Miyakogusa Predicted Gene

Lj2g3v3085360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3085360.1 Non Chatacterized Hit- tr|I1M6Z3|I1M6Z3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6882
PE=,90.96,0,Nol1_Nop2_Fmu,Bacterial Fmu (Sun)/eukaryotic nucleolar
NOL1/Nop2p; NOL1_NOP2_SUN,Bacterial Fmu (Sun),CUFF.39691.1
         (192 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06560.1 | Symbols:  | NOL1/NOP2/sun family protein | chr1:20...   292   8e-80
AT3G13180.1 | Symbols:  | NOL1/NOP2/sun family protein / antiter...    66   2e-11
AT4G26600.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    65   4e-11
AT5G55920.1 | Symbols: OLI2 | S-adenosyl-L-methionine-dependent ...    63   1e-10

>AT1G06560.1 | Symbols:  | NOL1/NOP2/sun family protein |
           chr1:2007660-2011824 FORWARD LENGTH=599
          Length = 599

 Score =  292 bits (748), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 139/189 (73%), Positives = 158/189 (83%)

Query: 3   DNGEKANGRAYQSKADIRKNMRRARNGPGRNQSVGGQVDSSKGFSPGSFDRVLLDAPCSA 62
           D+ E+ NG    S+A IRKN  R +NG GR Q  GG+   S+GF P SFDRVLLDAPCSA
Sbjct: 411 DSTEQPNGGDNVSQAYIRKNKGRLKNGRGRTQCQGGRAGKSQGFPPNSFDRVLLDAPCSA 470

Query: 63  LGLRPRLFAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTCTINPGENEALVRYA 122
           LGLRPRLFAG ET+ SLR+H  YQRKM DQAVQL R GG++VYSTCTINP ENEA+VRYA
Sbjct: 471 LGLRPRLFAGLETVVSLRNHGWYQRKMLDQAVQLVRVGGILVYSTCTINPSENEAVVRYA 530

Query: 123 LDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGEEDLVQRFDPSSPLDTIGFFI 182
           LDKY++LSLAPQHPRIGGPGLVG  EFPDGY++EWL+PGEE+LVQ+FDPSS LDTIGFFI
Sbjct: 531 LDKYRFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFI 590

Query: 183 AKFAVGSKD 191
           AKF+VG KD
Sbjct: 591 AKFSVGPKD 599


>AT3G13180.1 | Symbols:  | NOL1/NOP2/sun family protein /
           antitermination NusB domain-containing protein |
           chr3:4236326-4239966 REVERSE LENGTH=523
          Length = 523

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 51  FDRVLLDAPCSALGLRPRL--FAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTC 108
           +D+VLLDAPCS LG+  +         +E +    K Q ++ D A +L + GGV+VYSTC
Sbjct: 402 YDKVLLDAPCSGLGVLSKRADLRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTC 461

Query: 109 TINPGENEALVRYALDKYKYLSLAP 133
           +I+P ENE  V   L ++   ++ P
Sbjct: 462 SIDPEENEGRVEAFLLRHPEFTIDP 486


>AT4G26600.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:13419629-13423418 FORWARD LENGTH=671
          Length = 671

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 16/149 (10%)

Query: 43  SKGFSPGSFDRVLLDAPCSALGL--RPRLFAGEETIESLRSHAKYQRKMFDQAVQL---- 96
           +K     S DRVLLDAPCS  G+  +       ++ + ++  A  Q+++   A+ L    
Sbjct: 406 TKVLGQSSVDRVLLDAPCSGTGVISKDESVKTSKSADDIKKFAHLQKQLILGAIDLVDAN 465

Query: 97  ARPGGVIVYSTCTINPGENEALVRYALDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDE 156
           ++ GG IVYSTC++   ENEA++ YAL K + + L P     G PG          + + 
Sbjct: 466 SKTGGYIVYSTCSVMIPENEAVIDYAL-KNRDVKLVPCGLDFGRPGF-------SSFREH 517

Query: 157 WLRPGEEDLVQRFDPSSPLDTIGFFIAKF 185
              P  E   +RF P    +  GFF+AK 
Sbjct: 518 RFHPSLEK-TRRFYPHV-HNMDGFFVAKL 544


>AT5G55920.1 | Symbols: OLI2 | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:22645742-22649383 REVERSE LENGTH=682
          Length = 682

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 44  KGFSPGSFDRVLLDAPCSALGL--RPRLFAGEETIESLRSHAKYQRKMFDQAVQL----A 97
           K     + DRVLLDAPCS  G+  +       +T++ ++  A  Q+++   A+ +    +
Sbjct: 424 KVLGQNTVDRVLLDAPCSGTGIISKDESVKITKTMDEIKKFAHLQKQLLLAAIDMVDANS 483

Query: 98  RPGGVIVYSTCTINPGENEALVRYALDK 125
           + GG IVYSTC+I   ENEA++ YAL K
Sbjct: 484 KTGGYIVYSTCSIMVTENEAVIDYALKK 511