Miyakogusa Predicted Gene

Lj2g3v3084350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3084350.2 Non Chatacterized Hit- tr|A5C0V1|A5C0V1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.23,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Apc5,Anaphase-promoting complex subunit 5,CUFF.39690.2
         (570 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to...   594   e-170

>AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to
           268 proteins in 109 species: Archae - 0; Bacteria - 0;
           Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0;
           Other Eukaryotes - 13 (source: NCBI BLink). |
           chr1:2016504-2024505 REVERSE LENGTH=916
          Length = 916

 Score =  594 bits (1531), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 319/575 (55%), Positives = 393/575 (68%), Gaps = 23/575 (4%)

Query: 1   MAGILKQPGAFAVTPHKVSLCILLKIYXXXXXXXXXXXXXXXXXXXXXXXXXXHHNRLAL 60
           MAG+ +  GAFAVTPHK+S+CILL+IY                           HNRL L
Sbjct: 1   MAGLTRTAGAFAVTPHKISVCILLQIYAPSAQMSLPFPFSSVA----------QHNRLGL 50

Query: 61  FLLALTKSCDDILEPRLDELIHQLRIVSQNWEAASWVIDQLMXXXXXXXXXXXXXXXXXX 120
           +LL+LTKSCDDI EP+L++LI+QLR V +  +A  W+ D L                   
Sbjct: 51  YLLSLTKSCDDIFEPKLEKLINQLREVGEEMDA--WLTDHLTNRFSSLASPDDLLNFFND 108

Query: 121 IRGILGGPDSGAVEDDQAILDMNSNLGLFLRRCILAFNLLSFEGICYLLTSIGIYTKEFS 180
           +RGILG  DSG V+DDQ ILD NSNLG+F+RRCILAFNLLSFEG+C+L +SI  Y KE  
Sbjct: 109 MRGILGSLDSGVVQDDQIILDPNSNLGMFVRRCILAFNLLSFEGVCHLFSSIEDYCKEAH 168

Query: 181 NCPPYEERSLDDSSSNLETYSEYENMDLENFVYEKVSEEIEARKEASERVPFHLHTPDTL 240
           +            ++NLE+  +Y+ MD+EN+  +K +EEIE +K AS  VPFHLHTPD+L
Sbjct: 169 SSFA----QFGAPNNNLESLIQYDQMDMENYAMDKPTEEIEFQKTASGIVPFHLHTPDSL 224

Query: 241 LSLVDDIDVPADSVSKQSEKFRVASPYGDPPSNMLRD--IDSSGFVSLRTNWQIQGYLQE 298
           +   + +       S+ S+K   A+P     ++ L +  +D S F  LRTN QIQG+L E
Sbjct: 225 MKATEGLLHNRKETSRTSKKDTEATPVARASTSTLEESLVDESLF--LRTNLQIQGFLME 282

Query: 299 QADTIEKNGGAVSLNGFEII--LQQLQKLAPELHRVHFSSHLNGLAHDDYIAALENLHCY 356
           QAD IE +G + S +   I   L QLQKLAPELHRVHF  +LN L  DDY AAL+NL  Y
Sbjct: 283 QADAIEIHGSSSSFSSSSIESFLDQLQKLAPELHRVHFLRYLNKLHSDDYFAALDNLLRY 342

Query: 357 FDYSAGTEGIDYVPP-VGSNSFGRYEIGILCLGMMHFHFGHPKLALEVLTEAVRVSQQQN 415
           FDYSAGTEG D VPP  G + +GRYEIG+LCLGMMHF FGHP LALEVLTEAVRVSQQ +
Sbjct: 343 FDYSAGTEGFDLVPPSTGCSMYGRYEIGLLCLGMMHFRFGHPNLALEVLTEAVRVSQQLS 402

Query: 416 NDTCLAYTLAAISNLLFENGISSTAGILGSSYTPFTSIGIXXXXXXXXXXXXRGSLKRAE 475
           NDTCLAYTLAA+SNLL E GI+ST+G+LGSSY+P TS               + SL+RA+
Sbjct: 403 NDTCLAYTLAAMSNLLSEMGIASTSGVLGSSYSPVTSTASSLSVQQRVYILLKESLRRAD 462

Query: 476 NLKLKRLVASNHLAMAKFELTHVQRPLLSFGPKTSMKLSTCPVNVCKELRLSSHLISDFS 535
           +LKL+RLVASNHLAMAKFEL HVQRPLLSFGPK SM+  TCPV+VCKE+RL +HLISDFS
Sbjct: 463 SLKLRRLVASNHLAMAKFELMHVQRPLLSFGPKASMRHKTCPVSVCKEIRLGAHLISDFS 522

Query: 536 SESSAMTIDGAFSTAWLRNLQKPTGSLVLCQENGS 570
           SESS MTIDG+ S+AWL++LQKP G  V+  ++GS
Sbjct: 523 SESSTMTIDGSLSSAWLKDLQKPWGPPVISPDSGS 557