLV 98
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F ++P P+ Y W ++R + + + L+ ++ + + + KA +L
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+G ++H ++VK+ D + ++ MYA
Sbjct: 159 DNGKKIHCQLVKVP-SFDNVVLTGLLDMYA------------------------------ 187
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
KCG+I + ++FN++ R V W SMI+GYV+N +E L +F+ M+E V +E+T
Sbjct: 188 -KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYG 246
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
+L+ AC L +L G+W H + ++ EL+ ++T+++DMY KCG I NA VF +
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 315 GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
L W ++I+G NG EA+ F K++ +KP+ V+ VL+ C
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 167/343 (48%), Gaps = 39/343 (11%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
CT ++D ++IH ++K + D++ + +L A G+I A+ VF + N+
Sbjct: 152 CTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKC-GEIKSAHKVFNDITLRNVVC 209
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W ++I G+ ++ + + LF M + V + TY ++ A +L A H G HG +V
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K G+E + +++ MY G +S A+RVF+E +D++ +MI+G G ++
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN---- 325
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
EAL +F M+ ++P+ T+ S+L+ C + +
Sbjct: 326 ---------------------------EALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 266 LQHGEWVHSY-IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G VH I+ ++ NV A++ MY KC +A VFE + + WNSII
Sbjct: 359 LELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
G + NG EA+ F ++ S ++ P+ V+ + +AC LG++
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/557 (28%), Positives = 269/557 (48%), Gaps = 76/557 (13%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
++ + I AH++K+G + I+ S+ L + GDI+YA VF M ++ +WN++I
Sbjct: 80 SISGIKTIQAHMLKSGFPAE-ISGSK-LVDASLKCGDIDYARQVFDGMSERHIVTWNSLI 137
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
+ + A+ ++ M+ + V P + T SVFKA++ L + + HG V LGLE
Sbjct: 138 AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE 197
Query: 151 --------------------------------KDQFISNTIIHMYANSGLLSEAKRVFD- 177
KD + +I Y+ G +EA + F
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 178 ---EKVELD-------VIACNSM--------IMGLA--------------------KCGK 199
EKV+ + +I+C ++ I GL +C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+D+S R+F + V+W S+ISG V+NGR + AL F M + ++P+ FT+ S L
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
C++L + G +H + + F+ + + +ID+Y KCG + A VF+ +
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISL 437
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
N++I A NG REA++ F ++ + L+P+ V+ + VL AC + ++E F
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFD-SFR 496
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
+I + HY CMV++LG+ + INPD W +LLS+C+ H VE+A+
Sbjct: 497 KDKIMLTNDHYACMVDLLGR-AGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAE 555
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEV 499
R +K+ +++PGD G +LMSN+ A++ K+ +E + MK+ +K P S +E+ E
Sbjct: 556 RITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKET 615
Query: 500 HEFLAGGRL-HPKTQEI 515
H F+AG HP +++I
Sbjct: 616 HTFMAGDLFSHPNSEQI 632
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 29 CTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C +KD + IH ++K+G + + +LT S ++ + VF + PN S
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL-VDDSLRVFKCIEYPNQVS 335
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W ++I G ++ + A+ F M+ ++P T S + + L +G Q+HG V
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
K G ++D++ + +I +Y G A+ VFD E+DVI+ N+MI
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY------------- 442
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
Y +NG +EAL++F M G++P++ T++S+L AC +
Sbjct: 443 ------------------SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
++ G + R++ L ++D+ + G +E A
Sbjct: 485 VEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA 523
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 248/458 (54%), Gaps = 3/458 (0%)
Query: 66 GDINYAYMVFTRMPSPN-LYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
GDI+ A VF R P N SWNT+I G++++ + A+ + V M + ++ + ++ +V
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
+ L + G ++H RV+K G ++F+S+ I+ +Y G + A+ ++
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVF-SNMQE 243
+ +SMI+G + GK+ E++RLF++++ + V W +M GY+ + LE+ + +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
E P MVS+L AC+ ++ G+ +H + R ++ ++TA +DMY KCG++E
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
A +F+ + R +N++I G A +GHE ++ + F + KPD ++F+ +L+AC+H
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRH 506
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT-INPDASTW 422
G + E + YF M+ AY I P HYTCM+++ G+ ++G+ + DA
Sbjct: 507 RGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVIL 566
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
G+ L++C + N E+ K +K+ ++ + Y+ ++N A+S +++E R M+
Sbjct: 567 GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGK 626
Query: 483 FTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
E GCS + + H F + H +T+ IY++L+
Sbjct: 627 ELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 40/366 (10%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWN---- 87
+KD H IK+G +++++++ S SG + A VF M N+YSWN
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNL-YSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 88 ----------------------------TIIRGFSRSSTPQF-AISLFVDMLCSE---VQ 115
T++ GF+++ + AI +F +M E +
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 116 PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRV 175
T ++ K A+L G QLHG +VK G + +F +++IHMY+ G E +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 176 FDEK-VE-LDVIACNSMIMGLAKCGKIDESRRLF-NNMAARTAVTWNSMISGYVRNGRLK 232
F+ VE +D +A N+MI + G ID++ +F N ++WN++I+GY +NG +
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
EAL++ +M+E G++ E + ++LN + L SL+ G+ VH+ + +N N V + I+
Sbjct: 243 EALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIV 302
Query: 293 DMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRV 352
D+YCKCG+++ A L +S+I+G + G EA F L NL
Sbjct: 303 DVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTA 362
Query: 353 SFIGVL 358
F+G L
Sbjct: 363 MFLGYL 368
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 232/494 (46%), Gaps = 37/494 (7%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS-PNLYSWNTII 90
+ D +++H K G D S ++T S + A VF +P + WN ++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVT-SYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
G+S+ + A+ +F M V + T SV A+ G +G +HG VK G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
D +SN +I MY S L +E+ +F M
Sbjct: 295 SDIVVSNALIDMYGKSKWL-------------------------------EEANSIFEAM 323
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
R TWNS++ + G L +F M G+ P T+ ++L C L SL+ G
Sbjct: 324 DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 271 WVHSYI----RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
+H Y+ N N + +++DMY KCG + +A VF+ + + WN +I G
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
+ A++ FS + + +KPD ++F+G+L AC H G ++E + + + M Y I P+
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPT 503
Query: 387 IKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVC 446
HY C++++LG+ I + W S+LSSCR HGN ++A A +++
Sbjct: 504 SDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 447 QLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
+L+P GGYVLMSNV + K+EE ++ R M++ +K PGCS I L VH F G
Sbjct: 564 ELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGN 623
Query: 507 RLHPKTQEIYSLLN 520
+ HP+ + I+ L+
Sbjct: 624 QTHPEFKSIHDWLS 637
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 36/361 (9%)
Query: 21 CLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR 77
C+ LQ C KD+ QQIH +++ G D A L + G + A +VF
Sbjct: 63 CIATLQ-RCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG 137
+++ +N +I GF + +P A+ + +M + + P K T+PS+ K + D
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS-DV 179
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
++HG KLG + D ++ + ++ Y+ + +A++VFDE + D
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD-------------- 225
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
+V WN++++GY + R ++AL VFS M+EEGV S T+ S+L
Sbjct: 226 ----------------DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVL 269
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
+A G + +G +H + +++V A+IDMY K +E A +FE R L
Sbjct: 270 SAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLF 329
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
WNS++ G + F ++ S ++PD V+ VL C L ++ + + M
Sbjct: 330 TWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Query: 378 V 378
+
Sbjct: 390 I 390
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 17/279 (6%)
Query: 150 EKDQFISNTIIHMY-ANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFN 208
++ ++S IH + G L ++ R A S++ AKCG + + +F
Sbjct: 72 QRKDYVSGQQIHGFMVRKGFLDDSPR-----------AGTSLVNMYAKCGLMRRAVLVFG 120
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
+ R +N++ISG+V NG +A+E + M+ G+ P ++T SLL + L
Sbjct: 121 G-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSD 178
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC-WNSIIIGLA 327
+ VH + F+ + V + ++ Y K S+E+A +VF+ P R S WN+++ G +
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSI 387
+A+ FSK++ + R + VL+A G ID + L V I
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS-GSDI 297
Query: 388 KHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLL 426
++++ G+ + M D TW S+L
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T ++ L CA G+ +H ++ R F + + T++++MY KCG + A+ VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG- 120
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
R + +N++I G +NG +A+E + +++++ + PD+ +F +L + D
Sbjct: 121 GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 371 KYY 373
K +
Sbjct: 181 KVH 183
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 236/487 (48%), Gaps = 37/487 (7%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR-- 95
IH + K G+ D + + +L A + G + A +F+ MPS N+ ++N +I GF +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKN-GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 96 ---SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
A LF+DM ++P T+ V KA + G Q+H + K + D
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+FI + +I +YA G + + F + D+
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDI---------------------------- 424
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+W SMI +V+N +L+ A ++F + + P E+T+ +++ACA +L GE +
Sbjct: 425 ---ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
Y ++ + V T+ I MY K G++ A +VF ++ ++++I LA +G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
EA+ F +++ +KP++ +F+GVL AC H G + + YF M N Y I P+ KH+TC
Sbjct: 542 NEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC 601
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+V++LG+ I TW +LLSSCR + + I KR A+++ +L+P
Sbjct: 602 LVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEA 661
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
+G YVL+ N+ S A E R LM++ +KEP S I + + H F HP +
Sbjct: 662 SGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSS 721
Query: 513 QEIYSLL 519
Q IY++L
Sbjct: 722 QMIYTML 728
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 150/303 (49%), Gaps = 39/303 (12%)
Query: 67 DINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
++ +A +F RMP N+ S+N++I G+++ + A+ LF++ + ++ K TY
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIA 186
+ G LHG VV GL + F+ N +I MY+
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYS---------------------- 194
Query: 187 CNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV 246
KCGK+D++ LF+ R V+WNS+ISGYVR G +E L + + M +G+
Sbjct: 195 ---------KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 247 EPSEFTMVSLLNACA---HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
+ + + S+L AC + G ++ G +H Y + E +++V TA++DMY K GS++
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 304 AIEVFERNPRRGLSCWNSIIIGL-----AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
AI++F P + + +N++I G + EA + F +Q L+P +F VL
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 359 TAC 361
AC
Sbjct: 366 KAC 368
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%)
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
KC ++ +R+LF+ M R +++NS+ISGY + G ++A+E+F +E ++ +FT
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L C L GE +H + N V ++ +IDMY KCG ++ A+ +F+R R
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
WNS+I G G E + +K+ L + VL AC
Sbjct: 214 QVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC 259
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 35/276 (12%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
T++ +QIHA I K D S ++ A G F ++ SW ++I
Sbjct: 373 TLEYGRQIHALICKNNFQSDEFIGSALIELYALM-GSTEDGMQCFASTSKQDIASWTSMI 431
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
++ + A LF + S ++P++ T + A A A G Q+ G +K G++
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
+ + I MYA SG + A +VF E DV ++MI LA+
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQ-------------- 537
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
+G EAL +F +M+ G++P++ + +L AC H G + G
Sbjct: 538 -----------------HGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG- 579
Query: 271 WVHSYIRRNNFELNVIV--LTAIIDMYCKCGSIENA 304
+ +N++ +N T ++D+ + G + +A
Sbjct: 580 LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDA 615
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L A GS+ G+ H ++ +++ + +L +++MYCKC + A ++F+R P R
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+ +NS+I G G +A+E F + + +NLK D+ ++ G L C +D +
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 376 LMV 378
L+V
Sbjct: 173 LVV 175
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 248/484 (51%), Gaps = 36/484 (7%)
Query: 36 QQIHAHIIKTGL-AHDHIAASRVLTFC-ASSSGDINYAYMVFTRMPSPNLYSWNTIIRGF 93
+Q H +K GL +H+ + + V + S +G+ A V +P +L +++ + G+
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE---AIRVLDDLPYCDLSVFSSALSGY 212
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
+ + + + LTY S + ++ L + Q+H R+V+ G
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG----- 267
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+ +VE AC ++I KCGK+ ++R+F++ A+
Sbjct: 268 ----------------------FNAEVE----ACGALINMYGKCGKVLYAQRVFDDTHAQ 301
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+++ Y ++ +EAL +FS M + V P+E+T LLN+ A L L+ G+ +H
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ ++ + +V+V A+++MY K GSIE+A + F R + WN++I G + +G R
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGR 421
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
EA+E F ++ + P+R++FIGVL AC H+G +++ +YF+ ++ ++++P I+HYTC+
Sbjct: 422 EALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
V +L + ++ I D W +LL++C N + K+ A+ + P D+
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDS 541
Query: 454 GGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQ 513
G YVL+SN+ A S ++E + R LM +KEPG S I + + H FLA HP+
Sbjct: 542 GVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEIT 601
Query: 514 EIYS 517
IY+
Sbjct: 602 LIYA 605
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 38/402 (9%)
Query: 36 QQIHAHIIKT---GLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRG 92
+ IHAH+I T A D + ++ + A +F MP N+ SW +++G
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARKLFDLMPERNVVSWCAMMKG 109
Query: 93 FSRSSTPQFAISLFVDMLCS-EVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
+ S + LF M S E +P + VFK+ + G +G Q HG +K GL
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+F+ NT+++MY+ EA RV D D+ C+ +
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLD-----DLPYCDLSV-------------------- 204
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
++S +SGY+ G KE L+V E + T +S L ++L L
Sbjct: 205 ------FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ 258
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VHS + R F V A+I+MY KCG + A VF+ + + +I+ +
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
EA+ FSK+ + + P+ +F +L + L + + L++ + +
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGN 377
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+V + + GMT D TW +++S C HG
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 256 LLNACAHLGSLQHGEWVHSYI---RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
LL CA+ L+ GE +H+++ +++ + + ++I++Y KC A ++F+ P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFF-SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
R + W +++ G +G + E ++ F S S +P+ V +C + G I+E K
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 372 YY 373
+
Sbjct: 157 QF 158
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/557 (27%), Positives = 251/557 (45%), Gaps = 106/557 (19%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH H IKTG D + +L A Y+ T N +W +++ G+S+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG------- 148
+ AI F D+ Q + T+PSV A A + A G Q+H +VK G
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 149 -----------------------LEKDQFIS-NTIIHMYANSGLLSEAKRVFDEKVELD- 183
+E D +S N++I GL+ EA +F E D
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 184 ---------VIAC------------------------------NSMIMGLAKCGKIDESR 204
++ C N+++ AK G +D +
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
++F M + ++W ++++G NG EAL++F NM+ G+ P + S+L+A A L
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
L+ G+ VH ++ F ++ V +++ MY KCGS+E+A +F R L W +I+
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIE 384
G A NG +++A+ YF M Y I
Sbjct: 505 GYAKNG-----------------------------------LLEDAQRYFDSMRTVYGIT 529
Query: 385 PSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK 444
P +HY CM+++ G+ + M + PDA+ W ++L++ RKHGN+E +RAA+
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 445 VCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
+ +L+P +A YV +SN+ +A+ + +EA R LMK KEPGCS +E G+VH F++
Sbjct: 590 LMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMS 649
Query: 505 GGRLHPKTQEIYSLLND 521
R HP+ EIYS +++
Sbjct: 650 EDRRHPRMVEIYSKVDE 666
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 32/297 (10%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
S+S ++ A +F P N SWN +I G+ +S + A +LF +M ++P + T
Sbjct: 70 SNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLG 129
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
SV + L G Q+HG +K G + D + N ++ MYA
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYA------------------ 171
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAA-RTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+C +I E+ LF M + VTW SM++GY +NG +A+E F ++
Sbjct: 172 -------------QCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+ EG + +++T S+L ACA + + + G VH I ++ F+ N+ V +A+IDMY KC +
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
E+A + E + WNS+I+G G EA+ F ++ ++K D + +L
Sbjct: 279 ESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 150/285 (52%), Gaps = 3/285 (1%)
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
++ + SN ++ + SG + EA+++FD+ E D N+MI+ + ++ ++ +LF +
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
+ ++WN++ISGY ++G EA +F MQ +G++P+E+T+ S+L C L L G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPRRGLSCWNSIIIGLAM 328
E +H + + F+L+V V+ ++ MY +C I A +FE + W S++ G +
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIK 388
NG +A+E F L+ + ++ +F VLTAC + A +V + + +I
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIY 263
Query: 389 HYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+ ++++ + ++GM ++ D +W S++ C + G
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 135/296 (45%), Gaps = 16/296 (5%)
Query: 30 TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTI 89
T MK H I+KTG A + + ++ A G ++ A VF M ++ SW +
Sbjct: 343 TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKR-GIMDSALKVFEGMIEKDVISWTAL 401
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
+ G + + + A+ LF +M + P K+ SV A A+L G Q+HG +K G
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF 461
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
++N+++ MY G L +A +F+ D+I +I+G AK G +++++R F++
Sbjct: 462 PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDS 521
Query: 210 MAARTAVT-----WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG 264
M +T + MI + R+G + ++ M+ VEP ++L A G
Sbjct: 522 MRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME---VEPDATVWKAILAASRKHG 578
Query: 265 SLQHGEWVHSYIRRNNFEL---NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
++++GE + EL N + + +MY G + A V R +S
Sbjct: 579 NIENGERAAKTL----MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 232/489 (47%), Gaps = 36/489 (7%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
QIH +K G + L S G IN A VF R+ +L SWN +I GF +
Sbjct: 128 QIHGFCLKIGFEM-MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 97 STPQFAISLFVDMLCSEVQ--PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE--KD 152
A+ F M + ++ P + T S+ KA + G + G Q+HG +V+ G
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
I+ +++ +Y KCG + +R+ F+ +
Sbjct: 247 ATITGSLVDLYV-------------------------------KCGYLFSARKAFDQIKE 275
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+T ++W+S+I GY + G EA+ +F +QE + F + S++ A L+ G+ +
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
+ + L VL +++DMY KCG ++ A + F + + W +I G +G
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+++V F ++ N++PD V ++ VL+AC H G I E + FS ++ + I+P ++HY C
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+V++LG+ I M I P+ W +LLS CR HG++E+ K + + ++D +
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKT 512
YV+MSN+ + + E R L +KE G S +E+ EVH F +G HP T
Sbjct: 516 PANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLT 575
Query: 513 QEIYSLLND 521
I L +
Sbjct: 576 PVIQETLKE 584
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 172/348 (49%), Gaps = 38/348 (10%)
Query: 37 QIHAHIIKTGLAHDHIAASRVL-TFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q+H +++K+G + I ++ ++ +C + AY VF MP N+ SW+ ++ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLM--AYKVFDSMPERNVVSWSALMSGHVL 84
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + ++SLF +M + P + T+ + KA L A G Q+HG +K+G E +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N+++ MY+ G ++EA++VF V+ +I+ N
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN--------------------------- 177
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVE--PSEFTMVSLLNACAHLGSLQHGEWVH 273
+MI+G+V G +AL+ F MQE ++ P EFT+ SLL AC+ G + G+ +H
Sbjct: 178 ----AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 233
Query: 274 SYIRRNNFEL--NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
++ R+ F + + +++D+Y KCG + +A + F++ + + W+S+I+G A G
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
EA+ F +LQ N + D + ++ + + K +L V
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK 341
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
L++I N +I KC + + ++F++M R V+W++++SG+V NG LK +L +FS M
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 98
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+G+ P+EFT + L AC L +L+ G +H + + FE+ V V +++DMY KCG I
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 302 ENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLK--PDRVSFIGVLT 359
A +VF R R L WN++I G G+ +A++ F +Q +N+K PD + +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 360 ACKHLGAIDEAKYYFSLMVNA 380
AC G I K +V +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRS 239
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 132/315 (41%), Gaps = 43/315 (13%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASS----SGDINY 70
D+ LT L C++ +QIH ++++G H +S +T G +
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF---HCPSSATITGSLVDLYVKCGYLFS 265
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A F ++ + SW+++I G+++ A+ LF + Q S+ +A
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
G Q+ VKL + + N+++ MY GL+ EA++ F E DVI+ +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
I G Y ++G K+++ +F M +EP E
Sbjct: 386 ITG-------------------------------YGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 251 FTMVSLLNACAHLGSLQHGEWVHS-YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
+++L+AC+H G ++ GE + S + + + V ++D+ + G ++ A + +
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 310 RNP-RRGLSCWNSII 323
P + + W +++
Sbjct: 475 TMPIKPNVGIWQTLL 489
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+VS+L C G G VH Y+ ++ LN+I +IDMYCKC A +VF+ P
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
R + W++++ G +NG + ++ FS++ + P+ +F L AC L A+++
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 239/485 (49%), Gaps = 32/485 (6%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
+++ ++++ ++ G + +R+L G I A +F +P NLYS+ +II
Sbjct: 138 SIRCVKRVYGFMMSNGFEPEQYMMNRILLM-HVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
GF A LF M + T+ + +A A LG+ + G QLH +KLG+
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
+ F+S +I MY+ KCG I+++R F M
Sbjct: 257 DNTFVSCGLIDMYS-------------------------------KCGDIEDARCAFECM 285
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
+T V WN++I+GY +G +EAL + +M++ GV +FT+ ++ L L+ +
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
H+ + RN FE ++ TA++D Y K G ++ A VF++ PR+ + WN+++ G A +G
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
+AV+ F K+ ++N+ P+ V+F+ VL+AC + G ++ F M + I+P HY
Sbjct: 406 RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY 465
Query: 391 TCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP 450
CM+E+LG+ I+ + + W +LL++CR N+E+ + A+K+ + P
Sbjct: 466 ACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGP 525
Query: 451 GDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHP 510
G YV+M N+ + K EA ++ P C+ +E+ + H FL+G R
Sbjct: 526 EKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDS 585
Query: 511 KTQEI 515
+ +
Sbjct: 586 YNETV 590
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ-----EEGVEPSEFTMVSLLNAC 260
L + +++ VT S I V R +EA E+F ++ + GV T +L+ AC
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVS----TYDALVEAC 133
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
L S++ + V+ ++ N FE ++ I+ M+ KCG I +A +F+ P R L +
Sbjct: 134 IRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYY 193
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
SII G G+ EA E F + + +F +L A LG+I
Sbjct: 194 SIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI 240
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 248/538 (46%), Gaps = 76/538 (14%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+ D + IH+H+ + A D + ++ F A G++ A VF MP ++ +WN +I
Sbjct: 119 IDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC-GELEMAIKVFDEMPKRDMVAWNAMIS 177
Query: 92 GFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHG-------- 142
GFS I LF+DM + P T +F A + GA +G +HG
Sbjct: 178 GFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 143 -----------------------RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK 179
RV L +K++ + +I Y + ++ EA VF +
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Query: 180 VE-----------------------------------------LDVIACNSMIMGLAKCG 198
+ LD+ N++I AK G
Sbjct: 298 LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 199 KIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN 258
+ ++ R F+ + + +++NS+I+G V N R +E+ +F M+ G+ P T++ +L
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
AC+HL +L HG H Y + + +N + A++DMY KCG ++ A VF+ +R +
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
WN+++ G ++G +EA+ F+ +Q + + PD V+ + +L+AC H G +DE K F+ M
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 379 NA-YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
+ + P I HY CM ++L + + M PD G+LLS+C + N E+
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 438 AKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
++K+ L VL+SN +A+ ++E+A R++ K+ K PG S +++
Sbjct: 598 GNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 36/341 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP--NLYSWNTIIRGF 93
Q IH H++K L LT +S ++ A VF +P P N +W+ +IR +
Sbjct: 19 QVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAY 78
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
+ + + A+ L+ ML S V+P K TYP V KA A L A DG +H V D
Sbjct: 79 ASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDM 138
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
++ ++ YA KCG+++ + ++F+ M R
Sbjct: 139 YVCTALVDFYA-------------------------------KCGELEMAIKVFDEMPKR 167
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
V WN+MISG+ + L + + +F +M+ +G+ P+ T+V + A G+L+ G+ V
Sbjct: 168 DMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H Y R F +++V T I+D+Y K I A VF+ + ++ W+++I G N
Sbjct: 228 HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 333 REAVE-FFSKLQSSNLKPDRVSFIG-VLTACKHLGAIDEAK 371
+EA E FF L + N+ IG +L C G + +
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 5/182 (2%)
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFER-- 310
+SLL C +L G+ +H ++ + + L + VL + +Y C +E A VF+
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+PR W+ +I A N +A++ + K+ +S ++P + ++ VL AC L AID+
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
K S VN + + T +V+ + M D W +++S
Sbjct: 123 KLIHS-HVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFS 180
Query: 431 KH 432
H
Sbjct: 181 LH 182
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 249/505 (49%), Gaps = 47/505 (9%)
Query: 28 HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWN 87
H T +K +QIH IK G + +L S G + VF +M N+ SW
Sbjct: 288 HETDLKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
T+I SS A+S+F++M V P ++T+ + A +G ++HG +K
Sbjct: 347 TMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
G + + N+ I +YA L +AK+ F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKA-------------------------------F 430
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLG--S 265
++ R ++WN+MISG+ +NG EAL++F + E + P+E+T S+LNA A S
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDIS 489
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
++ G+ H+++ + +V +A++DMY K G+I+ + +VF ++ W SII
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
+ +G + F K+ N+ PD V+F+ VLTAC G +D+ F++M+ Y +EP
Sbjct: 550 YSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEP 609
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
S +HY+CMV++LG+ + + P S S+L SCR HGNV++ + A+
Sbjct: 610 SHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELA 669
Query: 446 CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGE------V 499
++ P +G YV M N+ A ++++A E R M++ KE G S I++ G+ +
Sbjct: 670 MEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV-GDTEGSLTM 728
Query: 500 HEFLAGGRLHPKTQEIYSLLNDPGF 524
F +G + HPK+ EIY ++ G
Sbjct: 729 QGFSSGDKSHPKSDEIYRMVEIIGL 753
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 161/395 (40%), Gaps = 81/395 (20%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
QIH +G + S + +G + A +F + P++ SWNTI+ GF +
Sbjct: 97 QIHGFSTTSGFT-SFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN 155
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
Q A++ V M + V TY + G QL VVK GLE D +
Sbjct: 156 ---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVG 212
Query: 157 NTIIHMYANSGLLSEAKRVFD------------------------------------EKV 180
N+ I MY+ SG A+RVFD E V
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 181 ELDVIACNSMIM---------------GL--------------------AKCGKIDESRR 205
ELD ++ S+I GL +KCG ++ +
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
+F+ M+ R V+W +MIS +A+ +F NM+ +GV P+E T V L+NA
Sbjct: 333 VFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
++ G +H + F V + I +Y K ++E+A + FE R + WN++I G
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
A NG EA++ F + + P+ +F VL A
Sbjct: 448 FAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 185 IACNSMIMGL-AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
+ ++ +MG+ K G+ D + +F N+ V+WN+++SG+ N + AL M+
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKS 167
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
GV FT + L+ C G + S + + E +++V + I MY + GS
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNG-HEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
A VF+ + + WNS++ GL+ G EAV F + ++ D VSF V+T C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 363 H 363
H
Sbjct: 288 H 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 203 SRRLFNNMAARTAVT-WNSMISGYVRNGRLKEALEVFS-NMQEE--GVEPSEFTMVSLLN 258
+ +LF+ + R A T N IS +R AL +F N+Q G E T+ L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
AC G L+ G +H + + F V V A++ MY K G +NA+ +FE +
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
WN+I+ G N + A+ F +++S+ + D ++ L+ C
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFC 184
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 247/507 (48%), Gaps = 37/507 (7%)
Query: 18 DQPCLTMLQNHCTTMKDF----QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
D LT++ + C T +F + IHA I +G + ++++T ++
Sbjct: 154 DHATLTIVLSVCDT-PEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS-GRG 211
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
VF M N+ + +I G + + + LF M V P +TY S A +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
+G Q+H + K G+E + I + ++ MY+ G + +A +F+ E+D ++ +++G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
LA+ NG +EA++ F M + GVE +
Sbjct: 332 LAQ-------------------------------NGSEEEAIQFFIRMLQAGVEIDANVV 360
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
++L SL G+ +HS + + F N V +I+MY KCG + ++ VF R P+
Sbjct: 361 SAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK 420
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
R WNS+I A +GH A++ + ++ + +KP V+F+ +L AC H+G ID+ +
Sbjct: 421 RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
+ M + IEP +HYTC++++LG+ I + + PD W +LL +C HG
Sbjct: 481 LNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Query: 434 NVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
+ E+ + AA+++ Q P + ++L++N+ ++ K++E + MK KE G SSI
Sbjct: 541 DTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSI 600
Query: 494 ELYGEVHEFLAGGRLHPKTQEIYSLLN 520
E+ + H F+ +LHP+ + IY +L+
Sbjct: 601 EIEHKTHSFVVEDKLHPQAEAIYDVLS 627
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 47/335 (14%)
Query: 20 PCLTMLQNHCTTMKD---FQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFT 76
PCL H + +K+ F+ + A I + L + + +L+ A G + A +F
Sbjct: 65 PCL-----HASIIKNPEFFEPVDADIHRNAL----VVWNSLLSLYAKC-GKLVDAIKLFD 114
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
MP ++ S N + GF R+ + L ML S G D
Sbjct: 115 EMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS--------------------GGFD 154
Query: 137 GAQLHGRVVKLGLEKDQF-ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
A L +V + +F + +IH A +LS +D+++ + N +I
Sbjct: 155 HATL--TIVLSVCDTPEFCLVTKMIHALA---ILSG----YDKEISVG----NKLITSYF 201
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
KCG R +F+ M+ R +T ++ISG + N ++ L +FS M+ V P+ T +S
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L AC+ + G+ +H+ + + E + + +A++DMY KCGSIE+A +FE
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVD 321
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
I++GLA NG E EA++FF ++ + ++ D
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 212/416 (50%), Gaps = 33/416 (7%)
Query: 113 EVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEA 172
+V+P+ TY + + Q G ++H ++ +G ++++ ++ +YA SG L A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 173 KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLK 232
G+ LF ++ R + WN+MISGYV+ G +
Sbjct: 163 --------------------GI-----------LFRSLKIRDLIPWNAMISGYVQKGLEQ 191
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
E L ++ +M++ + P ++T S+ AC+ L L+HG+ H+ + + + N+IV +A++
Sbjct: 192 EGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALV 251
Query: 293 DMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRV 352
DMY KC S + VF++ R + W S+I G +G E ++ F K++ +P+ V
Sbjct: 252 DMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 353 SFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKG 412
+F+ VLTAC H G +D+ +F M Y IEP +HY MV+ LG+ +
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Query: 413 MTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEA 472
WGSLL +CR HGNV++ + AA K +LDP + G YV+ +N A+ E A
Sbjct: 372 SPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAA 431
Query: 473 MEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLNDPGFAFQD 528
+ R M+ +K+PG S IEL GEVH F+ H +++IY +++ F D
Sbjct: 432 SKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMD 487
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 39/314 (12%)
Query: 24 MLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
+L C K++ ++IHA + G A + ++L A S GD+ A ++F +
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS-GDLQTAGILFRSLKI 171
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
+L WN +I G+ + Q + ++ DM + + P + T+ SVF+A + L G +
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
H ++K ++ + + + ++ MY S+ RVFD+ +VI S+I G
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG------- 284
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
Y +G++ E L+ F M+EEG P+ T + +L AC
Sbjct: 285 ------------------------YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Query: 261 AHLGSLQHGEWVHSYIRRNNF--ELNVIVLTAIIDMYCKCGSIENAIEVFERNP-RRGLS 317
H G + G W H Y + ++ E A++D + G ++ A E ++P +
Sbjct: 321 NHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 318 CWNSIIIGLAMNGH 331
W S++ ++G+
Sbjct: 380 VWGSLLGACRIHGN 393
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 13/244 (5%)
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVF--SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
R + + G GRLKEA+ + S +Q VEP + + LL C G+
Sbjct: 74 RKTEKLDKTLKGLCVTGRLKEAVGLLWSSGLQ---VEPETYAV--LLQECKQRKEYTKGK 128
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
+H+ + F LN + ++ +Y G ++ A +F R L WN++I G G
Sbjct: 129 RIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKG 188
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
E+E + + ++ + + PD+ +F V AC L ++ K ++M+ I+ +I
Sbjct: 189 LEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC-IKSNIIVD 247
Query: 391 TCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV-EIAK---RAAQKVC 446
+ +V++ + ++ + TW SL+S HG V E+ K + ++ C
Sbjct: 248 SALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 306
Query: 447 QLDP 450
+ +P
Sbjct: 307 RPNP 310
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 240/479 (50%), Gaps = 34/479 (7%)
Query: 29 CTTMK--DF-QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C+ ++ DF +QIH+ IK G + ++ S A VF M SPN+ S
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS 394
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W T+I G Q L ++M+ EV+P +T V +A ++L R V
Sbjct: 395 WTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL-----------RHV 443
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
+ LE IH Y + V+ +++ NS++ A K+D +
Sbjct: 444 RRVLE---------IHAY-----------LLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
+ +M R +T+ S+++ + G+ + AL V + M +G+ + ++ ++A A+LG+
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
L+ G+ +H Y ++ F VL +++DMY KCGS+E+A +VFE + WN ++ G
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
LA NG A+ F +++ +PD V+F+ +L+AC + D YF +M Y IEP
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
++HY +V +LG+ ++ M + P+A + +LL +CR GN+ + + A K
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 446 CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLA 504
L P D Y+L++++ S K E A + R LM E K+ G S++E+ G+VH F++
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 201/431 (46%), Gaps = 43/431 (9%)
Query: 15 FISDQPCLTMLQNHCTTMKDFQQ---------IHAHIIKTGLAHDHIAASRVLTFCASSS 65
F+S L LQ C + F + IH +IK GL + + +L+ +
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G N A +F M +++W +I F++S A+SLF +M+ S P + T+ SV
Sbjct: 73 GIWN-ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
++ A L G ++HG V+K G E + + +++ +Y+
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYS--------------------- 170
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
KCG+ E+ LF+++ ++W MIS V + +EAL+ +S M + G
Sbjct: 171 ----------KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
V P+EFT V LL A + LG L+ G+ +HS I LNV++ T+++D Y + +E+A+
Sbjct: 221 VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
V + + + W S++ G N +EAV F +++S L+P+ ++ +L+ C +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 366 AIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSL 425
++D K S + E S +V++ + + G ++P+ +W +L
Sbjct: 340 SLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 426 LSSCRKHGNVE 436
+ HG V+
Sbjct: 399 ILGLVDHGFVQ 409
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 37/340 (10%)
Query: 29 CTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYS 85
C ++D ++H +IKTG + + S L+ S G A +F+ + + + S
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSS-LSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
W +I + + A+ + +M+ + V P + T+ + A + LG G +H ++
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF-GKTIHSNII 251
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
G+ + + +++ Y+ + +A RV + E DV
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF-------------------- 291
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
W S++SG+VRN R KEA+ F M+ G++P+ FT ++L+ C+ + S
Sbjct: 292 -----------LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE-NAIEVFERNPRRGLSCWNSIII 324
L G+ +HS + FE + V A++DMY KC + E A VF + W ++I+
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
GL +G ++ ++ ++P+ V+ GVL AC L
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 241/483 (49%), Gaps = 32/483 (6%)
Query: 23 TMLQNHCTTMKDFQQIHAHIIKTG--LAHDHIAASRVLTF-----CASSSGDINYAYMVF 75
+++Q + + +K Q+H+H +G L H + ++ F C S +AY ++
Sbjct: 41 SLMQKYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLY 100
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
++ + S + S P F ++ +L + P+ +PS+ G
Sbjct: 101 DQLQRLHFLSDHN-------KSLPPFDSFTYLFLLKASSNPR---FPSLLLGIGLHGL-- 148
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLA 195
+KLG E ++ ++ MY G + +A +VFDE E + + N MI GL
Sbjct: 149 --------TLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLT 200
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMV 254
G +++ M RT V+W ++I GY R + KEA+ +FS M + ++P+E T++
Sbjct: 201 NLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITIL 260
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNF-ELNVIVLTAIIDMYCKCGSIENAIEVFERNP- 312
++L A +LG L+ VH+Y+ + F ++ V ++ID Y KCG I++A + F P
Sbjct: 261 AILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPN 320
Query: 313 -RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG-AIDEA 370
R+ L W ++I A++G +EAV F ++ LKP+RV+ I VL AC H G A +E
Sbjct: 321 GRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEF 380
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
+F+ MVN Y+I P +KHY C+V++L + + I A W LL +C
Sbjct: 381 LEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACS 440
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
+ + E+A+R +K+ +L+ G YVLMSN+ + +F +A R M K PG
Sbjct: 441 VYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGH 500
Query: 491 SSI 493
S +
Sbjct: 501 SQV 503
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 238/494 (48%), Gaps = 40/494 (8%)
Query: 31 TMKDFQQ---IHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSW 86
TM D + +H I+KTG D H+ + + + G +Y V +P+ ++ W
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL--KCGKEEASYRVLETIPNKDVVCW 314
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
+I G R + A+ +F +ML S SV + AQLG+ GA +HG V++
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
H Y LD A NS+I AKCG +D+S +
Sbjct: 375 --------------HGYT-----------------LDTPALNSLITMYAKCGHLDKSLVI 403
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE-FTMVSLLNACAHLGS 265
F M R V+WN++ISGY +N L +AL +F M+ + V+ + FT+VSLL AC+ G+
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
L G+ +H + R+ +V TA++DMY KCG +E A F+ + + W +I G
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
+G A+E +S+ S ++P+ V F+ VL++C H G + + FS MV + +EP
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
+ +H C+V++L + K P G +L +CR +G E+ + +
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 446 CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAG 505
+L PGDAG YV + + AA ++++ E M+ +K PG S IE+ G+ F
Sbjct: 644 IELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMN 703
Query: 506 GRLHPKTQEIYSLL 519
H + + SLL
Sbjct: 704 HTSH--SDDTVSLL 715
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 34/366 (9%)
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
+F +M ++ SWNT+I G++ + L M ++P + T+ + +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G LH ++VK G + D + +I MY
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYL----------------------------- 291
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
KCGK + S R+ + + V W MISG +R GR ++AL VFS M + G + S +
Sbjct: 292 --KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
S++ +CA LGS G VH Y+ R+ + L+ L ++I MY KCG ++ ++ +FER
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE 409
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP-DRVSFIGVLTACKHLGAIDEAKY 372
R L WN+II G A N +A+ F +++ ++ D + + +L AC GA+ K
Sbjct: 410 RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKL 469
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+++ ++ I P T +V++ + ++ D +WG L++ H
Sbjct: 470 IHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFH 527
Query: 433 GNVEIA 438
G +IA
Sbjct: 528 GKGDIA 533
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 44/361 (12%)
Query: 14 KFISDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINY 70
K + D L C +++ IH ++ G + D +S ++ A G + +
Sbjct: 41 KLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKF-GLLAH 99
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAY-- 128
A VF M ++ W +I +SR+ A SL +M ++P +T +
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 129 -AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC 187
QL HD A ++G FD D+
Sbjct: 160 ITQLQCLHDFAVIYG---------------------------------FD----CDIAVM 182
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
NSM+ KC + +++ LF+ M R V+WN+MISGY G + E L++ M+ +G+
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P + T + L+ + L+ G +H I + F++++ + TA+I MY KCG E + V
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
E P + + CW +I GL G +A+ FS++ S + V+ +C LG+
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 368 D 368
D
Sbjct: 363 D 363
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 34/269 (12%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
+N+ I S + +S F ML +++ P T+PS+ KA A L G +H +V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRR 205
G D +IS++++++YA GLL+ A++VF+E E DV+ +M
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAM--------------- 118
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
I Y R G + EA + + M+ +G++P T++ +L+ +
Sbjct: 119 ----------------IGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
LQ +H + F+ ++ V+ +++++YCKC + +A ++F++ +R + WN++I G
Sbjct: 163 LQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
A G+ E ++ +++ L+PD+ +F
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%)
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
+NS I+ +G K+ L FS+M + P FT SLL ACA L L G +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE 337
N F + + ++++++Y K G + +A +VFE R + W ++I + G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 338 FFSKLQSSNLKPDRVSFIGVLTA 360
++++ +KP V+ + +L+
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG 156
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 221/461 (47%), Gaps = 37/461 (8%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H ++K G+ +D I+ L S G + A ++ ++ +I+ ++
Sbjct: 266 EPLHCLVVKCGMVND-ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAE 324
Query: 96 SSTPQFAISLF--VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
A+ F LC ++ L + + G LHG +K GL
Sbjct: 325 KGDMDIAVVYFSKTRQLCMKIDAVALV--GILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
+ N +I MY+ FD+ ++ LF +
Sbjct: 383 LVVNGLITMYSK----------FDD---------------------VETVLFLFEQLQET 411
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQ-EEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
++WNS+ISG V++GR A EVF M G+ P T+ SLL C+ L L G+ +
Sbjct: 412 PLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL 471
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H Y RNNFE V TA+IDMY KCG+ A VF+ + WNS+I G +++G +
Sbjct: 472 HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQ 531
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
A+ + +++ LKPD ++F+GVL+AC H G +DE K F M+ + I P+++HY
Sbjct: 532 HRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL 591
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
MV +LG+ I M I PD++ WG+LLS+C H +E+ + A+K+ LD +
Sbjct: 592 MVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
G YVLMSN+ A +++ + R +MK+N + G S I
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 187/473 (39%), Gaps = 74/473 (15%)
Query: 25 LQNHCTTMKDF----QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
LQ T+ F +Q+ H+ K+GL + +L G + A M+F MP
Sbjct: 55 LQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL-YLKKGCVTSAQMLFDEMPE 113
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
+ WN +I G+SR+ A LF+ ML P T ++ Q G G +
Sbjct: 114 RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 173
Query: 141 HGRVVKLGLE-----KDQFIS--------------------------NTIIHMYANSGLL 169
HG K GLE K+ IS NT+I Y+ SGL
Sbjct: 174 HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 233
Query: 170 SEA----KRVFDEKVEL-----------------------------DVIACNSMIMGLAK 196
EA K +F++ VE+ D+ S++ ++
Sbjct: 234 EEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
CG + + RL+ + + V S++S Y G + A+ FS ++ ++ +V +
Sbjct: 294 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 353
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L+ C + G +H Y ++ +V+ +I MY K +E + +FE+ L
Sbjct: 354 LHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQ-SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
WNS+I G +G A E F ++ + L PD ++ +L C L ++ K
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 376 LMV-NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLS 427
+ N +E E + T ++++ + K + P +TW S++S
Sbjct: 474 YTLRNNFENENFV--CTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMIS 523
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 40/269 (14%)
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKA----YAQLGAGHDGAQLHGRVVKLGLEK 151
SS+P I++F D+L S + P T +A + + Q H + K GL++
Sbjct: 29 SSSP---ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH--LTKSGLDR 83
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
++ +++++Y G ++ A+ +FDE M
Sbjct: 84 FVYVKTSLLNLYLKKGCVTSAQMLFDE-------------------------------MP 112
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
R V WN++I GY RNG +A ++F M ++G PS T+V+LL C G + G
Sbjct: 113 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 172
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
VH ++ EL+ V A+I Y KC + +A +F + WN++I + +G
Sbjct: 173 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 232
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ EA+ F + N++ V+ I +L+A
Sbjct: 233 QEEAITVFKNMFEKNVEISPVTIINLLSA 261
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 39/485 (8%)
Query: 18 DQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D + + C +KD + +H + + L D I L G ++ A V
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVKNALVNMYLKCGRMDEARFV 275
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F RM ++ +W +I G++ + A+ L M V+P +T S+
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+DG LHG V+ + D I ++I MYA
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYA------------------------------ 365
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
KC ++D R+F+ + W+++I+G V+N + +AL +F M+ E VEP+ T+
Sbjct: 366 -KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF----ER 310
SLL A A L L+ +H Y+ + F ++ T ++ +Y KCG++E+A ++F E+
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ + + W ++I G M+G A++ F ++ S + P+ ++F L AC H G ++E
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
F M+ Y+ HYTC+V++LG+ I + P ++ WG+LL++C
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
H NV++ + AA K+ +L+P + G YVL++N+ AA ++++ + R +M+ K+PG
Sbjct: 605 THENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGH 664
Query: 491 SSIEL 495
S+IE+
Sbjct: 665 STIEI 669
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 167/338 (49%), Gaps = 35/338 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H H+I G HI ++ +T+ + G I YA +F MP +L S+N +IR + R
Sbjct: 35 KALHCHVITGGRVSGHILSTLSVTY--ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 96 SSTPQFAISLFVDMLCSEVQ--PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
AIS+F+ M+ V+ P TYP V KA +L + G +HGR+++ +D+
Sbjct: 93 EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
++ N ++ MY N GK++ +R +F+ M R
Sbjct: 153 YVQNALLAMYMN-------------------------------FGKVEMARDVFDVMKNR 181
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
++WN+MISGY RNG + +AL +F M E V+ T+VS+L C HL L+ G VH
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ + V A+++MY KCG ++ A VF+R RR + W +I G +G
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
A+E +Q ++P+ V+ +++ C +++ K
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE--PSEFT 252
A CG I +R+LF M + +++N +I YVR G +A+ VF M EGV+ P +T
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+ A L S++ G VH I R+ F + V A++ MY G +E A +VF+
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL-------- 364
R + WN++I G NG+ +A+ F + + ++ D + + +L C HL
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 365 ---------------------------GAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
G +DEA++ F M + +TCM+
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-----RRDVITWTCMINGY 294
Query: 398 GQXXXXXXXXXXIKGMT---INPDASTWGSLLSSC 429
+ + M + P+A T SL+S C
Sbjct: 295 TEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 212/391 (54%), Gaps = 16/391 (4%)
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA-NSGLLSEAKRVFDEKVELDVIACNSM 190
G D L V GL +D F + + H A G +S DV +S+
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRD-FRTGSGFHCLALKGGFIS------------DVYLGSSL 161
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
++ G+++ + ++F M R V+W +MISG+ + R+ L+++S M++ +P++
Sbjct: 162 VVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPND 221
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
+T +LL+AC G+L G VH + + + ++I MYCKCG +++A +F++
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFS-KLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
+ + WNS+I G A +G +A+E F + S KPD ++++GVL++C+H G + E
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
+ +F+LM + ++P + HY+C+V++LG+ I+ M + P++ WGSLL SC
Sbjct: 342 GRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC 400
Query: 430 RKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
R HG+V RAA++ L+P A +V ++N+ A+ ++EA R LMK+ + PG
Sbjct: 401 RVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPG 460
Query: 490 CSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
CS IE+ V F A + + EI +L+
Sbjct: 461 CSWIEINNYVFMFKAEDGSNCRMLEIVHVLH 491
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 39/308 (12%)
Query: 29 CTTMKDFQQ---IHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
C +DF+ H +K G D ++ +S V+ + SG++ AY VF MP N+
Sbjct: 130 CGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY--RDSGEVENAYKVFEEMPERNVV 187
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
SW +I GF++ + L+ M S P T+ ++ A GA G +H +
Sbjct: 188 SWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQT 247
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESR 204
+ +GL+ ISN++I MY G L +A R+FD+ DV++ NSM
Sbjct: 248 LHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM-------------- 293
Query: 205 RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS-NMQEEGVEPSEFTMVSLLNACAHL 263
I+GY ++G +A+E+F M + G +P T + +L++C H
Sbjct: 294 -----------------IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC-WNSI 322
G ++ G + + + + + + ++D+ + G ++ A+E+ E P + S W S+
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 323 IIGLAMNG 330
+ ++G
Sbjct: 397 LFSCRVHG 404
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%)
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
S+++ +G + + S + +C + G H + F +V + ++++ +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G +ENA +VFE P R + W ++I G A ++ +SK++ S P+ +F +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 359 TACKHLGAIDEAK 371
+AC GA+ + +
Sbjct: 229 SACTGSGALGQGR 241
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 25/242 (10%)
Query: 22 LTMLQNHCT---TMKDFQQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINYAYMVFTR 77
T L + CT + + +H + GL ++ HI+ S + +C GD+ A+ +F +
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC--KCGDLKDAFRIFDQ 281
Query: 78 MPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLC-SEVQPQKLTYPSVFKAYAQLGAGHD 136
+ ++ SWN++I G+++ AI LF M+ S +P +TY V + G +
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG--L 194
G + + + GL+ + + ++ + GLL EA E +E + NS+I G L
Sbjct: 342 GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL----ELIENMPMKPNSVIWGSLL 397
Query: 195 AKCG---------KIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
C + E R + A T V ++ Y G KEA V M+++G
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANL---YASVGYWKEAATVRKLMKDKG 454
Query: 246 VE 247
++
Sbjct: 455 LK 456
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 224/480 (46%), Gaps = 40/480 (8%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+ ++++W +I G + A+ +F M + V P +T S A + L + G++
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H VK+G D + N+++ MY+ G L +A++VFD DV NSMI G + G
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 200 IDESRRLFNNM----------------------------------------AARTAVTWN 219
++ LF M R TWN
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 220 SMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
+I+GY++NG+ EALE+F MQ P+ T++SLL ACA+L + +H + R
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 280 NFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFF 339
N + V A+ D Y K G IE + +F + + WNS+I G ++G A+ F
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 340 SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
+++++ + P+R + ++ A +G +DE K F + N Y I P+++H + MV + G+
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 400 XXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLM 459
I+ M I + W S L+ CR HG++++A AA+ + L+P + ++
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Query: 460 SNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
S + A K ++E ++N +K G S IE+ +H F G + T +Y L+
Sbjct: 734 SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 193/422 (45%), Gaps = 43/422 (10%)
Query: 50 DHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDM 109
D +++L+ A G I A VF M NL++W+ +I +SR + + LF M
Sbjct: 114 DVFVETKLLSMYAKC-GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 110 LCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLL 169
+ V P +P + + A G G +H V+KLG+ +SN+I+ +YA G L
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 170 SEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR---------------- 213
A + F E DVIA NS+++ + GK +E+ L M
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 214 -----------------------TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
TW +MISG + NG +AL++F M GV P+
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T++S ++AC+ L + G VHS + F +V+V +++DMY KCG +E+A +VF+
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ + WNS+I G G+ +A E F+++Q +NL+P+ +++ +++ G EA
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGSLLS 427
F M +++ + + ++ Q + M + P++ T SLL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 428 SC 429
+C
Sbjct: 533 AC 534
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 157/363 (43%), Gaps = 43/363 (11%)
Query: 73 MVFTRMPSPNLY---SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
+ FT+ PN+ ++ + R S + SLF + ++ TY + ++
Sbjct: 37 LSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQ----QGSKVKRSTYLKLLESCI 92
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS 189
G+ H G LH R L E D F+ ++ MYA
Sbjct: 93 DSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYA------------------------- 126
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
KCG I ++R++F++M R TW++MI Y R R +E ++F M ++GV P
Sbjct: 127 ------KCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
+F +L CA+ G ++ G+ +HS + + + V +I+ +Y KCG ++ A + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
R R + WNS+++ NG EAVE +++ + P V++ ++ LG D
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM---TINPDASTWGSLL 426
A M + I + +T M+ L + M + P+A T S +
Sbjct: 301 AMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 427 SSC 429
S+C
Sbjct: 360 SAC 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 42/310 (13%)
Query: 65 SGDINYAYMVFTRMPSP-----NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKL 119
+GD A +F RM N +WN II G+ ++ A+ LF M S P +
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 120 TYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK 179
T S+ A A L ++HG V++ L+ + N + YA SG + ++ +F
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
D+I NS+ I GYV +G AL +F+
Sbjct: 586 ETKDIITWNSL-------------------------------IGGYVLHGSYGPALALFN 614
Query: 240 NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV--LTAIIDMYCK 297
M+ +G+ P+ T+ S++ A +G++ G+ V Y N++ + + +A++ +Y +
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGR 673
Query: 298 CGSIENAIE-VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIG 356
+E A++ + E N + W S + G ++G A+ L S L+P+ +
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS--LEPENTATES 731
Query: 357 VLTACKHLGA 366
+++ LGA
Sbjct: 732 IVSQIYALGA 741
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 37/272 (13%)
Query: 14 KFISDQPCLTMLQNHCTTM---KDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINY 70
+F+ + + L C + K ++IH +++ L H A LT + SGDI Y
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH-AVKNALTDTYAKSGDIEY 577
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
+ +F M + ++ +WN++I G+ + A++LF M + P + T S+ A+
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 131 LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+G +G + V + D I + H C++M
Sbjct: 638 MGNVDEGKK-----VFYSIANDYHIIPALEH-------------------------CSAM 667
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAV-TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
+ + +++E+ + M ++ W S ++G +G + A+ N+ +EP
Sbjct: 668 VYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS--LEPE 725
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
S+++ LG+ + RR+N
Sbjct: 726 NTATESIVSQIYALGAKLGRSLEGNKPRRDNL 757
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 245/501 (48%), Gaps = 41/501 (8%)
Query: 19 QPCLTMLQNHCTTMKDF---QQIHAHIIKT-GLAHDHIAASRVLTFCASSSGDINYAYMV 74
Q +++ N C+ + + + IHA II + LA + + + +C S GD+ A+ V
Sbjct: 300 QFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYC--SCGDMREAFYV 357
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGA 133
F R+ +PNL SWN+II G S + + A+ ++ +L S +P + T+ + A A+
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G LHG+V KLG E+ F+ T++ MY + A++VFD E DV
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV--------- 468
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
V W MI G+ R G + A++ F M E F++
Sbjct: 469 ----------------------VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSL 506
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
S++ AC+ + L+ GE H R F+ + V A++DMY K G E A +F
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
L CWNS++ + +G +A+ FF ++ + PD V+++ +L AC H G+ + K+
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI-KGMTINPDASTWGSLLSSCRKH 432
++ M I+ KHY+CMV ++ + I + N A W +LLS+C
Sbjct: 627 WNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNT 685
Query: 433 GNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSS 492
N++I AA+++ +LDP D ++L+SN+ A + ++E+ E R ++ + K+PG S
Sbjct: 686 RNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSW 745
Query: 493 IEL-YGEVHEFLAGGRLHPKT 512
IE+ F +G + +P+
Sbjct: 746 IEVNNNNTQVFSSGDQSNPEV 766
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 165/335 (49%), Gaps = 35/335 (10%)
Query: 30 TTMKDFQQIHAHIIKTGL--AHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWN 87
T +K +QIHA ++ G A + A+ L G + A VF +MP N+ S+N
Sbjct: 108 TVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYN 167
Query: 88 TIIRGFSRSST-PQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
+ +SR+ +A L M V+P T+ S+ + A L G+ L+ +++K
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
LG + + +++ MY++ CG ++ +RR+
Sbjct: 228 LGYSDNVVVQTSVLGMYSS-------------------------------CGDLESARRI 256
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
F+ + R AV WN+MI G ++N ++++ L F NM GV+P++FT +LN C+ LGS
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGL 326
G+ +H+ I ++ ++ + A++DMYC CG + A VF R L WNSII G
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 327 AMNGHEREAVEFFSK-LQSSNLKPDRVSFIGVLTA 360
+ NG +A+ + + L+ S +PD +F ++A
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 183/404 (45%), Gaps = 34/404 (8%)
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
Y+ N +I + R S+ + A +F M PQ+ ++F A G+ LH +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKM------PQR-NIVTLFGLSAVFEYVSMGSSLHSQ 75
Query: 144 VVKLGLEKDQF------ISNTIIHMYANSGLLSEAKRVFDEKVELDVI------------ 185
++KLG + F I+++++ + ++ KR ++ V+
Sbjct: 76 IIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRA--RQIHALVLTAGAGAATESPY 133
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKE-ALEVFSNMQEE 244
A N++I +CG ++++R++F+ M R V++N++ S Y RN A + ++M E
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
V+P+ T SL+ CA L + G ++S I + + NV+V T+++ MY CG +E+A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
+F+ R WN++I+G N + + FF + S + P + ++ VL C L
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 365 GAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXX--XXXXXXXIKGMTINPDASTW 422
G+ K + ++ + S+ +L + G NP+ +W
Sbjct: 314 GSYSLGKLIHARII----VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSW 369
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAAS 466
S++S C ++G E A +++ ++ Y + + A +
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 223/424 (52%), Gaps = 17/424 (4%)
Query: 83 LYSWNTIIRGFSRSSTPQFAISLF--VDMLCSEVQPQK---------LTYPSVFKAYAQL 131
+Y++NT+I G+ + + A LF + LC + + +++ S+ KAY ++
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
G L ++ ++D NT+I Y + + +A +F E D + N M+
Sbjct: 295 GDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
G A G ++ +R F + V+WNS+I+ Y +N KEA+++F M EG +P
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF-ER 310
T+ SLL+A L +L+ G +H + + +V V A+I MY +CG I + +F E
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 311 NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+R + WN++I G A +G+ EA+ F ++S+ + P ++F+ VL AC H G +DEA
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
K F M++ Y+IEP ++HY+ +V V I M PD + WG+LL +CR
Sbjct: 530 KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
+ NV +A AA+ + +L+P + YVL+ N+ A ++EA + R+ M+ +KE G
Sbjct: 590 IYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 491 SSIE 494
S ++
Sbjct: 650 SWVD 653
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 63 SSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
+S G++ A F + P + SWN+II + ++ + A+ LF+ M +P T
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE-KVE 181
S+ A L G Q+H VVK + D + N +I MY+ G + E++R+FDE K++
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLK 472
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+VI N+MI G Y +G EAL +F +M
Sbjct: 473 REVITWNAMIGG-------------------------------YAFHGNASEALNLFGSM 501
Query: 242 QEEGVEPSEFTMVSLLNACAHLG 264
+ G+ PS T VS+LNACAH G
Sbjct: 502 KSNGIYPSHITFVSVLNACAHAG 524
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 32/328 (9%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQK--LTYP 122
SG I A +F ++ + N +WNT+I G+ + A LF +V P++ +T+
Sbjct: 53 SGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF------DVMPKRDVVTWN 106
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLE---KDQFISNTIIHMYANSGLLSEAKRVFDEK 179
++ Y G G + KL E +D F NT+I YA + + EA +F++
Sbjct: 107 TMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM 162
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
E + ++ ++MI G + G++D + LF M + + ++++G ++N RL EA V
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 240 NMQE--EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR-----------RNNFELNVI 286
G E + +L+ G ++ + I R F NV+
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN 346
++I Y K G + +A +F++ R WN++I G +A FS++ +
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR- 341
Query: 347 LKPDRVSFIGVLTACKHLGAIDEAKYYF 374
D S+ +++ +G ++ A++YF
Sbjct: 342 ---DAHSWNMMVSGYASVGNVELARHYF 366
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 42/197 (21%)
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+N ++ SG ++EA+ +F++ + + N+MI G K +++++R+LF+ M R
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 216 VTWNSMISGYVRNGR---LKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
VTWN+MISGYV G L+EA ++F M PS
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEM------PS----------------------- 133
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
R++F N +I Y K I A+ +FE+ P R W+++I G NG
Sbjct: 134 -----RDSFSWNT-----MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 333 REAVEFFSKLQSSNLKP 349
AV F K+ + P
Sbjct: 184 DSAVVLFRKMPVKDSSP 200
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 226/450 (50%), Gaps = 44/450 (9%)
Query: 41 HIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRS 96
H+I L +++ S L +S G A+ VF RM SP ++WN++I G++
Sbjct: 116 HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAEL 173
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS 156
+ A++L+ M V+P + T+P V KA +G+ G +H +VK G D ++
Sbjct: 174 GQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL 233
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
N ++ MYA G + +A+ VFD D ++ NSM
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM-------------------------- 267
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
++GY+ +G L EAL++F M + G+EP + + S+L A + S +HG +H ++
Sbjct: 268 -----LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWV 319
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAV 336
R E + V A+I +Y K G + A +F++ R WN+II + N + +
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GL 376
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
++F ++ +N KPD ++F+ VL+ C + G +++ + FSLM Y I+P ++HY CMV +
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 436
Query: 397 LGQXXXXXXXXXXI-KGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
G+ I + M + + WG+LL +C HGN +I + AAQ++ +L+P +
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 496
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFTE 485
+ L+ + + + + E+ R +M + E
Sbjct: 497 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVH----SYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
EP F SLL C L ++ HG VH Y+ RNN ++ + ++ +Y CG E
Sbjct: 91 EPEIFA--SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS----SKLVRLYASCGYAE 144
Query: 303 NAIEVFERNPRRGLS--CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
A EVF+R +R S WNS+I G A G +A+ + ++ +KPDR +F VL A
Sbjct: 145 VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 361 CKHLGAI 367
C +G++
Sbjct: 205 CGGIGSV 211
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 226/494 (45%), Gaps = 38/494 (7%)
Query: 15 FISDQPCLTMLQNHCTTM----KDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINY 70
FI + L CT M K + HA ++ + + S L D
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ 130
A+ VF +M N SW +I G + + + LF M ++P ++T SV A +
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 131 LGAGHDGA-QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNS 189
L G ++HG + G D+ ++ + MY
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC------------------------- 298
Query: 190 MIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPS 249
+CG + SR LF R V W+SMISGY G E + + + M++EG+E +
Sbjct: 299 ------RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEAN 352
Query: 250 EFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE 309
T++++++AC + L VHS I + F ++++ A+IDMY KCGS+ A EVF
Sbjct: 353 SVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFY 412
Query: 310 RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
+ L W+S+I ++GH EA+E F + + D ++F+ +L+AC H G ++E
Sbjct: 413 ELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEE 472
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSC 429
A+ F+ Y + +++HY C + +LG+ M + P A W SLLS+C
Sbjct: 473 AQTIFT-QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSAC 531
Query: 430 RKHGNVEIA-KRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEP 488
HG +++A K A ++ + +P + YVL+S + S + A E R +M+ K
Sbjct: 532 ETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCY 591
Query: 489 GCSSIELYGEVHEF 502
G S IE ++ ++
Sbjct: 592 GFSKIEPELQIEDY 605
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 137/283 (48%), Gaps = 13/283 (4%)
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
N++I +++ S +F +ML ++Y S+ + Q G ++ +L +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEML----HRDTVSYCSIINSCCQDGLLYEAMKLIKEMYF 141
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVF------DEKVELDVIACNSMIMGLAKCGKI 200
G + +++ + G S+ R+F DE+++ V+ +++ K
Sbjct: 142 YGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDH 201
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
+ +F+ M + V+W +MISG V N + +++F MQ E + P+ T++S+L AC
Sbjct: 202 AAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 261 AHL--GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
L GS E +H + R+ + + A + MYC+CG++ + +FE + R +
Sbjct: 262 VELNYGSSLVKE-IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
W+S+I G A G E + ++++ ++ + V+ + +++AC
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSAC 363
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 122 PSVFKAYA-QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
PSV KA A Q GAQLH +K G + D +SN++I MYA F K
Sbjct: 50 PSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAK----------FSRKY 99
Query: 181 ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSN 240
+ R++F+ M R V++ S+I+ ++G L EA+++
Sbjct: 100 AV---------------------RKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKE 138
Query: 241 MQEEGVEPSEFTMVSLLNACAHLGSLQH-GEWVHSYIRRN-NFELNVIVLTAIIDMYCKC 298
M G P + SLL C +GS H+ + + + +V++ TA++DMY K
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
A VF++ + W ++I G N + V+ F +Q NL+P+RV+ + VL
Sbjct: 199 DDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL 258
Query: 359 TACKHL 364
AC L
Sbjct: 259 PACVEL 264
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 223/462 (48%), Gaps = 11/462 (2%)
Query: 67 DINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
++ A +F RM + SWN +I ++ A LF M S V+ +T+ +
Sbjct: 194 NMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISG 253
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS--GLLSEAKRVFDEKVE--- 181
Q G L R+ D II + A S G + K + +
Sbjct: 254 GCLQTGNYVGALGLISRMRNFPTSLDPVA--MIIGLKACSLIGAIRLGKEIHGLAIHSSY 311
Query: 182 --LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
+D + N++I +KC + + +F + TWNS+ISGY + + +EA +
Sbjct: 312 DGIDNVR-NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLR 370
Query: 240 NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI-RRNNFELNVIVLTAIIDMYCKC 298
M G +P+ T+ S+L CA + +LQHG+ H YI RR F+ ++ +++D+Y K
Sbjct: 371 EMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430
Query: 299 GSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVL 358
G I A +V + +R + S+I G G A+ F ++ S +KPD V+ + VL
Sbjct: 431 GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 359 TACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPD 418
+AC H + E + F M Y I P ++H++CMV++ G+ I M P
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 419 ASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRIL 478
+TW +LL++C HGN +I K AA+K+ ++ P + G YVL++N+ AA+ + + E R +
Sbjct: 551 GATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTI 610
Query: 479 MKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN 520
M++ +K+PGC+ I+ F G P+ Y LL+
Sbjct: 611 MRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLD 652
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 163/356 (45%), Gaps = 8/356 (2%)
Query: 25 LQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + C ++ F Q+HAH I +G+ + + +++TF S+ N A +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTF-YSAFNLHNEAQSIIENSDIL 107
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ WN +I ++++ + I+ + M+ ++P TYPSV KA + G +H
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G + + ++ N +I MY + A+R+FD E D ++ N++I A G
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 202 ESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
E+ LF+ M + +TWN + G ++ G AL + S M+ M+ L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
AC+ +G+++ G+ +H ++++ V +I MY KC + +A+ VF + L
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
WNSII G A EA ++ + +P+ ++ +L C + + K +
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 36 QQIHAHIIKTGLAHDHIAASR-VLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
++IH I + ++D I R L S D+ +A +VF + +L +WN+II G++
Sbjct: 300 KEIHGLAIHS--SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD-Q 153
+ + + A L +ML + QP +T S+ A++ G + H +++ KD
Sbjct: 358 QLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT 417
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
+ N+++ +YA SG + AK+V D M+ R
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDL-------------------------------MSKR 446
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
VT+ S+I GY G AL +F M G++P T+V++L+AC+H + GE +
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF 506
Query: 274 SYIR-RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
++ + + ++D+Y + G + A ++ P +
Sbjct: 507 MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 211/433 (48%), Gaps = 38/433 (8%)
Query: 66 GDINYAYMVFTRMP-SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
G I+ A VF MP S + +++T++ G+ + S A+ LF M SEV T S
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
A + LG H +K+GL+ D + +I MY
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG-------------------- 273
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
K G I +RR+F+ + VTWN MI Y + G L+E + + M+ E
Sbjct: 274 -----------KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE 322
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
++P+ T V LL++CA+ + G V + L+ I+ TA++DMY K G +E A
Sbjct: 323 KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN--LKPDRVSFIGVLTACK 362
+E+F R + + W ++I G +G REAV F+K++ N ++P+ ++F+ VL AC
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
H G + E F MV AY P ++HY C+V++LG+ I+ + I D++ W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
+LL++CR +GN ++ + ++ ++ +L++ A + E++++ + N
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNEL----N 558
Query: 483 FTEKEPGCSSIEL 495
KE G S+IE+
Sbjct: 559 KGRKEAGYSAIEI 571
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 237/502 (47%), Gaps = 56/502 (11%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNT 88
C + +IH +++KTGL D A S++L F SS DI YA +F + + NL+ +NT
Sbjct: 38 CRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAF--SSVLDIRYASSIFEHVSNTNLFMFNT 95
Query: 89 IIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG 148
+IRG+S S P+ A S+F + + + ++ + K+ ++ G LHG ++ G
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 149 LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFN 208
+ N +IH Y G +S+A++VFDE + +D
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDARKVFDEMPQ-----------------SVD------- 191
Query: 209 NMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQH 268
AVT++++++GY++ + AL++F M++ V + T++S L+A + LG L
Sbjct: 192 ------AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG 245
Query: 269 GEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM 328
E H + +L++ ++TA+I MY K G I +A +F+ R+ + WN +I A
Sbjct: 246 AESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAK 305
Query: 329 NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE---IEP 385
G E V +++ +KP+ +F+G+L++C A EA + + + E I
Sbjct: 306 TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC----AYSEAAFVGRTVADLLEEERIAL 361
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG----NVEIAKRA 441
T +V++ + M + D +W +++S HG V + +
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 442 AQKVCQLDPGDAGGYVLMSNVQAASNKFEEAME--QRILMKENFTEKEPGCSSIELYGEV 499
++ C++ P + ++++ N + E + +R++ +FT K +E YG V
Sbjct: 421 EEENCKVRPNEI-TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPK------VEHYGCV 473
Query: 500 HEFLAGGRLHPKTQEIYSLLND 521
+ L GR + +E Y L+ +
Sbjct: 474 VDLL--GR-AGQLEEAYELIRN 492
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 240/497 (48%), Gaps = 60/497 (12%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYA---YMVFTRM 78
L++LQ + T+ +QIHA ++ G + + + +C+ S + + +VF R
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRF 70
Query: 79 PSPNLYSWNTIIRGFSRSSTPQFAISLFVDML--CSEVQPQKLTYPSVFKAYAQLGAGHD 136
P+ + +NT++ + S P+ +I +F + S + + T+ V A A+ +
Sbjct: 71 GHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSA 126
Query: 137 ---GAQLHGRVVKLG-LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIM 192
G +HG V KLG L + + I T++H YA +G L A++VFDE
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDE-------------- 172
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVR-----NGRLKEALEVFSNMQ--EEG 245
M RT+VTWN+MI GY N ++A+ +F G
Sbjct: 173 -----------------MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSG 215
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF--ELNVIVLTAIIDMYCKCGSIEN 303
V P++ TMV +L+A + G L+ G VH YI + F E++V + TA++DMY KCG + N
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
A VFE + + W S+ GLA+NG E +++ S +KP+ ++F +L+A +H
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
+G ++E F M + + P I+HY C+V++LG+ I M I PDA
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 424 SLLSSCRKHGNVEIAKRAAQKVCQLDPGDAG-------GYVLMSNVQAASNKFEEAMEQR 476
SL ++C +G + + + + +++ D YV +SNV A K+ E + R
Sbjct: 396 SLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLR 455
Query: 477 ILMKENFTEKEPGCSSI 493
MKE + PG S +
Sbjct: 456 KEMKERRIKTRPGYSFV 472
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 233/490 (47%), Gaps = 42/490 (8%)
Query: 36 QQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINY-AYMVFTRMPSPNLYSWNTIIRGF 93
+Q+H +K GL ++A + + + G Y A+ VF + NL +WN++I F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTY----PSVFKAYAQLG--AGHDGAQLHGRVVKL 147
+ + AI +F+ M V + T S++K+ + QLH VK
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
GL ++ +I +V+ E +E D C + M ++ C
Sbjct: 297 GLVTQTEVATALI-------------KVYSEMLE-DYTDCYKLFMEMSHC---------- 332
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
R V WN +I+ + + A+ +F +++E + P +T S+L ACA L + +
Sbjct: 333 -----RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTAR 386
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
H +H+ + + F + ++ ++I Y KCGS++ + VF+ R + WNS++ +
Sbjct: 387 HALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYS 446
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSI 387
++G + F K+ ++ PD +FI +L+AC H G ++E F M E P +
Sbjct: 447 LHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQL 503
Query: 388 KHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
HY C++++L + IK M ++PDA W +LL SCRKHGN + K AA K+ +
Sbjct: 504 NHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKE 563
Query: 448 L-DPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGG 506
L +P ++ Y+ MSN+ A F EA M+ KEP S E+ +VHEF +GG
Sbjct: 564 LVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGG 623
Query: 507 RLHPKTQEIY 516
R P + +Y
Sbjct: 624 RHRPDKEAVY 633
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
+R RS + A+SLF E+Q Q+ Y ++F+A A+ DG LH
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPV-ELQSQQ-AYAALFQACAEQRNLLDGINLHH------- 83
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
HM ++ S+ +VI N +I AKCG I +R++F+
Sbjct: 84 -----------HMLSHPYCYSQ-----------NVILANFLINMYAKCGNILYARQVFDT 121
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
M R V+W ++I+GYV+ G +E +FS+M P+EFT+ S+L +C + + G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY----EPG 176
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIE---VFERNPRRGLSCWNSIIIGL 326
+ VH + ++ V A+I MY +C A E VFE + L WNS+I
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
++A+ F ++ S + DR + + + ++
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF--EL 283
VR+G ++ A+ +F + E S+ +L ACA +L G +H ++ + +
Sbjct: 37 VRSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 284 NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ 343
NVI+ +I+MY KCG+I A +VF+ P R + W ++I G G+E+E FS +
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 344 SSNLKPDRVSFIGVLTACKH 363
S P+ + VLT+C++
Sbjct: 155 SHCF-PNEFTLSSVLTSCRY 173
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 235/503 (46%), Gaps = 75/503 (14%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
GD+ +A +F R+ ++ SW +I FSR A+ LF +M +V+ + TY SV
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
K+ LG +G Q+HG V K + + + ++ +YA G + EA+ FD E D++
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMA---------------------------------- 211
+ N+MI G D S LF M
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 212 -----ARTAVTWNSMISGYVRNGRL--------------------------------KEA 234
R++ S+++ YV+ G L +A
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY-IRRNNFELNVIVLTAIID 293
++F +M + E + S+L C + S+ G +H + ++ + +V + ++ID
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 294 MYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVS 353
MY K G IE+A+ FE + + W S+I G +G+ +A++ +++++ +KP+ V+
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 420
Query: 354 FIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM 413
F+ +L+AC H G + + M+N + IE +H +C++++L + I+
Sbjct: 421 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSK 480
Query: 414 --TINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEE 471
++ +STWG+ L +CR+HGNV+++K AA ++ ++P Y+ +++V AA+ ++
Sbjct: 481 EGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDN 540
Query: 472 AMEQRILMKENFT-EKEPGCSSI 493
A+ R LMKE+ + K PG S +
Sbjct: 541 ALNTRKLMKESGSCNKAPGYSLV 563
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 196 KCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
K G + +R+LF+ ++ R V+W +MIS + R G +AL +F M E V+ ++FT S
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+L +C LG L+ G +H + + N N+IV +A++ +Y +CG +E A F+ R
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
L WN++I G N + F + + KPD +F +L A
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 182/416 (43%), Gaps = 80/416 (19%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+K+ QIH + K A + I S +L+ A G + A + F M +L SWN +I
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARC-GKMEEARLQFDSMKERDLVSWNAMID 187
Query: 92 GFSRSSTPQFAISLFVDML----------------------CSEVQPQ------KLTY-- 121
G++ ++ + SLF ML C E+ + KL +
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 122 -----PSVFKAYAQLGAGHDGAQLH--------------------------------GRV 144
S+ AY + G+ + +LH +
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVF-----DEKVELDVIACNSMIMGLAKCGK 199
+++ + D+ + ++++ + ++ +++ ++ DV NS+I AK G+
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
I+++ F M + +W S+I+GY R+G ++A+++++ M+ E ++P++ T +SLL+A
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 260 CAHLGSLQHGEWVH-SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC 318
C+H G + G ++ + I ++ E L+ IIDM + G +E A + + G+
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR--SKEGIVS 485
Query: 319 WNSIIIGLAMNGHEREAVEFFSKLQSSNL---KPDR-VSFIGVLTACKHLGAIDEA 370
+S G ++ R SK+ ++ L +P + V++I + + GA D A
Sbjct: 486 LSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNA 541
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D+ ++ + CTT+ +QIH +K+ +A L + SG+I A +
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F M ++ SW ++I G+ R + AI L+ M ++P +T+ S+ A + G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 135 HDGAQLHGRVV-KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G +++ ++ K G+E + + II M A SG L EA + K + ++ ++
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 194 LAKC---GKIDESR---RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
L C G + S+ +M R V + ++ S Y NG AL M+E G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%)
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L C++ + +H N F N+ + +ID+Y K G +++A ++F+R +R +
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
W ++I + G+ +A+ F ++ ++K ++ ++ VL +CK LG + E
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 208/398 (52%), Gaps = 9/398 (2%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+QIH +IK G + + ++ F A G++ + + F + N+ WN ++ G++
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKC-GNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
P +SLF+ ML +P + T+ + K+ + QLH +V++G E + ++
Sbjct: 395 KDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCV----TELQQLHSVIVRMGYEDNDYV 449
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL-AKCGKIDESRRLFNNMAART 214
++++ YA + L+++A + D + +++ G+ ++ G+ ES +L + +
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPD 509
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V+WN I+ R+ +E +E+F +M + + P ++T VS+L+ C+ L L G +H
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 275 YIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
I + +F + V +IDMY KCGSI + ++VFE + L W ++I L ++G+ +
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
EA+E F + S KPDRVSFI +LTAC+H G + E F M + Y +EP + HY C
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCA 688
Query: 394 VEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRK 431
V++L + I+ M DA W + L C +
Sbjct: 689 VDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 152/367 (41%), Gaps = 74/367 (20%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G+++ A VF +MP N S+NTII+G+S+ A +F +M P + T +
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL 122
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGL-EKDQFIS---------------------------- 156
A L G QLHG +K GL D F+
Sbjct: 123 SC-ASLDV-RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 157 ---NTIIHMYANSGLLSEAKRVFDEKV----------------------ELDV------- 184
N ++ + + G L E F E V +LD+
Sbjct: 181 ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 185 -----IAC-----NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEA 234
+ C NS+I KCG + R+F + + V+WN++I ++ +A
Sbjct: 241 ATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKA 300
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
L++F +M E G P++ T VS+L + + L G +H + +N E +++ A+ID
Sbjct: 301 LKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDF 360
Query: 295 YCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
Y KCG++E++ F+ + + CWN+++ G A N + F ++ +P +F
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTF 419
Query: 355 IGVLTAC 361
L +C
Sbjct: 420 STALKSC 426
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 71/362 (19%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H K GL + I+ L G+ + A +F S ++ SWN II ++
Sbjct: 235 KQLHCSATKKGLDCE-ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
S P A+ LFV M P + TY SV + + G Q+HG ++K G E +
Sbjct: 294 SENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL 353
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N +I YA G L +++ FD + +
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDY-------------------------------IRDKNI 382
Query: 216 VTWNSMISGYV-RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
V WN+++SGY ++G + L +F M + G P+E+T + L +C + LQ +HS
Sbjct: 383 VCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCC-VTELQQ---LHS 436
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE--RNP--------------RRG--- 315
I R +E N VL++++ Y K + +A+ + + P RRG
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 316 -------------LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
WN I + + + E +E F + SN++PD+ +F+ +L+ C
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 363 HL 364
L
Sbjct: 557 KL 558
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
V CN++I K G++ + ++F+ M R V++N++I GY + G + +A VFS M+
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY-IRRNNFELNVIVLTAIIDMYCKCGSIE 302
G P++ T+ LL +CA L ++ G +H ++ F + V T ++ +Y + +E
Sbjct: 109 FGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
A +VFE P + L WN ++ L G +E + FF +L SF+GVL
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 363 HLGAIDEAK 371
+ +D +K
Sbjct: 227 CVKDLDISK 235
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 41/385 (10%)
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
AQ + DG Q+H V KLG I +++ Y++ G + A++VFDE E
Sbjct: 76 AQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPE------- 128
Query: 189 SMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
+ V W +MIS Y N EA+E+F M+ E +E
Sbjct: 129 -----------------------KQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL 165
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHS--YIRRNNFELNVIVLTAIIDMYCKCGSIENAIE 306
+ L+ACA LG++Q GE ++S R+ +++ + ++++MY K G E A +
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL------QSSNLKPDRVSFIGVLTA 360
+F+ + R+ ++ + S+I G A+NG +E++E F K+ Q + + P+ V+FIGVL A
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMA 285
Query: 361 CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDAS 420
C H G ++E K +F M+ Y ++P H+ CMV++ + I M I P+
Sbjct: 286 CSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTV 345
Query: 421 TWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMK 480
W +LL +C HGNVE+ + +++ +LD G YV +SN+ A+ ++E + R ++
Sbjct: 346 IWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVR 405
Query: 481 ENFTEKEPGCSSIELYGEVHEFLAG 505
+ + PG S IEL ++EF++G
Sbjct: 406 K---RRMPGKSWIELGSIINEFVSG 427
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 37/324 (11%)
Query: 34 DFQQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP-NLYSWNTIIR 91
D +QIHA + K G A I S V + SS GD++YA VF P N+ W +I
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFY--SSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG--L 149
++ + AI LF M +++ + A A LGA G +++ R +K L
Sbjct: 141 AYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
D + N++++MY SG +A+++FDE + DV SMI G A G+ ES LF
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
M + Q+ + P++ T + +L AC+H G ++ G
Sbjct: 261 M-------------------------KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEG 295
Query: 270 EW-VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP-RRGLSCWNSIIIGLA 327
+ S I N + ++D++C+ G +++A E + P + W +++ +
Sbjct: 296 KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACS 355
Query: 328 MNGHEREAVEFFSKLQSSNLKPDR 351
++G+ VE ++Q + DR
Sbjct: 356 LHGN----VELGEEVQRRIFELDR 375
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA----CAHLGSLQHGEWVHS 274
N + Y+ +G +AL F + + PS S+L A A S G +H+
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHA 89
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP-RRGLSCWNSIIIGLAMNGHER 333
+R+ F + + T+++ Y G ++ A +VF+ P ++ + W ++I N +
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
EA+E F ++++ ++ D V L+AC LGA+ + +S
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYS 191
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 214/414 (51%), Gaps = 5/414 (1%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQP-QKLTYPSVFKAYAQLGAGHDGAQL 140
L S + ++ + A++LF+ M S P + K+ A G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
H VK + F+ ++ MY +S A+++FDE + + + N+MI CGK+
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 201 DESRRLFNNM-AARTAVTWNSMISGYV--RNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
E+ L+ M ++N++I G V +G + A+E + M E +P+ T+++L+
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALV 189
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
+AC+ +G+ + + +HSY RN E + + + +++ Y +CGSI VF+ R +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
W+S+I A++G A++ F +++ + + PD ++F+ VL AC H G DEA YF M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 378 VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
Y + S HY+C+V+VL + I+ M P A TWG+LL +CR +G +E+
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 438 AKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
A+ AA+++ ++P + YVL+ + + + EEA R+ MKE+ + PG S
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 213/433 (49%), Gaps = 37/433 (8%)
Query: 66 GDINYAYMVFTRMP-SPNLYSWNTIIRGFSRSSTPQFAISLFVDM-LCSEVQPQKLTYPS 123
GD+ A++ M + +L SWN++I G + S ++ F M +++ +T
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD 183
A LG G HG +K E D + NT+I MY
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYG------------------- 627
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
+C I+ + ++F ++ +WN +IS +N +E ++F N++
Sbjct: 628 ------------RCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK- 674
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
+EP+E T V LL+A LGS +G H ++ R F+ N V A++DMY CG +E
Sbjct: 675 --LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLET 732
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS-SNLKPDRVSFIGVLTACK 362
++VF + +S WNS+I +G +A+E F +L S S ++P++ SFI +L+AC
Sbjct: 733 GMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
H G IDE Y+ M + ++P +H +V++LG+ I G+ A W
Sbjct: 793 HSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVW 852
Query: 423 GSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
G+LLS+C HG+ ++ K A+ + +++P +A Y+ ++N +EEA+ R ++++N
Sbjct: 853 GALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDN 912
Query: 483 FTEKEPGCSSIEL 495
+K PG S I++
Sbjct: 913 ALKKLPGYSVIDV 925
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/563 (21%), Positives = 233/563 (41%), Gaps = 81/563 (14%)
Query: 17 SDQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAY 72
+D + + + C+++++ + +H +IK+G + + H++ + S GD A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQL 131
VF + ++ S N I+ GF+ + + A + M ++QP T S+ L
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 132 GAGHDGAQLHGRVVKLGLEKDQF-ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM 190
+G +HG V++ ++ + N++I MY GL ++A+ +F D+++ NSM
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 191 IMGLAK-------------------CGKIDESR--------------------------- 204
I ++ C K S
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 526
Query: 205 --------RLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG-VEPSEFTMVS 255
RL R +WNS+ISG +G E+L F M EG + T++
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
++A +LG + G H ++ EL+ + +I MY +C IE+A++VF
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA-KYYF 374
L WN +I L+ N RE + F L+ L+P+ ++F+G+L+A LG+ + +
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 375 SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
L+ ++ P + +V++ + +N S W S++S+ HG
Sbjct: 704 HLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHGFHGM 760
Query: 435 VEIAKRAAQKV---CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK---EP 488
E A +++ +++P + L+S + S +E + M+E F K E
Sbjct: 761 GEKAMELFKELSSNSEMEPNKSSFISLLSAC-SHSGFIDEGLSYYKQMEEKFGVKPVTEH 819
Query: 489 GCSSIELYG------EVHEFLAG 505
+++ G E +EF+ G
Sbjct: 820 RVWIVDMLGRAGKLREAYEFITG 842
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 187/436 (42%), Gaps = 58/436 (13%)
Query: 38 IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSS 97
+H I+TGL D + ++ A +++ A VFT M ++ SWNTI+ +
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGE-NLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 98 TPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFIS- 156
P+ ++ F M S + +T+ V A + + G LHG V+K G + +S
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 157 -NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N+II MY+ KCG + + +F + R
Sbjct: 329 GNSIISMYS-------------------------------KCGDTEAAETVFEELVCRDV 357
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
++ N++++G+ NG +EA + + MQ + ++P T+VS+ + C L + G VH
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 275 YIRRNNFELNVI-VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
Y R + + V+ ++IDMY KCG A +F+ R L WNS+I + NG
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 334 EAVEFFSKLQS--SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
+A F ++ S S K + + +LT+C D + SL+ K
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSC------DSSD---SLIFG--------KSVH 520
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
C ++ LG ++ M+ D ++W S++S C G+ + RA Q + +
Sbjct: 521 CWLQKLGD---LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKI 577
Query: 452 DAGGYVLMSNVQAASN 467
L+ + A+ N
Sbjct: 578 RHDLITLLGTISASGN 593
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 185/413 (44%), Gaps = 36/413 (8%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ +H +K GL D +S++LTF +G++ + +F + ++ WN++I ++
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTF-YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQ 165
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ A+ LF++M+ + T A + L + LH ++ GL D +
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
N ++++YA LS A+ VF +M R
Sbjct: 226 CNALMNLYAKGENLSSAECVF-------------------------------THMEHRDI 254
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+WN++++ + NG +++L+ F +M G E T +++AC+ + L GE +H
Sbjct: 255 VSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGL 314
Query: 276 IRRNNF--ELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+ ++ + E +V V +II MY KCG E A VFE R + N+I+ G A NG
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFE 374
Query: 334 EAVEFFSKLQSSN-LKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
EA +++QS + ++PD + + + + C L E + V +++
Sbjct: 375 EAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINS 434
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
++++ G+ K T + D +W S++S+ ++G AK ++V
Sbjct: 435 VIDMYGKCGLTTQAELLFK-TTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 241/472 (51%), Gaps = 12/472 (2%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWN 87
C ++ Q+H +K+G + ++ S V + S G+ A +F ++P ++ ++N
Sbjct: 142 CGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY--SRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 88 TIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
I G + S+F M S +P +T+ + A A L G QLHG V+K
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDE-KVELDVIACNSMIMGLAKCGKIDESRR 205
+ + + +I MY+ A VF E K ++I+ NS+I G+ G+ + +
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 206 LFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
LF + + + TWNS+ISG+ + G++ EA + F M + PS + SLL+AC+
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPR-RGLSCW 319
+ +L++G+ +H ++ + E ++ VLT++IDMY KCG A +F+R P+ + W
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
N +I G +G A+E F L+ ++P +F VL+AC H G +++ F LM
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
Y +PS +H CM+++LG+ I M+ + SLL SCR+H + + +
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGE 558
Query: 440 RAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
AA K+ +L+P + +V++S++ AA ++E+ R ++ + K PG S
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 169/374 (45%), Gaps = 39/374 (10%)
Query: 25 LQNHCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L C + D Q +HA ++KTG D A+ +++ + A V MP
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK-QVTDALKVLDEMPER 95
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ S N + G + + A +F D S +T SV + G QLH
Sbjct: 96 GIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI---EGGMQLH 152
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
+K G E + ++ +++ MY+ G A R+F++ V+ N+ I GL + G ++
Sbjct: 153 CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMN 212
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
+FN M FS+ EP++ T V+ + ACA
Sbjct: 213 LVPSVFNLMRK-------------------------FSSE-----EPNDVTFVNAITACA 242
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF-ERNPRRGLSCWN 320
L +LQ+G +H + + F+ +V TA+IDMY KC ++A VF E R L WN
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
S+I G+ +NG AVE F KL S LKPD ++ +++ LG + EA +F M++
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 381 YEIEPSIKHYTCMV 394
+ PS+K T ++
Sbjct: 363 VMV-PSLKCLTSLL 375
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 149/356 (41%), Gaps = 71/356 (19%)
Query: 116 PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRV 175
P K T+P + K+ A+LG G LH +VVK G D F + ++ MY +++A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 176 FDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEAL 235
DE M R + N+ +SG + NG ++A
Sbjct: 89 LDE-------------------------------MPERGIASVNAAVSGLLENGFCRDAF 117
Query: 236 EVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMY 295
+F + + G + T+ S+L C G ++ G +H ++ FE+ V V T+++ MY
Sbjct: 118 RMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 296 CKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS-SNLKPDRVSF 354
+CG A +FE+ P + + +N+ I GL NG F+ ++ S+ +P+ V+F
Sbjct: 175 SRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTF 234
Query: 355 IGVLTACKHL----------GAIDEAKYYFSLMVNAYEIEPSIK------HYTCMVEVLG 398
+ +TAC L G + + ++ F MV I+ K Y E L
Sbjct: 235 VNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE-LK 293
Query: 399 QXXXXXXXXXXIKGMTIN-------------------PDASTWGSLLSSCRKHGNV 435
I GM IN PD++TW SL+S + G V
Sbjct: 294 DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKV 349
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 223/461 (48%), Gaps = 36/461 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTR---MPSPNLYSWNTIIRG 92
+Q+H ++K+GL A S ++ S+ G + YA VF + + ++ WN+++ G
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDM-YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
F + + A+ L + + S++ T K G Q+H VV G E D
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAA 212
+ + ++ ++AN G I ++ +LF+ +
Sbjct: 377 YIVGSILVDLHAN-------------------------------VGNIQDAHKLFHRLPN 405
Query: 213 RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+ + ++ +I G V++G A +F + + G++ +F + ++L C+ L SL G+ +
Sbjct: 406 KDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H + +E + TA++DMY KCG I+N + +F+ R + W II+G NG
Sbjct: 466 HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRV 525
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
EA +F K+ + ++P++V+F+G+L+AC+H G ++EA+ M + Y +EP ++HY C
Sbjct: 526 EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC 585
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
+V++LGQ I M + PD + W SLL++C H N + A+K+ + P D
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDD 645
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
Y +SN A +++ + R K+ KE G S I
Sbjct: 646 PSVYTSLSNAYATLGMWDQLSKVREAAKK-LGAKESGMSWI 685
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 171/341 (50%), Gaps = 9/341 (2%)
Query: 28 HCTTMKDFQQ---IHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLY 84
HC ++ F++ I AH+IK G++ + A+ V++ ++ A+ VF M N+
Sbjct: 14 HCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFR-LLSDAHKVFDEMSERNIV 72
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQP-QKLTYPSVFKAYAQLGAGHDGAQLHGR 143
+W T++ G++ P AI L+ ML SE + + Y +V KA +G G ++ R
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES 203
+ K L D + N+++ MY +G L EA F E + + N++I G K G +DE+
Sbjct: 133 IGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEA 192
Query: 204 RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
LF+ M V+WN +ISG+V G ALE MQ EG+ F + L AC+
Sbjct: 193 VTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP---RRGLSCWN 320
G L G+ +H + ++ E + ++A+IDMY CGS+ A +VF + ++ WN
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
S++ G +N A+ ++ S+L D + G L C
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC 352
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 171/385 (44%), Gaps = 33/385 (8%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
+G ++ A +F RMP PN+ SWN +I GF +P+ A+ V M + P
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCG 244
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
KA + G G QLH VVK GLE F + +I MY+N G L A VF + +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ----EK 300
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
+A NS + WNSM+SG++ N + AL + + +
Sbjct: 301 LAVNS------------------------SVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
+ +T+ L C + +L+ G VHS + + +EL+ IV + ++D++ G+I++A
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 305 IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
++F R P + + ++ +I G +G A F +L L D+ +L C L
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL 456
Query: 365 GAIDEAKYYFSLMV-NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWG 423
++ K L + YE EP T +V++ + GM + D +W
Sbjct: 457 ASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWT 513
Query: 424 SLLSSCRKHGNVEIAKRAAQKVCQL 448
++ ++G VE A R K+ +
Sbjct: 514 GIIVGFGQNGRVEEAFRYFHKMINI 538
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L C + + + GE + +++ + NV + +I MY + +A +VF+ R +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSK-LQSSNLKPDRVSFIGVLTACKHLGAI 367
W +++ G +G +A+E + + L S + + VL AC +G I
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 42/505 (8%)
Query: 18 DQPCLTMLQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMV 74
D +T + CT M+D + +H I+ G + L S D++ A+ V
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 284
Query: 75 FTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAG 134
F N+ SWN+I+ GF + A+ +F M+ V+ ++T S+ +
Sbjct: 285 FDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQP 344
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGL 194
+HG +++ G E ++ +A +S+I
Sbjct: 345 LPCKSIHGVIIRRGYESNE-------------------------------VALSSLIDAY 373
Query: 195 AKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
C +D++ + ++M + V+ ++MISG GR EA+ +F +M++ P+ T++
Sbjct: 374 TSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVI 430
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVI-VLTAIIDMYCKCGSIENAIEVFERNPR 313
SLLNAC+ L+ +W H R + +N I V T+I+D Y KCG+IE A F++
Sbjct: 431 SLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITE 490
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+ + W II A+NG +A+ F +++ P+ V+++ L+AC H G + +
Sbjct: 491 KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMI 550
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM--TINPDASTWGSLLSSCR- 430
F MV + +PS++HY+C+V++L + IK + + AS WG++LS CR
Sbjct: 551 FKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRN 609
Query: 431 KHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGC 490
+ + I +V +L+P + GY+L S+ AA +E+ R L+KE G
Sbjct: 610 RFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGY 669
Query: 491 SSIELYGEVHEFLAGGRLHPKTQEI 515
S + FLAG +L E+
Sbjct: 670 SMVREGNLAKRFLAGDKLSQSDSEL 694
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
GD+ F M S + SWN I+ G + + F + +P T V
Sbjct: 75 GDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVI 134
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
A L DG ++HG V++ G + N+I+ MYA+S LS
Sbjct: 135 HACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS--------------- 177
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEE 244
+R+LF+ M+ R ++W+ +I YV++ L++F M E
Sbjct: 178 -----------------ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 220
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIEN 303
EP T+ S+L AC + + G VH + R F+L +V V ++IDMY K +++
Sbjct: 221 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
A VF+ R + WNSI+ G N EA+E F + ++ D V+ + +L CK
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCK 339
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
NS+ KCG + R F+ M +R +V+WN ++ G + G +E L FS ++ G E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P+ T+V +++AC L GE +H Y+ R+ F V +I+ MY S+ +A ++
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKL 181
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGA 366
F+ R + W+ +I + ++ F ++ + +PD V+ VL AC +
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 367 IDEAK 371
ID +
Sbjct: 242 IDVGR 246
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 228 NGRLKEALEVFSNMQEEGVEPSE-FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
+G+ +E + +S +Q GV+ ++ F + ACA L L G
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG----------------- 64
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN 346
+I D Y KCG + + + F+ R WN I+ GL G E E + +FSKL+
Sbjct: 65 --NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 347 LKPDRVSFIGVLTACKHL 364
+P+ + + V+ AC+ L
Sbjct: 123 FEPNTSTLVLVIHACRSL 140
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 224/465 (48%), Gaps = 40/465 (8%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
Q+H IKTG + ++ +T SS D A+ VF + +L +WNT+I +++
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTM-YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + A+S++ M V+P + T+ S+ L + ++K GL I
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEI 423
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
SN +I Y+ K G+I+++ LF +
Sbjct: 424 SNALISAYS-------------------------------KNGQIEKADLLFERSLRKNL 452
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVE--PSEFTMVSLLNACAHLGSLQHGEWVH 273
++WN++ISG+ NG E LE FS + E V P +T+ +LL+ C SL G H
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
+Y+ R+ ++ A+I+MY +CG+I+N++EVF + + + WNS+I + +G
Sbjct: 513 AYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGE 572
Query: 334 EAVEFFSKLQS-SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
AV + +Q + PD +F VL+AC H G ++E F+ MV + + ++ H++C
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC 632
Query: 393 MVEVLGQXXXXXXXXXXIK--GMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP 450
+V++LG+ +K TI W +L S+C HG++++ K A+ + + +
Sbjct: 633 LVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
Query: 451 GDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIEL 495
D YV +SN+ A + ++EA E R + K+ GCS + L
Sbjct: 693 DDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 38/384 (9%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDM-LCSEVQPQKLTYPSVFKAYAQLGAGHDGA 138
S L + N + G +RS + A+ LF D+ C+ ++P + + L G
Sbjct: 18 STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGG 77
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCG 198
Q+H ++ GL +SNT++ +Y G L+ K+ FDE E DV + +++ K G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 199 KIDESRRLFNNMAARTAVT-WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
I+ + +F+ M R V WN+MI+G +G + ++E+F M + GV +F ++L
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN--PRRG 315
+ C + GSL G+ VHS + + F + V+ A+I MY C + +A VFE R
Sbjct: 198 SMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 316 LSCWNSIIIGLAMNGHER-EAVEFFSKLQSSNLKPDRVSFIGVLTACK--------HLGA 366
+N +I GLA G +R E++ F K+ ++L+P ++F+ V+ +C H A
Sbjct: 257 QVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLA 314
Query: 367 IDEAKYYFSLMVNAYEI-------------------EPSIKHYTCMVEVLGQXXXXXXXX 407
I ++L+ NA E + + M+ Q
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 408 XXIKGMTI---NPDASTWGSLLSS 428
K M I PD T+GSLL++
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLAT 398
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 54/363 (14%)
Query: 26 QNHCTTMKDFQQIHAHIIKTGLA--------------HDHIAASRVLTFCASSS-----G 66
Q HC ++ H+H+ T L+ D I V ++ S G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 67 DINYAYMVFTRMPS-PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
DI YA+ VF +MP ++ WN +I G S + ++ LF +M V+ K + ++
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
+ G+ G Q+H V+K G + N +I MY N ++ +A VF+E
Sbjct: 198 -SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEE------- 249
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
++A R VT+N +I G R E+L VF M E
Sbjct: 250 ----------------------TDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEAS 286
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
+ P++ T VS++ +C+ G VH + +E +V A + MY A
Sbjct: 287 LRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
+VFE + L WN++I + A+ + ++ +KPD +F +L L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 366 AID 368
++
Sbjct: 404 VLE 406
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 242/532 (45%), Gaps = 72/532 (13%)
Query: 31 TMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTII 90
T + Q++H+ + K+ LA D A+++ F A + D+ A +F P +++ WN+II
Sbjct: 20 TRLNTQKLHSFVTKSKLARDPYFATQLARFYALND-DLISARKLFDVFPERSVFLWNSII 78
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
R ++++ +SLF +L S+ +P TY + + +++ +HG + GL
Sbjct: 79 RAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLG 138
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
DQ + I+ Y+ +GL+ EA ++F + D+ N MI+G CG D+ LFN M
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 211 AAR---------------------TAVTWN------------------SMISGYVRNGRL 231
R V W+ ++++ Y R +
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 232 KEALEVFSNMQE-------------------------------EGVEPSEFTMVSLLNAC 260
A VF+++ E G +P + +L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWN 320
A L G+ VHSY+ R EL++ V +A+IDMY KCG ++ A+ +F P + + +N
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 321 SIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
S+I+GL ++G A E F+++ L PD ++F +L C H G +++ + F M +
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
+ IEP +HY MV+++G + + D+ G+LLS C H N +A+
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 441 AAQKVCQLDPGDAGGY-VLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCS 491
A+ + + Y V++SNV A +++E R + E++ K PG S
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 230/467 (49%), Gaps = 16/467 (3%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
M D + IHA +K GL + L S G I A F + N SWN+++
Sbjct: 120 MVDGKPIHAQALKNGLC-GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLH 178
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQK--LTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
G+ S A +F + P+K +++ + +YA+ G + L +
Sbjct: 179 GYLESGELDEARRVFDKI------PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL--- 229
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
K N +I Y N + A+ FD + + ++ +MI G K G + + LF
Sbjct: 230 -KSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRL 288
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG--VEPSEFTMVSLLNACAHLGSLQ 267
M+ + + +++MI+ Y +NG+ K+AL++F+ M E ++P E T+ S+++A + LG+
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLA 327
G WV SYI + +++ ++ T++ID+Y K G A ++F ++ ++++I+G
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSI 387
+NG EA F+ + + P+ V+F G+L+A H G + E F+ M + + +EPS
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSA 467
Query: 388 KHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
HY MV++LG+ IK M + P+A WG+LL + H NVE + A +
Sbjct: 468 DHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVK 527
Query: 448 LDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIE 494
L+ G ++ + ++ ++++A R +KE K GCS +E
Sbjct: 528 LETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 179/375 (47%), Gaps = 25/375 (6%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAH-DHIAASRVLTFCASSSGDI-NYAYMVFTRMP 79
L C ++ +Q+HA ++ H + I + L F S +I Y +
Sbjct: 6 LRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFN 65
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+ +SW ++R S+ + + +++DM S + P SV +A ++ DG
Sbjct: 66 GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H + +K GL ++ ++ +Y+ G + AK+ FD+ E + ++ NS++ G + G+
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+DE+RR+F+ + + AV+WN +IS Y + G + A +FS M + P+ + + L+
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK--SPASWNI--LIGG 241
Query: 260 CAHLGSLQHGEWVHSYIRRNNFEL----NVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
+ ++ + R F+ N + +I Y K G +++A E+F ++
Sbjct: 242 YVNCREMK--------LARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKL--QSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
++++I NG ++A++ F+++ ++S ++PD ++ V++A LG
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS----- 348
Query: 374 FSLMVNAYEIEPSIK 388
F V +Y E IK
Sbjct: 349 FGTWVESYITEHGIK 363
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 180/333 (54%), Gaps = 15/333 (4%)
Query: 67 DINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
D+ A F RMP ++ SWN ++ G++++ + A+ LF DML V+P + T+ V
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEK----DQFISNTIIHMYANSGLLSEAKRVFDE-KVE 181
A + L +VKL EK + F+ ++ M+A + A+R+F+E +
Sbjct: 273 A----CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
+++ N+MI G + G + +R+LF+ M R V+WNS+I+GY NG+ A+E F +M
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 242 QEEG-VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
+ G +P E TM+S+L+AC H+ L+ G+ + YIR+N +LN ++I MY + G+
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGN 448
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ A VF+ R + +N++ A NG E + SK++ ++PDRV++ VLTA
Sbjct: 449 LWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 361 CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
C G + E + F + N P HY CM
Sbjct: 509 CNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 182/412 (44%), Gaps = 70/412 (16%)
Query: 22 LTMLQNHCTTMKDFQQIHAH-IIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
L + + T QIHA I+ L ASR+++ C Y ++F +
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN++ N++ + FS+ + L+ + P ++P V K+ AG G
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-----AGRFGILF 123
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE---------------------- 178
V KLG KD ++ N I+ MY + A++VFD+
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 179 ---------KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNG 229
E DV++ MI G AK ++ +R+ F+ M ++ V+WN+M+SGY +NG
Sbjct: 184 EEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG 243
Query: 230 RLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLT 289
++AL +F++M GV P+E T V +++AC+ + I LN V T
Sbjct: 244 FTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT 303
Query: 290 AIIDMYCKCGSIENAIEVF-----ERN---------------------------PRRGLS 317
A++DM+ KC I++A +F +RN P+R +
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKL-QSSNLKPDRVSFIGVLTACKHLGAID 368
WNS+I G A NG A+EFF + + KPD V+ I VL+AC H+ ++
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 42/218 (19%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSV 124
GD++ A +F MP N+ SWN++I G++ + AI F DM+ + +P ++T SV
Sbjct: 345 GDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISN-----TIIHMYANSGLLSEAKRVFDEK 179
A GH G + + K+Q N ++I MYA G L EAKRVFDE
Sbjct: 405 LSA-----CGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFS 239
E DV+ ++N++ + + NG E L + S
Sbjct: 460 KERDVV-------------------------------SYNTLFTAFAANGDGVETLNLLS 488
Query: 240 NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
M++EG+EP T S+L AC G L+ G+ + IR
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 25/291 (8%)
Query: 203 SRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
+R +F+++ NSM + + + L ++ G+ P F+ ++ +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSI 322
G L + + + F + V I+DMY K S+E+A +VF++ +R S WN +
Sbjct: 119 FGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
I G G++ EA + F + + D VS+ ++T + ++ A+ YF M
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP---- 225
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAK 439
E S+ + M+ Q M + P+ +TW ++S+C + + +
Sbjct: 226 -EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
Query: 440 RAAQKV--------CQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN 482
+ + C + + ++Q+A F E QR L+ N
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 226/462 (48%), Gaps = 48/462 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+ IH + IK + + A+ V++ A G + A F R+P + ++N + +G+++
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKC-GRFSPALKAFERLPIKDAVAFNALAQGYTQ 479
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
A ++ +M V P T + + A G+ ++G+++K G + + +
Sbjct: 480 IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHV 539
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
++ +I+M+ L+ A +FD KCG ++
Sbjct: 540 AHALINMFTKCDALAAAIVLFD------------------KCG------------FEKST 569
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+WN M++GY+ +G+ +EA+ F M+ E +P+ T V+++ A A L +L+ G VHS
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
+ + F V +++DMY KCG IE++ + F + + WN+++ A +G A
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
V F +Q + LKPD VSF+ VL+AC+H G ++E K F M ++IE ++HY CMV+
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 396 VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGG 455
+LG+ ++ M + WG+LL+S R H N+ ++ A ++ +L+P +
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH 809
Query: 456 YVLMSNVQAASNKFEEAMEQRILMKENFT--EKEPGCSSIEL 495
Y + ++R+ N + +K P CS IE+
Sbjct: 810 Y---------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 179/416 (43%), Gaps = 74/416 (17%)
Query: 18 DQPCLTMLQNHCTTMKDFQQ---IHAHIIKTGLAHD-HIAASRVLTFCASSSGDINYAYM 73
D+ T C DF++ IH I + GL D +I + V +C + D+ A
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKAR--DLVSARQ 156
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
VF +M ++ +WNT++ G +++ A+ LF DM V ++ ++ A ++L
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 134 GHDGAQLHGRVVKLGL-----------------------------EKDQFISNTIIHMYA 164
LHG V+K G KD+ T++ YA
Sbjct: 217 SDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 165 NSGLLSEAKRVFD---------EKVEL------------------------------DVI 185
++G E +FD KV DV
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
S++ +KCG+++ + +LF N+ R V+W++MI+ Y + G+ EA+ +F +M
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
++P+ T+ S+L CA + + + G+ +H Y + + E + TA+I MY KCG A+
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
+ FER P + +N++ G G +A + + ++ + PD + +G+L C
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLA-HDHIAASRVLTFCASSSGDINYAYMVFTRMPS 80
L ++ C + Q+H +I +GL H+ + + L + + ++F +
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLF------QRQDLSRVIFDSVRD 61
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE---VQPQKLTYPSVFKAYAQLGAGHDG 137
P + WN++IRG++R+ + A+ F M SE + P K ++ KA A G
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYM--SEEKGIDPDKYSFTFALKACAGSMDFKKG 119
Query: 138 AQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKC 197
++H + ++GLE D +I ++ MY + L A
Sbjct: 120 LRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA------------------------- 154
Query: 198 GKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
R++F+ M + VTWN+M+SG +NG AL +F +M+ V+ ++ +L+
Sbjct: 155 ------RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
A + L +H + + F + +IDMYC C + A VFE R+ S
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRV 352
W +++ A NG E +E F +++ +++ ++V
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE-GV 246
N +I + + D SR +F+++ V WNSMI GY R G +EAL F M EE G+
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIE 306
+P +++ L ACA + G +H I E +V + TA+++MYCK + +A +
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
VF++ + + WN+++ GLA NG A+ F ++S + D VS ++ A L
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 367 IDEAKYYFSLMV 378
D + L++
Sbjct: 217 SDVCRCLHGLVI 228
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 233/484 (48%), Gaps = 33/484 (6%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
++L + T ++ +QIH + I +G++ ++ + G +YA VF M
Sbjct: 139 FSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ SWN +I S S + A+ F M E+QP + T V + L G Q
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
+K+G F+SN+I+ L +F +KC ++D
Sbjct: 259 ALCIKMG-----FLSNSIV--------LGAGIDMF------------------SKCNRLD 287
Query: 202 ESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
+S +LF + +V NSMI Y + ++AL +F + V P +FT S+L++
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN 347
Query: 262 HLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNS 321
+ L HG VHS + + F+L+ V T++++MY K GS++ A+ VF + + L WN+
Sbjct: 348 AV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNT 406
Query: 322 IIIGLAMNGHEREAVEFFSK-LQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNA 380
+I+GLA N E++ F++ L + +LKPDRV+ +G+L AC + G ++E FS M A
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 381 YEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR 440
+ + P +HY C++E+L + + P + W +L + G+ +A+
Sbjct: 467 HGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAET 526
Query: 441 AAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVH 500
A+ + + +P + Y+++ + + ++E +++ R M E+ + G S I + V
Sbjct: 527 VAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVF 586
Query: 501 EFLA 504
F A
Sbjct: 587 SFEA 590
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 45/302 (14%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
+G +N A +F MP ++ SWNT+I G ++ I +F DM E++P + T+ S+
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SI 141
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEK-DQFISNTIIHMYANSGLLSEAKRVFDEKVELD 183
+ G Q+HG + G+ + + + N+++ MY
Sbjct: 142 LASLVT--CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYR------------------- 180
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQE 243
+ G D + +F M R V+WN +I +G + AL+ F M+E
Sbjct: 181 ------------RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 244 EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIEN 303
++P E+T+ +++ C+ L L G+ + + F N IVL A IDM+ KC +++
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHE-----REAVEFFSKLQSSNLKPDRVSFIGVL 358
++++F R L W+S++ + + +A+ F + +++PD+ +F VL
Sbjct: 289 SVKLF-----RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
Query: 359 TA 360
++
Sbjct: 344 SS 345
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 35/383 (9%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQP-QKLTYPS 123
SG A +F MP N+ SWN ++ G+ + A+ F+ ++ E++ +T
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVW 400
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD 183
+ + + G Q HG + + G + + ++N ++ MY
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG------------------- 441
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAA-RTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
KCG + + F M+ R V+WN++++G R GR ++AL F MQ
Sbjct: 442 ------------KCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ 489
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
E +PS++T+ +LL CA++ +L G+ +H ++ R+ ++++V++ A++DMY KC +
Sbjct: 490 VEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
AIEVF+ R L WNSII G NG +E E F L++ +KPD V+F+G+L AC
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACI 608
Query: 363 HLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTW 422
G ++ YFS M Y I P ++HY CM+E+ + + M +P
Sbjct: 609 REGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQML 668
Query: 423 GSLLSSCRKHGNVEIAKRAAQKV 445
+ +C+++ ++ AA+++
Sbjct: 669 TRINDACQRYRWSKLGAWAAKRL 691
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 199/404 (49%), Gaps = 7/404 (1%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
++ +Q+H ++K G + + + ++ ++ A VF + +P+ SWN I+R
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV-MSDARRVFDEIVNPSDVSWNVIVR 236
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
+ A+ +F ML V+P T SV A ++ A G +H VKL +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
D +S ++ MY L A+RVFD+ D+ + S + G A G E+R LF+ M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 212 ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
R V+WN+M+ GYV EAL+ + M++E T+V +LN C+ + +Q G+
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA-IEVFERNPRRGLSCWNSIIIGLAMNG 330
H +I R+ ++ NVIV A++DMY KCG++++A I + + R WN+++ G+A G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV-NAYEIEPSIKH 389
+A+ FF +Q KP + + +L C ++ A++ K ++ + Y+I+ I+
Sbjct: 477 RSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR- 534
Query: 390 YTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHG 433
MV++ + K D W S++ C ++G
Sbjct: 535 -GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNG 576
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 39/314 (12%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G ++ A +F MP + SWN +I +++ +F M V+ + ++ V
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
K+ + QLH VVK G + + +I+ +Y ++S+A+RVFDE V
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN---- 225
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEG 245
+ V+WN ++ Y+ G EA+ +F M E
Sbjct: 226 ---------------------------PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN 258
Query: 246 VEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
V P T+ S++ AC+ +L+ G+ +H+ + + + +V T++ DMY KC +E+A
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESAR 318
Query: 306 EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDR--VSFIGVLTACKH 363
VF++ + L W S + G AM+G REA E F +L P+R VS+ +L H
Sbjct: 319 RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF------DLMPERNIVSWNAMLGGYVH 372
Query: 364 LGAIDEAKYYFSLM 377
DEA + +LM
Sbjct: 373 AHEWDEALDFLTLM 386
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 164 ANSGLLSEAKRVFDEKVELD----VIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWN 219
++ L+ +A++V V + N I KCG +D++R LF M R +WN
Sbjct: 72 SSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWN 131
Query: 220 SMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
++I+ +NG E +F M +GV +E + +L +C + L+ +H + +
Sbjct: 132 AVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKY 191
Query: 280 NFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFF 339
+ NV + T+I+D+Y KC + +A VF+ WN I+ G EAV F
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMF 251
Query: 340 SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
K+ N++P + V+ AC A++ K ++ V
Sbjct: 252 FKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 214/473 (45%), Gaps = 33/473 (6%)
Query: 47 LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLF 106
+A D + + ++T S G ++ A +F + N ++N ++ GF R+ A+ LF
Sbjct: 347 MAQDAVTFTEMIT-AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLF 405
Query: 107 VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS 166
DML V+ + S A + Q+HG +K G + I ++ M
Sbjct: 406 TDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Query: 167 GLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV 226
+++A+ +FD+ +N+ + A T S+I GY
Sbjct: 466 ERMADAEEMFDQWP---------------------------SNLDSSKATT--SIIGGYA 496
Query: 227 RNGRLKEALEVF-SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
RNG +A+ +F + E+ + E ++ +L C LG + G +H Y + + ++
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 286 IVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSS 345
+ ++I MY KC ++AI++F + WNS+I + + EA+ +S++
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
Query: 346 NLKPDRVSFIGVLTACKHLGA--IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
+KPD ++ V++A ++ + + + F M Y+IEP+ +HYT V VLG
Sbjct: 617 EIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLL 676
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQ 463
I M + P+ S +LL SCR H N +AKR A+ + P Y+L SN+
Sbjct: 677 EEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIY 736
Query: 464 AASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIY 516
+AS + + R M+E K P S I ++H F A HP+ ++IY
Sbjct: 737 SASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIY 789
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 165/334 (49%), Gaps = 5/334 (1%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGD-INYAYMVFTRMPSPNLYSWNTIIRGFSR 95
QIH I+K+G + ++ +++ SG + +F +P ++ SWNT++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 96 SSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
A LF +M E T ++ + G +LHGR +++GL ++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
++N +I Y+ + + + +++ + D + MI G +D + +F N+ +
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
+T+N++++G+ RNG +AL++F++M + GVE ++F++ S ++AC + + E +H
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS--CWNSIIIGLAMNGHE 332
+ + N + TA++DM +C + +A E+F++ P S SII G A NG
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 333 REAVEFFSK-LQSSNLKPDRVSFIGVLTACKHLG 365
+AV F + L L D VS +L C LG
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 15/309 (4%)
Query: 71 AYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDML-CSEVQPQKLTYPSVFKAYA 129
A +VF + SP + S+ +I GFSR + A+ +F M VQP + T+ ++ A
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMY-ANSG-LLSEAKRVFDEKVELDVIAC 187
++ G Q+HG +VK G F+SN+++ +Y +SG + ++FDE + DV +
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASW 252
Query: 188 NSMIMGLAKCGKIDESRRLFNNMA-----ARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
N+++ L K GK ++ LF M + T ++++S + L E+
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIE 302
G+ +L+ + ++ E ++ + + + T +I Y G ++
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ----DAVTFTEMITAYMSFGMVD 368
Query: 303 NAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACK 362
+A+E+F + +N+++ G NGH +A++ F+ + ++ S + AC
Sbjct: 369 SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC- 427
Query: 363 HLGAIDEAK 371
G + E K
Sbjct: 428 --GLVSEKK 434
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 210/479 (43%), Gaps = 42/479 (8%)
Query: 22 LTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L L T MK Q+H ++K GL ++ ++ F G I A VF +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC-GLIVEARRVFEAVLDR 206
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE--VQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+L WN ++ + + A L M + + T+ S+ A G Q
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQ 262
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H + K+ + D ++ +++MYA S LS+A
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDA--------------------------- 295
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
R F +M R V+WN+MI G+ +NG +EA+ +F M E ++P E T S+L++
Sbjct: 296 ----RECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCW 319
CA ++ + V + + + + V ++I Y + G++ A+ F L W
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSW 411
Query: 320 NSIIIGLAMNGHEREAVEFF-SKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
S+I LA +G E+++ F S LQ L+PD+++F+ VL+AC H G + E F M
Sbjct: 412 TSVIGALASHGFAEESLQMFESMLQ--KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMT 469
Query: 379 NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
Y+IE +HYTC++++LG+ + M P + C H E
Sbjct: 470 EFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESM 529
Query: 439 KRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKEN-FTEKEPGCSSIELY 496
K A+K+ +++P Y ++SN + + +A R + N + K PGCS + Y
Sbjct: 530 KWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWLGDY 588
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 197/456 (43%), Gaps = 75/456 (16%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
+ D +Q H ++K G+ + +++L + + + A +F MP N+ +WN +I
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQ-AYTKIREFDDADKLFDEMPLRNIVTWNILIH 110
Query: 92 GF-----SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
G + +L ++V +++ + + G QLH +VK
Sbjct: 111 GVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK 170
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
GLE F S +++H Y GL+ EA+RVF+ ++ D++ N
Sbjct: 171 QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWN------------------ 212
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM--QEEGVEPSEFTMVSLLNACAHLG 264
+++S YV NG + EA + M + FT SLL+AC
Sbjct: 213 -------------ALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC---- 255
Query: 265 SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIII 324
++ G+ +H+ + + +++ ++ V TA+++MY K + +A E FE R + WN++I+
Sbjct: 256 RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 325 GLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSL-------- 376
G A NG REA+ F ++ NL+PD ++F VL++C AI E K ++
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 377 -------MVNAYE---------------IEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM- 413
++++Y EP + +T ++ L + M
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML 435
Query: 414 -TINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQL 448
+ PD T+ +LS+C G V+ R +++ +
Sbjct: 436 QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 39/302 (12%)
Query: 14 KFISDQPCLTMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
+F D + L + C ++ +QIHA + K D A+ +L A S+ ++ A
Sbjct: 240 RFRGDYFTFSSLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN-HLSDARE 297
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
F M N+ SWN +I GF+++ + A+ LF ML +QP +LT+ SV + A+ A
Sbjct: 298 CFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSA 357
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
+ Q+ V K G ++N++I Y+ +G LSEA F E D+++ S+I
Sbjct: 358 IWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGA 417
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
LA G +ES ++F +M + ++P + T
Sbjct: 418 LASHGFAEESLQMFESMLQK--------------------------------LQPDKITF 445
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNF---ELNVIVLTAIIDMYCKCGSIENAIEVFER 310
+ +L+AC+H G +Q G + + R F E T +ID+ + G I+ A +V
Sbjct: 446 LEVLSACSHGGLVQEG--LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNS 503
Query: 311 NP 312
P
Sbjct: 504 MP 505
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 131/363 (36%), Gaps = 67/363 (18%)
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI 185
K A L D Q HG +VK G+ F+ N ++ Y +A ++FDE
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDE------- 96
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVR-----NGRLKEALEVFSN 240
M R VTWN +I G ++ N R S
Sbjct: 97 ------------------------MPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSR 132
Query: 241 MQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGS 300
+ V + + L+ C +++ G +H + + E + T+++ Y KCG
Sbjct: 133 ILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGL 192
Query: 301 IENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS--SNLKPDRVSFIGVL 358
I A VFE R L WN+++ +NG EA + S + + D +F +L
Sbjct: 193 IVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 359 TAC-----KHLGAI-DEAKYYFSL-----MVNAYE---------------IEPSIKHYTC 392
+AC K + AI + Y F + ++N Y + ++ +
Sbjct: 253 SACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNA 312
Query: 393 MVEVLGQXXXXXXXXXXIKGM---TINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD 449
M+ Q M + PD T+ S+LSSC K + K+ V +
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 450 PGD 452
D
Sbjct: 373 SAD 375
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 215/463 (46%), Gaps = 48/463 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+HA +IK G I+ + ++ S G + + VF + +L SWN ++ GF R
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDM-YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ + A+ +F M V+ + T SV K A L G Q+H VV G +D +
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVV 220
Query: 156 SNT-IIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
T +I Y++ GL I+E+ +++N++ T
Sbjct: 221 LGTAMISFYSSVGL-------------------------------INEAMKVYNSLNVHT 249
Query: 215 -AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V NS+ISG +RN KEA + S + P+ + S L C+ L G+ +H
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER 333
RN F + + ++DMY KCG I A +F P + + W S+I A+NG
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 334 EAVEFFSKL--QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
+A+E F ++ + S + P+ V+F+ V++AC H G + E K F +M Y + P +HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 392 CMVEVLGQXXXXXXXXXXIKGMTINPDAS----TWGSLLSSCRKHGNVEIAKRAAQKVC- 446
C +++L + ++ M N + S W ++LS+C + ++ + A+++
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 447 QLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPG 489
+ P +A YVL+SN AA K++ E R +K K G
Sbjct: 485 ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 34/289 (11%)
Query: 69 NYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAY 128
+A +F +P +L S N+ + RS P ++LF+ + + T+ V A
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
+ L G Q+H ++K G E +I MY+ G L ++ RVF+ E D+++ N
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 189 SMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
++ +SG++RNG+ KEAL VF+ M E VE
Sbjct: 155 AL-------------------------------LSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
SEFT+ S++ CA L LQ G+ VH+ + +L V++ TA+I Y G I A++V+
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVY 242
Query: 309 ER-NPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIG 356
N NS+I G N + +EA S+ Q N++ S G
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNVRVLSSSLAG 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 2/229 (0%)
Query: 206 LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS 265
LF+ + R + NS +S ++R+G + L +F + + S T +L AC+ L
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIG 325
+ G VH+ + + E I TA+IDMY K G + +++ VFE + L WN+++ G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEP 385
NG +EA+ F+ + ++ + V+ C L + + K +++V
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV--VTGRD 217
Query: 386 SIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
+ T M+ + ++ D SL+S C ++ N
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 174/348 (50%), Gaps = 36/348 (10%)
Query: 17 SDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
+++ L N C+ +F+ Q+H +++K G+ + + +S L + + G++ A
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESS--LVYFYAQCGELTSALR 239
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
F M ++ SW +I SR AI +F+ ML P + T S+ KA ++ A
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG 193
G Q+H VVK ++ D F+ +++ MYA G +S+ ++VFD
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD---------------- 343
Query: 194 LAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
M+ R VTW S+I+ + R G +EA+ +F M+ + + T+
Sbjct: 344 ---------------GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTV 388
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
VS+L AC +G+L G+ +H+ I +N+ E NV + + ++ +YCKCG +A V ++ P
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 314 RGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
R + W ++I G + GHE EA++F ++ ++P+ ++ L AC
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 166/335 (49%), Gaps = 33/335 (9%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H+ ++K + D + ++ A G+I+ VF M + N +W +II +R
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKC-GEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
+ AISLF M + LT S+ +A +GA G +LH +++K +EK+ +I
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYI 422
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+T++ +Y KCG+ ++ + + +R
Sbjct: 423 GSTLVWLYC-------------------------------KCGESRDAFNVLQQLPSRDV 451
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
V+W +MISG G EAL+ M +EGVEP+ FT S L ACA+ SL G +HS
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI 511
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREA 335
++N+ NV V +A+I MY KCG + A VF+ P + L W ++I+G A NG REA
Sbjct: 512 AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
++ ++++ + D F +L+ C + +DEA
Sbjct: 572 LKLMYRMEAEGFEVDDYIFATILSTCGDI-ELDEA 605
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 184/404 (45%), Gaps = 36/404 (8%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIR 91
M+ ++IHA +K + +++ C GD+ YA VF MP N +W +I
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRL-GDLVYARKVFDSMPEKNTVTWTAMID 156
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQ-PQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
G+ + A +LF D + ++ + + + ++ G Q+HG +VK+G
Sbjct: 157 GYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-- 214
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
+ N I+ +S++ A+CG++ + R F+ M
Sbjct: 215 ----VGNLIVE--------------------------SSLVYFYAQCGELTSALRAFDMM 244
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
+ ++W ++IS R G +A+ +F M P+EFT+ S+L AC+ +L+ G
Sbjct: 245 EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR 304
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNG 330
VHS + + + +V V T+++DMY KCG I + +VF+ R W SII A G
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
EA+ F ++ +L + ++ + +L AC +GA+ K + ++ IE ++
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIG 423
Query: 391 TCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN 434
+ +V + + ++ + + D +W +++S C G+
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGH 466
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 24/437 (5%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV- 124
G ++ A +F RM + SWN II ++ A L M S V+ +T+ ++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 125 ---FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAK--RVFDEK 179
+A +GA + + V++G S +I+ + K +VF
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIG-------SVAMINGLKACSHIGALKWGKVFHCL 345
Query: 180 V--------ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRL 231
V ++D + NS+I ++C + + +F + A + TWNS+ISG+ N R
Sbjct: 346 VIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI-RRNNFELNVIVLTA 290
+E + M G P+ T+ S+L A +G+LQHG+ H YI RR +++ +I+ +
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 291 IIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
++DMY K G I A VF+ +R + S+I G G A+ +F + S +KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
V+ + VL+AC H + E + F+ M + + I ++HY+CMV++ +
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 411 KGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK-VCQLDPGDAGGYVLMSNVQAASNKF 469
+ P ++ +LL +C HGN I + AA K + + P G Y+L++++ A + +
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 470 EEAMEQRILMKENFTEK 486
+ + + L+ + +K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 192/423 (45%), Gaps = 11/423 (2%)
Query: 25 LQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + C +F QQ+HAH I +GL D + +++TF S+ ++ A +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF-YSAFNLLDEAQTITENSEIL 147
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ WN +I + R+ Q ++S++ M+ ++ + TYPSV KA A L G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G + + ++ N +I MY G + A+R+FD E D ++ N++I K+
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 202 ESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
E+ +L + M + VTWN++ G + G AL M+ V M++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 258 NACAHLGSLQHGEWVHSY-IRRNNFELNVI-VLTAIIDMYCKCGSIENAIEVFERNPRRG 315
AC+H+G+L+ G+ H IR +F ++ V ++I MY +C + +A VF++
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
LS WNSII G A N E ++ S P+ ++ +L +G + K +
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
++ + + + +V++ + M D T+ SL+ + G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKG 506
Query: 436 EIA 438
E+A
Sbjct: 507 EVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 24/437 (5%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV- 124
G ++ A +F RM + SWN II ++ A L M S V+ +T+ ++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 125 ---FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAK--RVFDEK 179
+A +GA + + V++G S +I+ + K +VF
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIG-------SVAMINGLKACSHIGALKWGKVFHCL 345
Query: 180 V--------ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRL 231
V ++D + NS+I ++C + + +F + A + TWNS+ISG+ N R
Sbjct: 346 VIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI-RRNNFELNVIVLTA 290
+E + M G P+ T+ S+L A +G+LQHG+ H YI RR +++ +I+ +
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 291 IIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
++DMY K G I A VF+ +R + S+I G G A+ +F + S +KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
V+ + VL+AC H + E + F+ M + + I ++HY+CMV++ +
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 411 KGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQK-VCQLDPGDAGGYVLMSNVQAASNKF 469
+ P ++ +LL +C HGN I + AA K + + P G Y+L++++ A + +
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 470 EEAMEQRILMKENFTEK 486
+ + + L+ + +K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 192/423 (45%), Gaps = 11/423 (2%)
Query: 25 LQNHCTTMKDF---QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP 81
L + C +F QQ+HAH I +GL D + +++TF S+ ++ A +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF-YSAFNLLDEAQTITENSEIL 147
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+ WN +I + R+ Q ++S++ M+ ++ + TYPSV KA A L G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKID 201
G + + ++ N +I MY G + A+R+FD E D ++ N++I K+
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 202 ESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
E+ +L + M + VTWN++ G + G AL M+ V M++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 258 NACAHLGSLQHGEWVHSY-IRRNNFELNVI-VLTAIIDMYCKCGSIENAIEVFERNPRRG 315
AC+H+G+L+ G+ H IR +F ++ V ++I MY +C + +A VF++
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 316 LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
LS WNSII G A N E ++ S P+ ++ +L +G + K +
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 376 LMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNV 435
++ + + + +V++ + M D T+ SL+ + G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKG 506
Query: 436 EIA 438
E+A
Sbjct: 507 EVA 509
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 205/461 (44%), Gaps = 34/461 (7%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H+ ++K+G +I + VL S+ GD++ + F +P ++ SWN+I+ +
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF- 154
+ ++ LF M +P + S ++ G Q+H V+K+G +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+ + +I MY KC I+ S L+ ++
Sbjct: 353 VQSALIDMYG-------------------------------KCNGIENSALLYQSLPCLN 381
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL--GSLQHGEWV 272
NS+++ + G K+ +E+F M +EG E T+ ++L A + SL V
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLV 441
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
H ++ + +V V ++ID Y K G E + +VF+ + C SII G A NG
Sbjct: 442 HCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMG 501
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+ V+ ++ NL PD V+ + VL+ C H G ++E + F + + Y I P K Y C
Sbjct: 502 TDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYAC 561
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGD 452
MV++LG+ + + D W SLL SCR H N I +RAA+ + L+P +
Sbjct: 562 MVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPEN 621
Query: 453 AGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKEPGCSSI 493
Y+ +S FE + + R + +E G SS+
Sbjct: 622 FAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 32/308 (10%)
Query: 65 SGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
SG++ A+ F M ++ ++N +I G SR AI L+ +M+ ++ T+PSV
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV 184
+ +G Q+H RV+ LG + F+ + ++ +YA L+ A ++FDE ++ ++
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
CN ++ + G ES+RLF EV+ M+ E
Sbjct: 179 AVCNLLLRCFCQTG---ESKRLF----------------------------EVYLRMELE 207
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIEN 303
GV + T ++ C+H + G+ +HS + ++ + + N+ V ++D Y CG +
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
Query: 304 AIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
++ F P + + WNSI+ A G ++++ FSK+Q +P F+ L C
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 364 LGAIDEAK 371
I K
Sbjct: 328 NSDIQSGK 335
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 146/326 (44%), Gaps = 34/326 (10%)
Query: 37 QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRS 96
Q+H +I G + S ++ A ++ A +F M NL N ++R F ++
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRL-VDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 97 STPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE-KDQFI 155
+ +++ M V LTY + + + ++G QLH VVK G + F+
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA 215
+N ++ Y+ CG + S R FN + +
Sbjct: 252 ANVLVDYYS-------------------------------ACGDLSGSMRSFNAVPEKDV 280
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
++WNS++S G + ++L++FS MQ G PS +S LN C+ +Q G+ +H Y
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 276 IRRNNFELNVI-VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE 334
+ + F+++ + V +A+IDMY KC IEN+ +++ P L C NS++ L G ++
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTA 360
+E F + D V+ VL A
Sbjct: 401 IIEMFGLMIDEGTGIDEVTLSTVLKA 426
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 188 NSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
N I L K G + + F+ M+ R VT+N +ISG R G A+E+++ M G+
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
S T S+L+ C+ + G VH + F N+ V +A++ +Y ++ A+++
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKL 169
Query: 308 FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
F+ R L+ N ++ G + E + +++ + + +++ ++ C H +
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 368 DEAKYYFSLMV-------NAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINP--D 418
E K SL+V N + + +Y+ ++ G ++ P D
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS----------MRSFNAVPEKD 279
Query: 419 ASTWGSLLSSCRKHGNV 435
+W S++S C +G+V
Sbjct: 280 VISWNSIVSVCADYGSV 296
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 136/342 (39%), Gaps = 44/342 (12%)
Query: 17 SDQPCLTMLQNHCTTMKDFQ---QIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYM 73
S +P ++ L N C+ D Q QIH +++K G + L I + +
Sbjct: 314 SIRPFMSFL-NFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQL-- 131
++ +P NL N+++ + I +F M+ ++T +V KA +
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLP 432
Query: 132 GAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMI 191
+ H +H +K G D +S ++I Y SG
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSG------------------------ 468
Query: 192 MGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
+ + SR++F+ + S+I+GY RNG + +++ M + P E
Sbjct: 469 -------QNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEV 521
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIR-RNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T++S+L+ C+H G ++ GE + + + + ++D+ + G +E A E
Sbjct: 522 TILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA-ERLLL 580
Query: 311 NPRRGLSC--WNSIIIGLAMNGHE---REAVEFFSKLQSSNL 347
R C W+S++ ++ +E R A E L+ N
Sbjct: 581 QARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENF 622
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 35/370 (9%)
Query: 32 MKDFQQIHAHIIKTG--LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTI 89
+K +++HAH++K+ + + + + +C GD+ VF N SW +
Sbjct: 332 LKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYC--KCGDMASGRRVFYGSKQRNAISWTAL 389
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
+ G++ + A+ V M +P +T +V A+L R +K G
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAEL-----------RAIKQGK 438
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNN 209
E IH YA K +F V L S+++ +KCG + RLF+
Sbjct: 439 E---------IHCYA-------LKNLFLPNVSL----VTSLMVMYSKCGVPEYPIRLFDR 478
Query: 210 MAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHG 269
+ R W +MI YV N L+ +EVF M P TM +L C+ L +L+ G
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 270 EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMN 329
+ +H +I + FE V II MY KCG + +A F+ +G W +II N
Sbjct: 539 KELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCN 598
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
R+A+ F ++ S P+ +F VL+ C G +DEA +F+LM+ Y ++PS +H
Sbjct: 599 ELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 390 YTCMVEVLGQ 399
Y+ ++E+L +
Sbjct: 659 YSLVIELLNR 668
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 36/340 (10%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSR 95
+Q+H HI GL + ++ L ++ G + A VF S N+YSWN ++RG
Sbjct: 131 KQVHVHIRINGLESNEFLRTK-LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 96 SSTPQF--AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
S ++ +S F +M V + +VFK++A A G + H +K GL
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 154 FISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR 213
F+ +++ MY G + A+RVFDE VE D++ +MI GLA
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA------------------ 291
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
N R EAL +F M EE + P+ + ++L + +L+ G+ V
Sbjct: 292 -------------HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 273 HSYI-RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGH 331
H+++ + N+ V + +ID+YCKCG + + VF + +R W +++ G A NG
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
+A+ +Q +PD V+ VL C L AI + K
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S N Y + I+ F+R + + A+++ + + T+ ++ +A + + G Q
Sbjct: 73 SKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQ 132
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
+H + GLE ++F+ ++HMY G + +A++VFDE +V
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV--------------- 177
Query: 200 IDESRRLFNNMAARTAVTWNSMISGYVRNG--RLKEALEVFSNMQEEGVEPSEFTMVSLL 257
+WN+++ G V +G R ++ L F+ M+E GV+ + +++ ++
Sbjct: 178 ----------------YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
+ A +L+ G H+ +N +V + T+++DMY KCG + A VF+ R +
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 318 CWNSIIIGLAMNGHEREAVEFFSKLQS-SNLKPDRVSFIGVLTACKHLGAIDEAK 371
W ++I GLA N + EA+ F + S + P+ V +L + A+ K
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 159/333 (47%), Gaps = 14/333 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG-A 138
S ++YS+ ++I F+ S + A+++F M +P +TY + + ++G +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGL 194
L ++ G+ D + NT+I L EA +VF+E D + N+++
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 195 AKCGKIDESRRLFNNMA----ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
K + E+ ++ N M + + VT+NS+IS Y R+G L EA+E+ + M E+G +P
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
FT +LL+ G ++ + +R + N+ A I MY G +++F+
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 311 NPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
GLS WN+++ NG + E F +++ + P+R +F +++A G+
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
++A + M++A + P + Y ++ L +
Sbjct: 505 FEQAMTVYRRMLDA-GVTPDLSTYNTVLAALAR 536
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 176/420 (41%), Gaps = 51/420 (12%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P+++++ T++ GF R+ + A+S+F +M + +P T+ + K Y G + ++
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI----ACNSMIMGLAK 196
+ GL D NT++ ++ +G+ SE VF E + N++I ++
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 197 CGKIDES----RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
CG +++ RR+ + T+N++++ R G +++ +V + M++ +P+E T
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 253 MVSLLNA-----------------------------------CAHLGSLQHGEWVHSYIR 277
SLL+A C+ L E S ++
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG----LSCWNSIIIGLAMNGHER 333
F ++ L +++ +Y + + A V + RG ++ +NS++ + +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCM 393
++ E ++ + +KPD +S+ V+ A + +A FS M N+ I P + Y
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTF 740
Query: 394 VEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP 450
+ ++ M P+ +T+ S++ K + AK + + LDP
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 157/364 (43%), Gaps = 21/364 (5%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNLYSWN 87
MK F +I+ GL+ D + + +L + D + VF M P ++N
Sbjct: 439 MKIFDEINV----CGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFN 493
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
T+I +SR + + A++++ ML + V P TY +V A A+ G ++ +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 148 GLEKDQFISNTIIHMYANS---GLL-SEAKRVFDEKVELDVIACNSMIMGLAKCGKIDES 203
+ ++ +++H YAN GL+ S A+ V+ +E + ++++ +KC + E+
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 204 RRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
R F+ + R T NSM+S Y R + +A V M+E G PS T SL+
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS-- 317
+ E + I + ++I +I YC+ + +A +F G+
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 318 --CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+N+ I A + EA+ + +P++ ++ ++ L DEAK +
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 376 LMVN 379
+ N
Sbjct: 794 DLRN 797
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 136/335 (40%), Gaps = 33/335 (9%)
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE 181
P++ K ++ G G Q+ +++ + Q S +LSE F +K E
Sbjct: 84 PNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDS-----------VLSELFEPFKDKPE 132
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYV---------RNGRLK 232
+ + GL K D + R F+ + + SM+ V + GR+
Sbjct: 133 STSSELLAFLKGLGFHKKFDLALRAFDWFMKQK--DYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
A +F+ +QE+G ++ SL++A A+ G + V + + + +I I+
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 293 DMYCKCGSIENAI-EVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
+++ K G+ N I + E+ G++ +N++I +EA + F +++++
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 348 KPDRVSFIGVLTACKHLGAIDEAKYYFSLMV-NAYEIEPSIKHYTCMVEVLGQXXXXXXX 406
D+V++ +L EA + MV N + PSI Y ++ +
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF--SPSIVTYNSLISAYARDGMLDEA 368
Query: 407 XXXIKGMT---INPDASTWGSLLSSCRKHGNVEIA 438
M PD T+ +LLS + G VE A
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 155/328 (47%), Gaps = 16/328 (4%)
Query: 66 GDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
GD + A+ + +M P + +NTII G + A++LF +M ++P +TY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV- 180
S+ G D ++L +++ + D F + +I + G L EA++++DE V
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 181 ---ELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
+ ++ +S+I G ++DE++++F M ++ VT+N++I G+ + R++E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
+EVF M + G+ + T L+ G + + + + N++ ++D
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 294 MYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
CK G +E A+ VFE R + +N +I G+ G + + F L +KP
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 350 DRVSFIGVLTACKHLGAIDEAKYYFSLM 377
D V++ +++ G+ +EA F M
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 183/413 (44%), Gaps = 20/413 (4%)
Query: 38 IHAHIIKTGLAHDHIAASRVLT-FCASS--SGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+ ++K G + + S +L +C S S + +F PN ++NT+I G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ A++L M+ QP +TY V + G L ++ + LE
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
I NTII + +A +F E + +V+ +S+I L G+ ++ RL ++M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 211 AART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
R T++++I +V+ G+L EA +++ M + ++PS T SL+N L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL----SCWNSI 322
+ + ++ + +V+ +I +CK +E +EVF +RGL +N +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
I GL G A E F ++ S + P+ +++ +L G +++A F + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-K 496
Query: 383 IEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSS-CRK 431
+EP+I Y M+E + G+ + + PD + +++S CRK
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 158/372 (42%), Gaps = 16/372 (4%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
N Y+++ +I F R S A+++ M+ +P +T S+ Y + L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLAKC 197
++ G + + NT+IH SEA + D V + D++ ++ GL K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 198 GKIDESRRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
G D + L N M + +N++I G + + +AL +F M+ +G+ P+ T
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
SL++ + G + S + +V +A+ID + K G + A ++++ +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 314 RGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
R + ++S+I G M+ EA + F + S + PD V++ ++ ++E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLL 426
F M + ++ Y +++ L Q K M + P+ T+ +LL
Sbjct: 415 GMEVFREMSQRGLVGNTVT-YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 427 SSCRKHGNVEIA 438
K+G +E A
Sbjct: 474 DGLCKNGKLEKA 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 149/350 (42%), Gaps = 16/350 (4%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A++LF +M+ S P + + + A A++ L ++ LG+ + + + +I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ L A V + ++L +++ +S++ G +I E+ L + M
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
VT+N++I G + + EA+ + M +G +P T ++N G +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + + E V++ IID CK +++A+ +F+ +G+ ++S+I L
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G +A S + + PD +F ++ A G + EA+ + MV I+PSI
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVT 363
Query: 390 YTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGSLLSSCRKHGNVE 436
Y+ ++ + M PD T+ +L+ K+ VE
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 134/313 (42%), Gaps = 49/313 (15%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
Y MV R P++ +++++I GF A +F M+ P +TY ++ K +
Sbjct: 349 YDEMV-KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE----LDVI 185
+ +G ++ + + GL + N +I +G A+ +F E V +++
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNM 241
N+++ GL K GK++++ +F + T T+N MI G + G++++ ++F N+
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+GV+P +V+ +I +C+ GS
Sbjct: 528 SLKGVKP-----------------------------------DVVAYNTMISGFCRKGSK 552
Query: 302 ENAIEVFERNPRRGL----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGV 357
E A +F+ G C+N++I +G + E +++S D S IG+
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-ASTIGL 611
Query: 358 LTACKHLGAIDEA 370
+T H G +D++
Sbjct: 612 VTNMLHDGRLDKS 624
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPS----PNLYSWNTII 90
++++ ++K + + S ++ FC ++ A +F M S P++ ++NT+I
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDR--LDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
+GF + + + +F +M + +TY + + Q G ++ +V G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKIDESRRL 206
+ NT++ +G L +A VF+ K+E + N MI G+ K GK+++ L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 207 FNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
F N++ + V +N+MISG+ R G +EA +F M+E+G P+ +L+ A
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 22/414 (5%)
Query: 38 IHAHIIKTGLAHDHIAASRVLT-FCASS--SGDINYAYMVFTRMPSPNLYSWNTIIRGFS 94
+ ++K G D + S +L +C S + +F PN ++NT+I G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ A++L M+ QP TY +V + G L ++ K +E D
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
I TII N +++A +F E + +V+ NS+I L G+ ++ RL ++M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 211 AAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA-CAHLGS 265
R VT++++I +V+ G+L EA +++ M + ++P FT SL+N C H
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 266 LQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL----SCWNS 321
+ I ++ F NV+ +I +CK +E +E+F +RGL +N+
Sbjct: 377 DEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 322 IIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAY 381
+I GL G A + F K+ S + PD +++ +L G +++A F + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS- 494
Query: 382 EIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSS-CRK 431
++EP I Y M+E + G+ + + P+ + +++S CRK
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 149/310 (48%), Gaps = 16/310 (5%)
Query: 67 DINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
++N A +FT M + PN+ ++N++IR A L DM+ ++ P +T+
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
++ A+ + G + +L+ ++K ++ D F +++I+ + L EAK +F+ +
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 183 D----VIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEA 234
D V+ N++I G K +++E LF M+ R VT+N++I G + G A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
++F M +GV P T LL+ G L+ V Y++++ E ++ +I+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 295 YCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
CK G +E+ ++F +G+ + ++I G G + EA F +++ P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 351 RVSFIGVLTA 360
++ ++ A
Sbjct: 570 SGTYNTLIRA 579
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 66 GDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
GDI+ A + +M ++ + TII A++LF +M ++P +TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE--- 178
S+ + G D ++L +++ + + + +I + G L EA++++DE
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 179 -KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
++ D+ +S+I G ++DE++ +F M ++ VT+N++I G+ + R++E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
+E+F M + G+ + T +L+ G + + + + ++I + ++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 294 MYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
CK G +E A+ VFE + + +N +I G+ G + + F L +KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 350 DRVSFIGVLTACKHLGAIDEAKYYFSLM 377
+ + + +++ G +EA F M
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 155/374 (41%), Gaps = 16/374 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S +LYS+N +I F R S A+++ M+ +P +T S+ Y +
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLA 195
L ++ + + + NT+IH SEA + D V + D+ +++ GL
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 196 KCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G ID + L M V + ++I + +AL +F+ M +G+ P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL+ + G + S + NV+ +A+ID + K G + A ++++
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+R + ++S+I G M+ EA F + S + P+ V++ ++ +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
+E F M + ++ Y +++ L Q K M + PD T+
Sbjct: 412 EEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 425 LLSSCRKHGNVEIA 438
LL K+G +E A
Sbjct: 471 LLDGLCKYGKLEKA 484
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 15/272 (5%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPS----PNLYSWNTII 90
++++ +IK + D S ++ FC ++ A +F M S PN+ ++NT+I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDR--LDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
+GF ++ + + LF +M + +TY ++ + Q G ++ ++V G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKIDESRRL 206
D + ++ G L +A VF+ K+E D+ N MI G+ K GK+++ L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 207 FNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAH 262
F +++ + + + +MISG+ R G +EA +F M+E+G P+ T +L+ A
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 263 LGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
G + +R F + ++ +I+M
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 19/321 (5%)
Query: 169 LSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDE----SRRLFNNMAARTAVTWNS 220
L +A +F E V+ ++ N ++ +AK K D R+ N + ++N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
+I+ + R +L AL V M + G EP T+ SLLN H + + +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG----LSCWNSIIIGLAMNGHEREAV 336
++ N + +I A+ + +R RG L + +++ GL G A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
K++ ++ D V + ++ A + +++A F+ M N I P++ Y ++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 299
Query: 397 LGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ--LDPG 451
L + M INP+ T+ +L+ + K G + A++ ++ + +DP
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP- 358
Query: 452 DAGGYVLMSNVQAASNKFEEA 472
D Y + N ++ +EA
Sbjct: 359 DIFTYSSLINGFCMHDRLDEA 379
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 199/468 (42%), Gaps = 54/468 (11%)
Query: 57 VLTFCASSSGDINYAYMVFTRM----PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCS 112
VL S +I++A VF M SPN++++N +IRGF + A++LF M
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 113 EVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEA 172
P +TY ++ Y +L DG +L + GLE + N +I+ G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 173 KRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISG 224
V E LD + N++I G K G ++ + M + +T+ S+I
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 225 YVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELN 284
+ G + A+E M+ G+ P+E T +L++ + G + V + N F +
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 285 VIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFS 340
V+ A+I+ +C G +E+AI V E +GLS +++++ G + EA+
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEA---------------KYYFSLMVNAY---- 381
++ +KPD +++ ++ EA ++ ++ ++NAY
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 382 EIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRA 441
++E +++ + MVE KG+ PD T+ L++ K AKR
Sbjct: 535 DLEKALQLHNEMVE---------------KGVL--PDVVTYSVLINGLNKQSRTREAKRL 577
Query: 442 AQKVCQLD--PGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKE 487
K+ + P D + L+ N K ++ + MK TE +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
SP++ S++T++ GF RS A+ + +M+ ++P +TY S+ + + + +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLA 195
L+ ++++GL D+F +I+ Y G L +A ++ +E VE DV+ + +I GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 196 KCGKIDESRR----LFNNMAARTAVTWN---------------SMISGYVRNGRLKEALE 236
K + E++R LF + + VT++ S+I G+ G + EA +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 237 VFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYC 296
VF +M + +P +++ G ++ ++ + ++ F L+ + + A++
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 297 KCGSI 301
K G +
Sbjct: 687 KEGKV 691
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 198/442 (44%), Gaps = 20/442 (4%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP----NLYSWN 87
+++ +++ ++ GL + + LT + A +VF P N+ S+N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
+I + + A L + M P ++Y +V Y + G +L + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDES 203
GL+ + +I +II + L+EA+ F E + D + ++I G K G I +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 204 RRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+ F M +R +T+ ++ISG+ + G + EA ++F M +G+EP T L+N
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS-- 317
G ++ VH+++ + NV+ T +ID CK G +++A E+ + GL
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 318 --CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+NSI+ GL +G+ EAV+ + +++ L D V++ ++ A G +D+A+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 376 LMVNAYEIEPSIKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
M+ ++P+I + ++ + G + I P+A+T+ SL+
Sbjct: 551 EMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 433 GNVEIAKRAAQKVCQLDPGDAG 454
N++ A + +C G G
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDG 631
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 28/320 (8%)
Query: 46 GLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQ 100
GL D + + ++ +C +G + A+ V M SPN+ ++ T+I G +
Sbjct: 416 GLEPDSVTFTELINGYC--KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 101 FAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTII 160
A L +M +QP TY S+ + G + +L G GL D T++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 161 HMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR--- 213
Y SG + +A+ + E + + ++ N ++ G G +++ +L N M A+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 214 -TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
A T+NS++ Y LK A ++ +M GV P T +L+ +++ ++
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
++ F ++V + +I + K A EVF++ R GL+ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-------------D 700
Query: 333 REAVEFFSKLQSSNLKPDRV 352
+E +FFS + +PD +
Sbjct: 701 KEIFDFFSDTKYKGKRPDTI 720
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAK----------- 196
D + + + + GLL EA+RVF++ + L V +CN + L+K
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 197 -------------------------CGKIDESRRLFNNMAAR----TAVTWNSMISGYVR 227
G+I E+ L M + ++++++++GY R
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 228 NGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV 287
G L + ++ M+ +G++P+ + S++ + L E S + R + +V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 288 LTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQ 343
T +ID +CK G I A + F R ++ + +II G G EA + F ++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 344 SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQX 400
L+PD V+F ++ G + +A + M+ A P++ YT +++ L G
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDL 472
Query: 401 XXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP----GDAGGY 456
+ + + P+ T+ S+++ K GN+E A + V + + D Y
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTY 529
Query: 457 VLMSNVQAASNKFEEAME 474
+ + S + ++A E
Sbjct: 530 TTLMDAYCKSGEMDKAQE 547
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 198/442 (44%), Gaps = 20/442 (4%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP----NLYSWN 87
+++ +++ ++ GL + + LT + A +VF P N+ S+N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
+I + + A L + M P ++Y +V Y + G +L + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDES 203
GL+ + +I +II + L+EA+ F E + D + ++I G K G I +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 204 RRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
+ F M +R +T+ ++ISG+ + G + EA ++F M +G+EP T L+N
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 260 CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS-- 317
G ++ VH+++ + NV+ T +ID CK G +++A E+ + GL
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 318 --CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFS 375
+NSI+ GL +G+ EAV+ + +++ L D V++ ++ A G +D+A+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 376 LMVNAYEIEPSIKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
M+ ++P+I + ++ + G + I P+A+T+ SL+
Sbjct: 551 EMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 433 GNVEIAKRAAQKVCQLDPGDAG 454
N++ A + +C G G
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDG 631
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 28/320 (8%)
Query: 46 GLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQ 100
GL D + + ++ +C +G + A+ V M SPN+ ++ T+I G +
Sbjct: 416 GLEPDSVTFTELINGYC--KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 101 FAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTII 160
A L +M +QP TY S+ + G + +L G GL D T++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 161 HMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR--- 213
Y SG + +A+ + E + + ++ N ++ G G +++ +L N M A+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 214 -TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
A T+NS++ Y LK A ++ +M GV P T +L+ +++ ++
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHE 332
++ F ++V + +I + K A EVF++ R GL+ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-------------D 700
Query: 333 REAVEFFSKLQSSNLKPDRV 352
+E +FFS + +PD +
Sbjct: 701 KEIFDFFSDTKYKGKRPDTI 720
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAK----------- 196
D + + + + GLL EA+RVF++ + L V +CN + L+K
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 197 -------------------------CGKIDESRRLFNNMAAR----TAVTWNSMISGYVR 227
G+I E+ L M + ++++++++GY R
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 228 NGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIV 287
G L + ++ M+ +G++P+ + S++ + L E S + R + +V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 288 LTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQ 343
T +ID +CK G I A + F R ++ + +II G G EA + F ++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 344 SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQX 400
L+PD V+F ++ G + +A + M+ A P++ YT +++ L G
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDL 472
Query: 401 XXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDP----GDAGGY 456
+ + + P+ T+ S+++ K GN+E A + V + + D Y
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTY 529
Query: 457 VLMSNVQAASNKFEEAME 474
+ + S + ++A E
Sbjct: 530 TTLMDAYCKSGEMDKAQE 547
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 180/373 (48%), Gaps = 22/373 (5%)
Query: 20 PCLTMLQNHCTTMKDFQ--QIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFT 76
PC T+++ C K + +I + +G D I + +++ +C +G+IN A V
Sbjct: 139 PCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC--KAGEINNALSVLD 196
Query: 77 RMP-SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQ-LGAG 134
RM SP++ ++NTI+R S + A+ + ML + P +TY + +A + G G
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSM 190
H +L + G D N +++ G L EA + ++ + +VI N +
Sbjct: 257 H-AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 191 IMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGV 246
+ + G+ ++ +L +M + + VT+N +I+ R G L A+++ M + G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 247 EPSEFTMVSLLNA-CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAI 305
+P+ + LL+ C + E++ + R + +++ ++ CK G +E+A+
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAV 434
Query: 306 EVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTAC 361
E+ + +G S +N++I GLA G +A++ ++++ +LKPD +++ ++
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 362 KHLGAIDEAKYYF 374
G +DEA +F
Sbjct: 495 SREGKVDEAIKFF 507
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 164/373 (43%), Gaps = 19/373 (5%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ T+IRGF R + A + + S P +TY + Y + G ++ +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD----VIACNSMIMGLAK 196
R + + D NTI+ +SG L +A V D ++ D VI +I +
Sbjct: 195 LDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
+ + +L + M R VT+N +++G + GRL EA++ ++M G +P+ T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+L + G E + + + R F +V+ +I+ C+ G + AI++ E+ P
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 313 RRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
+ G +N ++ G A+E+ ++ S PD V++ +LTA G ++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSL 425
+A + +++ P + Y +++ L G+ ++ + PD T+ SL
Sbjct: 432 DAVEILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 426 LSSCRKHGNVEIA 438
+ + G V+ A
Sbjct: 491 VGGLSREGKVDEA 503
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 164/366 (44%), Gaps = 19/366 (5%)
Query: 23 TMLQNHCTT--MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP- 79
T+L++ C + +K ++ +++ D I + ++ SG + +A + M
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRD 267
Query: 80 ---SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
+P++ ++N ++ G + AI DM S QP +T+ + ++ G D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIM 192
+L +++ G N +I+ GLL A + ++ + + ++ N ++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 193 GLAKCGKIDESRRLFNNMAARTA----VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
G K K+D + M +R VT+N+M++ ++G++++A+E+ + + +G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
T ++++ A G + +R + + + I ++++ + G ++ AI+ F
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 309 ERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
R G+ +NSI++GL + A++F + + KP+ S+ ++ +
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 365 GAIDEA 370
G EA
Sbjct: 568 GMAKEA 573
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 208 NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
N+ A V N+ + VR G L+E + NM G P +L+ LG +
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-NPRRGLSCWNSIIIGL 326
+ + + +VI +I YCK G I NA+ V +R + + +N+I+ L
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHLGA 366
+G ++A+E ++ + PD +++ ++ A C+ G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
R G++K+A+E+ + + EG + + C +LQ + VH +I + ++
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSN 346
+II+MY CGS+E+A+ VF P R L W +I A NG +A++ FS+ +
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 347 LKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXX 406
KPD F + AC LG ++E +F M Y I P ++HY +V++L +
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 407 XXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD 449
++ M P+ W +L++ R HG++ + R V QLD
Sbjct: 338 LRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
D+ A NS+I + CG ++++ +FN+M R TW +I + +NG+ ++A++ FS +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 243 EEGVEPSEFTMVSLLNACAHLGSLQHG 269
+EG +P + AC LG + G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 167/367 (45%), Gaps = 20/367 (5%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+LYS+N +I R S A+S+ M+ +P +T S+ + Q D L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKC 197
++ ++G D I NTII GL+++A +FD + V D + NS++ GL
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 198 GKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
G+ ++ RL +M R +T+ ++I +V+ G+ EA++++ M V+P FT
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
SL+N G + + + + +V+ +I+ +CK ++ ++F +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 314 RGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
RGL +N+II G G A E FS++ S +P+ ++ +L +++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEK 399
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLL 426
A F M + EIE I Y ++ + + + ++ + PD ++ +++
Sbjct: 400 ALVLFENMQKS-EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 427 SS-CRKH 432
S CRK
Sbjct: 459 SGFCRKR 465
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ +NTII G + A+ LF M V+ +TY S+ G D A+L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
+V + + +I ++ G SEA ++++E V+ DV NS+I GL
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++DE++++ + M + VT+N++I+G+ ++ R+ E ++F M + G+ T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+++ G + + S R + N+ + ++ C +E A+ +FE
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 313 RR----GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ ++ +N +I G+ G+ +A + F L LKPD VS+ +++
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 46/280 (16%)
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
++N +I+ R R AL V M + G EP T+ SL+N + + S +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMNGHE 332
F +V++ IID CK G + +A+E+F+R R G+ +NS++ GL +G
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+A + ++ P+ ++F V+ G EA + M
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR------------ 273
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKR----AAQKVCQL 448
++PD T+ SL++ HG V+ AK+ K C
Sbjct: 274 ---------------------CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 449 DPGD----AGGYVLMSNVQAASNKFEEAMEQRILMKENFT 484
D G+ V + F E M QR L+ + T
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFRE-MAQRGLVGDTIT 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
R P+++++N++I G A + M+ P +TY ++ + + +
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE------------------ 178
G +L + + GL D NTII Y +G A+ +F
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 179 ------------------KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAV 216
++ELD+ N +I G+ K G ++++ LF +++ + V
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
++ +MISG+ R + ++ ++ MQE+G+ P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAI 291
K+A+E+ ++G P V L +CA+L SL+H + VH + ++ F + + +
Sbjct: 222 KDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 292 IDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDR 351
I M+ +C SI +A VF+ + + W+ ++ + NG +A+ F ++ LKP+
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 352 VSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIK 411
+F+ V AC +G I+EA +F M N + I P +HY ++ VLG+ I+
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 412 GMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
+ P A W ++ + R HG++++ + + +DP A
Sbjct: 398 DLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 164 ANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWN 219
AN L +K+V D K D N +I +C I +++R+F++M + +W+
Sbjct: 247 ANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWH 306
Query: 220 SMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
M+ Y NG +AL +F M + G++P+E T +++ ACA +G ++
Sbjct: 307 LMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 153/320 (47%), Gaps = 18/320 (5%)
Query: 67 DINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
++N A +FT M + PN+ ++N++IR A L DM+ ++ P +T+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
++ A+ + G + +L+ ++K ++ D F +++I+ + L EAK +F+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 183 D----VIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEA 234
D V+ N++I G K ++DE LF M+ R VT+ ++I G+ + A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
VF M +GV P T LL+ + G ++ V Y++R+ E ++ +I+
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 295 YCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
CK G +E+ ++F +G+ + +++ G G + EA F +++ PD
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 351 RVSFIGVLTACKHLGAIDEA 370
++ ++ A HL D+A
Sbjct: 571 SGTYNTLIRA--HLRDGDKA 588
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 152/328 (46%), Gaps = 16/328 (4%)
Query: 66 GDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
GDI+ A + +M P + +NTII A++LF +M ++P +TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE--- 178
S+ + G D ++L +++ + + + +I + G L EA++++DE
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 179 -KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
++ D+ +S+I G ++DE++ +F M ++ VT+N++I G+ + R+ E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
+E+F M + G+ + T +L++ + + V + + +++ + ++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 294 MYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
C G +E A+ VFE R + +N +I G+ G + + F L +KP
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 350 DRVSFIGVLTACKHLGAIDEAKYYFSLM 377
+ V++ +++ G +EA F M
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 159/374 (42%), Gaps = 16/374 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S NLY+++ +I F R S A+++ M+ +P +T S+ + D
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLA 195
L G++V++G + D F NT+IH SEA + D V + D++ ++ GL
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 196 KCGKIDESRRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G ID + L M V +N++I + +AL +F+ M +G+ P+
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL+ + G + S + NV+ +A+ID + K G + A ++++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+R + ++S+I G M+ EA F + S + P+ V++ ++ +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
DE F M + ++ YT ++ Q K M + PD T+
Sbjct: 413 DEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 425 LLSSCRKHGNVEIA 438
LL +G VE A
Sbjct: 472 LLDGLCNNGKVETA 485
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 135/305 (44%), Gaps = 13/305 (4%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A++LF DM+ S P + + + A A++ L ++ LG+ + + + +I+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ LS A V + ++L D++ NS++ G +I ++ L M
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+ T+N++I G R+ R EA+ + M +G +P T ++N G + +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + E V++ IID C ++ +A+ +F +G+ +NS+I L
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G +A S + + P+ V+F ++ A G + EA+ + M+ I+P I
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFT 363
Query: 390 YTCMV 394
Y+ ++
Sbjct: 364 YSSLI 368
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 12/253 (4%)
Query: 199 KIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
K+D++ LF +M + V ++ ++S + + + + MQ G+ + +T
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
L+N L V + + + +E +++ L ++++ +C I +A+ + +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 315 GLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
G +N++I GL + EAV ++ +PD V++ V+ G ID A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 371 KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLS 427
M +IEP + Y +++ L M I P+ T+ SL+
Sbjct: 241 LSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 428 SCRKHGNVEIAKR 440
+G A R
Sbjct: 300 CLCNYGRWSDASR 312
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 147/311 (47%), Gaps = 16/311 (5%)
Query: 66 GDINYAYMVFTRMPSPNLYS----WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
G I+ A +F M + + S +N+++RG ++ L DM+ E+ P +T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD---- 177
+ + + G + +L+ ++ G+ + NT++ Y LSEA + D
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 178 EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
K D++ S+I G ++D+ ++F N++ R AVT++ ++ G+ ++G++K
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
A E+F M GV P T LL+ G L+ + ++++ +L +++ T II+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 294 MYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
CK G +E+A +F P +G+ + +I GL G EA K++ P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 350 DRVSFIGVLTA 360
+ ++ ++ A
Sbjct: 542 NDCTYNTLIRA 552
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 190/419 (45%), Gaps = 21/419 (5%)
Query: 46 GLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQF 101
G+AH +I ++ C +AY V ++ P+ ++NT+I+G
Sbjct: 118 GIAH-NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ L M+ + QP +TY S+ + G L ++ + ++ D F +TII
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 162 MYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
G + A +F E ++ V+ NS++ GL K GK ++ L +M +R
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
+T+N ++ +V+ G+L+EA E++ M G+ P+ T +L++ L +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMN 329
+ RN +++ T++I YC +++ ++VF +RGL ++ ++ G +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G + A E F ++ S + PD +++ +L G +++A F + + +++ I
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVM 475
Query: 390 YTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV 445
YT ++E + G+ + + P+ T+ ++S K G++ A +K+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 130/283 (45%), Gaps = 18/283 (6%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGF---SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
Y M+ TR SPN+ ++NT++ G+ +R S + L V CS P +T+ S+ K
Sbjct: 321 YKEMI-TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS---PDIVTFTSLIK 376
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE----L 182
Y + DG ++ + K GL + + ++ + SG + A+ +F E V
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTA----VTWNSMISGYVRNGRLKEALEVF 238
DV+ ++ GL GK++++ +F ++ V + ++I G + G++++A +F
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
++ +GV+P+ T +++ GSL + + + N +I + +
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 299 GSIENAIEVFERNPRRGLSCWNS---IIIGLAMNGHEREAVEF 338
G + + ++ E G S S ++I + ++ +R + +
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 599
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 183/460 (39%), Gaps = 62/460 (13%)
Query: 30 TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTI 89
T MK + I H++KTG + + + +F +S D F+ + + N+ +
Sbjct: 9 TNMKALRLIQPHLLKTGSLRTDLLCT-ISSFFSSCERD-------FSSISNGNV-CFRER 59
Query: 90 IRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGL 149
+R AI+LF +M+ S P + + F A A+ + ++ G+
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 150 EKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDES-- 203
+ + N +I+ + A V + ++L D N++I GL GK+ E+
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 204 --RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACA 261
R+ N VT+NS+++G R+G AL++ M+E V+ FT +++++
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 262 HLGSL------------------------------QHGEW------VHSYIRRNNFELNV 285
G + + G+W + + R NV
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NV 298
Query: 286 IVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSK 341
I ++D++ K G ++ A E+++ RG+S +N+++ G M EA
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 342 LQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXX 401
+ + PD V+F ++ + +D+ F + + ++ Y+ +V+ Q
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSG 417
Query: 402 XXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIA 438
+ M + PD T+G LL +G +E A
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 147/339 (43%), Gaps = 23/339 (6%)
Query: 191 IMGLAKCGKIDESRRLFNNMAARTAVTWNSMI----SGYVRNGRLKEALEVFSNMQEEGV 246
++ AK + + R L NN+ A + ++ + ++G++K+AL +
Sbjct: 191 VLEEAKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNY 250
Query: 247 EPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIE 306
++ L C LQ + VH I + L++ +++MY CG A
Sbjct: 251 VVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 307 VFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
VFE+ + L W II A NG +A++ FS+ + PD F G+ AC LG
Sbjct: 311 VFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGD 370
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLL 426
+DE +F M Y I PSI+ Y +VE+ ++ M + P+ W +L+
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Query: 427 SSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK 486
+ R HGN+E+ A+ V LDP NK ++ E I +K + EK
Sbjct: 431 NLSRVHGNLELGDYCAEVVEFLDP-------------TRLNK--QSREGFIPVKASDVEK 475
Query: 487 EP-GCSSIELYG---EVHEFLAGGRLHPKTQEIYSLLND 521
E S L+G + EF AG P+ E++ LL +
Sbjct: 476 ESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRN 514
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM 241
LD+ + + ++ + CG +E+ +F M+ + TW +I + +NG ++A+++FS
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH--SYIRRNNFELNVIVLTAIIDMYCKCG 299
+EEG P + AC LG + G +H S R ++ ++++MY G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPG 405
Query: 300 SIENAIEVFERNPRR-GLSCWNSIII------GLAMNGHEREAVEFFSKLQSSNLKPDRV 352
++ A+E ER P + W +++ L + + E VEF + + K R
Sbjct: 406 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLN--KQSRE 463
Query: 353 SFIGV 357
FI V
Sbjct: 464 GFIPV 468
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 154/324 (47%), Gaps = 19/324 (5%)
Query: 41 HIIKTGLAHDHIAASRVL-TFCASSSGDINYAYMVFTRMPS----PNLYSWNTIIRGFSR 95
+++ G D +A + ++ + C + +N A+ F + PN+ ++ ++ G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKR--VNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 96 SSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFI 155
SS A L DM+ ++ P +TY ++ A+ + G + +L +V++ ++ D
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 156 SNTIIHMYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAKCGKIDESRRLFNNMA 211
+++I+ + EA ++FD V DV++ N++I G K ++++ +LF M+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 212 AR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQ 267
R VT+N++I G+ + G + +A E FS M G+ P +T LL G L+
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 268 HGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSII 323
+ +++ +L+++ T +I CK G +E A +F +GL + +++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 324 IGLAMNGHEREAVEFFSKLQSSNL 347
GL G E ++K++ L
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGL 501
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 149/344 (43%), Gaps = 47/344 (13%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISL------------------FVDMLCSE--------- 113
P+ + +++ GF R + A+SL +D LC
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 114 --------VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYAN 165
++P +TY ++ D A+L ++K + + + ++ +
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 166 SGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVT 217
+G + EAK +F+E V + D++ +S+I GL +IDE+ ++F+ M ++ V+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
+N++I+G+ + R+++ +++F M + G+ + T +L+ G + + S +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHER 333
++ ++ C G +E A+ +FE +R + + ++I G+ G
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 334 EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
EA F L LKPD V++ +++ G + E + ++ M
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/411 (18%), Positives = 190/411 (46%), Gaps = 18/411 (4%)
Query: 43 IKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFA 102
+ G + ++ +R+ + + D+ ++ MV +R P P++ +N ++ +
Sbjct: 47 VSGGDLRERLSKTRLRDIKLNDAIDL-FSDMVKSR-PFPSIVDFNRLLSAIVKLKKYDVV 104
Query: 103 ISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHM 162
ISL M ++ T+ V + + G+++KLG E D+ ++++
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164
Query: 163 YANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----T 214
+ +S+A + D+ VE+ D++A N++I L K +++++ F + +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 215 AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHS 274
VT+ ++++G + R +A + S+M ++ + P+ T +LL+A G + + +
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 275 YIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG----LSCWNSIIIGLAMNG 330
+ R + + +++ +++I+ C I+ A ++F+ +G + +N++I G
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 331 HEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHY 390
+ ++ F ++ L + V++ ++ G +D+A+ +FS M + + I P I Y
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTY 403
Query: 391 TCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
++ L G+ ++ ++ D T+ +++ K G VE A
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 68 INYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPS 123
I+ A +F M S ++ S+NT+I GF ++ + + LF +M + +TY +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----K 179
+ + + Q G + ++ G+ D + N ++ ++G L +A +F++ +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEAL 235
++LD++ ++I G+ K GK++E+ LF +++ + VT+ +M+SG G L E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 236 EVFSNMQEEGVEPSEFTM 253
+++ M++EG+ ++ T+
Sbjct: 491 ALYTKMKQEGLMKNDCTL 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 23/269 (8%)
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGS----LQHGEWVHSY-IRRNN 280
+R+ +L +A+++FS+M + PS LL+A L + G+ + IR +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHER-----EA 335
+ N++ I+ +C C + A+ + + + G + + IG +NG R +A
Sbjct: 121 YTFNIV-----INCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDA 174
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
V K+ KPD V++ ++ + +++A +F + I P++ YT +V
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVN 233
Query: 396 VLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQL--DP 450
L + M I P+ T+ +LL + K+G V AK +++ ++ DP
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 451 GDAGGYVLMSNVQAASNKFEEAMEQRILM 479
D Y + N ++ +EA + LM
Sbjct: 294 -DIVTYSSLINGLCLHDRIDEANQMFDLM 321
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 153/328 (46%), Gaps = 16/328 (4%)
Query: 66 GDINYAYMVFTRMPSP----NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
GDI+ A+ + +M + N+ ++T+I + A++LF +M V+P +TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE--- 178
S+ D ++L +++ + + N +I + G L EA++++DE
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 179 -KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
++ D+ +S+I G ++DE++ +F M ++ VT+N++I+G+ + R+ E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
+E+F M + G+ + T +L++ + + V + + N++ ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 294 MYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
CK G +E A+ VFE R + +N +I G+ G + + F L +KP
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 350 DRVSFIGVLTACKHLGAIDEAKYYFSLM 377
D + + +++ G +EA F M
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 160/374 (42%), Gaps = 16/374 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S NLY++N +I F R S A++L M+ +P +T S+ Y D
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLA 195
L ++V++G D T+IH SEA + D V+ +++ ++ GL
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 196 KCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G ID + L N M A V ++++I + +AL +F+ M+ +GV P+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL++ + + S + NV+ A+ID + K G + A ++++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+R + ++S+I G M+ EA F + S + P+ V++ ++ I
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
DE F M + ++ YT ++ Q K M ++P+ T+ +
Sbjct: 417 DEGVELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 425 LLSSCRKHGNVEIA 438
LL K+G +E A
Sbjct: 476 LLDGLCKNGKLEKA 489
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 15/230 (6%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPS----PNLYSWNTII 90
++++ +IK + D S ++ FC ++ A +F M S PN+ ++NT+I
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDR--LDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
GF ++ + LF +M + +TY ++ + Q + + ++V G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKIDESRRL 206
+ NT++ +G L +A VF+ K+E + N MI G+ K GK+++ L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 207 FNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
F +++ + + +N+MISG+ R G +EA +F M+E+G P T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
R P++++++++I GF A +F M+ + P +TY ++ + + +
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVF----DEKVELDVIACNSMIM 192
G +L + + GL + T+IH + + A+ VF + V +++ N+++
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 193 GLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
GL K GK++++ +F + T T+N MI G + G++++ ++F ++ +GV+P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
++++ G + + + +R +
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMRED 569
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 148/307 (48%), Gaps = 14/307 (4%)
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
T+ PN+ +++++I A L DM+ ++ P +T+ ++ A+ + G
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI----ACNSMI 191
+ +LH ++K ++ D F N++I+ + L +AK++F+ V D N++I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 192 MGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
G K ++++ LF M+ R VT+ ++I G +G A +VF M +GV
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P T LL+ + G L+ V Y++++ +L++ + T +I+ CK G +++ ++
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 308 FERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
F +G+ +N++I GL +EA K++ PD ++ ++ A H
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA--H 510
Query: 364 LGAIDEA 370
L D+A
Sbjct: 511 LRDGDKA 517
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 168/407 (41%), Gaps = 51/407 (12%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S NLY++N +I F R S A++L M+ +P +T S+ Y D
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE--------------------- 178
L ++V++G D T+IH SEA + D
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 179 ------------------KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAV 216
K+E DV+ N++I L K +D++ LF M + V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
T++S+IS GR +A ++ S+M E+ + P+ T +L++A G E +H +
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHE 332
+ + + ++ ++I+ +C ++ A ++FE ++ L +N++I G +
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+ E F ++ L D V++ ++ H G D A+ F MV+ + P I Y+
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSI 400
Query: 393 MVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE 436
+++ L G+ ++ I D + +++ K G V+
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/419 (19%), Positives = 174/419 (41%), Gaps = 20/419 (4%)
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
MV +R P P+++ +N ++ ++ ISL M + TY + + +
Sbjct: 1 MVKSR-PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACN 188
L G+++KLG E +++++ Y + +S+A + D+ VE+ D I
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 189 SMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
++I GL K E+ L + M R VT+ +++G + G + A + + M+
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
+E +++++ + + + NV+ +++I C G +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 305 IEVF----ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
++ E+ L +N++I G EA + + ++ PD ++ ++
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 361 -CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---IN 416
C H +D+AK F MV+ + P + Y +++ + + M+ +
Sbjct: 300 FCMH-DRLDKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 417 PDASTWGSLLSSCRKHGNVEIAKRA-AQKVCQLDPGDAGGYVLMSNVQAASNKFEEAME 474
D T+ +L+ G+ + A++ Q V P D Y ++ + + K E+A+E
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 46 GLAHDHI-AASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAIS 104
GL+ D I ASR+L+ +V P+PN+ ++ T+I GF + A
Sbjct: 261 GLSVDQIEVASRLLS-------------LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 105 LFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA 164
LF M ++P + Y ++ Y + G G +L + + G++ D + ++ I +Y
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 165 NSGLLSEA----KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAV 216
SG L+ A KR+ + + +V+ +I GL + G+I E+ ++ + R + V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
T++S+I G+ + G L+ ++ +M + G P L++ + G + H +
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL----SCWNSIIIGLAMNGHE 332
+ LNV+V ++ID +C+ + A++VF G+ + + +++ M G
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHL 364
EA+ F ++ L+PD +++ ++ A CKH+
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 212/499 (42%), Gaps = 68/499 (13%)
Query: 47 LAHDHIAASRVLTFCA-----SSSGDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSS 97
L D A V+TFC G+++ A+ +F M P+L +++T+I G+ ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 98 TPQFAISLF------------------VD-----------------MLCSEVQPQKLTYP 122
LF +D MLC + P +TY
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
+ K Q G ++ ++G+++K G+E +++I + G L ++++ +++
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 183 ----DVIACNSMIMGLAKCGKIDESRRLFNNMAART----AVTWNSMISGYVRNGRLKEA 234
DV+ ++ GL+K G + + R M ++ V +NS+I G+ R R EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
L+VF M G++P T +++ G L+ ++ + + E + + +ID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 295 YCKCGSIENAIEVFERNPRRGLS---CWNSIIIGLAMNGHERE-AVEFFSKLQSSNLKPD 350
+CK +++F+ R +S +++I L H E A +FF+ L ++PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
V++ ++ L +DEA+ F L+ P+ T ++ VL +
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELL-KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 411 KGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ--LDPGDAGGYVLMSN---- 461
M P+A T+G L+ K ++E + + +++ + + P +++
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 462 --VQAASNKFEEAMEQRIL 478
V A+N F +A++ ++L
Sbjct: 755 GRVDEATNIFHQAIDAKLL 773
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 17/366 (4%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP----NLY 84
C ++ ++ +IK G D + VL S G + +A +M N+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPD-VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
+N++I G+ R + A+ +F M ++P T+ +V + G + L R+
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKI 200
K+GLE D T+I + + ++FD K+ D+ CN +I L KC +I
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 201 DESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
+++ + FNN+ VT+N+MI GY RL EA +F ++ P+ T+ L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
++ + + S + + N + ++D + K IE + ++FE +G+
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 317 S----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
S ++ II GL G EA F + + L PD V++ ++ +G + EA
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 373 YFSLMV 378
+ M+
Sbjct: 798 LYEHML 803
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 10/243 (4%)
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
L A H G + G+ F+ + + + L + V + + +++CN
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 189 SMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
++ GL+ +I+ + RL + + A VT+ ++I+G+ + G + A ++F M++
Sbjct: 257 KVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
G+EP +L++ G L G + S +L+V+V ++ ID+Y K G + A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 305 IEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
V++R +G+S + +I GL +G EA + ++ ++P V++ ++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 361 -CK 362
CK
Sbjct: 436 FCK 438
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 43/279 (15%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ ++ T++R + A+ LF M ++P L Y ++ A+ + G QL
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAK 196
+ + + D + N +IH+ + +A + F+ K+E D++ N+MI G
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 197 CGKIDESRRLF------------------------NN-----------MAAR----TAVT 217
++DE+ R+F NN MA + AVT
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 218 WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIR 277
+ ++ + ++ ++ + ++F MQE+G+ PS + +++ G + +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 278 RNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
+V+ +I YCK G + A ++E R G+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ ++NT+I G+ A +F + + P +T + + ++
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
+ + G + + ++ ++ S + + ++F+E + +++ + +I GL K
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 197 CGKIDESRRLFNN-MAAR---TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++DE+ +F+ + A+ V + +I GY + GRL EA ++ +M GV+P +
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 253 MVSLLNACAHLGSLQHGEWVHS 274
+L + G WVH
Sbjct: 814 QRALSEYNPPKWLMSKGVWVHD 835
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 30/342 (8%)
Query: 193 GLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
+C ++ ++ NN + T T++++ + +++EALEV ++++G
Sbjct: 59 SFVQCRRVSSYAQMVNNHQSVTIETFDAL----CKQVKIREALEVIDILEDKGYIVDFPR 114
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
++ L C + +L+ VH I L+ +I+MY C S ++A+ VF P
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 313 RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKY 372
+R W ++I LA NG A++ F++ KPD+ F V AC +G I+E
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 373 YFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
+F M Y + S++ Y ++E+L ++ MT+ P W +L++ C
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 433 GNVEIAKRAAQKVCQLDPG-----DAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEKE 487
G +E+ R A+ + +LD G V +A K +E L +
Sbjct: 291 GYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKE------LRYCQMIRDD 344
Query: 488 PGCSSIELYGEVHEFLAGGRLHPKTQEIYSLLN----DPGFA 525
P +HEF AG H T + L D GF
Sbjct: 345 PK-------KRMHEFRAGDTSHLGTVSAFRSLKVQMLDIGFV 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 169 LSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGYVRN 228
L EA+ V D LD + +++I + C D++ +FN M R + TW +MI +N
Sbjct: 128 LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKN 187
Query: 229 GRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW-VHSYIRRNNFELNVIV 287
G + A+++F+ EEG +P + ++ AC +G + G S R L++
Sbjct: 188 GEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMED 247
Query: 288 LTAIIDMYCKCGSIENAIEVFER 310
+I+M CG ++ A++ ER
Sbjct: 248 YVNVIEMLAACGHLDEALDFVER 270
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 148/310 (47%), Gaps = 12/310 (3%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S +LY+ N ++ F +SS P A S M+ +P +T+ S+ + +
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLA 195
+ ++V++G++ D + TII +G ++ A +FD+ + DV+ S++ GL
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 196 KCGKIDESRRLFNNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
G+ ++ L M R +T+N++I +V+ G+ +A E+++ M + P+ F
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL+N G + + + +V+ T++I+ +CKC +++A+++F
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
++GL+ + ++I G G A E FS + S + P+ ++ +L + G +
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 368 DEAKYYFSLM 377
+A F M
Sbjct: 404 KKALMIFEDM 413
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 177/367 (48%), Gaps = 57/367 (15%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVL-TFCASSSGDINYAYMVFTRMPS----PNLYSW 86
M++ + +++ G+ D + + ++ + C +G +NYA +F +M + P++ +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC--KNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
+++ G S + A SL M +++P +T+ ++ A+ + G D +L+ +++
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVF----DEKVELDVIACNSMIMGLAKCGKIDE 202
+ + + F ++I+ + G + EA+++F + DV+A S+I G KC K+D+
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 203 SRRLFNNMAAR----TAVTWNSMISGY------------------------VR------- 227
+ ++F M+ + +T+ ++I G+ +R
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 228 ----NGRLKEALEVFSNMQE---EGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
NG++K+AL +F +MQ+ +GV P+ +T LL+ + G L+ V +R+
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAV 336
++ +I T II CK G ++NA+ +F P +G+ + ++I GL G + EA
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 337 EFFSKLQ 343
F K++
Sbjct: 516 VLFRKMK 522
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 186/441 (42%), Gaps = 38/441 (8%)
Query: 35 FQQIHAHIIKTGLAHDHIAASRVL-------TFC--------ASSSGDINYAYMVFTRM- 78
F Q+H + + G + ++ SR+L FC S N A +FT M
Sbjct: 5 FFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64
Query: 79 ---PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
P P++ + ++ ++ I+L + V T + + Q +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMI 191
+ G+++KLG E D ++I+ + + EA + ++ VE+ DV+ ++I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 192 MGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
L K G ++ + LF+ M V + S+++G +GR ++A + M + ++
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P T +L++A G E +++ + R + N+ T++I+ +C G ++ A ++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 308 FERNPRRG----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
F +G + + S+I G +A++ F ++ L + +++ ++
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 364 LGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT------INP 417
+G + A+ FS MV + + P+I+ Y ++ L + M + P
Sbjct: 365 VGKPNVAQEVFSHMV-SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 418 DASTWGSLLSSCRKHGNVEIA 438
+ T+ LL +G +E A
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKA 444
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 150/307 (48%), Gaps = 14/307 (4%)
Query: 76 TRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGH 135
T+ PN+ +++++I A L DM+ ++ P +T+ ++ A+ + G
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 136 DGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD----VIACNSMI 191
+ +L+ ++K ++ D F N++++ + L +AK++F+ V D V+ N++I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 192 MGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVE 247
G K ++++ LF M+ R VT+ ++I G +G A +VF M +GV
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 248 PSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV 307
P T LL+ + G L+ V Y++++ +L++ + T +I+ CK G +++ ++
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 308 FERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKH 363
F +G+ +N++I GL +EA K++ P+ ++ ++ A H
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA--H 585
Query: 364 LGAIDEA 370
L D+A
Sbjct: 586 LRDGDKA 592
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 66 GDINYAYMVFTRMPSPNLYS----WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
GD + A + +M + + + +NTII + A++LF +M ++P +TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE--- 178
S+ G D +QL +++ + + N +I + G EA++++D+
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 179 -KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKE 233
++ D+ NS++ G ++D+++++F M ++ VT+N++I G+ ++ R+++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 234 ALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIID 293
E+F M G+ T +L+ H G + + V + + +++ + ++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 294 MYCKCGSIENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
C G +E A+EVF+ + + + ++I G+ G + + F L +KP
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 350 DRVSF 354
+ V++
Sbjct: 539 NVVTY 543
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 166/404 (41%), Gaps = 51/404 (12%)
Query: 83 LYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHG 142
LY++N +I F R S A++L M+ +P +T S+ Y D L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 143 RVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE------------------------ 178
++V++G D T+IH SEA + D
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 179 ---------------KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWN 219
K+E DV+ N++I L K +D++ LF M + VT++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 220 SMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
S+IS GR +A ++ S+M E+ + P+ T +L++A G E ++ + +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 280 NFELNVIVLTAIIDMYCKCGSIENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHEREA 335
+ + ++ ++++ +C ++ A ++FE ++ + +N++I G + +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 336 VEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
E F ++ L D V++ ++ H G D A+ F MV+ + P I Y+ +++
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLD 478
Query: 396 VL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVE 436
L G+ ++ I D + +++ K G V+
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 176/422 (41%), Gaps = 20/422 (4%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
+ MV +R P P++ +N ++ ++ ISL M E+ TY + +
Sbjct: 73 FGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVI 185
+ L G+++KLG E +++++ Y + +S+A + D+ VE+ D I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNM 241
++I GL K E+ L + M R VT+ +++G + G AL + + M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 242 QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
+ +E +++++ + + + NV+ +++I C G
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 302 ENAIEVF----ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGV 357
+A ++ E+ L +N++I G EA + + + ++ PD ++ +
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 358 LTA-CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT-- 414
+ C H +D+AK F MV+ + P + Y +++ + + M+
Sbjct: 372 VNGFCMH-DRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 415 -INPDASTWGSLLSSCRKHGNVEIAKRA-AQKVCQLDPGDAGGYVLMSNVQAASNKFEEA 472
+ D T+ +L+ G+ + A++ Q V P D Y ++ + + K E+A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 473 ME 474
+E
Sbjct: 490 LE 491
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 13/288 (4%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
+NTII G + A LF M ++P TY + G D ++L ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL-----DVIACNSMIMGLAKCGKI 200
+ + D N +I + G L EA++++DE V+ DV+A N++I G K ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 201 DESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
+E +F M+ R VT+ ++I G+ + A VF M +GV P T L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
L+ + G+++ V Y+++ + +L+++ T +I+ CK G +E+ ++F +G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 317 S----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
+ +++ G G + EA F +++ P+ ++ ++ A
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 157/359 (43%), Gaps = 17/359 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P+L ++ +I G + P A++L M +++ + Y ++ + D L
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAK 196
++ G++ D F N +I N G S+A R+ + +E D++ N++I K
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 197 CGKIDESRRLFNNMAART-----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
GK+ E+ +L++ M V +N++I G+ + R++E +EVF M + G+ +
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE-- 309
T +L++ + + V + + +++ ++D C G++E A+ VFE
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 310 --RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
R+ + + + ++I L G + + F L +KP+ V++ +++ G
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWG 423
+EA F M + P+ Y ++ + IK M DAST+G
Sbjct: 513 EEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 161/373 (43%), Gaps = 17/373 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S NLY+++ I F R S A+++ M+ P +T S+ + +
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEA----KRVFDEKVELDVIACNSMIMGLA 195
L ++V++G + D T++H SEA +R+ + + D++ ++I GL
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 196 KCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G+ D + L N M V +N++I G + + +A ++F+ M+ +G++P F
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T L++ + G + S + N +++ A+ID + K G + A ++++
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 312 PRR-----GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
+ + +N++I G E +E F ++ L + V++ ++
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWG 423
D A+ F MV+ + P I Y +++ L G ++ + D T+
Sbjct: 407 CDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 424 SLLSSCRKHGNVE 436
+++ + K G VE
Sbjct: 466 TMIEALCKAGKVE 478
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 134/306 (43%), Gaps = 12/306 (3%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
AI LF DM+ S P + + + A A++ L ++ LG+ + + + I+
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ LS A + + ++L ++ NS++ G +I E+ L + M
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
VT+ +++ G ++ + EA+ + M +G +P T +++N G +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + + E +V++ IID CK +++A ++F + +G+ +N +I L
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G +A S + N+ PD V F ++ A G + EA+ + MV + P +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 390 YTCMVE 395
Y +++
Sbjct: 359 YNTLIK 364
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
Y MV ++ P++ ++NT+I+GF + + + +F +M + +TY ++ +
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVI 185
Q + + ++V G+ D N ++ N+G + A VF+ ++LD++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNM 241
+MI L K GK+++ LF +++ + VT+ +M+SG+ R G +EA +F M
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 242 QEEGVEPSEFTMVSLLNA 259
+E+G P+ T +L+ A
Sbjct: 523 KEDGPLPNSGTYNTLIRA 540
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 174/383 (45%), Gaps = 16/383 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S N+ + ++I G +++ A+ LF M P +T+ + + + + G +
Sbjct: 336 SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE 395
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL---DVIACNSMIMGLAK 196
+ ++ LGL F +TII + EA ++FDE E +V CN+++ L K
Sbjct: 396 FYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCK 455
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
GK DE+ L + M +R V++N+++ G+ R + A VFSN+ E+G++P+ +T
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE--- 309
L++ C Q+ V +++ +N E+N +V II+ CK G A E+
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 310 RNPRRGLSC--WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
R +SC +NSII G G AV + ++ + + P+ +++ ++ +
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
D+A M N ++ I Y +++ + + +NP + S
Sbjct: 636 DQALEMRDEMKNK-GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 425 LLSSCRKHGNVEIAKRAAQKVCQ 447
L+S R GN+ A +K+ +
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLK 717
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 171/386 (44%), Gaps = 24/386 (6%)
Query: 26 QNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----P 81
Q H +K F + +TGLA+ + + + C G + A + ++M S P
Sbjct: 423 QKHEEALKLFDES----FETGLANVFVCNTILSWLC--KQGKTDEATELLSKMESRGIGP 476
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
N+ S+N ++ G R A +F ++L ++P TY + + + ++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE-----LDVIACNSMIMGLAK 196
+ +E + + TII+ G S+A+ + +E + ++ NS+I G K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++D + + M +T+ S+++G +N R+ +ALE+ M+ +GV+
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+L++ +++ + S + + + ++I + G++ A++++++
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 313 RRGLSC----WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
+ GL C + ++I GL +G+ A E ++++Q+ L PD + + ++ G
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMV 394
+ F M + P++ Y ++
Sbjct: 777 KVVKMFEEM-KKNNVTPNVLIYNAVI 801
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 191/468 (40%), Gaps = 67/468 (14%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
Y+ MV + N+ + ++R R P A+ + + +P L Y +A
Sbjct: 221 YSRMVAIGVDGDNVTT-QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 130 Q-LGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDV 184
+ L + L K Q ++I G + +A R+ DE + ++V
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 185 IACNSMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSN 240
+A S+I G K + + LF+ M + +VT++ +I + +NG +++ALE +
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 241 MQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFEL---NVIVLTAIIDMYCK 297
M+ G+ PS F + +++ L +H E + + +FE NV V I+ CK
Sbjct: 400 MEVLGLTPSVFHVHTIIQGW--LKGQKHEEALKLF--DESFETGLANVFVCNTILSWLCK 455
Query: 298 CGSIENAIEVFERNPRRGLS----CWNSIIIG--------LAM----------------- 328
G + A E+ + RG+ +N++++G LA
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 329 ----------NGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV 378
N E+ A+E + + SSN++ + V + ++ +G +A+ + M+
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 379 NAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN- 434
+ S Y +++ G+ + G I+P+ T+ SL++ K+
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 435 ---VEIAKRAAQKVCQLDPGDAG----GYVLMSNVQAASNKFEEAMEQ 475
+E+ K +LD G G+ SN+++AS F E +E+
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRV 144
S+N+II GF + A++ + +M + + P +TY S+ + ++ +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 145 VKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC----NSMIMGLAKCGKI 200
G++ D +I + + A +F E +E + NS+I G G +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 201 DESRRLFNNM---AARTAV-TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
+ L+ M R + T+ ++I G +++G L A E+++ MQ G+ P E +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
+N + G + +++NN NV++ A+I + + G+++ A + + +G+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ ++ +I GF + S + A +LF ++L + P + Y S+ + LG L+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKC 197
+++K GL D T+I G L A ++ E + D I ++ GL+K
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 198 GKIDESRRLFNNMAARTA----VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
G+ + ++F M + +N++I+G+ R G L EA + M ++G+ P T
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 254 VSLLNACAHLGSLQ 267
L++ +G+LQ
Sbjct: 833 DILVS--GQVGNLQ 844
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIA----CNSMIMGLAKCGKIDE 202
G E + N +++ Y+ A + ++ +ELDVI N + L + + E
Sbjct: 157 FGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTE 216
Query: 203 SRRLFNNMAARTA----VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLN 258
++ L++ M A VT ++ +R + EALEV S E G EP +
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 259 ACAHLGSLQHGEWVHSYIRRNNFEL-NVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
AC L + ++ + + T++I K G++++AI + + G+S
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 318 ----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
S+I G N A+ F K++ P+ V+F ++ + G +++A +
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 374 FSLMVNAYEIEPSIKHYTCMVE 395
+ M + PS+ H +++
Sbjct: 397 YKKM-EVLGLTPSVFHVHTIIQ 417
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 162/375 (43%), Gaps = 17/375 (4%)
Query: 86 WNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVV 145
+NT++ +R ++++ML +V P TY + Y +LG + Q ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 146 KLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKID 201
+ GL+ D F ++I Y L A +VF+E + +A +I GL +ID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 202 ESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLL 257
E+ LF M T T+ +I + R EAL + M+E G++P+ T L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 258 NACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS 317
++ + + + NVI A+I+ YCK G IE+A++V E R LS
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 318 ----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYY 373
+N +I G + +A+ +K+ + PD V++ ++ G D A
Sbjct: 426 PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 374 FSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCR 430
SLM N + P YT M++ L + + +NP+ + +L+
Sbjct: 485 LSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 431 KHGNVEIAKRAAQKV 445
K G V+ A +K+
Sbjct: 544 KAGKVDEAHLMLEKM 558
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 172/403 (42%), Gaps = 25/403 (6%)
Query: 68 INYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPS 123
I+ A +F +M P + ++ +I+ S A++L +M + ++P TY
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD----EK 179
+ + +L G++++ GL + N +I+ Y G++ +A V + K
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 180 VELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA----VTWNSMISGYVRNGRLKEAL 235
+ + N +I G K + ++ + N M R VT+NS+I G R+G A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 236 EVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMY 295
+ S M + G+ P ++T S++++ ++ + + + NV++ TA+ID Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 296 CKCGSIENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDR 351
CK G ++ A + E +N +N++I GL +G +EA K+ L+P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 352 VSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXX 408
+ ++ G D A F M+++ +P YT ++ G+
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 409 XIKGMTINPDASTWGSLLSSCRKHGNV----EIAKRAAQKVCQ 447
++ ++PD T+ SL+ G ++ KR C+
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 129/304 (42%), Gaps = 30/304 (9%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+PN+ + +I G+ ++ A + ML P LT+ ++ G +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLA 195
L ++VK+GL+ +IH G A F + + + D + I
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 196 KCGKI----DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
+ G++ D ++ N + T++S+I GY G+ A +V M++ G EPS+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T +SL+ HL +++G ++ E + ++ +++ + +E+ E+
Sbjct: 709 TFLSLIK---HLLEMKYG-------KQKGSEPELCAMSNMME-------FDTVVELLEKM 751
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQ-SSNLKPDRVSFIGVLTACKHLGA 366
++ + +I+G+ G+ R A + F +Q + + P + F +L+ C L
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 367 IDEA 370
+EA
Sbjct: 812 HNEA 815
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 64/327 (19%)
Query: 177 DEKVELD---VIAC-NSMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRN 228
DE+ EL +I C N+++ LA+ G +DE ++++ M T+N M++GY +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 229 GRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVL 288
G ++EA + S + E G++P FT SL+
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMG----------------------------- 262
Query: 289 TAIIDMYCKCGSIENAIEVFERNP----RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQS 344
YC+ +++A +VF P RR + +I GL + EA++ F K++
Sbjct: 263 ------YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 345 SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE--IEPSIKHYTCMVEVLGQXXX 402
P ++ ++ K L + +L+ E I+P+I YT +++ L
Sbjct: 317 DECFPTVRTYTVLI---KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 403 XXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQ--KVCQLDPGD----- 452
+ M + P+ T+ +L++ K G +E A + + +L P
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 453 -AGGYVLMSNVQAASNKFEEAMEQRIL 478
GY SNV A + +E+++L
Sbjct: 434 LIKGYC-KSNVHKAMGVLNKMLERKVL 459
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 123/328 (37%), Gaps = 58/328 (17%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNLYSWN 87
+K+ + ++K GL ++ +L GD ++AY F +M S P+ +++
Sbjct: 583 LKEATLLEEKMVKIGL-QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 88 TIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKL 147
T I+ + R A + M + V P TY S+ K Y LG + + R+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 148 GLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLF 207
G E Q ++I L E K + E ++ A ++M+ + D L
Sbjct: 702 GCEPSQHTFLSLIKH------LLEMKYGKQKGSEPELCAMSNMM-------EFDTVVELL 748
Query: 208 NNMAART----AVTWNSMISGYVRNGRLKEALEVFSNMQE-EGVEPSEFTMVSLLNACAH 262
M + A ++ +I G G L+ A +VF +MQ EG+ PSE +LL+ C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 263 L-----------------------------------GSLQHGEWVHSYIRRNNFELNVIV 287
L G + G V + + + + +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 288 LTAIIDMYCKCGSIENAIEVFERNPRRG 315
IID K G +E E+F + G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNG 896
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 162/356 (45%), Gaps = 56/356 (15%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PNLY+++ +I G+ ++ + A L+ ++L +E+ P + + ++ + + L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAK 196
+VK G++ + ++ N +IH + SG + EA + E L DV +I GL
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
++ E+ RLF M ++ T+NS+I GY + +++AL++ S M GVEP+ T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF---- 308
+L++ ++ ++ ++ + +V+ TA+ID + K +++ A+ ++
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 309 --------------------------------ERNPRRGLSCWNSI-----IIGLAMNGH 331
E N +R SCWN + I GL NG+
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR--SCWNHVGFTCLIEGLCQNGY 564
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSI 387
A FFS ++S + PD S++ +L G + E + ++M+ I+ I
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLK-----GHLQEKRITDTMMLQCDMIKTGI 615
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
R+ +++EA ++F M++ GV P+ +T ++++ G+++ ++ I NV+
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 287 VLTAIIDMYCKCGSIENAIEVFERNPRRG----LSCWNSIIIGLAMNGHEREAVEFFSKL 342
V ++D +CK + A +F + G L +N +I G +G+ EAV S++
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 343 QSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
+S NL PD ++ ++ + EA F M N I PS Y ++
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLI 416
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 190/445 (42%), Gaps = 55/445 (12%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P + ++NT++ ++ + ++++M ++ ++TY + +++ G + +
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSM----IMGLAK 196
HG + + G + N +I Y GL +A V DE + + S I L
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 197 CGKIDESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
G+ID++R L ++MAA V++N+++ GY++ G+ EA +F +++ + PS T +L
Sbjct: 356 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 257 LNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG- 315
++ G+L+ + + + +VI T ++ + K G++ A EV++ R+G
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 316 ---------------------------------------LSCWNSIIIGLAMNGHEREAV 336
L+ +N I GL G+ +A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV-- 394
EF K+ L PD V++ V+ G A+ + M+ + PS+ Y ++
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIYG 594
Query: 395 -EVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD---- 449
G+ +K + P+ T +LL K GN++ A R +C+++
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY---LCKMEEEGI 651
Query: 450 PGDAGGYVLMSNVQAASNKFEEAME 474
P + Y ++ + K+EE ++
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVK 676
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 144/334 (43%), Gaps = 14/334 (4%)
Query: 66 GDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
G I+ A + + M +P++ S+NT++ G+ + A LF D+ ++ P +TY ++
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VE 181
+ G +L + + D T++ + +G LS A V+DE ++
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNMAAR-----TAVTWNSMISGYVRNGRLKEALE 236
D A + +G + G D++ RL M A +N I G + G L +A+E
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 237 VFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYC 296
+ G+ P T +++ G + ++ + R +VI +I +
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 297 KCGSIENAI----EVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRV 352
K G +E A E+ +R R + N+++ G+ G+ EA + K++ + P++
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 353 SFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
S+ +++ +E + M++ EIEP
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDK-EIEPD 689
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 21/268 (7%)
Query: 226 VRNGRL-KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELN 284
+R+ R+ +A V+ M E G+ P+ T ++L++C G L+ + + ++R N E +
Sbjct: 213 LRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFS 272
Query: 285 VIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMNGHEREAVEFFS 340
+ +I+ + K G +E A R G + +N +I G G +A
Sbjct: 273 EVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTD 332
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE---VL 397
++ ++ + P ++ + A G ID+A+ S M P + Y ++ +
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-----APDVVSYNTLMHGYIKM 387
Query: 398 GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKV-CQLDPGD---- 452
G+ ++ I+P T+ +L+ + GN+E A+R +++ QL D
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 453 ---AGGYVLMSNVQAASNKFEEAMEQRI 477
G+V N+ A+ ++E + + I
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGI 475
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 201/454 (44%), Gaps = 24/454 (5%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P+ ++ T++ G + + A++L M+ QP +TY +V + G L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
++ K +E D I +T+I + +A +F E + DV +S+I L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G+ ++ RL ++M R VT+NS+I + + G+L EA ++F M + ++P+ T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 253 MVSLLNA-CAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
SL+N C H L + + + + + +V+ +I+ +CK + + +E+F
Sbjct: 348 YNSLINGFCMH-DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 312 PRRGL----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
RRGL + ++I G A F ++ S + P+ +++ +L G +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGS 424
++A F + + ++EP I Y M E + G+ + + PD + +
Sbjct: 467 EKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 425 LLSSCRKHGNVEIAKRAAQKVCQLDP-GDAGGYVLMSNVQAASNKFEEAMEQRILMKENF 483
++S K G E A K+ + P D+G Y + ++A ++A L+KE
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL--IRAHLRDGDKAASAE-LIKEMR 582
Query: 484 TEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYS 517
+ + G +S YG V + L GRL E+ S
Sbjct: 583 SCRFAGDAST--YGLVTDMLHDGRLDKGFLEVLS 614
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 181/411 (44%), Gaps = 21/411 (5%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S NLY++N +I R S FA+++ M+ P +T S+ + +
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEA----KRVFDEKVELDVIACNSMIMGLA 195
L ++V++G + D T++H SEA +R+ + + D++ ++I GL
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 196 KCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G+ D + L N M V ++++I + + +AL +F+ M +G+ P F
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL++ + G + S + NV+ ++ID + K G + A ++F+
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHLGA 366
+R + +NS+I G M+ EA + F+ + S + PD V++ ++ CK
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWG 423
+D + + + + + + YT ++ Q K M ++P+ T+
Sbjct: 397 VDGMELFRDM--SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 424 SLLSSCRKHGNVEIAKRAAQKV--CQLDPGDAGGYVLMSNVQAASNKFEEA 472
+LL K+G +E A + + +++P D Y +MS + K E+
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVEDG 504
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
R +PN+ ++N++I F++ A LF +M+ + P +TY S+ +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC------- 356
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIM 192
+H R L EA+++F V DV+ N++I
Sbjct: 357 ---MHDR-------------------------LDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 193 GLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
G K K+ + LF +M+ R VT+ ++I G+ + A VF M +GV P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
+ T +LL+ G L+ V Y++++ E ++ + + CK G +E+ ++F
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 309 ERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
+G+ +N++I G G + EA F K++ PD ++ ++ A HL
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HL 566
Query: 365 GAIDEA 370
D+A
Sbjct: 567 RDGDKA 572
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 171/396 (43%), Gaps = 18/396 (4%)
Query: 73 MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLG 132
++ R + N+Y+ N +++G R+ A+SL +M + + P +Y +V + + +
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 133 AGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACN 188
+L + G +I + +G + EA E +E D++
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 189 SMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
S+I G CG++D + LF+ + R A+T+N++I G+ + G+LKEA E+F M E
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
GV P+ +T L++ +G + + + + + E N + II+ CK G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 305 IEVFE----RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKL--QSSNLKPDRVSFIGVL 358
+E+ E R R +N ++ GL G EA + + SS PD +S+ ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 359 TACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL--GQXXXXXXXXXXIKGMTIN 416
+ +A + L+V + + L G I I
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 417 PDASTWGSLLSSCRKHGNVEIAK--RAAQKVCQLDP 450
++ T+ +++ K G + +AK +V +L P
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 174/430 (40%), Gaps = 29/430 (6%)
Query: 46 GLAHDHIA-ASRVLTFCASSSGDINYAYM--VFTRMPSPNLYSWNTIIRGFSRSSTPQFA 102
GL D + S + FC D A V R SP ++NT+IRGF + + A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 103 ISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHM 162
+F M+ V+P TY + +G + QL +++ E + N II+
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 163 YANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA--- 215
GL+++A + + + D I N ++ GL G +DE+ +L M ++
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 216 ---VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWV 272
+++N++I G + RL +AL+++ + E+ T LLN+ G + +
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 273 HSYIRRNNFELNVIVLTAIIDMYCKCGSIENA------IEVFERNPRRGLSCWNSIIIGL 326
I + N TA+ID +CK G + A + V E P + +N ++ L
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP--SVFDYNCLLSSL 539
Query: 327 AMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPS 386
G +A F ++Q N PD VSF ++ G I A+ M A + P
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSPD 598
Query: 387 IKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGN----VEIAK 439
+ Y+ ++ LG + PDA S+L C G E+ K
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVK 658
Query: 440 RAAQKVCQLD 449
+ K LD
Sbjct: 659 KLVDKDIVLD 668
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 162/377 (42%), Gaps = 18/377 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P+++S+NT+IRGF + A+ L +M S +T+ + A+ + G +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIAC----NSMIMGLAK 196
+ +GLE D + ++I + + G L K +FDE +E C N++I G K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++ E+ +F M R T+ +I G G+ KEAL++ + M E+ EP+ T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
++N G + + +++ + I ++ C G ++ A ++
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 313 RRG------LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
+ + +N++I GL +A++ + L DRV+ +L + G
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWG 423
+++A + + ++ + S YT M++ G ++ + P +
Sbjct: 475 VNKAMELWKQISDSKIVRNS-DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 424 SLLSSCRKHGNVEIAKR 440
LLSS K G+++ A R
Sbjct: 534 CLLSSLCKEGSLDQAWR 550
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 164/403 (40%), Gaps = 28/403 (6%)
Query: 18 DQPCL----TMLQNHCT--TMKDFQQIHAHIIKTGL---AHDHIAASRVLTFCASSSGDI 68
D PC T+++ C +K+ +I +I+ G+ + + L + +
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 69 NYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAY 128
++ + PN ++N II + A+ + M +P +TY +
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 129 AQLGAGHDGAQLHGRVVKLG--LEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL---- 182
G + ++L ++K + D N +IH L +A ++D VE
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMA----ARTAVTWNSMISGYVRNGRLKEALEVF 238
D + N ++ K G ++++ L+ ++ R + T+ +MI G+ + G L A +
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
M+ ++PS F LL++ GSL + ++R+N +V+ +ID K
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 299 GSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
G I++A + R GLS ++ +I G+ EA+ FF K+ S +PD
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 355 IGVLTACKHLGAIDEAKYYFSLMVNA-----YEIEPSIKHYTC 392
VL C G D+ +V+ E+ ++ Y C
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 233/538 (43%), Gaps = 74/538 (13%)
Query: 14 KFISDQPCLTMLQN-HCTT--MKDFQQIHAHIIKTGL-AHDHIAASRVLTFCASSSGDIN 69
K ++DQ +L + +C T ++D ++H ++I+ G+ + I S + +C SG +
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC--KSGQLV 383
Query: 70 YAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVF 125
A +F+RM P+ +++NT++ G+ R+ A+ L M EV P +TY +
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 126 KAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE---- 181
K Y+++GA HD L ++K G+ D+ +T++ G +EA ++++ +
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 182 LDVIACNSMIMGLAKCGKIDESRRLFNNM---AARTAV-TWNSMISGYVRNGRLKEALEV 237
D I N MI GL K K++E++ + +N+ + AV T+ ++ GY + G LKEA V
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 238 FSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCK 297
M+ +G+ P+ +L++ L + +R V A+I +C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 298 CGSIENA----IEVFERNPRRGLSCWNSII---------------------IGLAMNGHE 332
G I+ A E+ E+ ++ + I L + G++
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 333 REAVEFFSKLQSSNLK------------------PDRVSF-IGVLTACKHLGAIDEAKYY 373
EF ++ LK P+ + + + + CK G +++A+
Sbjct: 684 -SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKA-GKLEDARKL 741
Query: 374 FSLMVNAYEIEPSIKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCR 430
FS ++++ P YT ++ + G + I P+ T+ +L+
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 431 KHGNVEIAKRAAQKVCQ--LDPGDAGGYVLMSNVQAASNKFEEAMEQRILMKENFTEK 486
K GNV+ A+R K+ Q + P +A Y + + S EAM +KE EK
Sbjct: 802 KLGNVDRAQRLLHKLPQKGITP-NAITYNTLIDGLVKSGNVAEAMR----LKEKMIEK 854
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 146/324 (45%), Gaps = 19/324 (5%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
SP ++ + I++ ++ + A+ +F +M P L+ S+ + G
Sbjct: 154 SPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH 211
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK-----VELDVIACNSMIMGL 194
++ +++ + D F + +++ Y SG + +A E +EL+V+ NS+I G
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 195 AKCGKIDESRRLFNNMA----ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
A G ++ R+ M+ +R VT+ S+I GY + G ++EA VF ++E+ + +
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
L++ G ++ VH + N + ++I+ YCK G + A ++F R
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 311 NPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
L +N+++ G G+ EA++ ++ + P +++ +L +GA
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 367 IDEAKYYFSLM----VNAYEIEPS 386
+ + +M VNA EI S
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCS 475
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 119/283 (42%), Gaps = 16/283 (5%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P + +NT+I G + L +++ + P TY ++ + +G
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIA---------CNSMI 191
+++ G+ + I + I + + EA + + V+ D++ +
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 192 MGLAKCGKIDES--RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNM-QEEGVEP 248
K KI ES + + +N I+G + G+L++A ++FS++ + P
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
E+T L++ CA G + + + N++ A+I CK G+++ A +
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 309 ERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
+ P++G++ +N++I GL +G+ EA+ K+ L
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 17/234 (7%)
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN-NFELN 284
VR G AL V+ M V P FT ++NA G++ + ELN
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 285 VIVLTAIIDMYCKCGSIENAIEVF----ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFS 340
V+ ++I+ Y G +E V ER R + + S+I G G EA F
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 341 KLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL--- 397
L+ L D+ + ++ G I +A + V+ IE ++ T + L
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDA-----VRVHDNMIEIGVRTNTTICNSLING 375
Query: 398 ----GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
GQ + ++ PD T+ +L+ + G V+ A + ++CQ
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 210/498 (42%), Gaps = 79/498 (15%)
Query: 46 GLAHDHI-AASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAIS 104
GL+ D I ASR+L+ +V P+PN+ ++ T+I GF + A
Sbjct: 261 GLSVDQIEVASRLLS-------------LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 105 LFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA 164
LF M ++P + Y ++ Y + G G +L + + G++ D + ++ I +Y
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 165 NSGLLSEA----KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAV 216
SG L+ A KR+ + + +V+ +I GL + G+I E+ ++ + R + V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
T++S+I G+ + G L+ ++ +M + G P L++ + G + H +
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFE--------------------------- 309
+ LNV+V ++ID +C+ + A++VF
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 310 ---RNPRRGLSCWN--------------SIIIGLAMNGHERE-AVEFFSKLQSSNLKPDR 351
P GL ++ +++I L H E A +FF+ L ++PD
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 352 VSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIK 411
V++ ++ L +DEA+ F L+ P+ T ++ VL +
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELL-KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 412 GMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ--LDPGDAGGYVLMSN----- 461
M P+A T+G L+ K ++E + + +++ + + P +++
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 462 -VQAASNKFEEAMEQRIL 478
V A+N F +A++ ++L
Sbjct: 727 RVDEATNIFHQAIDAKLL 744
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 164/390 (42%), Gaps = 62/390 (15%)
Query: 65 SGDINYAYMVFTRM----PSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
SGD+ A +V+ RM SPN+ ++ +I+G + A ++ +L ++P +T
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKR----VF 176
Y S+ + + G G L+ ++K+G D I ++ + GL+ A R +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 177 DEKVELDVIACNSMIMGLAKCGKIDESRRLF----------------------------- 207
+ + L+V+ NS+I G + + DE+ ++F
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 208 -----------------NNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
N ++A AV N +I + R+++A + F+N+ E +EP
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVC-NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T +++ L L E + ++ F N + LT +I + CK ++ AI +F
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Query: 311 NPRRGLSCWNSIIIGLAMNGHERE-----AVEFFSKLQSSNLKPDRVSFIGVLTACKHLG 365
+G S N++ G M+ + + + F ++Q + P VS+ ++ G
Sbjct: 668 MAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 366 AIDEAKYYFSLMVNAYEIEPSIKHYTCMVE 395
+DEA F ++A ++ P + Y ++
Sbjct: 727 RVDEATNIFHQAIDA-KLLPDVVAYAILIR 755
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 157/368 (42%), Gaps = 33/368 (8%)
Query: 38 IHAHIIKTGLAHDHIAASRVLT-FCASS---SGDINYAYMVFTRMPSPNLYSWNTIIRGF 93
++ I+K G+ + S ++ FC SG Y M+ P P++ + ++ G
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGL 471
Query: 94 SRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQ 153
S+ A+ V ML ++ + + S+ + +L + ++ + G++ D
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 154 FISNTII-----------HMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCG 198
T++ HM GL ++FD K+ D+ CN +I L KC
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMKPTIGL-----QLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 199 KIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMV 254
+I+++ + FNN+ VT+N+MI GY RL EA +F ++ P+ T+
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 255 SLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRR 314
L++ + + S + + N + ++D + K IE + ++FE +
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 315 GLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
G+S ++ II GL G EA F + + L PD V++ ++ +G + EA
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 371 KYYFSLMV 378
+ M+
Sbjct: 767 ALLYEHML 774
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 10/243 (4%)
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACN 188
L A H G + G+ F+ + + + L + V + + +++CN
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 189 SMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
++ GL+ +I+ + RL + + A VT+ ++I+G+ + G + A ++F M++
Sbjct: 257 KVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
G+EP +L++ G L G + S +L+V+V ++ ID+Y K G + A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 305 IEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA 360
V++R +G+S + +I GL +G EA + ++ ++P V++ ++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 361 -CK 362
CK
Sbjct: 436 FCK 438
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 137/341 (40%), Gaps = 54/341 (15%)
Query: 29 CTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSP----NLY 84
C ++ ++ +IK G D + VL S G + +A +M N+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPD-VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK------AYAQLGAGHDGA 138
+N++I G+ R + A+ +F M ++P T+ +V + A+ + G
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGL 194
QL + + + D + N +IH+ + +A + F+ K+E D++ N+MI G
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 195 AKCGKIDESRRLF------------------------NN-----------MAAR----TA 215
++DE+ R+F NN MA + A
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
VT+ ++ + ++ ++ + ++F MQE+G+ PS + +++ G + +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL 316
+V+ +I YCK G + A ++E R G+
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ ++NT+I G+ A +F + + P +T + + ++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
+ + G + + ++ ++ S + + ++F+E + +++ + +I GL K
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 197 CGKIDESRRLFNN-MAAR---TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++DE+ +F+ + A+ V + +I GY + GRL EA ++ +M GV+P +
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Query: 253 MVSLLNACAHLGSLQHGEWVHS 274
+L + G WVH
Sbjct: 785 QRALSEYNPPKWLMSKGVWVHD 806
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 174/383 (45%), Gaps = 20/383 (5%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ S ++ G PQ A S+F ++ +P +TY ++ A + H L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAKC 197
+V K GL+ D + N II+ + SG L +A ++F++ E N++I G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 198 GKIDESRRLFNNMAARTAV-----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
GK++ES RL + M + T N ++ + +++EA + MQ GV+P T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 253 MVSLLNACAHLGSLQHGE-WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
+L A A +GS E + + N + NV I++ YC+ G +E A+ F R
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 312 PRRG----LSCWNSIIIGLAMNGHEREAV-EFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
G L +NS+I G +N ++ + V E ++ +KPD V+F ++ A +G
Sbjct: 558 KELGVHPNLFVFNSLIKGF-LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWG 423
+ + ++ M+ I+P I ++ + + G+ ++ + P+ +
Sbjct: 617 MKRCEEIYTDMLEG-GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 424 SLLSSCRKHGNVEIAKRAAQKVC 446
++S G ++ A + +K+C
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMC 698
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 164/401 (40%), Gaps = 58/401 (14%)
Query: 23 TMLQNHCTTMKDFQQIHAHIIKT---GLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP 79
T L T K F + + I K GL D I + ++ +S SG+++ A +F +M
Sbjct: 358 TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN-ASSESGNLDQAMKIFEKMK 416
Query: 80 ----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAG 134
P ++NT+I+G+ + + + L ML E +QP T + +A+
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 135 HDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAK-----RVFDEKVELDVIACNS 189
+ + ++ G++ D NT+ YA G A+ R+ KV+ +V C +
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 190 MIMGLAKCGKIDESRRLFNNM--------------------------------------- 210
++ G + GK++E+ R F M
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 211 AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGE 270
VT++++++ + G +K E++++M E G++P L A G + E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 271 WVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER-----NPRRGLSCWNSIIIG 325
+ + +R+ NV++ T II +C G ++ A++V+++ L+ + ++I G
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 326 LAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
+A E ++ N+ P R + + K +G
Sbjct: 717 FGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 144/299 (48%), Gaps = 16/299 (5%)
Query: 67 DINYAYMVFTRMPSPNL----YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYP 122
D+N A VF M + ++NT+I G S S A L DM+ ++ P + +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 123 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL 182
++ + + G + L+ +++ + + F N++I+ + G L +AK +FD V
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 183 ----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEA 234
DV+ N++I G K ++++ +LF M + A T+N++I GY + G+L A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
+VF+ M + GV P T LL+ + G ++ + ++++ ++++I II
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 295 YCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
C+ ++ A +F R+G+ + ++I GL G +REA + +++ P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%), Gaps = 12/302 (3%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN+ +NT+I G ++ A+ +F M ++ +TY ++ + G D A+L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVI----ACNSMIMGLAK 196
+VK ++ + +I + G L EA+ ++ E + V+ NS+I G
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G + +++ +F+ M ++ VT+N++I+G+ ++ R+++ +++F M +G+ FT
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+L++ G L + V + + +++ ++D C G IE A+ + E
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 313 RRGLSC----WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
+ + +N II GL +EA F L +KPD +++I +++ G
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 369 EA 370
EA
Sbjct: 482 EA 483
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 66 GDINYAY-MVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSV 124
GD Y + ++ ++ P++ ++NT+I GF +S + + LF +M + TY ++
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 125 FKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KV 180
Y Q G + ++ R+V G+ D N ++ N+G + +A + ++ ++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 181 ELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALE 236
++D+I N +I GL + K+ E+ LF ++ + A+ + +MISG R G +EA +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 237 VFSNMQEEGVEPSE 250
+ M+E+G PSE
Sbjct: 486 LCRRMKEDGFMPSE 499
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 22/355 (6%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A SLF +ML S P + + V A++ L+ ++ LG+ D + +IH
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAA----R 213
+ LS A + + ++L ++ S++ G + + E+ L ++M
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
V +N++I+G +N L ALEVF M+++G+ T +L++ ++ G +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + + NVI TA+ID + K G++ A +++ RR + +NS+I G ++
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHLGAIDEAKY-----YFSLMVNAYEI 383
G +A F + S PD V++ ++T CK D K Y L+ +A+
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 384 EPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
I Y C G+ + ++PD T+ LL +G +E A
Sbjct: 363 NTLIHGY-CQA---GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 164/372 (44%), Gaps = 24/372 (6%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ ++ TI+ G + + A++L M + ++P + Y ++ + G D L
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKC 197
+++ G+ + F N +I + + G S+A+R+ + +E DV+ N++I K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 198 GKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
GK+ E+ +L + M R VT+NSMI G+ ++ R +A +F M P T
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTF 435
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
++++ + G + I R N +I +C+ ++ A ++F+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 314 RG-----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
G ++C N ++ G N EA+E F +Q S + D V++ ++ +D
Sbjct: 496 HGVCPDTITC-NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 369 EAKYYF-SLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGS 424
EA F SL ++ +EP ++ Y M+ M N PD ST+ +
Sbjct: 555 EAWDLFCSLPIHG--VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 425 LLSSCRKHGNVE 436
L+ C K G ++
Sbjct: 613 LIRGCLKAGEID 624
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 8/299 (2%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+PN++++N +I GF A L DM+ E+ P LT+ ++ A + G + +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
L ++ + D N++I+ + +AK +FD DV+ N++I + +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 200 IDESRRLFNNMAARTAV----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
+DE +L ++ R V T+N++I G+ L A ++F M GV P T
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
LL L+ + I+ + +L+ + II CK ++ A ++F P G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 316 ----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
+ +N +I G +A F K++ + +PD ++ ++ C G ID++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 174/411 (42%), Gaps = 46/411 (11%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
+ YMV +R P N +I F R + P AISL+ M + ++ + K +
Sbjct: 94 FDYMVRSR-PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH----------------MYANSGLLSEAK 173
G++ KLG + D NT++H +G L EA
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAV 211
Query: 174 RVFDEKVELD----VIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGY 225
+FD+ VE+ VI N++I GL G++ E+ L N M + VT+ ++++G
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
+ G K AL + S M+E ++P ++++ G +++ S + NV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 286 IVLTAIIDMYCKCGSIENA----IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
+ID +C G +A ++ ER + +N++I G EA + +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 342 LQSSNLKPDRVSFIGVLTA-CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQX 400
+ + PD V++ ++ CKH D+AK+ F LM + P + + +++V +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKH-NRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRA 445
Query: 401 XXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNVEIAK-RAAQKVCQ 447
++ ++ + + +T+ +L+ HG E+ AAQ + Q
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLI-----HGFCEVDNLNAAQDLFQ 491
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 55 SRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV 114
S + FC + D A +F M SP++ ++NTII + R+ + L ++ +
Sbjct: 406 SMIYGFCKHNRFD--DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 115 QPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKR 174
TY ++ + ++ + L ++ G+ D N +++ + + L EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 175 VFD----EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYV 226
+F+ K++LD +A N +I G+ K K+DE+ LF ++ T+N MISG+
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
+ +A +F M++ G EP T +L+ C G + + S +R N F +
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 287 VLTAIIDMYCKCGSIENAIEVFER 310
+ ++ C+ S E IE + R
Sbjct: 644 TIKMAEEIICRV-SDEEIIENYLR 666
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 24/372 (6%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
++ ++ TI+ G + + A++L M + ++P + Y ++ + G D L
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKC 197
+++ G+ + F N +I + + G S+A+R+ + +E DV+ N++I K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 198 GKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
GK+ E+ +L + M R VT+NSMI G+ ++ R +A +F M P T
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTF 435
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
++++ + G + I R N +I +C+ ++ A ++F+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 314 RG-----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
G ++C N ++ G N EA+E F +Q S + D V++ ++ +D
Sbjct: 496 HGVCPDTITC-NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 369 EA-KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGS 424
EA + SL ++ +EP ++ Y M+ M N PD ST+ +
Sbjct: 555 EAWDLFCSLPIHG--VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 425 LLSSCRKHGNVE 436
L+ C K G ++
Sbjct: 613 LIRGCLKAGEID 624
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 8/306 (2%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
+PN++++N +I GF A L DM+ E+ P LT+ ++ A + G + +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGK 199
L ++ + D N++I+ + +AK +FD DV+ N++I + +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 200 IDESRRLFNNMAARTAV----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
+DE +L ++ R V T+N++I G+ L A ++F M GV P T
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
LL L+ + I+ + +L+ + II CK ++ A ++F P G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 316 ----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
+ +N +I G +A F K++ + +PD ++ ++ C G ID++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 372 YYFSLM 377
S M
Sbjct: 628 ELISEM 633
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 37/356 (10%)
Query: 70 YAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYA 129
+ YMV +R P N +I F R + P AISL+ M + ++ + K +
Sbjct: 94 FDYMVRSR-PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 130 QLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH----------------MYANSGLLSEAK 173
G++ KLG + D NT++H +G L EA
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAV 211
Query: 174 RVFDEKVELD----VIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGY 225
+FD+ VE+ VI N++I GL G++ E+ L N M + VT+ ++++G
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNV 285
+ G K AL + S M+E ++P ++++ G +++ S + NV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 286 IVLTAIIDMYCKCGSIENA----IEVFERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSK 341
+ID +C G +A ++ ER + +N++I G EA + +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 342 LQSSNLKPDRVSFIGVLTA-CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
+ + PD V++ ++ CKH D+AK+ F LM + P + + +++V
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKH-NRFDDAKHMFDLMAS-----PDVVTFNTIIDV 441
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 10/248 (4%)
Query: 55 SRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEV 114
S + FC + D A +F M SP++ ++NTII + R+ + L ++ +
Sbjct: 406 SMIYGFCKHNRFD--DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 115 QPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKR 174
TY ++ + ++ + L ++ G+ D N +++ + + L EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 175 VFD----EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYV 226
+F+ K++LD +A N +I G+ K K+DE+ LF ++ T+N MISG+
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
+ +A +F M++ G EP T +L+ C G + + S +R N F +
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 287 VLTAIIDM 294
+ + D+
Sbjct: 644 TIKMVADL 651
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 36/280 (12%)
Query: 179 KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEA 234
++ L++ + N +I C K+ S F + VT+N+++ G R+ EA
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 235 LEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
L +F M E G V+L + +G VI +I+
Sbjct: 196 LALFGYMVETGF----LEAVALFDQMVEIG----------------LTPVVITFNTLING 235
Query: 295 YCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD 350
C G + A + + +GL + +I+ G+ G + A+ SK++ +++KPD
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 351 RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXI 410
V + ++ G +A+Y FS M+ I P++ Y CM++ +
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 411 KGMT---INPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQ 447
+ M INPD T+ +L+S+ K G + A+K+C
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKL----FEAEKLCD 390
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 16/306 (5%)
Query: 71 AYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
A +FT M + P++++++++I A L DM+ ++ P +T+ ++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD--- 183
A+ + G + +L+ ++K ++ D F +++I+ + L EAK +F+ + D
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 184 -VIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVF 238
V+ +++I G K +++E LF M+ R VT+ ++I G+ + A VF
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
M GV P+ T LL+ G L V Y++R+ E ++ +I+ CK
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 299 GSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
G +E+ E+F +G+S +N++I G G + EA K++ P+ ++
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 355 IGVLTA 360
++ A
Sbjct: 577 NTLIRA 582
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 162/374 (43%), Gaps = 16/374 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S +LY+++ I F R S A+++ M+ +P +T S+ Y D
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLA 195
L ++V++G + D F T+IH SEA + D+ V+ D++ +++ GL
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 196 KCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G ID + L M V +N++I G + + +AL +F+ M +G+ P F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL++ + G + S + NV+ +A+ID + K G + A ++++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+R + ++S+I G M+ EA F + S + P+ V++ ++ +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGS 424
+E F M + ++ YT ++ Q K M ++P+ T+
Sbjct: 415 EEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 425 LLSSCRKHGNVEIA 438
LL K+G + A
Sbjct: 474 LLDGLCKNGKLAKA 487
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 206/484 (42%), Gaps = 65/484 (13%)
Query: 38 IHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRG 92
+ A ++K G D + S +L +C S I+ A + +M P+ +++ T+I G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKR--ISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ A++L M+ QP +TY +V + G L ++ K +E D
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFN 208
I NTII + +A +F E + DV +S+I L G+ ++ RL +
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 209 NMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA-CAHL 263
+M R VT++++I +V+ G+L EA +++ M + ++P FT SL+N C H
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL------- 316
+ I ++ F NV+ + +I +CK +E +E+F +RGL
Sbjct: 378 RLDEAKHMFELMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 317 -----------SC---------------------WNSIIIGLAMNGHEREAVEFFSKLQS 344
C +N ++ GL NG +A+ F LQ
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 345 SNLKPDRVSF-IGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
S ++PD ++ I + CK D + + +L + + P++ Y M+ +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG--VSPNVIAYNTMISGFCRKGSK 554
Query: 404 XXXXXXIKGMTIN---PDASTWGSLLSSCRKHGNVEIAKRAAQKV--CQLDPGDAGGYVL 458
+K M + P++ T+ +L+ + + G+ E + +++ C GDA L
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF-AGDASTIGL 613
Query: 459 MSNV 462
++N+
Sbjct: 614 VTNM 617
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 134/305 (43%), Gaps = 13/305 (4%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ LF DM+ S P + + + A A++ L ++ LG+ D + + I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ LS A V + ++L D++ +S++ G +I ++ L + M
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
T+ ++I G + + EA+ + M + G +P T +++N G + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + E +V++ IID CK +++A+ +F +G+ ++S+I L
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G +A S + + P+ V+F ++ A G + EA+ + M+ I+P I
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFT 365
Query: 390 YTCMV 394
Y+ ++
Sbjct: 366 YSSLI 370
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 183/414 (44%), Gaps = 23/414 (5%)
Query: 38 IHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRG 92
+ A ++K G D + S +L +C S I+ A + +M P+ +++ T+I G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKR--ISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 93 FSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKD 152
+ A++L M+ QP +TY +V + G L ++ ++ +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 153 QFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFN 208
I NTII + A +F E + +V+ NS+I L G+ ++ RL +
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 209 NMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA-CAHL 263
NM + VT+N++I + + G+L EA ++ M + ++P T L+N C H
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH- 376
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL----SCW 319
L + + ++ + N+ +I+ +CKC +E+ +E+F +RGL +
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVN 379
+II G G A F ++ S+ + D +++ +L G +D A F +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 380 AYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSS-CRKH 432
+ E+E +I Y M+E + + ++I PD T+ +++S C K
Sbjct: 497 S-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 163/374 (43%), Gaps = 16/374 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S +LY+++ I F R S A+++ M+ +P +T S+ Y D
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLA 195
L ++V++G + D F T+IH SEA + D+ V+ D++ +++ GL
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 196 KCGKIDESRRLFNNM-AAR---TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K G ID + L N M AAR V +N++I + ++ A+++F+ M+ +G+ P+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SL+N + G + S + NV+ A+ID + K G + A ++ E
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
+R + +N +I G M+ EA + F + S + P+ ++ ++ +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGS 424
++ F M + ++ YT +++ Q K M N D T+
Sbjct: 415 EDGVELFREMSQRGLVGNTVT-YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 425 LLSSCRKHGNVEIA 438
LL +G ++ A
Sbjct: 474 LLHGLCSYGKLDTA 487
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPS----PNLYSWNTII 90
+++H +I+ + D I + ++ FC + ++ A +F M S PN+ ++NT+I
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNR--LDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 91 RGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLE 150
GF + + + LF +M + +TY ++ + + Q G + ++V +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 151 KDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAKCGKIDESRRL 206
D + ++H + G L A +F ++EL++ N+MI G+ K GK+ E+ L
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 207 FNNMAAR-TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNA 259
F +++ + VT+N+MISG L+EA ++F M+E+G P+ T +L+ A
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 151/362 (41%), Gaps = 20/362 (5%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ LF DM+ S P + + + A A++ L ++ LG+ D + + I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ LS A V + ++L D++ +S++ G +I ++ L + M
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
T+ ++I G + + EA+ + M + G +P T +++N G + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + + NV++ IID CK +E A+++F +G+ +NS+I L
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G +A S + + P+ V+F ++ A G + EA+ M+ I+P
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTIT 365
Query: 390 YTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGSLLS---SCRK-HGNVEIAKRAA 442
Y ++ K M P+ T+ +L++ C++ VE+ + +
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 443 QK 444
Q+
Sbjct: 426 QR 427
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 141/306 (46%), Gaps = 12/306 (3%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P L + NT++ G + A+ L M+ + QP ++TY V + G +L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
++ + ++ D + II G L A +F+E + D+I N++I G
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G+ D+ +L +M R VT++ +I +V+ G+L+EA ++ M + G+ P+ T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
SL++ L+ + + + +++ +I+ YCK I++ +E+F
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 313 RRGL----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
RG+ +N+++ G +G A + F ++ S ++PD VS+ +L G ++
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 369 EAKYYF 374
+A F
Sbjct: 491 KALEIF 496
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 18/320 (5%)
Query: 65 SGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
G ++ A+ +F M ++ ++NT+I GF + L DM+ ++ P +T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
+ + ++ + G + QL +++ G+ + N++I + L EA ++ D +
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 181 ----ELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLK 232
+ D++ N +I G K +ID+ LF M+ R VT+N+++ G+ ++G+L+
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
A ++F M V P + LL+ G L+ + I ++ EL++ + II
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 293 DMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
C +++A ++F P +G+ +N +I L +A F K+
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 349 PDRVSFIGVLTACKHLGAID 368
PD +++ ++ A HLG D
Sbjct: 576 PDELTYNILIRA--HLGDDD 593
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 182/425 (42%), Gaps = 29/425 (6%)
Query: 65 SGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
+G ++ A ++ RM PN ++ ++ +S A+ L M ++ +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE-- 178
Y + + G+ + L + G + D NT+I + N+G + ++ +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 179 --KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLK 232
K+ +V+ + +I K GK+ E+ +L M R +T+NS+I G+ + RL+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
EA+++ M +G +P T L+N + G + + N + ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 293 DMYCKCGSIENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
+C+ G +E A ++F+ R R + + ++ GL NG +A+E F K++ S ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 349 PDRVSFIGVLTACKHLGAIDEA-KYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXX 407
D ++ ++ + +D+A + SL + +++ + Y M+ L +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA--RAYNIMISELCRKDSLSKAD 563
Query: 408 XXIKGMTIN---PDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD----PGDAGGYVLMS 460
+ MT PD T+ L+ R H + A AA+ + ++ P D ++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILI---RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 461 NVQAA 465
N+ ++
Sbjct: 621 NMLSS 625
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 132/306 (43%), Gaps = 13/306 (4%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ LF DM+ S P + + +F A A+ L ++ G+ + + +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 162 MYANSGLLSEA----KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
+ LS A ++ E D + N+++ GL ++ E+ L + M
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
T +T N++++G NG++ +A+ + M E G +P+E T +LN G +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMN 329
+ N +L+ + + IID CK GS++NA +F +G +N++I G
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G + + + + P+ V+F ++ + G + EA M+ I P+
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTIT 370
Query: 390 YTCMVE 395
Y +++
Sbjct: 371 YNSLID 376
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 21/388 (5%)
Query: 71 AYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFK 126
A ++F RM PN +++ +I F R A+S +M+ + ++ Y S+
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 127 AYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VEL 182
+ + G ++ LE +++ Y + G +++A R++ E +
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 183 DVIACNSMIMGLAKCGKIDESRRLFNNMAARTA----VTWNSMISGYVRNGRLKEALEVF 238
+ +++ GL + G I ++ +LFN MA VT+N MI GY G + +A E
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 239 SNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKC 298
M E+G+ P ++ L++ G + + + N ELN I T ++ +C+
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 299 GSIENAIEVFERNPRRG----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSF 354
G +E A+ V + +RG L C+ +I G + + ++ LKPD V +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 355 IGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIK 411
++ A G EA + LM+N + P+ YT ++ L G ++
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCV-PNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 412 GMTINPDASTWGSLLSSCRKHGNVEIAK 439
++ P+ T+G L K G V++ K
Sbjct: 745 PVSSVPNQVTYGCFLDILTK-GEVDMQK 771
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 155/393 (39%), Gaps = 86/393 (21%)
Query: 64 SSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKL 119
S G IN A ++ M +P++Y++ T++ G R+ + A+ LF +M V+P ++
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 120 TYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE- 178
TY + + Y + G + + + G+ D + +IH +G SEAK D
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 179 ---KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA-------------------- 215
EL+ I ++ G + GK++E+ + M R
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 216 -------------------VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSL 256
V + SMI + G KEA ++ M EG P+E T ++
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 257 LNACAHLGSLQHGEWVHSYIR-------------------------RNNFELNVIVL--- 288
+N G + E + S ++ + EL+ +L
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 289 ---TAIIDM----YCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVE 337
TA +M +C+ G IE A E+ R G+S + ++I L ++A+E
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 338 FFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEA 370
++ + ++PDRV++ ++ C G + +A
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 153/363 (42%), Gaps = 19/363 (5%)
Query: 47 LAHDHIAASRVLTFCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLF 106
L ++ + RVL G + + M+ P + + + ++ G + A+ LF
Sbjct: 162 LIQHYVRSRRVL------DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 107 VDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS 166
DM+ ++P Y V ++ +L ++ + G + + N +I
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 167 GLLSEA----KRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMA----ARTAVTW 218
+ EA K + + ++ DV+ +++ GL K + + + + M + +
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 219 NSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRR 278
+S++ G + G+++EAL + + + GV P+ F +L+++ E + + +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 279 NNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMNGHERE 334
N + + +IDM+C+ G ++ A+ GL +NS+I G G
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
A F +++ + L+P V++ ++ G I++A + M I PSI +T ++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLL 514
Query: 395 EVL 397
L
Sbjct: 515 SGL 517
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
+L + +I G + + L +M ++P + Y S+ A ++ G + +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMG-----LAK 196
++ G ++ +I+ +G ++EA+ V K++ N + G L K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAE-VLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 197 CGKIDESRR------LFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
G++D + + + A TA T+N +I G+ R GR++EA E+ + M +GV P
Sbjct: 765 -GEVDMQKAVELHNAILKGLLANTA-TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
T +++N ++ + + + + + +I C G + A E+
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 311 NPRRGL 316
R+GL
Sbjct: 883 MLRQGL 888
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 26/296 (8%)
Query: 229 GRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVL 288
G +EA+EV ++ +G ++ L C +L+ VH I +V
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 289 TAIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAM-----NGHEREAVEFFSKLQ 343
AII+MY C S+++A++VFE P WNS + + M NG+ EA++ F++ +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 344 SSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXX 403
KP+ F V + C G + E F M Y I PS++HY + ++L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 404 XXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDAGGYVLMSNVQ 463
++ M + P W +L++ R HG+VE+ R A+ V +LD + V
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA------TRLDKVS 326
Query: 464 AASNKFEEAMEQRILMKENFTEKEPGCSSIELYGEVHEFLAGGRLHPKTQEIYSLL 519
+A +A +F +KEP S + F HP+ IY L
Sbjct: 327 SAGLVATKA--------SDFVKKEPSTRSEPYF--YSTFRPVDSSHPQMNIIYETL 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 171 EAKRVFDEKV-----ELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAVTWNSMISGY 225
EA RV E + DV A N++I + C +D++ ++F M + T M+ +
Sbjct: 136 EAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCF 195
Query: 226 VRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW-VHSYIRRNNFELN 284
V NG +EA+++F+ +EEG +P+ + + C G ++ G + R +
Sbjct: 196 VNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPS 255
Query: 285 VIVLTAIIDMYCKCGSIENAIEVFERNPRR-GLSCWNSIIIGLAMNGHER---EAVEFFS 340
+ ++ M G ++ A+ ER P + W +++ ++G E
Sbjct: 256 MEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVE 315
Query: 341 KLQSSNLKPDRVSFIGVL 358
KL ++ L D+VS G++
Sbjct: 316 KLDATRL--DKVSSAGLV 331
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 161/351 (45%), Gaps = 17/351 (4%)
Query: 65 SGDINYAYM-VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPS 123
S D+ Y Y + R PN++++N +I ++ A + DM P ++Y +
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANS--------GLLSEAKRV 175
+ Y +LG G+ V+K +E D + T ++ + G + K +
Sbjct: 264 LIDGYCKLG-GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 176 FDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRL 231
D+ V+ +VI+ NS+I GL GKI E+ + + M + +T+N++I+G+ +N L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAI 291
KEAL++F +++ +G P+ L++A LG + G + + R +V +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 292 IDMYCKCGSIENAIEVFERNPRRGLS---CWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
I C+ G+IE A ++F++ +GL ++ ++ G G R+A ++ LK
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 349 PDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
P +++ V+ G + A + M + ++ Y +++ Q
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 140/308 (45%), Gaps = 21/308 (6%)
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLF 207
+ I++ ++ YAN+ F +L ++C +++ L K + + ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 208 NNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
M R T+N +I+ + G++ +A +V +M+ G P+ + +L++ L
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 264 G---SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF----ERNPRRGL 316
G + + V + N+ N+ +ID + K ++ +++VF +++ + +
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 317 SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHLGAIDEAKYYFS 375
+NS+I GL G EA+ K+ S+ ++P+ +++ ++ CK+ + EA F
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN-DMLKEALDMFG 390
Query: 376 LMVNAYEIEPSIKHYTCMVEV---LGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKH 432
V P+ + Y +++ LG+ ++ I PD T+ L++ ++
Sbjct: 391 -SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 433 GNVEIAKR 440
GN+E AK+
Sbjct: 450 GNIEAAKK 457
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P++ ++N +I G R+ + A LF D L S+ P +T+ + + Y + G A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAML 492
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
+ K+GL+ N ++ Y G L A + + +
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ---------------------M 531
Query: 201 DESRRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
++ RRL N+A ++N ++ GY + G+L++A + + M E+G+ P+ T
Sbjct: 532 EKERRLRMNVA-----SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 65 SGDINYAYMVFTRMPSPNL----YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
+G++N A + M L ++NT++ G S A + DM+ + P +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
+ ++ + + G + +L+ +++ ++ + N+II+ G L +AK+ FD
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 181 EL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLK 232
+V+ N++I G K +DE +LF M+ T+N++I GY + G+L+
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
AL++F M V P T LL+ G ++ +R + + ++ +I
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 293 DMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
CK +E A E+F R P G+ + +I+GL NG REA E +++ +
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 13/296 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN+ +NT+I G ++ A+ L +M + +TY ++ G D A++
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDV----IACNSMIMGLAK 196
++K + D +I ++ G L EA+ ++ E ++ V + NS+I GL
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G++ ++++ F+ MA++ VT+N++ISG+ + + E +++F M EG FT
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF---- 308
+L++ +G L+ + ++ ++I ++ C G IE+A+ F
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 309 ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPD-RVSFIGVLTACKH 363
E G+ +N +I GL +A E F +L +KPD R I +L CK+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 23/326 (7%)
Query: 75 FTRMPSPNLYSWNTIIRGFS-----------RSSTPQFAISLFVDMLCSEVQPQKLTYPS 123
F R+ +PNL R FS S + A +LF +M+ S+ P + +
Sbjct: 17 FRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTR 76
Query: 124 VFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL- 182
+ A A L ++ G+ D + +IH + LS A V + ++L
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 183 ---DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEAL 235
++ S++ G +I ++ L M V +N++I G +NG L AL
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 236 EVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMY 295
E+ + M+++G+ T +LL + G + + + + +V+ TA+ID++
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 296 CKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDR 351
K G+++ A E+++ + + +NSII GL M+G +A + F + S P+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 352 VSFIGVLTACKHLGAIDEAKYYFSLM 377
V++ +++ +DE F M
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 37/229 (16%)
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
++ +I + R RL AL V M + G EPS T SLL+ + + + +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMNGHE 332
++ +E NV+V +ID CK G + A+E+ ++GL +N+++ GL +G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTC 392
+A + ++ PD V+F ++ G +DEA+ + M+ +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS------------ 275
Query: 393 MVEVLGQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRA 441
+++P+ T+ S+++ HG + AK+
Sbjct: 276 ---------------------SVDPNNVTYNSIINGLCMHGRLYDAKKT 303
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 172/368 (46%), Gaps = 20/368 (5%)
Query: 44 KTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTP 99
K G D + S V+ A + G ++ A +F M +P++ +N +I GF +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKA-GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 100 QFAISLFVDML-CSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNT 158
+ A+ L+ +L S V P T+ + ++ G D ++ R+ + EKD + ++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 159 IIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART 214
+IH ++G + +A+ VF+E K +DV+ N+M+ G +CGKI ES L+ M +
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 215 AV---TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEW 271
+V ++N +I G + NG++ EA ++ M +G + T ++ G +
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 272 VHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLA 327
V + + L+V +IID CK +E A + + + G+ N++I GL
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 328 MNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMV-NAYEIEPS 386
+ EA F ++ + +P VS+ ++ G EA + M+ N + +P
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW--KPD 533
Query: 387 IKHYTCMV 394
+K Y+ ++
Sbjct: 534 LKTYSILL 541
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 141/322 (43%), Gaps = 19/322 (5%)
Query: 50 DHIAASRVLTFCASSSGDINYAYMVFTRMPS-----PNLYSWNTIIRGFSRSSTPQFAIS 104
+ +A S + T+ +S D A VF RM P + S+NT++ F + S
Sbjct: 78 EDVALSVIKTYGKNSMPD--QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVES 135
Query: 105 LFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYA 164
LF + V P TY + K + + K G + D F +T+I+ A
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 165 NSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV---- 216
+G L +A +FDE E DV N +I G K + L++ + ++V
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 217 -TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
T N MISG + GR+ + L+++ M++ E +T SL++ G++ E V +
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIE---VFERNPRRGLSCWNSIIIGLAMNGHE 332
+ ++V+ ++ +C+CG I+ ++E + E + +N +I GL NG
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375
Query: 333 REAVEFFSKLQSSNLKPDRVSF 354
EA + + + D+ ++
Sbjct: 376 DEATMIWRLMPAKGYAADKTTY 397
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 15/331 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
S N+ S+N +I+G + A ++ M K TY G +
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLA 195
+ V G D + +II L EA + E VEL+ CN++I GL
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 196 KCGKIDES----RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
+ ++ E+ R + N T V++N +I G + G+ EA M E G +P
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 252 TMVSLLNACAHLGSLQHG-EWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF-- 308
T LL + E H +++ + E +V++ +I C G +++A+ V
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQ-SGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 309 --ERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGA 366
RN L +N+++ G G A + + L+PD +S+ ++
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 367 IDEAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
+ A +F N + I P++ + +V +
Sbjct: 655 VSYAMEFFDDARN-HGIFPTVYTWNILVRAV 684
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 16/343 (4%)
Query: 23 TMLQNHCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS-- 80
TML C K + + I +I + +L +G I+ A M++ MP+
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 81 --PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGA 138
+ ++ I G + A+ + ++ S Y S+ + + +
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 139 QLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGL 194
L + K G+E + + N +I L EA E V++ N +I GL
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 195 AKCGKIDES----RRLFNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
K GK E+ + + N T++ ++ G R+ ++ ALE++ + G+E
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 251 FTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFER 310
L++ +G L V + + N N++ +++ + K G A ++
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Query: 311 NPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKP 349
+ GL +N+I+ GL M A+EFF ++ + P
Sbjct: 630 MYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 164/377 (43%), Gaps = 20/377 (5%)
Query: 36 QQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNLYSWNTIIR 91
+++ A ++++GL+ D R L A GD+ VF+ M S P+L +++++
Sbjct: 325 KEVFAEMLRSGLSPDS-TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 92 GFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEK 151
F+RS A+ F + + + P + Y + + Y + G L +++ G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 152 DQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLF 207
D NTI+H +L EA ++F+E E D +I G K G + + LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 208 NNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHL 263
M + VT+N+++ G+ + G + A E++++M + + P+ + L+NA
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 264 GSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL--SC--W 319
G L V + N + V++ ++I YC+ G+ + E+ G C +
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 320 NSIIIGLAMNGHEREAVEFFSKLQSSN--LKPDRVSFIGVLTACKHLGAIDEAKYYFSLM 377
N++I G + +A K++ L PD ++ +L + EA+ M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 378 VNAYEIEPSIKHYTCMV 394
+ + P YTCM+
Sbjct: 684 IER-GVNPDRSTYTCMI 699
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 191/448 (42%), Gaps = 25/448 (5%)
Query: 48 AHDHIAASRVLTFCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAI 103
+ I L SS G + A+ + MP SP +Y++NT+I G + + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 104 SLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMY 163
+F +ML S + P TY S+ + G + ++ + + D ++++ ++
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 164 ANSGLLSEAKRVFDEKVELDVIACNS----MIMGLAKCGKIDESRRLFNNM----AARTA 215
SG L +A F+ E +I N +I G + G I + L N M A
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 216 VTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSY 275
VT+N+++ G + L EA ++F+ M E + P +T+ L++ LG+LQ+ +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 276 IRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGL----SCWNSIIIGLAMNGH 331
++ L+V+ ++D + K G I+ A E++ + + ++ ++ L GH
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 332 EREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
EA + ++ S N+KP + ++ G + + + M++ + P Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYN 624
Query: 392 CMVEVLGQXXXXXXXXXXIKGMT-----INPDASTWGSLLSSCRKHGNVEIAKRAAQKVC 446
++ + +K M + PD T+ S+L + ++ A+ +K+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 447 Q--LDPGDAGGYVLMSNVQAASNKFEEA 472
+ ++P D Y M N + + EA
Sbjct: 685 ERGVNP-DRSTYTCMINGFVSQDNLTEA 711
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 15/329 (4%)
Query: 82 NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLH 141
N+Y+ N ++ + + + + V P +TY ++ AY+ G + +L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKC 197
+ G + NT+I+ G AK VF E + D S++M K
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 198 GKIDESRRLFNNMAARTAVT----WNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
G + E+ ++F++M +R V ++SM+S + R+G L +AL F++++E G+ P
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
L+ G + + + + + ++V+ I+ CK + A ++F
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 314 RGLSCWNSIIIGLAMNGHER-----EAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
R L +S + + ++GH + A+E F K++ ++ D V++ +L +G ID
Sbjct: 474 RAL-FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMVEVL 397
AK ++ MV+ EI P+ Y+ +V L
Sbjct: 533 TAKEIWADMVSK-EILPTPISYSILVNAL 560
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 66 GDINYAYMVFTRMPSP----NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTY 121
G++ A +F +M ++ ++NT++ GF + A ++ DM+ E+ P ++Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 122 PSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAK----RVFD 177
+ A G + ++ ++ ++ I N++I Y SG S+ + ++
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 178 EKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTA------VTWNSMISGYVRNGRL 231
E D I+ N++I G + + ++ L M T+NS++ G+ R ++
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNF 281
KEA V M E GV P T ++N +L +H + + F
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 126/278 (45%), Gaps = 14/278 (5%)
Query: 174 RVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAART----AVTWNSMISGYVRNG 229
+V ++ V D++ N++I + G ++E+ L N M + T+N++I+G ++G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 230 RLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLT 289
+ + A EVF+ M G+ P T SLL G + E V S +R + +++ +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 290 AIIDMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHERE-----AVEFFSKLQS 344
+++ ++ + G+++ A+ F GL +++I + + G+ R+ A+ +++
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGL-IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 345 SNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVE---VLGQXX 401
D V++ +L + EA F+ M + P T +++ LG
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQ 497
Query: 402 XXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAK 439
+K I D T+ +LL K G+++ AK
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 127/289 (43%), Gaps = 18/289 (6%)
Query: 157 NTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV 216
+ +IH+ SG LS+A+ + G+++ ++ F+N + +V
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRS---------GVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 217 TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYI 276
++ +I YV+ +L+EA E F+ ++ +G S +L+ + +G ++ V+ I
Sbjct: 168 -FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 277 RRNNFELNVIVLTAIIDMYCKCGSIENA----IEVFERNPRRGLSCWNSIIIGLAMNGHE 332
R+ +NV L +++ CK G +E +V E+ + +N++I + G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 333 REAVEFFSKLQSSNLKPDRVSFIGVLTA-CKHLGAIDEAKYYFSLMVNAYEIEPSIKHYT 391
EA E + + P ++ V+ CKH G + AK F+ M+ + S + +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKH-GKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 392 CMVEVL--GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIA 438
++E G ++ + PD + S++S + GN++ A
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 146/327 (44%), Gaps = 16/327 (4%)
Query: 64 SSGDINYAYMVFTRMPS----PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKL 119
SSGD++ AY + M + PN+ + T+I+ F ++S A+ + +M + P
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 120 TYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK 179
Y S+ ++ + +V+ GL+ + F I Y + + A + E
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 180 VELDV----IACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRL 231
E V + C +I K GK+ E+ + +M + A T+ +++G +N ++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 232 KEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAI 291
+A E+F M+ +G+ P F+ L+N + LG++Q + + NVI+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 292 IDMYCKCGSIENAIEVFERNPRRGL----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNL 347
+ +C+ G IE A E+ + +GL + +II G +G EA F +++ L
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 348 KPDRVSFIGVLTACKHLGAIDEAKYYF 374
PD + ++ C L ++ A F
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 175/418 (41%), Gaps = 28/418 (6%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN +I + + A S + M+ + TY + + D ++
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAK 196
+ G+ D F +I+ ++ G + +A +FDE VE +VI N ++ G +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G+I++++ L + M+ + AVT+ ++I GY ++G L EA +F M+ +G+ P F
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEV----- 307
+L++ C L ++ + + + A+I+ K G E EV
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 308 ---FERNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
F+R + +N +I L G+ A E F ++Q++NL P +++ +L +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 365 GAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM--------TIN 416
G E F + A IEP Y+ ++ + + M
Sbjct: 854 GRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 417 PDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLD--PGDAGGYVLMSNVQAASNKFEEA 472
ST +LLS K G +E+A++ + + +L P A L++ +SN+ EA
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 151/373 (40%), Gaps = 16/373 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P ++ ++I G+ R + L V+M + TY +V K G +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAK 196
++ G + I T+I + + +A RV E E D+ NS+I+GL+K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
++DE+R M A T+ + ISGY+ A + M+E GV P++
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
L+N G + + + + T +++ K +++A E+F
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 313 RRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
+G++ + +I G + G+ ++A F ++ L P+ + + +L G I+
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMVEVL---GQXXXXXXXXXXIKGMTINPDASTWGSL 425
+AK M + + P+ Y +++ G +K + PD+ + +L
Sbjct: 680 KAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 426 LSSCRKHGNVEIA 438
+ C + +VE A
Sbjct: 739 VDGCCRLNDVERA 751
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 153/372 (41%), Gaps = 16/372 (4%)
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
Y ++ I S+ + A +LF M+ S + PQ Y S+ + Y + G +L
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV----ELDVIACNSMIMGLAKCGK 199
+ K + + T++ +SG L A + E + +V+ ++I + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 200 IDESRRLFNNMA----ARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
++ R+ M A +NS+I G + R+ EA M E G++P+ FT +
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
++ + +R N ++ T +I+ YCK G + A + +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 316 L----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
+ + ++ GL N +A E F +++ + PD S+ ++ LG + +A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 372 YYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTI---NPDASTWGSLLSS 428
F MV + P++ Y ++ + + M++ +P+A T+ +++
Sbjct: 648 SIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 429 CRKHGNVEIAKR 440
K G++ A R
Sbjct: 707 YCKSGDLAEAFR 718
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 147/370 (39%), Gaps = 28/370 (7%)
Query: 16 ISDQPCLTMLQNHC---TTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAY 72
+ D T+L N + D ++I + G+A D + + VL S G++ A
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD-VFSYGVLINGFSKLGNMQKAS 647
Query: 73 MVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAY 128
+F M +PN+ +N ++ GF RS + A L +M + P +TY ++ Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 129 AQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVF---DEKVELDVI 185
+ G + +L + GL D F+ T++ + A +F +
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 186 ACNSMIMGLAKCGKIDESRRLFNNM--------AARTAVTWNSMISGYVRNGRLKEALEV 237
N++I + K GK + + N + VT+N MI + G L+ A E+
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 238 FSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCK 297
F MQ + P+ T SLLN +G V E + I+ + II+ + K
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 298 CGSIENAI----EVFERNP-----RRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
G A+ ++F +N + +S +++ G A G A + +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 349 PDRVSFIGVL 358
PD + I ++
Sbjct: 948 PDSATVIELI 957
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 160/397 (40%), Gaps = 24/397 (6%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ L M+C + P K TY + ++ D L + LG+ D + +I
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 162 MYANSGLLSEAKRVFDEKVE----LDVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
AK + E V + + I ++K G +++++ LF+ M A
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
A + S+I GY R +++ E+ M++ + S +T +++ G L +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMN 329
+ + NV++ T +I + + +A+ V + +G++ C+NS+IIGL+
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
EA F ++ + LKP+ ++ ++ A Y M + P+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPNKVL 559
Query: 390 YTCMVEVLGQXXXXXXXXXXIKGMT---INPDASTWGSLLSSCRKHGNV----EIAKRAA 442
T ++ + + M I DA T+ L++ K+ V EI +
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 443 QKVCQLDPGDAG----GYVLMSNVQAASNKFEEAMEQ 475
K D G G+ + N+Q AS+ F+E +E+
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 164/367 (44%), Gaps = 17/367 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P L + N ++ SS P A M+ +P +T+ S+ Y D L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAK 196
+++ +G + + T+I + L+ A +F++ +V+ N+++ GL +
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
G+ ++ L +M R +T+ ++I +V+ G+L EA E+++ M + V P FT
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
SL+N G L + + RN N ++ T +I +CK +E+ +++F
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 313 RRGLSC----WNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
++G+ + +I G + G A E F+++ S PD ++ +L G ++
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 369 EAKYYFSLMVNAYEIEPSIKHYTCMVE---VLGQXXXXXXXXXXIKGMTINPDASTWGSL 425
+A F M E++ +I YT +++ LG+ + + P+ T+ ++
Sbjct: 416 KALMIFEYM-RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 426 LSS-CRK 431
+S CR+
Sbjct: 475 ISGFCRR 481
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 150/374 (40%), Gaps = 87/374 (23%)
Query: 28 HCTTMKDFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNL 83
H ++D + I+ G + + L C + +N+A +F +M + PN+
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPN-VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 84 YSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
++N ++ G A L DM+ ++P +T+ ++ A+ ++G + +L+
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVF------------------------DEK 179
++++ + D F ++I+ GLL EA+++F ++
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 180 VE---------------LDVIACNSMIMGLAKCGKIDESRRLFNNMAARTAV----TWNS 220
VE + I +I G G+ D ++ +FN M++R A T+N
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 221 MISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
++ G NG++++AL +F Y+R+
Sbjct: 404 LLDGLCCNGKVEKALMIF-----------------------------------EYMRKRE 428
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAV 336
++N++ T II CK G +E+A ++F +G+ + ++I G G EA
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 337 EFFSKLQSSNLKPD 350
F K++ P+
Sbjct: 489 SLFKKMKEDGFLPN 502
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN + T+I GF +S + + +F +M V +TY + + Y +G ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFD----EKVELDVIACNSMIMGLAK 196
++ D N ++ +G + +A +F+ +++++++ +I G+ K
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 197 CGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSE 250
GK++++ LF ++ ++ +T+ +MISG+ R G + EA +F M+E+G P+E
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 179/428 (41%), Gaps = 27/428 (6%)
Query: 40 AHIIKTGLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMP----SPNLYSWNTIIRGFS 94
IIK G D + S ++ C G ++ A + RM P L + N ++ G
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLE--GRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 95 RSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQF 154
+ A+ L M+ + QP ++TY V K + G +L ++ + ++ D
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 155 ISNTIIHMYANSGLLSEAKRVFDEK----VELDVIACNSMIMGLAKCGKIDESRRLFNNM 210
+ II G L A +F+E + D+I ++I G G+ D+ +L +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 211 AART----AVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
R V ++++I +V+ G+L+EA E+ M + G+ P T SL++ L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSI 322
+ + N+ +I+ YCK I++ +E+F + RG+ +N++
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 323 IIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYE 382
I G G A E F ++ S ++PD VS+ +L G ++A F + +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE-KIEKSK 487
Query: 383 IEPSIKHYTCMVEVLGQXXXXXXX-----XXXIKGMTINPDASTWGSLLSSCRKHGNVEI 437
+E I Y ++ + +KG + PD T+ ++ K G++
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG--VKPDVKTYNIMIGGLCKKGSLSE 545
Query: 438 AKRAAQKV 445
A +K+
Sbjct: 546 ADLLFRKM 553
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 18/323 (5%)
Query: 65 SGDINYAYMVFTRMP----SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
G ++ A+ +F M ++ + T+IRGF + L DM+ ++ P +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
+ ++ + + G + +LH +++ G+ D ++I + L +A + D V
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 181 EL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLK 232
++ N +I G K ID+ LF M+ R VT+N++I G+ G+L+
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
A E+F M V P + LL+ G + + I ++ EL++ + II
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 293 DMYCKCGSIENAIEVFERNPRRG----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLK 348
C +++A ++F P +G + +N +I GL G EA F K++
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 349 PDRVSFIGVLTACKHLGAIDEAK 371
P+ ++ ++ A HLG D K
Sbjct: 560 PNGCTYNILIRA--HLGEGDATK 580
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 32 MKDFQQIHAHIIKTGLAHDHIAASRVLT-FCASSSGD-INYAY-MVFTRMPSPNLYSWNT 88
+++ +++H +I+ G++ D + + ++ FC + D N+ ++ ++ PN+ ++N
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 89 IIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLG 148
+I G+ +++ + LF M V +TY ++ + + +LG +L +V
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 149 LEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAKCGKIDESR 204
+ D ++ ++G +A +F++ K+ELD+ N +I G+ K+D++
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 205 RLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNAC 260
LF ++ + T+N MI G + G L EA +F M+E+G P+ T L+ A
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 261 AHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDM 294
G + I+R F ++ + ++DM
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 131/306 (42%), Gaps = 13/306 (4%)
Query: 102 AISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIH 161
A+ LF +M S +P+ + + +F A+ L ++ G+ + + + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 162 MYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAKCGKIDESRRLFNNMAAR---- 213
LS A + ++L D + +++I GL G++ E+ L + M
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 214 TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVH 273
T +T N++++G NG++ +A+ + M E G +P+E T +L G +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 274 SYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMN 329
+ +L+ + + IID CK GS++NA +F +G + ++I G
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 330 GHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKH 389
G + + + + PD V+F ++ G + EA+ M+ I P
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVT 354
Query: 390 YTCMVE 395
YT +++
Sbjct: 355 YTSLID 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 128/315 (40%), Gaps = 15/315 (4%)
Query: 23 TMLQNHCTTMK--DFQQIHAHIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMP- 79
T+++ C + D ++ +IK + D +A S L C G + A + M
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS-ALIDCFVKEGKLREAEELHKEMIQ 345
Query: 80 ---SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
SP+ ++ ++I GF + + A + M+ P T+ + Y + D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIM 192
G +L ++ G+ D NT+I + G L AK +F E +V D+++ ++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 193 GLAKCGKIDESRRLFNNMAARTAV----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
GL G+ +++ +F + +N +I G ++ +A ++F ++ +GV+P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
T ++ GSL + + + + N +I + G + ++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 309 ERNPRRGLSCWNSII 323
E R G S S +
Sbjct: 586 EEIKRCGFSVDASTV 600
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 158/330 (47%), Gaps = 14/330 (4%)
Query: 83 LYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDG-AQLH 141
+Y+++ +I + RS + AIS+F M ++P +TY +V A + G A+
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 142 GRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAKC 197
+ + G++ D+ N+++ + + GL A+ +FDE ++E DV + N+++ + K
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 198 GKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTM 253
G++D + + M + V+++++I G+ + GR EAL +F M+ G+ +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
+LL+ +G + + + + +V+ A++ Y K G + +VF R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 314 R----GLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
L ++++I G + G +EA+E F + +S+ L+ D V + ++ A G +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQ 399
A M I P++ Y +++ G+
Sbjct: 568 AVSLIDEMTKE-GISPNVVTYNSIIDAFGR 596
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 34 DFQQIHA---HIIKTGLAHDHIAASRVLTFCASSSGDINYAYMVFTRMPS----PNLYSW 86
+F+Q+ + + G+ D I + +L C S G A +F M + +++S+
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVC-SRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 87 NTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVK 146
NT++ + A + M + P ++Y +V +A+ G + L G +
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 147 LGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRL 206
LG+ D+ NT++ +Y G EA LD++ R +
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEA---------LDIL------------------REM 470
Query: 207 FNNMAARTAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSL 266
+ + VT+N+++ GY + G+ E +VF+ M+ E V P+ T +L++ + G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 267 QHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLS----CWNSI 322
+ + + +V++ +A+ID CK G + +A+ + + + G+S +NSI
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 323 I 323
I
Sbjct: 591 I 591
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 13/266 (4%)
Query: 187 CNSMIMGLAKCGKIDESRRLFNNMAA----RTAVTWNSMISGYVRNGRLKEALEVFSNMQ 242
++MI L + GK+ ++R+F A T ++++IS Y R+G +EA+ VF++M+
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 243 EEGVEPSEFTMVSLLNACAHLG-SLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSI 301
E G+ P+ T ++++AC G + ++RN + + I +++ + + G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 302 ENAIEVFE----RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGV 357
E A +F+ R + + +N+++ + G A E +++ + P+ VS+ V
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 358 LTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV---LGQXXXXXXXXXXIKGMT 414
+ G DEA F M I Y ++ + +G+ + +
Sbjct: 416 IDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 415 INPDASTWGSLLSSCRKHGNVEIAKR 440
I D T+ +LL K G + K+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKK 500
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 187/452 (41%), Gaps = 57/452 (12%)
Query: 46 GLAHDHIAASRVLT-FCASSSGDINYAYMVFTRMPSPNLYSWNTIIRGFSRSSTPQFAIS 104
G A D I ++ C G ++ A +F R+P P + +NT+I GF A +
Sbjct: 317 GFAPDDITYGYLMNGLC--KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 105 LFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMY 163
+ DM+ S + P TY S+ Y + G +V L LE ++H
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEG-----------LVGLALE--------VLHDM 415
Query: 164 ANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWN 219
N G + +V + ++ G K GKIDE+ + N M+A V +N
Sbjct: 416 RNKG------------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 220 SMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRN 279
+IS + + R+ EA+E+F M +G +P +T SL++ + ++H W+ +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 280 NFELNVIVLTAIIDMYCKCGSIENAIE-----VFERNPRRGLSCWNSIIIGLAMNGHERE 334
N + +I+ + + G I+ A + VF+ +P ++ +NS+I GL G +
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT-YNSLIKGLCRAGEVDK 582
Query: 335 AVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMV 394
A F K+ P +S ++ G ++EA + MV P I + ++
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LRGSTPDIVTFNSLI 641
Query: 395 EVL---GQXXXXXXXXXXIKGMTINPDASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPG 451
L G+ ++ I PD T+ +L+S K G V A LD G
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA------CLLLDEG 695
Query: 452 DAGGYVLMSNVQAASNKFEEAMEQRILMKENF 483
G+V N + S + + Q L + F
Sbjct: 696 IEDGFV--PNHRTWSILLQSIIPQETLDRRRF 725
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 141/307 (45%), Gaps = 9/307 (2%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
PN + T+I S+ + A+ L +M P T+ V + ++ A++
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELDVIACNSMIMGLAKCGKI 200
R++ G D +++ G + AK +F + +++ N++I G G++
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 201 DESRRLFNNMAARTAV-----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFTMVS 255
D+++ + ++M + T+NS+I GY + G + ALEV +M+ +G +P+ ++
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 256 LLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRG 315
L++ LG + V + + + + N + +I +CK I A+E+F PR+G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 316 ----LSCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAK 371
+ +NS+I GL + A+ + S + + V++ ++ A G I EA+
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 372 YYFSLMV 378
+ MV
Sbjct: 550 KLVNEMV 556
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 176/444 (39%), Gaps = 53/444 (11%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P S+N ++ + + A ++F DML ++ P T+ V KA+ + L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVEL----DVIACNSMIMGLAK 196
+ K G + I T+IH + ++EA ++ +E + D N +I+GL K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 197 CGKIDESRRLFNNMAAR-----------------------------------TAVTWNSM 221
+I+E+ ++ N M R V +N++
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 222 ISGYVRNGRLKEALEVFSNM-QEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNN 280
I G+V +GRL +A V S+M G+ P T SL+ G + V +R
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 281 FELNVIVLTAIIDMYCKCGSIENAIEVFERNPRRGLSC----WNSIIIGLAMNGHEREAV 336
+ NV T ++D +CK G I+ A V GL +N +I EAV
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 337 EFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEV 396
E F ++ KPD +F +++ + I A + M++ + ++ Y ++
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT-YNTLINA 538
Query: 397 LGQXXXXXXXXXXIKGMTI--NP-DASTWGSLLSSCRKHGNVEIAKRAAQKVCQLDPGDA 453
+ + M +P D T+ SL+ + G V+ A+ +K+ L G A
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM--LRDGHA 596
Query: 454 GGYV---LMSNVQAASNKFEEAME 474
+ ++ N S EEA+E
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVE 620
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 167/365 (45%), Gaps = 16/365 (4%)
Query: 77 RMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHD 136
++ +P+ ++ ++I G + A ++ ML S+ + + Y S+ K + G D
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 137 GAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIM 192
G +++ ++ D + NT + +G + + +F+E + D + + +I
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 193 GLAKCGKIDESRRLFNNMAARTAV----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEP 248
GL K G +E+ LF +M + V +N +I G+ + G++ +A ++ M+ +G EP
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 249 SEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVF 308
+ T S+++ A + L + + ELNV++ +++ID + K G I+ A +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 309 ERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHL 364
E ++GL+ WNS++ L EA+ F ++ P++V++ ++ +
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 365 GAIDEAKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDAST 421
++A ++ M ++PS YT M+ L + N PD++
Sbjct: 741 RKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 422 WGSLL 426
+ +++
Sbjct: 800 YNAMI 804
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 13/312 (4%)
Query: 81 PNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQL 140
P ++ T+I FS + ++LF M +P + ++ + +A+ G L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 141 HGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLAK 196
+ L+ D + N I + G + A + F E ++ D + SMI L K
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 197 CGKIDESRRLFNNMAARTAV----TWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEFT 252
++DE+ +F ++ V +N+MI GY G+ EA + + +G PS
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 253 MVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNP 312
+L +G + V ++++ N+ +IDM C+ G ++ A E+ +
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 313 RRGL----SCWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAID 368
+ GL N ++ L + EA F ++ PD ++F ++ +G +D
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 369 EAKYYFSLMVNA 380
+A + M+++
Sbjct: 465 DAYKVYEKMLDS 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 15/327 (4%)
Query: 80 SPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGAGHDGAQ 139
SP+L NT + ++ P+ ++F ++ P +Y + + G ++ +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 140 LHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDE----KVELDVIACNSMIMGLA 195
L + + G D N +I + G +++A ++ +E E V+ S+I GLA
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 196 KCGKIDESRRLFNNMAAR----TAVTWNSMISGYVRNGRLKEALEVFSNMQEEGVEPSEF 251
K ++DE+ LF ++ V ++S+I G+ + GR+ EA + + ++G+ P+ +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 252 TMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERN 311
T SLL+A + ++ N + +I+ CK A ++
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 312 PRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAI 367
++G+ + ++I GLA G+ EA F + +++ PD + ++ L
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG---LSNG 810
Query: 368 DEAKYYFSLMVNAYEIEPSIKHYTCMV 394
+ A FSL I + TC+V
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVV 837
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 121/285 (42%), Gaps = 12/285 (4%)
Query: 65 SGDINYAYMVFTRMPSP----NLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLT 120
+G N Y +F M + ++N +I GF + A L +M +P +T
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 121 YPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKV 180
Y SV A++ + L +E + I +++I + G + EA + +E +
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 181 EL----DVIACNSMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLK 232
+ ++ NS++ L K +I+E+ F +M VT+ +I+G + +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 233 EALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAII 292
+A + MQ++G++PS + ++++ A G++ + + N + A+I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 293 DMYCKCGSIENAIEVFERNPRRGLSCWNSIIIGLAMNGHEREAVE 337
+ +A +FE RRGL N + L H+ + +E
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLE 849
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 21/339 (6%)
Query: 115 QPQKLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKR 174
+P Y ++ A++ + L ++ +LG E + T+I +A G + A
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 175 VFDE----KVELDVIACNSMIMGLAKCGKIDESRRLFNNMAAR----TAVTWNSMISGYV 226
+ DE ++ D++ N I K GK+D + + F+ + A VT+ SMI
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 227 RNGRLKEALEVFSNMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVI 286
+ RL EA+E+F ++++ P + +++ G + R +VI
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 287 VLTAIIDMYCKCGSIENAIEVFE---RNPRRGLSCWNSIIIGLAMNGHEREAVEFFSKLQ 343
I+ K G ++ A++VFE ++ LS +N +I L G A E +Q
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 344 SSNLKPD-RVSFIGVLTACKHLGAIDEAKYYFSLMVNAYEI-EPSIKHYTCMVEVLGQXX 401
+ L P+ R I V CK +DEA F M Y++ P + +++ LG+
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKS-QKLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVG 461
Query: 402 XXXXXXXXIKGMTINPDAST----WGSLLSSCRKHGNVE 436
+ M ++ D T + SL+ + HG E
Sbjct: 462 RVDDAYKVYEKM-LDSDCRTNSIVYTSLIKNFFNHGRKE 499
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 15/267 (5%)
Query: 184 VIACNSMIMGLAKCGKIDESRRLFNNMAA---RTAVT-WNSMISGYVRNGRLKEALEVFS 239
V C M++G K K+ E + M R A + + ++I + L +F
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 240 NMQEEGVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCG 299
MQE G EP+ +L+ A G + + ++ ++ + ++++ ID + K G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 300 SIENAIEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFI 355
++ A + F GL + S+I L EAVE F L+ + P ++
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 356 GVLTACKHLGAIDEAKYYFSLM--VNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGM 413
++ G DEA +SL+ A PS+ Y C++ L + + M
Sbjct: 313 TMIMGYGSAGKFDEA---YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 414 TIN--PDASTWGSLLSSCRKHGNVEIA 438
+ P+ ST+ L+ + G ++ A
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTA 396
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%), Gaps = 16/312 (5%)
Query: 74 VFTRMPSPNLYSWNTIIRGFSRSSTPQFAISLFVDMLCSEVQPQKLTYPSVFKAYAQLGA 133
+ TR SPN ++NT+I + + + A L + + P T+ S+ +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 134 GHDGAQLHGRVVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD-----VIACN 188
+L + G E D+F N +I + G L EA + +++EL VI N
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML-KQMELSGCARSVITYN 474
Query: 189 SMIMGLAKCGKIDESRRLFNNM----AARTAVTWNSMISGYVRNGRLKEALEVFSNMQEE 244
++I G K K E+ +F+ M +R +VT+N++I G ++ R+++A ++ M E
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 245 GVEPSEFTMVSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENA 304
G +P ++T SLL G ++ + + N E +++ +I CK G +E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 305 IEVFERNPRRGLS----CWNSIIIGLAMNGHEREAVEFFSK-LQSSNLKPDRVSFIGVLT 359
++ +G++ +N +I GL EA+ F + L+ + PD VS+ V
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 360 A-CKHLGAIDEA 370
C G I EA
Sbjct: 655 GLCNGGGPIREA 666
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 160/379 (42%), Gaps = 56/379 (14%)
Query: 85 SWNTIIRGFSRSSTPQFAISLFVDMLCSE-VQPQKLTYPSVFKAYAQLGAGHDGAQLHGR 143
S N I+ GF + + A++ +M + P + T+ ++ + G ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 144 VVKLGLEKDQFISNTIIHMYANSGLLSEAKRVFDEKVELD----VIACNSMIMGLAKCGK 199
+++ G + D + N++I G + EA V D+ + D + N++I L K +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 200 IDESRRLFNNMAAR----TAVTWNSMISGY--VRNGRLKEALEVFSNMQEEGVEPSEFTM 253
++E+ L + ++ T+NS+I G RN R+ A+E+F M+ +G EP EFT
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTY 438
Query: 254 VSLLNACAHLGSLQHGEWVHSYIRRNNFELNVIVLTAIIDMYCKCGSIENAIEVFERNPR 313
L+++ G L + + + +VI +ID +CK A E+F+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 314 RGLS----CWNSIIIGLAMNGHEREAVEFFSKLQSSNLKPDRVSFIGVLTACKHLGAIDE 369
G+S +N++I GL + +A + ++ KPD+ ++ +LT G I +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 370 AKYYFSLMVNAYEIEPSIKHYTCMVEVLGQXXXXXXXXXXIKGMTIN---PDASTWGSLL 426
A ++ MT N PD T+G+L+
Sbjct: 559 A------------------------------------ADIVQAMTSNGCEPDIVTYGTLI 582
Query: 427 SSCRKHGNVEIAKRAAQKV 445
S K G VE+A + + +
Sbjct: 583 SGLCKAGRVEVASKLLRSI 601