Miyakogusa Predicted Gene
- Lj2g3v3069800.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3069800.2 Non Chatacterized Hit- tr|I1JIZ7|I1JIZ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27379
PE,79.7,0,IAA_ARF,Aux/IAA-ARF-dimerisation; CAD & PB1 domains,NULL;
AUX_IAA,AUX/IAA protein; FAMILY NOT NAMED,,CUFF.39663.2
(317 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 281 4e-76
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 281 4e-76
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 151 7e-37
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 137 7e-33
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 133 2e-31
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 133 2e-31
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 133 2e-31
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 120 9e-28
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 116 2e-26
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 91 7e-19
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 91 7e-19
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 91 7e-19
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 91 9e-19
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 89 6e-18
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 83 3e-16
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 83 3e-16
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 83 3e-16
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 83 3e-16
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 77 2e-14
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 75 5e-14
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 75 6e-14
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 75 8e-14
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 74 1e-13
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 74 1e-13
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 74 2e-13
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 71 1e-12
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 70 2e-12
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 70 2e-12
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 70 3e-12
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 68 1e-11
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 62 4e-10
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 2e-09
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 2e-09
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 2e-09
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 57 2e-08
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 52 4e-07
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 52 5e-07
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 52 6e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 52 6e-07
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 51 1e-06
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 51 1e-06
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 1e-06
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 49 4e-06
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 49 4e-06
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 48 7e-06
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 182/352 (51%), Positives = 231/352 (65%), Gaps = 48/352 (13%)
Query: 1 MQALASHCQQQSFPNPIRNHISSSDVSTFQSLLGSFSQDGTSQFLNLNGSNSVPTAAA-- 58
+Q++ S C QQSF + + ++ +S +LL +FSQD +SQ L+L +NS T++
Sbjct: 597 LQSMTSLCHQQSFSD---TNGGNNPISPLHTLLSNFSQDESSQLLHLTRTNSAMTSSGWP 653
Query: 59 --------------------NCVLPQVVNMGTSQSNVSELSALPPFPG-REHSAYQ--GA 95
VL Q+ TS + +S LPPFPG RE S Q A
Sbjct: 654 SKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVS-LPPFPGGRECSIEQEGSA 712
Query: 96 ADPQSNLPFGINVDPSSLMLQNGMQNLRNIG-NVNDSLSLPFSASNCDGVTGTDFPLSSN 154
+DP S+L FG+N+D SSL++ NGM NLR+IG DS +LPF++SN + DF S N
Sbjct: 713 SDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFN----NDF--SGN 766
Query: 155 IA---ASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSEL 211
+A SSC+DESGFLQSSEN+ N + TFVKV+KSGSFGRSLDISKFSSY ELRSEL
Sbjct: 767 LAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSEL 826
Query: 212 ARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
ARMFGLEGQLEDP +RSGWQLVFVDREND+LLLGDDPW EFV++V IKILSP EVQ+M
Sbjct: 827 ARMFGLEGQLEDP--VRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 884
Query: 272 G-RSVATSTSSPG----HKLSNNGNSCDDYASRQELRSSRNGVAPM-GSFHY 317
G R + S+P KL +NGN CDD+ +R + R+ NG+A + GSF+Y
Sbjct: 885 GKRGLELLNSAPSSNNVDKLPSNGN-CDDFGNRSDPRNLGNGIASVGGSFNY 935
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 182/352 (51%), Positives = 231/352 (65%), Gaps = 48/352 (13%)
Query: 1 MQALASHCQQQSFPNPIRNHISSSDVSTFQSLLGSFSQDGTSQFLNLNGSNSVPTAAA-- 58
+Q++ S C QQSF + + ++ +S +LL +FSQD +SQ L+L +NS T++
Sbjct: 595 LQSMTSLCHQQSFSD---TNGGNNPISPLHTLLSNFSQDESSQLLHLTRTNSAMTSSGWP 651
Query: 59 --------------------NCVLPQVVNMGTSQSNVSELSALPPFPG-REHSAYQ--GA 95
VL Q+ TS + +S LPPFPG RE S Q A
Sbjct: 652 SKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVS-LPPFPGGRECSIEQEGSA 710
Query: 96 ADPQSNLPFGINVDPSSLMLQNGMQNLRNIG-NVNDSLSLPFSASNCDGVTGTDFPLSSN 154
+DP S+L FG+N+D SSL++ NGM NLR+IG DS +LPF++SN + DF S N
Sbjct: 711 SDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFN----NDF--SGN 764
Query: 155 IA---ASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSEL 211
+A SSC+DESGFLQSSEN+ N + TFVKV+KSGSFGRSLDISKFSSY ELRSEL
Sbjct: 765 LAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSEL 824
Query: 212 ARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
ARMFGLEGQLEDP +RSGWQLVFVDREND+LLLGDDPW EFV++V IKILSP EVQ+M
Sbjct: 825 ARMFGLEGQLEDP--VRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 882
Query: 272 G-RSVATSTSSPG----HKLSNNGNSCDDYASRQELRSSRNGVAPM-GSFHY 317
G R + S+P KL +NGN CDD+ +R + R+ NG+A + GSF+Y
Sbjct: 883 GKRGLELLNSAPSSNNVDKLPSNGN-CDDFGNRSDPRNLGNGIASVGGSFNY 933
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
Query: 159 SCVDESG--FLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFG 216
SC+ ++ L + ++ +N T FVKV+KSGS GRSLDIS+FSSY ELR EL +MF
Sbjct: 682 SCMQDTTHELLHGAGQINSSNQ-TKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFA 740
Query: 217 LEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMG 272
+EG LEDP LRSGWQLVFVD+ENDILLLGDDPW+ FVNNV YIKILSP +V +MG
Sbjct: 741 IEGLLEDP--LRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 18/208 (8%)
Query: 98 PQSNLPFGINVDPSS---LMLQNGMQNL-RNIGNVNDSLSLPFSASNCDGVTGTDFPLSS 153
P++NL F N++ + L Q QNL N GN + S++ ++ F + S
Sbjct: 868 PRNNLAFPGNLEAVTSDPLYSQKDFQNLVPNYGNTPRDIETELSSA---AISSQSFGIPS 924
Query: 154 NIAASSC------VDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDEL 207
C +++SG + T+ KV K GS GRS+D++++S YDEL
Sbjct: 925 IPFKPGCSNEVGGINDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDEL 984
Query: 208 RSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
R +LARMFG+EGQLEDP+T S W+LV+ D ENDILL+GDDPW+EFVN V IKILS +E
Sbjct: 985 RHDLARMFGIEGQLEDPLT--SDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVE 1042
Query: 268 VQEM---GRSVATSTSSPGHKLSNNGNS 292
VQ+M G A T++ +++GN+
Sbjct: 1043 VQQMSLDGDLAAIPTTNQACSETDSGNA 1070
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 96 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 145
D +++L G NVD P +L+ Q +QN L N G V + + S S V
Sbjct: 944 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTS---AVR 1000
Query: 146 GTDF--PLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSS 203
F P I+ V+++G L Q T+ KV K GS GRS+D++++
Sbjct: 1001 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRG 1059
Query: 204 YDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKIL 263
YDELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKIL
Sbjct: 1060 YDELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKIL 1117
Query: 264 SPLEVQEM 271
S EVQ+M
Sbjct: 1118 SSAEVQQM 1125
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 96 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 145
D +++L G NVD P +L+ Q +QN L N G V + + S S V
Sbjct: 945 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTS---AVR 1001
Query: 146 GTDF--PLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSS 203
F P I+ V+++G L Q T+ KV K GS GRS+D++++
Sbjct: 1002 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRG 1060
Query: 204 YDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKIL 263
YDELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKIL
Sbjct: 1061 YDELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKIL 1118
Query: 264 SPLEVQEM 271
S EVQ+M
Sbjct: 1119 SSAEVQQM 1126
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 96 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 145
D +++L G NVD P +L+ Q +QN L N G V + + S S V
Sbjct: 945 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTS---AVR 1001
Query: 146 GTDF--PLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSS 203
F P I+ V+++G L Q T+ KV K GS GRS+D++++
Sbjct: 1002 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRG 1060
Query: 204 YDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKIL 263
YDELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKIL
Sbjct: 1061 YDELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKIL 1118
Query: 264 SPLEVQEM 271
S EVQ+M
Sbjct: 1119 SSAEVQQM 1126
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 5/95 (5%)
Query: 159 SCVDESG--FLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFG 216
SC+ ++ L + ++ +N T FVKV+KSGS GRSLDIS+FSSY ELR EL +MF
Sbjct: 682 SCMQDTTHELLHGAGQINSSNQ-TKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFA 740
Query: 217 LEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQ 251
+EG LEDP LRSGWQLVFVD+ENDILLLGDDPW+
Sbjct: 741 IEGLLEDP--LRSGWQLVFVDKENDILLLGDDPWE 773
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 182 TFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREND 241
T+ KV K+GS GRS+D++ F Y+EL+S + MFGLEG L P + SGW+LV+VD E+D
Sbjct: 794 TYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQS--SGWKLVYVDYESD 851
Query: 242 ILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+LL+GDDPW+EFV V I+ILSP EVQ+M
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 881
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 184 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 242
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 243 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 184 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 242
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 243 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 184 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 242
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 243 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 184 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 242
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 243 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Query: 185 KVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDIL 243
KVHK GS GR++D+S+ + YD+L EL R+F +EG L DP GW++++ D END++
Sbjct: 669 KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDP---EKGWRILYTDSENDMM 725
Query: 244 LLGDDPWQEFVNNVSYIKILSPLEVQ 269
++GDDPW +F N V I + + EV+
Sbjct: 726 VVGDDPWHDFCNVVWKIHLYTKEEVE 751
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 45/196 (22%)
Query: 118 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 177
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 469 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 517
Query: 178 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 215
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 518 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 577
Query: 216 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 275
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 578 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 630
Query: 276 ATSTSSPGHKLSNNGN 291
SP +KL+ N
Sbjct: 631 -----SPKNKLAVNAR 641
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 45/196 (22%)
Query: 118 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 177
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 469 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 517
Query: 178 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 215
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 518 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 577
Query: 216 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 275
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 578 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 630
Query: 276 ATSTSSPGHKLSNNGN 291
SP +KL+ N
Sbjct: 631 -----SPKNKLAVNAR 641
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 45/196 (22%)
Query: 118 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 177
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 464 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 512
Query: 178 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 215
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 513 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 572
Query: 216 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 275
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 573 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 625
Query: 276 ATSTSSPGHKLSNNGN 291
SP +KL+ N
Sbjct: 626 -----SPKNKLAVNAR 636
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 45/196 (22%)
Query: 118 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 177
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 466 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 514
Query: 178 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 215
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 515 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 574
Query: 216 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 275
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 575 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 627
Query: 276 ATSTSSPGHKLSNNGN 291
SP +KL+ N
Sbjct: 628 -----SPKNKLAVNAR 638
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 157 ASSCVDESGFLQSSENVDQANTPTGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF 215
A+ C + SE Q + + T KV G + GR++D++ SYDEL EL MF
Sbjct: 467 AAKCQEPITPTSMSEQKKQQTSRSRT--KVQMQGIAVGRAVDLTLLKSYDELIDELEEMF 524
Query: 216 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 275
++GQL R W +VF D E D++L GDDPW EF I I S EV++M +
Sbjct: 525 EIQGQL----LARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKL 580
Query: 276 ATSTS 280
S+S
Sbjct: 581 KISSS 585
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 151 LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRS 209
+ SNI+ S+ + +S + T T + +KV G+ GR++D++ SYDEL
Sbjct: 373 VDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIK 432
Query: 210 ELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 269
EL +MF +EG+L + W +VF D E D +L+GDDPW EF + I EV+
Sbjct: 433 ELEKMFEIEGELSP----KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 488
Query: 270 EM 271
+M
Sbjct: 489 KM 490
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 151 LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRS 209
+ SNI+ S+ + +S + T T + +KV G+ GR++D++ SYDEL
Sbjct: 460 VDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIK 519
Query: 210 ELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 269
EL +MF +EG+L + + W +VF D E D +L+GDDPW EF + I EV+
Sbjct: 520 ELEKMFEIEGEL----SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 575
Query: 270 EM 271
+M
Sbjct: 576 KM 577
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 175 QANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQL 233
+ T T + +KV G+ GR++D++ SYDEL EL +MF +EG+L + W +
Sbjct: 505 KQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP----KDKWAI 560
Query: 234 VFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
VF D E D +L+GDDPW EF + I EV++M
Sbjct: 561 VFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T + KV G GR++D++ Y+EL ++ ++F ++G+L R+ W++VF D
Sbjct: 520 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS----RNQWEIVFTDD 575
Query: 239 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
E D++L+GDDPW EF N V I I S EV++M
Sbjct: 576 EGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T + KV G GR++D++ Y+EL ++ ++F ++G+L R+ W++VF D
Sbjct: 522 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS----RNQWEIVFTDD 577
Query: 239 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
E D++L+GDDPW EF N V I I S EV++M
Sbjct: 578 EGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F +
Sbjct: 509 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQA----RNQWEIAFTNN 564
Query: 239 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
E D +L+G+DPW EF N V I I S EV+ +
Sbjct: 565 EEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W+++F
Sbjct: 515 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT----RNQWKIIFTGS 570
Query: 239 ENDILLLGDDPWQEFVNNVSYIKI 262
+ D +L+GDDPW EF N V I I
Sbjct: 571 DEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 182 TFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREN 240
T KV G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D +
Sbjct: 512 TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT----RNQWEIAFTDSDE 567
Query: 241 DILLLGDDPWQEFVNNVSYIKI 262
D +L+GDDPW EF N V I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T T KV G + R++D+S + YD+L EL +F L+GQL+ R+ W++ F D
Sbjct: 508 TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQT----RNQWEIAFTDS 563
Query: 239 ENDILLLGDDPWQEFVNNVSYIKILS----PLEVQ 269
++D +L+GDDPW EF N V I I LEVQ
Sbjct: 564 DDDKMLVGDDPWPEFCNMVKKILIFKRGGQKLEVQ 598
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 180 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 238
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F D
Sbjct: 494 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT----RNQWKIAFTDS 549
Query: 239 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 269
+ +L+GDDPW EF V I I S EV+
Sbjct: 550 DGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 182 TFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREN 240
T KV G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D +
Sbjct: 512 TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT----RNQWKIAFTDSDG 567
Query: 241 DILLLGDDPWQEFVNNVSYIKILSPLEVQ 269
+L+GDDPW EF V I I S EV+
Sbjct: 568 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREND 241
KVH G + R++D++ Y++L +L +F L+D + R+ W++VF + E
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELF----DLKDELRTRNQWEIVFTNNEGA 490
Query: 242 ILLLGDDPWQEFVNNVSYIKILSPLEVQEM 271
+L+GDDPW EF N I I S E+++M
Sbjct: 491 EMLVGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 230
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 231 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 230
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 231 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 230
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 231 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF-GLEG----QLEDPMTLRSG---WQL 233
FVKV+ G GR +D+ SSY+ L L MF G+ G + P+ L G + L
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185
Query: 234 VFVDRENDILLLGDDPWQEFVNNVSYIKIL 263
+ D+E D +L+GD PW+ F+N+V ++I+
Sbjct: 186 TYEDKEGDWMLVGDVPWRMFINSVKRLRIM 215
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF----------GLEGQLEDPMTL---- 227
FVKV G GR +D++ Y+ L + L MF +G +E P+ +
Sbjct: 138 FVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDG 197
Query: 228 RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMG 272
SG L + D+E D +L+GD PW F+ +V ++I+ E G
Sbjct: 198 SSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKG 242
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 180 TGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMF---------GLEGQLE-----DP 224
FVKV G+ + R +D+ + SYDEL + L+ MF G EG ++
Sbjct: 109 AAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKL 168
Query: 225 MTLRSGWQLV--FVDRENDILLLGDDPWQEFVNNVSYIKILS 264
M L + W V + D++ D +L+GD PW FV+ ++++
Sbjct: 169 MDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMK 210
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 15/103 (14%)
Query: 181 GTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF-GL--------EGQLEDPMTL--- 227
G FVK++ G GR +D++ ++SY++L + ++F GL +GQ E+ +
Sbjct: 151 GMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLL 210
Query: 228 --RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEV 268
+ + L + D E D +L+GD PWQ FV++V ++++ E+
Sbjct: 211 DGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 183 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF----------GLEGQLEDPMTL---- 227
FVKV G GR +D++ Y+ L + L MF +G +E P+ +
Sbjct: 138 FVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDG 197
Query: 228 RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
SG L + D+E D +L+GD PW F+ +V ++I+ E
Sbjct: 198 SSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 181 GTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF-GLEG---------QLEDPMT-LR 228
G FVK++ G GR +D+S +SY++L + ++F GL + E P+T L
Sbjct: 149 GMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLL 208
Query: 229 SG---WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEV 268
G + L + D E D +L+GD PWQ FV++V ++++ E+
Sbjct: 209 DGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 127 NVNDSLSLPFSASNCDGVTGTDFP-LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVK 185
+VN SLSL F +++ D+P + S + + + L+ ++ T FVK
Sbjct: 26 SVNLSLSLTFPSTSPQREARQDWPPIKSRLRDT--LKGRRLLRRGDD-------TSLFVK 76
Query: 186 VHKSG-SFGRSLDISKFSSYDELRSELARMFG---LEGQLEDPMTLRSGWQLVFVDREND 241
V+ G GR LD+ FS Y+ L L+ MF + G + R L + D++ D
Sbjct: 77 VYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRD-----RKHHVLTYEDKDGD 131
Query: 242 ILLLGDDPWQEFVNNVSYIKILSP 265
+++GD PW F+ V +KI P
Sbjct: 132 WMMVGDIPWDMFLETVRRLKITRP 155
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 174 DQANTPTGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF----------GLEGQLE 222
D FVKV G GR +D++ Y+ L + L MF +G +E
Sbjct: 129 DSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHME 188
Query: 223 DPMTL----RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 267
P+ + SG L + D+E D +L+GD PW F+ +V ++I+ E
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 174 DQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFG---LEGQLEDPMTLRS 229
++ N+ +VKV+ G GR +D+ + Y +L + L MF L + ED + +S
Sbjct: 75 NECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKS 134
Query: 230 GWQLVFVDRENDILLLGDDPWQEFVNNVSYIKI 262
L + D+E D +++GD PW+ F+++V +KI
Sbjct: 135 H-VLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 183 FVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREND 241
+VK++ G GR +++S +++Y +L + ++F + D L + LV+ D E D
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKK----DSWDLNRQYTLVYEDTEGD 137
Query: 242 ILLLGDDPWQEFVNNVSYIKILS 264
+L+GD PW+ FV+ V + +L
Sbjct: 138 KVLVGDVPWEMFVSTVKRLHVLK 160
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 181 GTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLE-GQLEDPMTLRSGWQ-----L 233
G +VKV G+ + R +D++ + Y EL L MF G+ + R G++
Sbjct: 88 GNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFE----REGYKGSDFVP 143
Query: 234 VFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMG 272
+ D++ D +L+GD PW+ FV++ ++I+ EV+ +G
Sbjct: 144 TYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182