Miyakogusa Predicted Gene
- Lj2g3v3088170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3088170.1 tr|B9FMK1|B9FMK1_ORYSJ Tubulin gamma chain
OS=Oryza sativa subsp. japonica GN=OsJ_17184 PE=3
SV=1,97.01,0,TUBULIN,Tubulin; GAMMATUBULIN,Gamma tubulin; no
description,Tubulin/FtsZ, GTPase domain; TUBULIN GAM,CUFF.39846.1
(144 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin comp... 266 4e-72
AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin | chr3:22812601-228... 264 2e-71
AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:178594... 115 7e-27
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:111822... 115 7e-27
AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:126442... 110 3e-25
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:284513... 110 3e-25
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:693803... 110 3e-25
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:251845... 110 4e-25
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:251815... 110 4e-25
AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044... 109 7e-25
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044... 109 7e-25
AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962... 109 8e-25
AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-668... 87 4e-18
AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 | chr5:6682761-668... 87 4e-18
AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4... 87 6e-18
AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain | chr1:18517... 86 9e-18
AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain | chr1... 86 9e-18
AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin | chr1:24050114-24... 82 1e-16
AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4... 81 2e-16
>AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex
protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474
Length = 474
Score = 266 bits (679), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/134 (96%), Positives = 132/134 (98%)
Query: 1 MGSYLLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNT 60
MGSYLLETL+DRYSKKLVQTYSVFPNQMETSDVVVQP NSLLTLKRLTLNADCVVV+DNT
Sbjct: 149 MGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT 208
Query: 61 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 120
ALNRIAVERLHL+NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 121 LMTGYTPLTVERQV 134
LMTGYTPLTVERQ
Sbjct: 269 LMTGYTPLTVERQA 282
>AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin |
chr3:22812601-22815011 REVERSE LENGTH=474
Length = 474
Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/134 (95%), Positives = 131/134 (97%)
Query: 1 MGSYLLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNT 60
MGSYLLETL+DRYSKKLVQTYSVFPNQMETSDVVVQP NSLLTLKRLTLNADCVVV+DNT
Sbjct: 149 MGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT 208
Query: 61 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 120
AL RIAVERLHL+NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 121 LMTGYTPLTVERQV 134
LMTGYTPLTVERQ
Sbjct: 269 LMTGYTPLTVERQA 282
>AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 |
chr5:17859442-17860994 REVERSE LENGTH=444
Length = 444
Score = 115 bits (289), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLT 129
+ PLT
Sbjct: 270 FAPLT 274
>AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain |
chr4:11182218-11183840 FORWARD LENGTH=444
Length = 444
Score = 115 bits (289), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLT 129
+ PLT
Sbjct: 270 FAPLT 274
>AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain |
chr2:12644258-12645932 REVERSE LENGTH=449
Length = 449
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L LS P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q R+L
Sbjct: 270 FAPLTSRGSQQYRNL 284
>AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain |
chr1:28451378-28453602 REVERSE LENGTH=447
Length = 447
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L LS P+F N L+S MS T +LR+PG +N+DL L +LIP PR HF M G
Sbjct: 211 ICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 270
Query: 125 YTPLT 129
+ PLT
Sbjct: 271 FAPLT 275
>AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain |
chr1:6938033-6940481 REVERSE LENGTH=449
Length = 449
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L LS P+F N L+S MS T +LR+PG +N+DL L +LIP PR HF M G
Sbjct: 211 ICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 270
Query: 125 YTPLT 129
+ PLT
Sbjct: 271 FAPLT 275
>AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 |
chr5:25184501-25186426 FORWARD LENGTH=450
Length = 450
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q RSL
Sbjct: 270 FAPLTSRGSQQYRSL 284
>AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 |
chr5:25181560-25183501 FORWARD LENGTH=450
Length = 450
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q RSL
Sbjct: 270 FAPLTSRGSQQYRSL 284
>AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528
FORWARD LENGTH=449
Length = 449
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q R+L
Sbjct: 270 FAPLTSRGSQQYRAL 284
>AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528
FORWARD LENGTH=449
Length = 449
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q R+L
Sbjct: 270 FAPLTSRGSQQYRAL 284
>AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971
REVERSE LENGTH=449
Length = 449
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 5 LLETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNR 64
L+ + + Y +++ T+SVFP+ + SD VV+P N+ L++ +L NAD +V+DN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 65 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 124
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 125 YTPLTVE--RQVRSL 137
+ PLT +Q R+L
Sbjct: 270 FAPLTSRGSQQYRAL 284
>AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 |
chr5:6687212-6688926 FORWARD LENGTH=450
Length = 450
Score = 87.0 bits (214), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 7 ETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRIA 66
E L Y KK ++++P+ + S VV+P NS+L+ L + D V++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 67 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 126
L + PT+ N L+S ++S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 127 PL 128
P+
Sbjct: 274 PV 275
>AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 |
chr5:6682761-6684474 REVERSE LENGTH=450
Length = 450
Score = 87.0 bits (214), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 7 ETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRIA 66
E L Y KK ++++P+ + S VV+P NS+L+ L + D V++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 67 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 126
L + PT+ N L+S ++S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 127 PL 128
P+
Sbjct: 274 PV 275
>AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein |
chr4:8548769-8550319 REVERSE LENGTH=450
Length = 450
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 7 ETLDDRYSKKLVQTYSVFPN-QMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRI 65
E L Y KK ++V+P+ Q+ TS VV+P NS+L+ L + D +++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 66 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 125
L++ PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 126 TPL 128
P+
Sbjct: 273 APV 275
>AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain |
chr1:18517737-18519729 FORWARD LENGTH=450
Length = 450
Score = 85.9 bits (211), Expect = 9e-18, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 7 ETLDDRYSKKLVQTYSVFPN-QMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRI 65
E L Y KK ++V+P+ Q+ TS VV+P NS+L+ L + D +++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 66 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 125
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 126 TPL 128
P+
Sbjct: 273 APV 275
>AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain |
chr1:1356421-1358266 REVERSE LENGTH=450
Length = 450
Score = 85.9 bits (211), Expect = 9e-18, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 7 ETLDDRYSKKLVQTYSVFPN-QMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRI 65
E L Y KK ++V+P+ Q+ TS VV+P NS+L+ L + D +++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 66 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 125
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 126 TPL 128
P+
Sbjct: 273 APV 275
>AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin |
chr1:24050114-24052296 FORWARD LENGTH=450
Length = 450
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 7 ETLDDRYSKKLVQTYSVFPNQMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRIA 66
E L + KK ++++P+ + S VV+P NS+L+ L + D VV++DN A+ I
Sbjct: 155 ERLSVDFGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDIC 213
Query: 67 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 126
L + PT++ N L+S +S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 127 PL 128
P+
Sbjct: 274 PV 275
>AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein |
chr4:8548753-8550319 REVERSE LENGTH=427
Length = 427
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 7 ETLDDRYSKKLVQTYSVFPN-QMETSDVVVQPSNSLLTLKRLTLNADCVVVIDNTALNRI 65
E L Y KK ++V+P+ Q+ TS VV+P NS+L+ L + D +++DN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 66 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 125
L++ PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 126 TPL 128
P+
Sbjct: 273 APV 275