Miyakogusa Predicted Gene

Lj2g3v3072960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3072960.1 Non Chatacterized Hit- tr|I1M706|I1M706_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13657
PE,89.42,0,SUBFAMILY NOT NAMED,NULL; CT120 PROTEIN,NULL; TRAM, LAG1
and CLN8 homology domains.,TRAM/LAG1/CLN8 h,CUFF.39678.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19645.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   401   e-112
AT4G19645.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   401   e-112
AT1G31300.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   374   e-104
AT1G31300.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   374   e-104
AT4G10360.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   256   8e-69
AT4G10360.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   256   8e-69

>AT4G19645.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr4:10689941-10691298
           REVERSE LENGTH=268
          Length = 268

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/268 (71%), Positives = 222/268 (82%), Gaps = 1/268 (0%)

Query: 8   MKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKI 67
           M+ KSYQNQA  FV+ YLLADP +PYTS++ GI  CK+VYDLT+LFS+IH KSYS+LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 68  QRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITV-RSSSLSTFALGVSVGY 126
           +RIEWNNR IST+HAIFI+ M+LYF F S+L+SD  S E +TV R+S LSTF LGVSVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 127 FIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTTPGINLR 186
           F+ADL MIFW +PSLGG EY++HH  S  AVAYS+ SGE QLYTYMVLISE TTP INLR
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 187 WYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFGQILVIV 246
           WYLD AG+KRSKAYL+NGV IF AWL ARILLF+YMF H Y H+DQV  MHTFG +LV V
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 247 VPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           VP++LSVMNLIWF KI+KG+ K L KRQ
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268


>AT4G19645.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr4:10689941-10691298
           REVERSE LENGTH=268
          Length = 268

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/268 (71%), Positives = 222/268 (82%), Gaps = 1/268 (0%)

Query: 8   MKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKI 67
           M+ KSYQNQA  FV+ YLLADP +PYTS++ GI  CK+VYDLT+LFS+IH KSYS+LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 68  QRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITV-RSSSLSTFALGVSVGY 126
           +RIEWNNR IST+HAIFI+ M+LYF F S+L+SD  S E +TV R+S LSTF LGVSVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 127 FIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTTPGINLR 186
           F+ADL MIFW +PSLGG EY++HH  S  AVAYS+ SGE QLYTYMVLISE TTP INLR
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 187 WYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFGQILVIV 246
           WYLD AG+KRSKAYL+NGV IF AWL ARILLF+YMF H Y H+DQV  MHTFG +LV V
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 247 VPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           VP++LSVMNLIWF KI+KG+ K L KRQ
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268


>AT1G31300.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr1:11194308-11195955
           FORWARD LENGTH=278
          Length = 278

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/269 (66%), Positives = 211/269 (78%)

Query: 5   KDIMKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKSYSSL 64
           + I   KSY +QA   VK YLLADP IPYTS++ GIF CK+VYDL    S  H K+Y  L
Sbjct: 7   QTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYIIL 66

Query: 65  TKIQRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITVRSSSLSTFALGVSV 124
           TKIQRIEWNNR IST+HAIFI+ MSLYFVF S+L+SD    +L+  RSS LS+  LG+S+
Sbjct: 67  TKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGISI 126

Query: 125 GYFIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTTPGIN 184
           GYF+ADL MIFW +PSLGG EY++HH  S VAVAYS+ SGEGQLYTYMVLISE TTP IN
Sbjct: 127 GYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPEIN 186

Query: 185 LRWYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFGQILV 244
           LRWYLD AGMK+S AY++NGV IF+AWLVARILLF+YMF H YLH++QV  MH FG +LV
Sbjct: 187 LRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLV 246

Query: 245 IVVPLALSVMNLIWFSKIIKGMMKMLAKR 273
             VP AL VMNLIWF KI++G+ K LAKR
Sbjct: 247 FGVPAALGVMNLIWFGKIVRGVKKTLAKR 275


>AT1G31300.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr1:11194308-11195955
           FORWARD LENGTH=278
          Length = 278

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/269 (66%), Positives = 211/269 (78%)

Query: 5   KDIMKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKSYSSL 64
           + I   KSY +QA   VK YLLADP IPYTS++ GIF CK+VYDL    S  H K+Y  L
Sbjct: 7   QTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYIIL 66

Query: 65  TKIQRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITVRSSSLSTFALGVSV 124
           TKIQRIEWNNR IST+HAIFI+ MSLYFVF S+L+SD    +L+  RSS LS+  LG+S+
Sbjct: 67  TKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGISI 126

Query: 125 GYFIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTTPGIN 184
           GYF+ADL MIFW +PSLGG EY++HH  S VAVAYS+ SGEGQLYTYMVLISE TTP IN
Sbjct: 127 GYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPEIN 186

Query: 185 LRWYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFGQILV 244
           LRWYLD AGMK+S AY++NGV IF+AWLVARILLF+YMF H YLH++QV  MH FG +LV
Sbjct: 187 LRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLV 246

Query: 245 IVVPLALSVMNLIWFSKIIKGMMKMLAKR 273
             VP AL VMNLIWF KI++G+ K LAKR
Sbjct: 247 FGVPAALGVMNLIWFGKIVRGVKKTLAKR 275


>AT4G10360.2 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr4:6420679-6422108 FORWARD
           LENGTH=266
          Length = 266

 Score =  256 bits (655), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 117/240 (48%), Positives = 166/240 (69%)

Query: 35  SIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVF 94
           SI  G   CK+VYDLT+  S + F  Y  L    R+EWNNR  ST HA+F +  S+YF+ 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 95  CSNLYSDSESAELITVRSSSLSTFALGVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSL 154
            S+ + ++   + +   ++ LS   +G+S+GYF+ADLAMIFW+FP+LGG EYV HH  S+
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 155 VAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVA 214
            A+  S+ SG+ Q Y ++VL+SE TTP +NLRWYLD +G K SKAY +NG+ +F+ WLVA
Sbjct: 140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query: 215 RILLFVYMFCHAYLHFDQVQHMHTFGQILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           R+LLF++ F H YLHF QV+ +   G   ++ +P AL+VMNL+WF KI KG++K L+K +
Sbjct: 200 RVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAK 259


>AT4G10360.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr4:6420679-6422108 FORWARD
           LENGTH=266
          Length = 266

 Score =  256 bits (655), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 117/240 (48%), Positives = 166/240 (69%)

Query: 35  SIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVF 94
           SI  G   CK+VYDLT+  S + F  Y  L    R+EWNNR  ST HA+F +  S+YF+ 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 95  CSNLYSDSESAELITVRSSSLSTFALGVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSL 154
            S+ + ++   + +   ++ LS   +G+S+GYF+ADLAMIFW+FP+LGG EYV HH  S+
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 155 VAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVA 214
            A+  S+ SG+ Q Y ++VL+SE TTP +NLRWYLD +G K SKAY +NG+ +F+ WLVA
Sbjct: 140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query: 215 RILLFVYMFCHAYLHFDQVQHMHTFGQILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           R+LLF++ F H YLHF QV+ +   G   ++ +P AL+VMNL+WF KI KG++K L+K +
Sbjct: 200 RVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAK 259