Miyakogusa Predicted Gene
- Lj2g3v3069800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3069800.1 Non Chatacterized Hit- tr|I1M725|I1M725_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54340 PE,86.41,0,B3 DNA
binding domain,B3 DNA binding domain; Auxin_resp,Auxin response
factor; B3,B3 DNA binding dom,CUFF.39663.1
(877 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 760 0.0
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 759 0.0
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 693 0.0
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 693 0.0
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 510 e-144
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 501 e-142
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 497 e-140
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 496 e-140
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 486 e-137
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 392 e-109
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 392 e-109
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 392 e-109
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 392 e-109
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 375 e-103
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 367 e-101
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 355 6e-98
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 355 9e-98
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 354 2e-97
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 339 5e-93
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 327 2e-89
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 327 3e-89
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 290 2e-78
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 284 2e-76
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 283 3e-76
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 278 1e-74
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 276 5e-74
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 270 4e-72
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 267 2e-71
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 265 1e-70
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 262 9e-70
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 258 9e-69
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 241 2e-63
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 241 2e-63
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 187 2e-47
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 171 2e-42
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 61 3e-09
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 5e-09
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 5e-09
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 5e-09
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 60 6e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 60 1e-08
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 59 2e-08
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 58 3e-08
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 57 8e-08
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 55 3e-07
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 54 4e-07
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 54 4e-07
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 54 5e-07
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 54 7e-07
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 54 7e-07
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 53 1e-06
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 53 1e-06
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 52 2e-06
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 52 2e-06
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 52 3e-06
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 51 3e-06
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 51 5e-06
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 6e-06
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 8e-06
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 1e-05
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/461 (80%), Positives = 402/461 (87%), Gaps = 11/461 (2%)
Query: 1 MKLSSSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR 60
M+LSS+G + Q EGEK+ LNSELWHACAGPLVSLPP+GSRVVYFPQGHSEQVAASTN+
Sbjct: 1 MRLSSAGFNPQ-PHEGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNK 59
Query: 61 EVDAHIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT 120
EVDAHIPNYP+L PQLICQLHN TMHAD ETDEVYAQMTLQPL+ QEQK+ YL PAELG
Sbjct: 60 EVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYL-PAELGV 118
Query: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWK 180
PS+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQEL+ARDL+DNEWK
Sbjct: 119 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 178
Query: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSS 240
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRANR QT+MPSS
Sbjct: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS 238
Query: 241 VLSSDSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300
VLSSDSMH+GLL +TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF
Sbjct: 239 VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 298
Query: 301 RMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360
RMLFETEESSVRRY+GTITGI DLD RW NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 299 RMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
Query: 361 LTTFPMYPSSFPLRLRRPWLSGPPSLYGLKDGD--MSISSPXXXXXXXXXXXXXXXXNFQ 418
LTTFPMYPS FPLRL+RPW G PS +GLK+ D MS+SSP NFQ
Sbjct: 359 LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSP------LMWDRGLQSLNFQ 412
Query: 419 GLGVTPWVQPRLDAS-TPGLHPELYQAMTSAAFQEMRTMNP 458
G+GV PW+QPRLD S G+ ++YQAM +AA Q+MR ++P
Sbjct: 413 GMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDP 453
Score = 290 bits (741), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 239/366 (65%), Gaps = 48/366 (13%)
Query: 547 LSNLSSGTQSHSPPMQALASHCQQQSFPNPIRNHISSSDVSTFQSLLGSFSQDGTSQFLN 606
+S S +Q ++ P+Q++ S C QQSF + + ++ +S +LL +FSQD +SQ L+
Sbjct: 581 MSQFGSASQPNTSPLQSMTSLCHQQSFSD---TNGGNNPISPLHTLLSNFSQDESSQLLH 637
Query: 607 LNGSNSVPTAAA----------------------NCVLPQVVNMGTSQSNVSELSALPPF 644
L +NS T++ VL Q+ TS + +S LPPF
Sbjct: 638 LTRTNSAMTSSGWPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVS-LPPF 696
Query: 645 PG-REHSAYQ--GAADPQSNLPFGINVDPSSLMLQNGMQNLRNIG-NVNDSLSLPFSASN 700
PG RE S Q A+DP S+L FG+N+D SSL++ NGM NLR+IG DS +LPF++SN
Sbjct: 697 PGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSN 756
Query: 701 CDGVTGTDFPLSSNIAA---SSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLD 757
+ DF S N+A SSC+DESGFLQSSEN+ N + TFVKV+KSGSFGRSLD
Sbjct: 757 FN----NDF--SGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLD 810
Query: 758 ISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNV 817
ISKFSSY ELRSELARMFGLEGQLEDP +RSGWQLVFVDREND+LLLGDDPW EFV++V
Sbjct: 811 ISKFSSYHELRSELARMFGLEGQLEDP--VRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 868
Query: 818 SYIKILSPLEVQEMG-RSVATSTSSPG----HKLSNNGNSCDDYASRQELRSSRNGVAPM 872
IKILSP EVQ+MG R + S+P KL +NGN CDD+ +R + R+ NG+A +
Sbjct: 869 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGN-CDDFGNRSDPRNLGNGIASV 927
Query: 873 -GSFHY 877
GSF+Y
Sbjct: 928 GGSFNY 933
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/462 (80%), Positives = 402/462 (87%), Gaps = 11/462 (2%)
Query: 1 MKLSSSGLDQQLEE-EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTN 59
M+LSS+G + Q E GEK+ LNSELWHACAGPLVSLPP+GSRVVYFPQGHSEQVAASTN
Sbjct: 1 MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60
Query: 60 REVDAHIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELG 119
+EVDAHIPNYP+L PQLICQLHN TMHAD ETDEVYAQMTLQPL+ QEQK+ YL PAELG
Sbjct: 61 KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYL-PAELG 119
Query: 120 TPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEW 179
PS+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQEL+ARDL+DNEW
Sbjct: 120 VPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEW 179
Query: 180 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPS 239
KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRANR QT+MPS
Sbjct: 180 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPS 239
Query: 240 SVLSSDSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR 299
SVLSSDSMH+GLL +TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR
Sbjct: 240 SVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR 299
Query: 300 FRMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 359
FRMLFETEESSVRRY+GTITGI DLD RW NSHWRSVKVGWDESTAGERQPRVSLWEIE
Sbjct: 300 FRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIE 359
Query: 360 PLTTFPMYPSSFPLRLRRPWLSGPPSLYGLKDGD--MSISSPXXXXXXXXXXXXXXXXNF 417
PLTTFPMYPS FPLRL+RPW G PS +GLK+ D MS+SSP NF
Sbjct: 360 PLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSP------LMWDRGLQSLNF 413
Query: 418 QGLGVTPWVQPRLDAS-TPGLHPELYQAMTSAAFQEMRTMNP 458
QG+GV PW+QPRLD S G+ ++YQAM +AA Q+MR ++P
Sbjct: 414 QGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDP 455
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 239/366 (65%), Gaps = 48/366 (13%)
Query: 547 LSNLSSGTQSHSPPMQALASHCQQQSFPNPIRNHISSSDVSTFQSLLGSFSQDGTSQFLN 606
+S S +Q ++ P+Q++ S C QQSF + + ++ +S +LL +FSQD +SQ L+
Sbjct: 583 MSQFGSASQPNTSPLQSMTSLCHQQSFSD---TNGGNNPISPLHTLLSNFSQDESSQLLH 639
Query: 607 LNGSNSVPTAAA----------------------NCVLPQVVNMGTSQSNVSELSALPPF 644
L +NS T++ VL Q+ TS + +S LPPF
Sbjct: 640 LTRTNSAMTSSGWPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVS-LPPF 698
Query: 645 PG-REHSAYQ--GAADPQSNLPFGINVDPSSLMLQNGMQNLRNIG-NVNDSLSLPFSASN 700
PG RE S Q A+DP S+L FG+N+D SSL++ NGM NLR+IG DS +LPF++SN
Sbjct: 699 PGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSN 758
Query: 701 CDGVTGTDFPLSSNIAA---SSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLD 757
+ DF S N+A SSC+DESGFLQSSEN+ N + TFVKV+KSGSFGRSLD
Sbjct: 759 FN----NDF--SGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLD 812
Query: 758 ISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNV 817
ISKFSSY ELRSELARMFGLEGQLEDP +RSGWQLVFVDREND+LLLGDDPW EFV++V
Sbjct: 813 ISKFSSYHELRSELARMFGLEGQLEDP--VRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 870
Query: 818 SYIKILSPLEVQEMG-RSVATSTSSPG----HKLSNNGNSCDDYASRQELRSSRNGVAPM 872
IKILSP EVQ+MG R + S+P KL +NGN CDD+ +R + R+ NG+A +
Sbjct: 871 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGN-CDDFGNRSDPRNLGNGIASV 929
Query: 873 -GSFHY 877
GSF+Y
Sbjct: 930 GGSFNY 935
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/459 (75%), Positives = 382/459 (83%), Gaps = 6/459 (1%)
Query: 1 MKLSSSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR 60
MKLS+SGL QQ EGEK CLNSELWHACAGPLVSLP GSRVVYFPQGHSEQVAA+TN+
Sbjct: 1 MKLSTSGLGQQ-GHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 58
Query: 61 EVDAHIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT 120
EVD HIPNYP+LPPQLICQLHN TMHAD ETDEVYAQMTLQPL+P+EQKE ++ P ELG
Sbjct: 59 EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFV-PIELGI 117
Query: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWK 180
PSKQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDY+ QPPAQELIARDL+D EWK
Sbjct: 118 PSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWK 177
Query: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSS 240
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A R QTI+PSS
Sbjct: 178 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSS 237
Query: 241 VLSSDSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300
VLSSDSMHIGLL +TNS FT+F++PRAS SEFVI L+KY+KAV+HTR+SVGMRF
Sbjct: 238 VLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRF 297
Query: 301 RMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360
RMLFETEESSVRRY+GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 298 RMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 357
Query: 361 LTTFPMYPSSFPLRLRRPWLSGPPSLYGLKDGDMSISSPXXXXXXXXXXXXXXXXNFQGL 420
LTTFPMYPS FPLRL+RPW +G SL + GD+ S N+ +
Sbjct: 358 LTTFPMYPSLFPLRLKRPWHAGTSSLPDGR-GDLG-SGLTWLRGGGGEQQGLLPLNYPSV 415
Query: 421 GVTPWVQPRLDASTPGL-HPELYQAMTSAAFQEMRTMNP 458
G+ PW+Q RLD S G + + YQAM +A Q + +P
Sbjct: 416 GLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDP 454
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 5/95 (5%)
Query: 719 SCVDESG--FLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFG 776
SC+ ++ L + ++ +N T FVKV+KSGS GRSLDIS+FSSY ELR EL +MF
Sbjct: 682 SCMQDTTHELLHGAGQINSSNQ-TKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFA 740
Query: 777 LEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQ 811
+EG LEDP LRSGWQLVFVD+ENDILLLGDDPW+
Sbjct: 741 IEGLLEDP--LRSGWQLVFVDKENDILLLGDDPWE 773
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/459 (75%), Positives = 382/459 (83%), Gaps = 6/459 (1%)
Query: 1 MKLSSSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR 60
MKLS+SGL QQ EGEK CLNSELWHACAGPLVSLP GSRVVYFPQGHSEQVAA+TN+
Sbjct: 1 MKLSTSGLGQQ-GHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 58
Query: 61 EVDAHIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT 120
EVD HIPNYP+LPPQLICQLHN TMHAD ETDEVYAQMTLQPL+P+EQKE ++ P ELG
Sbjct: 59 EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFV-PIELGI 117
Query: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWK 180
PSKQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDY+ QPPAQELIARDL+D EWK
Sbjct: 118 PSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWK 177
Query: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSS 240
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A R QTI+PSS
Sbjct: 178 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSS 237
Query: 241 VLSSDSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300
VLSSDSMHIGLL +TNS FT+F++PRAS SEFVI L+KY+KAV+HTR+SVGMRF
Sbjct: 238 VLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRF 297
Query: 301 RMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360
RMLFETEESSVRRY+GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 298 RMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 357
Query: 361 LTTFPMYPSSFPLRLRRPWLSGPPSLYGLKDGDMSISSPXXXXXXXXXXXXXXXXNFQGL 420
LTTFPMYPS FPLRL+RPW +G SL + GD+ S N+ +
Sbjct: 358 LTTFPMYPSLFPLRLKRPWHAGTSSLPDGR-GDLG-SGLTWLRGGGGEQQGLLPLNYPSV 415
Query: 421 GVTPWVQPRLDASTPGL-HPELYQAMTSAAFQEMRTMNP 458
G+ PW+Q RLD S G + + YQAM +A Q + +P
Sbjct: 416 GLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDP 454
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
Query: 719 SCVDESG--FLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFG 776
SC+ ++ L + ++ +N T FVKV+KSGS GRSLDIS+FSSY ELR EL +MF
Sbjct: 682 SCMQDTTHELLHGAGQINSSNQ-TKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFA 740
Query: 777 LEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMG 832
+EG LEDP LRSGWQLVFVD+ENDILLLGDDPW+ FVNNV YIKILSP +V +MG
Sbjct: 741 IEGLLEDP--LRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/372 (68%), Positives = 305/372 (81%), Gaps = 7/372 (1%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
EGEKK +NS+LWHACAGPLVSLPP+GS VVYFPQGHSEQVAAS ++ D IPNYPNLP
Sbjct: 14 EGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPS 72
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTP-SKQPTNYFCKTL 133
+LIC LH+ T+HAD ETDEVYAQMTLQP++ +++ LL +++G ++QPT +FCKTL
Sbjct: 73 KLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREA--LLASDMGLKLNRQPTEFFCKTL 130
Query: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHL 193
TASDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQE++A+DL+D W FRHI+RGQPKRHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHL 190
Query: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLX 253
LTTGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRANR + SSV+SSDSMHIG+L
Sbjct: 191 LTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILA 250
Query: 254 XXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 313
+ +S FTIF+NPRASPSEFV+PLAKY KA+Y +VS+GMRFRM+FETE+ VRR
Sbjct: 251 AAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRR 309
Query: 314 YVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSSFP 372
Y+GT+TGISDLD VRW S WR+++VGWDESTAG+R RVS+WEIEP+ T F + P F
Sbjct: 310 YMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPF- 368
Query: 373 LRLRRPWLSGPP 384
R + P G P
Sbjct: 369 FRPKYPRQPGMP 380
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 16/207 (7%)
Query: 658 PQSNLPFGINVDPSS---LMLQNGMQNLR-NIGN----VNDSLSLPFSASNCDGVTGTDF 709
P++NL F N++ + L Q QNL N GN + LS +S G+ F
Sbjct: 868 PRNNLAFPGNLEAVTSDPLYSQKDFQNLVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 927
Query: 710 -PLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELR 768
P SN +++SG + T+ KV K GS GRS+D++++S YDELR
Sbjct: 928 KPGCSNEVGG--INDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELR 985
Query: 769 SELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEV 828
+LARMFG+EGQLEDP+T S W+LV+ D ENDILL+GDDPW+EFVN V IKILS +EV
Sbjct: 986 HDLARMFGIEGQLEDPLT--SDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEV 1043
Query: 829 QEM---GRSVATSTSSPGHKLSNNGNS 852
Q+M G A T++ +++GN+
Sbjct: 1044 QQMSLDGDLAAIPTTNQACSETDSGNA 1070
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/386 (65%), Positives = 306/386 (79%), Gaps = 13/386 (3%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
EGE++ +NSELWHACAGPL+SLPP GS VVYFPQGHSEQVAAS ++ D IP+YPNLP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPS 73
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTP-SKQPTNYFCKTL 133
+LIC LHN T++AD ETDEVYAQMTLQP++ ++ LL +++G ++QP +FCKTL
Sbjct: 74 KLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDA--LLASDMGLKLNRQPNEFFCKTL 131
Query: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHL 193
TASDTSTHGGFSVPRRAAEK+FP LD+S QPP QEL+A+D++DN W FRHI+RGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHL 191
Query: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLX 253
LTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSDSMHIG+L
Sbjct: 192 LTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLA 251
Query: 254 XXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 313
+ NS FTIFYNPRA+P+EFV+PLAKY KA+Y +VS+GMRFRM+FETEE VRR
Sbjct: 252 AAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRR 310
Query: 314 YVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSSFP 372
Y+GT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IEP LT F + P F
Sbjct: 311 YMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF- 369
Query: 373 LRLRRPWLSGPPSLYGLKDGDMSISS 398
RP SG P G+ D + + S
Sbjct: 370 ---FRPRFSGQP---GMPDDETDMES 389
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 108/186 (58%), Gaps = 14/186 (7%)
Query: 656 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 705
D +++L G NVD P +L+ Q +QN L N G V + + S S
Sbjct: 944 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVR-TQ 1002
Query: 706 GTDFPLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYD 765
P I+ V+++G L Q T+ KV K GS GRS+D++++ YD
Sbjct: 1003 SFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRGYD 1061
Query: 766 ELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSP 825
ELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKILS
Sbjct: 1062 ELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSS 1119
Query: 826 LEVQEM 831
EVQ+M
Sbjct: 1120 AEVQQM 1125
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/387 (65%), Positives = 306/387 (79%), Gaps = 14/387 (3%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
EGE++ +NSELWHACAGPL+SLPP GS VVYFPQGHSEQVAAS ++ D IP+YPNLP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPS 73
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTP-SKQPTNYFCKTL 133
+LIC LHN T++AD ETDEVYAQMTLQP++ ++ LL +++G ++QP +FCKTL
Sbjct: 74 KLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDA--LLASDMGLKLNRQPNEFFCKTL 131
Query: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHL 193
TASDTSTHGGFSVPRRAAEK+FP LD+S QPP QEL+A+D++DN W FRHI+RGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHL 191
Query: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLX 253
LTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSDSMHIG+L
Sbjct: 192 LTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLA 251
Query: 254 XXXXXXSTNSRFTIFYNPR-ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 312
+ NS FTIFYNPR A+P+EFV+PLAKY KA+Y +VS+GMRFRM+FETEE VR
Sbjct: 252 AAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVR 310
Query: 313 RYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSSF 371
RY+GT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IEP LT F + P F
Sbjct: 311 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF 370
Query: 372 PLRLRRPWLSGPPSLYGLKDGDMSISS 398
RP SG P G+ D + + S
Sbjct: 371 ----FRPRFSGQP---GMPDDETDMES 390
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 108/186 (58%), Gaps = 14/186 (7%)
Query: 656 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 705
D +++L G NVD P +L+ Q +QN L N G V + + S S
Sbjct: 945 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVR-TQ 1003
Query: 706 GTDFPLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYD 765
P I+ V+++G L Q T+ KV K GS GRS+D++++ YD
Sbjct: 1004 SFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRGYD 1062
Query: 766 ELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSP 825
ELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKILS
Sbjct: 1063 ELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSS 1120
Query: 826 LEVQEM 831
EVQ+M
Sbjct: 1121 AEVQQM 1126
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/387 (65%), Positives = 306/387 (79%), Gaps = 14/387 (3%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
EGE++ +NSELWHACAGPL+SLPP GS VVYFPQGHSEQVAAS ++ D IP+YPNLP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPS 73
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTP-SKQPTNYFCKTL 133
+LIC LHN T++AD ETDEVYAQMTLQP++ ++ LL +++G ++QP +FCKTL
Sbjct: 74 KLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDA--LLASDMGLKLNRQPNEFFCKTL 131
Query: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHL 193
TASDTSTHGGFSVPRRAAEK+FP LD+S QPP QEL+A+D++DN W FRHI+RGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHL 191
Query: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLX 253
LTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSDSMHIG+L
Sbjct: 192 LTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLA 251
Query: 254 XXXXXXSTNSRFTIFYNPR-ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 312
+ NS FTIFYNPR A+P+EFV+PLAKY KA+Y +VS+GMRFRM+FETEE VR
Sbjct: 252 AAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVR 310
Query: 313 RYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSSF 371
RY+GT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IEP LT F + P F
Sbjct: 311 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF 370
Query: 372 PLRLRRPWLSGPPSLYGLKDGDMSISS 398
RP SG P G+ D + + S
Sbjct: 371 ----FRPRFSGQP---GMPDDETDMES 390
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 108/186 (58%), Gaps = 14/186 (7%)
Query: 656 ADPQSNLPFGINVD----PSSLML-----QNGMQN-LRNIGNVNDSLSLPFSASNCDGVT 705
D +++L G NVD P +L+ Q +QN L N G V + + S S
Sbjct: 945 GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVR-TQ 1003
Query: 706 GTDFPLSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYD 765
P I+ V+++G L Q T+ KV K GS GRS+D++++ YD
Sbjct: 1004 SFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRGYD 1062
Query: 766 ELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSP 825
ELR +LARMFG+EGQLEDP T S W+LV+VD ENDILL+GDDPW+EFVN V IKILS
Sbjct: 1063 ELRHDLARMFGIEGQLEDPQT--SDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSS 1120
Query: 826 LEVQEM 831
EVQ+M
Sbjct: 1121 AEVQQM 1126
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/376 (61%), Positives = 287/376 (76%), Gaps = 9/376 (2%)
Query: 13 EEEGEKK-CLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPN 71
++ G +K +NSELWHACAGPLV LP +GS V YF QGHSEQVA ST R +PNYPN
Sbjct: 42 DQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPN 101
Query: 72 LPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT--PSKQPTNYF 129
LP QL+CQ+HN T+HAD ++DE+YAQM+LQP+ +++V+ +P + G SK PT +F
Sbjct: 102 LPSQLMCQVHNVTLHADKDSDEIYAQMSLQPV--HSERDVFPVP-DFGMLRGSKHPTEFF 158
Query: 130 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQP 189
CKTLTASDTSTHGGFSVPRRAAEK+FPPLDYS QPP QEL+ RDL++N W FRHI+RGQP
Sbjct: 159 CKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQP 218
Query: 190 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHI 249
KRHLLTTGWS+FV +KRL AGDSVLFI +EK+QL++G+RRANR QT +PSSVLS+DSMHI
Sbjct: 219 KRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHI 278
Query: 250 GLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEES 309
G+L + + F IFYNPRA P+EFVIPLAKY KA+ +++SVGMRF M+FETE+S
Sbjct: 279 GVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDS 338
Query: 310 SVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTFPM 366
RRY+GTI GISDLD +RWP S WR+++V WDE ++ RVS W+IE L FP
Sbjct: 339 GKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPS 398
Query: 367 YPSSFPLRLRRPWLSG 382
S +L + +G
Sbjct: 399 LTSGLKRQLHPSYFAG 414
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 10/113 (8%)
Query: 742 TFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREND 801
T+ KV K+GS GRS+D++ F Y+EL+S + MFGLEG L P + SGW+LV+VD E+D
Sbjct: 794 TYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQS--SGWKLVYVDYESD 851
Query: 802 ILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSVATSTSSPGHKLSNNGNSCD 854
+LL+GDDPW+EFV V I+ILSP EVQ+M S G KL N+ D
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM--------SEEGMKLLNSAGIND 896
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 264/375 (70%), Gaps = 8/375 (2%)
Query: 5 SSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDA 64
S+ ++ L+ E L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ +
Sbjct: 45 SAAAERALDPEA---ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQ 101
Query: 65 HIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQ 124
+P Y +LP +L+C++ N + A+A+TDEVYAQ+TL P + Q++ + A L P +
Sbjct: 102 QMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRF 159
Query: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHI 184
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DL+ NEW+FRHI
Sbjct: 160 QVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHI 219
Query: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSS 244
FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS
Sbjct: 220 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 279
Query: 245 DSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
SMH+G+L ST + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M F
Sbjct: 280 HSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRF 338
Query: 305 ETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364
E EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++EP
Sbjct: 339 EGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAP 398
Query: 365 P-MYPSSFPLRLRRP 378
P + P P R +RP
Sbjct: 399 PALSPVPMP-RPKRP 412
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 744 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 802
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 803 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 264/375 (70%), Gaps = 8/375 (2%)
Query: 5 SSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDA 64
S+ ++ L+ E L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ +
Sbjct: 45 SAAAERALDPEA---ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQ 101
Query: 65 HIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQ 124
+P Y +LP +L+C++ N + A+A+TDEVYAQ+TL P + Q++ + A L P +
Sbjct: 102 QMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRF 159
Query: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHI 184
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DL+ NEW+FRHI
Sbjct: 160 QVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHI 219
Query: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSS 244
FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS
Sbjct: 220 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 279
Query: 245 DSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
SMH+G+L ST + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M F
Sbjct: 280 HSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRF 338
Query: 305 ETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364
E EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++EP
Sbjct: 339 EGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAP 398
Query: 365 P-MYPSSFPLRLRRP 378
P + P P R +RP
Sbjct: 399 PALSPVPMP-RPKRP 412
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 744 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 802
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 803 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 264/375 (70%), Gaps = 8/375 (2%)
Query: 5 SSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDA 64
S+ ++ L+ E L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ +
Sbjct: 45 SAAAERALDPEA---ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQ 101
Query: 65 HIPNYPNLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQ 124
+P Y +LP +L+C++ N + A+A+TDEVYAQ+TL P + Q++ + A L P +
Sbjct: 102 QMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRF 159
Query: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHI 184
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DL+ NEW+FRHI
Sbjct: 160 QVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHI 219
Query: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSS 244
FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS
Sbjct: 220 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 279
Query: 245 DSMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
SMH+G+L ST + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M F
Sbjct: 280 HSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRF 338
Query: 305 ETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364
E EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++EP
Sbjct: 339 EGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAP 398
Query: 365 P-MYPSSFPLRLRRP 378
P + P P R +RP
Sbjct: 399 PALSPVPMP-RPKRP 412
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 744 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 802
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 803 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/360 (53%), Positives = 257/360 (71%), Gaps = 5/360 (1%)
Query: 20 CLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQ 79
L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ + +P Y +LP +L+C+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTS 139
+ N + A+A+TDEVYAQ+TL P + Q++ + A L P + + FCKTLTASDTS
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRFQVHSFCKTLTASDTS 174
Query: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWS 199
THGGFSV RR A++ PPLD S+QPP QEL+A+DL+ NEW+FRHIFRGQP+RHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXX 259
VFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 260 STNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTIT 319
ST + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI
Sbjct: 295 STGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 353
Query: 320 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSSFPLRLRRP 378
GI + D RWP S WRS+KV WDE+++ R RVS W++EP P + P P R +RP
Sbjct: 354 GIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP-RPKRP 412
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 744 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 802
KVHK G + GRS+D+SKF +Y+EL +EL R+F G+L M + W +V+ D END+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL---MAPKKDWLIVYTDEENDM 792
Query: 803 LLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
+L+GDDPWQEF V I I + EV++M
Sbjct: 793 MLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 257/375 (68%), Gaps = 7/375 (1%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
L ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ NLP +++C++
Sbjct: 19 LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77
Query: 81 HNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
N A+ ETDEVYAQ+TL P +Q E A + P K + FCKTLTASDTST
Sbjct: 78 INIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSV 200
HGGFSV RR A+ PPLD SQQPP QEL+A DL+++EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXXS 260
FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L +
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITG 320
T + F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314
Query: 321 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSSFPLRLRRP 378
+ + S W +S WRS+KV WDE ++ R RVS WE+EPL + P P R +RP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374
Query: 379 WLSGPPS-LYGLKDG 392
G PS G DG
Sbjct: 375 RPPGLPSPATGPSDG 389
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 45/195 (23%)
Query: 678 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 737
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 464 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 512
Query: 738 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 775
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 513 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 572
Query: 776 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 835
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 573 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 625
Query: 836 ATSTSSPGHKLSNNG 850
SP +KL+ N
Sbjct: 626 -----SPKNKLAVNA 635
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 254/367 (69%), Gaps = 6/367 (1%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
L ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ NLP +++C++
Sbjct: 19 LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77
Query: 81 HNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
N A+ ETDEVYAQ+TL P +Q E A + P K + FCKTLTASDTST
Sbjct: 78 INIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSV 200
HGGFSV RR A+ PPLD SQQPP QEL+A DL+++EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXXS 260
FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L +
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITG 320
T + F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314
Query: 321 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSSFPLRLRRP 378
+ + S W +S WRS+KV WDE ++ R RVS WE+EPL + P P R +RP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374
Query: 379 WLSGPPS 385
G PS
Sbjct: 375 RPPGLPS 381
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 45/195 (23%)
Query: 678 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 737
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 469 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 517
Query: 738 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 775
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 518 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 577
Query: 776 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 835
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 578 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 630
Query: 836 ATSTSSPGHKLSNNG 850
SP +KL+ N
Sbjct: 631 -----SPKNKLAVNA 640
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 254/367 (69%), Gaps = 6/367 (1%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
L ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ NLP +++C++
Sbjct: 19 LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77
Query: 81 HNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
N A+ ETDEVYAQ+TL P +Q E A + P K + FCKTLTASDTST
Sbjct: 78 INIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSV 200
HGGFSV RR A+ PPLD SQQPP QEL+A DL+++EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXXS 260
FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L +
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITG 320
T + F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314
Query: 321 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSSFPLRLRRP 378
+ + S W +S WRS+KV WDE ++ R RVS WE+EPL + P P R +RP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374
Query: 379 WLSGPPS 385
G PS
Sbjct: 375 RPPGLPS 381
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 45/195 (23%)
Query: 678 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 737
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 469 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 517
Query: 738 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 775
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 518 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 577
Query: 776 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 835
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 578 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 630
Query: 836 ATSTSSPGHKLSNNG 850
SP +KL+ N
Sbjct: 631 -----SPKNKLAVNA 640
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 254/367 (69%), Gaps = 6/367 (1%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
L ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ NLP +++C++
Sbjct: 19 LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77
Query: 81 HNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
N A+ ETDEVYAQ+TL P +Q E A + P K + FCKTLTASDTST
Sbjct: 78 INIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSV 200
HGGFSV RR A+ PPLD SQQPP QEL+A DL+++EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXXS 260
FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L +
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITG 320
T + F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314
Query: 321 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSSFPLRLRRP 378
+ + S W +S WRS+KV WDE ++ R RVS WE+EPL + P P R +RP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374
Query: 379 WLSGPPS 385
G PS
Sbjct: 375 RPPGLPS 381
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 45/195 (23%)
Query: 678 GMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSCVDESGFLQSSENVDQAN 737
G + + N+ NV++ FSA++ G D P+ SN +SG N++Q++
Sbjct: 466 GFELVENV-NVDEC----FSAASVSGAVAVDQPVPSNEF------DSGQQSEPLNINQSD 514
Query: 738 TPTGT---------------------FVKVHKSGS-FGRSLDISKFSSYDELRSELARMF 775
P+G+ KVH GS GR++D+++ Y++L +L MF
Sbjct: 515 IPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF 574
Query: 776 GLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSV 835
++G+L + WQ+V+ D E+D++++GDDPW EF V I I +P EV+++
Sbjct: 575 DIKGEL---LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL---- 627
Query: 836 ATSTSSPGHKLSNNG 850
SP +KL+ N
Sbjct: 628 -----SPKNKLAVNA 637
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/368 (52%), Positives = 244/368 (66%), Gaps = 13/368 (3%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
+ SELWHACAGPL LP G+ VVYFPQGH EQ A + IP + +L PQ++C++
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQIVCRV 119
Query: 81 HNETMHADAETDEVYAQMTLQPLSP-----QEQKEVYLLPAEL---GTPS-KQPTNYFCK 131
N + A+ +TDEVY Q+TL PL E KEV L E G+ S K+ + FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179
Query: 132 TLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKR 191
TLTASDTSTHGGFSVPRRAAE F PLDY QQ P+QELIA+DL+ EWKFRHI+RGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239
Query: 192 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGL 251
HLLTTGWS+FVS K LV+GD+VLF+ +E +L LGIRRA R + +P S++ +S +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298
Query: 252 LXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV 311
L ST S F +FY+PRA+ +EFVIP KY+ ++ + V +G RFRM FE ++S
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357
Query: 312 RRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSF 371
RR G +TG+ DLD RWPNS WR + V WDES + Q RVS WEI+P + P
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQS 417
Query: 372 PLRLRRPW 379
R +RPW
Sbjct: 418 SPRPKRPW 425
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 21/192 (10%)
Query: 643 PFPGREHSAYQGAADPQSNLPFGINVDPSSLMLQNGMQNLRNIGNVNDSLSLPFSASNCD 702
P+ ++ Q + P + FG + G+ N N + LPF
Sbjct: 576 PYQNPYNAGNQSSGPPSRAINFGEETRKFDAQNEGGLPN-------NVTADLPFKIDMMG 628
Query: 703 GVTGTDFPLSSNIAASSCVDESGFLQSSENVDQANTPTGT----FVKVHKSGS-FGRSLD 757
G++ N+ ASS GF E A+ P + KVHK GS GR++D
Sbjct: 629 KQKGSEL----NMNASSGCKLFGFSLPVET--PASKPQSSSKRICTKVHKQGSQVGRAID 682
Query: 758 ISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNV 817
+S+ + YD+L EL R+F +EG L DP GW++++ D END++++GDDPW +F N V
Sbjct: 683 LSRLNGYDDLLMELERLFNMEGLLRDP---EKGWRILYTDSENDMMVVGDDPWHDFCNVV 739
Query: 818 SYIKILSPLEVQ 829
I + + EV+
Sbjct: 740 WKIHLYTKEEVE 751
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 355 bits (912), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 242/350 (69%), Gaps = 8/350 (2%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREV-DAHIPNYPNLPPQLICQ 79
L +ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+ V D IP + NLPP+++C+
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTS 139
+ + T+ A+ ETDEVYAQ+TLQP ++Q E L L P+K + F K LTASDTS
Sbjct: 77 VLSVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTS 134
Query: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWS 199
THGGFSV R+ A + P LD +Q P QEL+ARDL+ EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 194
Query: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXX 259
FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+SS SM +G+L
Sbjct: 195 TFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAV 254
Query: 260 STNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTIT 319
+T + F +FY PR S+F+I + KY+ A+ + S+GMR+RM FE EES R + GTI
Sbjct: 255 TTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTII 311
Query: 320 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 369
G DL S +WP S WRS+++ WDE ++ +R +VS WEIEP + + P+
Sbjct: 312 GSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 711 LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRS 769
+ SNI+ S+ + +S + T T + +KV G+ GR++D++ SYDEL
Sbjct: 460 VDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIK 519
Query: 770 ELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 829
EL +MF +EG+L + + W +VF D E D +L+GDDPW EF + I EV+
Sbjct: 520 ELEKMFEIEGEL----SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 575
Query: 830 EM 831
+M
Sbjct: 576 KM 577
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 355 bits (911), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 242/350 (69%), Gaps = 8/350 (2%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR-EVDAHIPNYPNLPPQLICQ 79
L +ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+ VD IP + NLPP+++C+
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTS 139
+ + T+ A+ ETDEVYAQ+TLQP ++Q E L L P+K + F K LTASDTS
Sbjct: 98 VLSVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTS 155
Query: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWS 199
THGGFSV R+ A + P LD +Q P QEL+ARDL+ EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 156 THGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 215
Query: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXX 259
FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+SS SM +G+L
Sbjct: 216 TFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAV 275
Query: 260 STNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTIT 319
+T + F +FY PR S+F+I + KY+ A+ + S+GMR+RM FE EES R + GTI
Sbjct: 276 TTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTII 332
Query: 320 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 369
G DL S +WP S WRS+++ WDE ++ +R +VS WEIEP + + P+
Sbjct: 333 GSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 381
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 711 LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRS 769
+ SNI+ S+ + +S + T T + +KV G+ GR++D++ SYDEL
Sbjct: 481 VDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIK 540
Query: 770 ELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 829
EL +MF +EG+L + + W +VF D E D +L+GDDPW EF + I EV+
Sbjct: 541 ELEKMFEIEGEL----SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 596
Query: 830 EM 831
+M
Sbjct: 597 KM 598
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 240/348 (68%), Gaps = 9/348 (2%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAH-IPNYPNLPPQLICQ 79
L +ELW CAGPLV +P RV YFPQGH EQ+ ASTN+ +++ IP + +LPP+++C+
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTS 139
+ + T+ A+ ETDEVYAQ+TLQP ++Q E L + P+KQ + F K LTASDTS
Sbjct: 81 VLDVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTS 138
Query: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWS 199
THGGFSV R+ A + P LD +Q P QEL+ RDL+ EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 THGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWS 198
Query: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXX 259
FVS+KRLVAGD+ +F+ E L +G+RR R Q+ MP+SV+SS SMH+G+L
Sbjct: 199 TFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAV 258
Query: 260 STNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTIT 319
T + F +FY PR S+F++ + KY++A+ H S+G RFRM FE EES R + GTI
Sbjct: 259 RTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIV 315
Query: 320 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM 366
G DL S +WP S WRS++V WDE T +R +VS WEIEP L T P+
Sbjct: 316 GSGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPI 362
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 744 VKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDRENDI 802
KV G + GR++D++ SYDEL EL MF ++GQL R W +VF D E D+
Sbjct: 492 TKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQL----LARDKWIVVFTDDEGDM 547
Query: 803 LLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSVATSTSSPGHKLSNN 849
+L GDDPW EF I I S EV++M + S+S + N
Sbjct: 548 MLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLENEEYGNE 594
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/382 (47%), Positives = 244/382 (63%), Gaps = 22/382 (5%)
Query: 16 GEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75
G CL ELWHACAGPL+SLP GS V+YFPQGH EQ D Y LPP
Sbjct: 48 GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97
Query: 76 LICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVY--LLPAELGTPSKQPT------N 127
+ C++ + +HA+ TDEVYAQ++L P S +++V ++ + G + +
Sbjct: 98 VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157
Query: 128 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRG 187
FCKTLTASDTSTHGGFSVPRRAAE FPPLDYSQ P+QEL+ARDL+ EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217
Query: 188 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSM 247
QP+RHLLTTGWS FV+ K+LV+GD+VLF+ + +L LG+RRA++ + S + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277
Query: 248 HIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE 307
+ ST+S F+I YNP+AS S F+IP K++K V + +GMRF+ E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336
Query: 308 ESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTF 364
++S RR G I+GISDLD +RWP S WR + V WD+ A Q RVS WEIEP ++
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNS 396
Query: 365 PMYPSSFPLRLRRPWLSGPPSL 386
+ ++ P R R + SG P +
Sbjct: 397 GSFVTTGPKRSRIGFSSGKPDI 418
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 240/361 (66%), Gaps = 11/361 (3%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR-EVDAHIPNYPNLPPQLICQ 79
L ELW CAGPLV +P RV YFPQGH EQ+ AST + +++ P + LPP+++C
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPA--ELGTPSKQPTNYFCKTLTASD 137
+ N ++ A+ +TDEVYAQ+TL P+ + + + P+ EL P + F K LTASD
Sbjct: 68 VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK---VHSFSKVLTASD 124
Query: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTG 197
TSTHGGFSV R+ A + PPLD +QQ P QEL+A D++ +WKF+HIFRGQP+RHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 198 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXX 257
WS FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SMH+G+L
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 258 XXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGT 317
T + F ++Y PR S+F+I L KY++A+ + + SVGMRF+M FE E+S RRY GT
Sbjct: 245 ATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPERRYSGT 301
Query: 318 ITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLRR 377
+ G+ D S W +S WR ++V WDE + R +VS WEIEP P S L+ +R
Sbjct: 302 VIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKR 360
Query: 378 P 378
P
Sbjct: 361 P 361
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 740 TGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T + KV G GR++D++ Y+EL ++ ++F ++G+L R+ W++VF D
Sbjct: 520 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS----RNQWEIVFTDD 575
Query: 799 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
E D++L+GDDPW EF N V I I S EV++M
Sbjct: 576 EGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 327 bits (838), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 240/361 (66%), Gaps = 11/361 (3%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNR-EVDAHIPNYPNLPPQLICQ 79
L ELW CAGPLV +P RV YFPQGH EQ+ AST + +++ P + LPP+++C
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67
Query: 80 LHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPA--ELGTPSKQPTNYFCKTLTASD 137
+ N ++ A+ +TDEVYAQ+TL P+ + + + P+ EL P + F K LTASD
Sbjct: 68 VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK---VHSFSKVLTASD 124
Query: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTG 197
TSTHGGFSV R+ A + PPLD +QQ P QEL+A D++ +WKF+HIFRGQP+RHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 198 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXX 257
WS FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SMH+G+L
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 258 XXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGT 317
T + F ++Y PR S+F+I L KY++A+ + + SVGMRF+M FE E+S RRY GT
Sbjct: 245 ATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPERRYSGT 301
Query: 318 ITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLRR 377
+ G+ D S W +S WR ++V WDE + R +VS WEIEP P S L+ +R
Sbjct: 302 VIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKR 360
Query: 378 P 378
P
Sbjct: 361 P 361
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 740 TGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T + KV G GR++D++ Y+EL ++ ++F ++G+L R+ W++VF D
Sbjct: 522 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS----RNQWEIVFTDD 577
Query: 799 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
E D++L+GDDPW EF N V I I S EV++M
Sbjct: 578 EGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 234/396 (59%), Gaps = 21/396 (5%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G V YFPQG+ E V AST E++ P +LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE+YA++TL P + Q ++P + + N F K LT
Sbjct: 77 KLQCRVIAIHLKVENNSDEIYAEITLMPDTTQ-----VVIPTQSENRFRPLVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS +GGFSVP++ A + PPLD SQ PAQE++A DL+DN+W+FRH +RG P+RH L
Sbjct: 132 ASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSL 191
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXX 254
TTGW+ F+++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 192 TTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 251
Query: 255 XXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
F + Y PR+ S+F++ K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 252 AKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 308
Query: 315 VGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPL- 373
GTI G+SD S W S WRS++V WDE + R +VS WEIE L P S L
Sbjct: 309 FGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLLK 367
Query: 374 --RLRRPWLSG-------PPSL-YGLKDGDMSISSP 399
RLR G PP L G + G +S++SP
Sbjct: 368 NKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVASP 403
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 742 TFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREN 800
T KV G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D +
Sbjct: 512 TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT----RNQWKIAFTDSDG 567
Query: 801 DILLLGDDPWQEFVNNVSYIKILSPLEVQ 829
+L+GDDPW EF V I I S EV+
Sbjct: 568 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 217/363 (59%), Gaps = 10/363 (2%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G +V YFPQGH E V ST E++ P +LP
Sbjct: 18 DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE YA++TL P + Q ++P + + N F K LT
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS HGGF VP++ A + P LD SQ PAQEL+A DL+ N+W+F H +RG P+RHLL
Sbjct: 132 ASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLL 191
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXX 254
TTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 192 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVAS 251
Query: 255 XXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
FT+ Y PR+ S+F++ K++ AV + + +VG RF M E ++ S RR
Sbjct: 252 AKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRC 308
Query: 315 VGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLR 374
GTI G+SD S W S WRS++V WDE T+ +VS W+IE L P SF L+
Sbjct: 309 FGTIIGVSDF-SPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRSFLLK 367
Query: 375 LRR 377
+R
Sbjct: 368 NKR 370
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 742 TFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREN 800
T KV G + GR++D+S + YD+L EL ++F ++GQL+ R+ W++ F D +
Sbjct: 512 TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT----RNQWEIAFTDSDE 567
Query: 801 DILLLGDDPWQEFVNNVSYIKI 822
D +L+GDDPW EF N V I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 211/348 (60%), Gaps = 10/348 (2%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G +V YFPQGH E V AST E++ P + P
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE YA++TL P + Q ++P + + N F K LT
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNQNQFRPLVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS HGGFSVP++ A + PPLD SQ P QE++A DL+ N+W+FRHI+RG +RHLL
Sbjct: 132 ASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLL 191
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXX 254
T GW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 192 TIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIAS 251
Query: 255 XXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
F + Y PR+ S+F++ K++ V + + +VG RF M FE ++ S RR
Sbjct: 252 AKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERRS 308
Query: 315 VGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 362
GTI G+SD S W S WRS++V WDE + R +VS W+IE LT
Sbjct: 309 FGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 740 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F +
Sbjct: 509 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ----ARNQWEIAFTNN 564
Query: 799 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
E D +L+G+DPW EF N V I I S EV+ +
Sbjct: 565 EEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 228/393 (58%), Gaps = 16/393 (4%)
Query: 18 KKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLI 77
K + +LW CAGPL +P +G +V YFPQG+ E V AST E++ P +LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79
Query: 78 CQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASD 137
C++ + + +DE YA++TL P + + ++P + + N F K LTASD
Sbjct: 80 CRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASD 139
Query: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTG 197
S +G FSVP++ A + PPLD SQ PAQEL+A DL+ N+W FRH +RG P+RHLLTTG
Sbjct: 140 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 199
Query: 198 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXX 257
W+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 200 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 259
Query: 258 XXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGT 317
F + Y PR+ S+F++ K++ AV + + +VG RF M FE ++ S RRY GT
Sbjct: 260 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGT 316
Query: 318 ITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPL---R 374
I G+S+ S W S WRS++V WDE + R +VS WEIE L P S L R
Sbjct: 317 IIGVSNF-SPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSSFLKNKR 375
Query: 375 LRRPWLSG-------PPSL-YGLKDGDMSISSP 399
LR G PP L G + G +S++SP
Sbjct: 376 LREVNEFGSSSSHLLPPILTQGQEIGQLSVASP 408
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 740 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W+++F
Sbjct: 515 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT----RNQWKIIFTGS 570
Query: 799 ENDILLLGDDPWQEFVNNVSYIKI 822
+ D +L+GDDPW EF N V I I
Sbjct: 571 DEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 276 bits (706), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 224/385 (58%), Gaps = 15/385 (3%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G V YFPQG+ E V AST E++ P +LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE YA++TL P + Q ++P + + N F K LT
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQSENQFRPLVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS +GGF VP++ A + PPL PAQEL+A+DL+ N+W+FRH +RG P+RH L
Sbjct: 132 ASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSL 187
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXX 254
TTGW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 188 TTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 247
Query: 255 XXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
F + Y P S+F++ K++ A+ + + VG RF M FE ++ S RRY
Sbjct: 248 AKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRY 306
Query: 315 VGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLR 374
GTI G++D S W S WRS++V WDE + R +VS WEIE L + P S L+
Sbjct: 307 FGTIIGVNDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLLK 365
Query: 375 LRRPWLSGPPSLYGLKDGDMSISSP 399
+R + +G + G +S++SP
Sbjct: 366 NKR---LREVNEFGQEIGQLSVASP 387
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 740 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T T KV G + GR++D+S + YD+L EL ++F L+GQL+ R+ W++ F D
Sbjct: 494 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT----RNQWKIAFTDS 549
Query: 799 ENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 829
+ +L+GDDPW EF V I I S EV+
Sbjct: 550 DGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 217/377 (57%), Gaps = 23/377 (6%)
Query: 11 QLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYP 70
+L + K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI
Sbjct: 12 ELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIF 70
Query: 71 NLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYF- 129
+LP +L C++ D TDEVYAQ++L P + EV + T ++P YF
Sbjct: 71 DLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDT--RRPIVYFF 124
Query: 130 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQP 189
K LTASD S GG +P++ A + FPPLD SQ Q L+A+DL EW F+H+FRG P
Sbjct: 125 SKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTP 184
Query: 190 KRHLLTT--GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSM 247
+RH+ T+ GWSVF + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M
Sbjct: 185 QRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCM 244
Query: 248 HIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE 307
G++ T F + Y P S S+FVI K+V A+ + + VG RFRM FE +
Sbjct: 245 QHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGK 301
Query: 308 ESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 367
+ S +RY GTI G++D+ S W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 302 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI----- 355
Query: 368 PSS----FPLRLRRPWL 380
PSS L+ ++ WL
Sbjct: 356 PSSDISQSSLKKKKHWL 372
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 216/399 (54%), Gaps = 64/399 (16%)
Query: 17 EKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIP---NYPNLP 73
++K L+ +LWHACAG +V +P + S V YF QGH+E AH P + P +P
Sbjct: 3 QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEH----------AHAPPDFHAPRVP 52
Query: 74 PQLICQLHNETMHADAETDEVYAQMTLQPLSPQ----EQKEVYLL--PAELGTPS-KQPT 126
P ++C++ + ADAETDEV+A++TL PL E V L P+ G + K+
Sbjct: 53 PLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKP 112
Query: 127 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFR 186
F KTLT SD + GGFSVPR AE +FP LDYS +PP Q +IA+D++ WKFRHI+R
Sbjct: 113 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYR 172
Query: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDS 246
G P+RHLLTTGWS FV+ K+L+AGDS++F+ +E L +GIRRA R S SD+
Sbjct: 173 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL---GSNAGSDN 229
Query: 247 MHIGLLXXXXXXXSTNSR---------------------------------------FTI 267
+ G ST + F +
Sbjct: 230 PYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEV 289
Query: 268 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYVGTITGISDLDS 326
Y PRAS EF + A V++ R GMRF+M FETE+SS + ++GT++ + D
Sbjct: 290 VYYPRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADP 348
Query: 327 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
+RWPNS WR ++V WDE + RVS W +E ++ P
Sbjct: 349 IRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 387
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 212/347 (61%), Gaps = 12/347 (3%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G ++ YFPQG+ E V AST E++ P +LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE YA++TL P + Q ++P + + N F K LT
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS GGF VP++ A + PPLD SQ P QEL+A DL+ N+W+F H +RG P+RHLL
Sbjct: 132 ASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLL 189
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXX 254
TTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 190 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIAS 249
Query: 255 XXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
F + Y PR+ S+F++ K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 250 AKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 306
Query: 315 VGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 361
GTI G+SD S W S WR+++V WDE + R +VS WEIE L
Sbjct: 307 FGTIIGVSDF-SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 352
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 740 TGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDR 798
T T KV G + R++D+S + YD+L EL +F L+GQL+ R+ W++ F D
Sbjct: 508 TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQT----RNQWEIAFTDS 563
Query: 799 ENDILLLGDDPWQEFVNNVSYIKILS----PLEVQ 829
++D +L+GDDPW EF N V I I LEVQ
Sbjct: 564 DDDKMLVGDDPWPEFCNMVKKILIFKRGGQKLEVQ 598
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 262 bits (669), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 214/394 (54%), Gaps = 53/394 (13%)
Query: 16 GEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75
G +K L+ +LWHACAG +V +PP+ S+V YFPQGH+E + N P +PP
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63
Query: 76 LICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT---PSKQPTNYFCKT 132
++C++ ADAE+DEV+A++ L PL E + E + + T F KT
Sbjct: 64 VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKT 123
Query: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRH 192
LT SD + GGFSVPR AE +FP LDY+ +PP Q ++A+D++ + WKFRHI+RG P+RH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH 183
Query: 193 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR----------------SQTI 236
LLTTGWS FV+ K+LVAGDS++F+ E L +GIRRA R +
Sbjct: 184 LLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSC 243
Query: 237 MPSSVLSSD-----------------SMHIGLLXXXXXXXSTNSRFTIFYNPRASPSEFV 279
SS+L D + + + F + Y PRAS SEF
Sbjct: 244 GYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFC 303
Query: 280 IPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYVGTITGISDLDSVRWPNSHWRSVK 338
+ A +A GMRF+M FETE+SS + ++GT++ ++ D +RWPNS WR ++
Sbjct: 304 VK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQ 362
Query: 339 VGWDESTAGERQPRVSLWEIE--------PLTTF 364
V WDE + RV+ W +E PLT+F
Sbjct: 363 VAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSF 396
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 182/273 (66%), Gaps = 4/273 (1%)
Query: 97 QMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP 156
+ TL+ Q++ E L L P+K + F K LTASDTSTHGGFSV R+ A + P
Sbjct: 5 RFTLRSHYNQKKIEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLP 64
Query: 157 PLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI 216
LD +Q P QEL+ARDL+ EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+
Sbjct: 65 SLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL 124
Query: 217 WNEKNQLLLGIRRANRSQTIMPSSVLSSDSMHIGLLXXXXXXXSTNSRFTIFYNPRASPS 276
E L +G+RR + Q+ MP+SV+SS SM +G+L +T + F +FY PR S
Sbjct: 125 RGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--S 182
Query: 277 EFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRS 336
+F+I + KY+ A+ + S+GMR+RM FE EES R + GTI G DL S +WP S WRS
Sbjct: 183 QFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRS 240
Query: 337 VKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 369
+++ WDE ++ +R +VS WEIEP + + P+
Sbjct: 241 LQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 273
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 711 LSSNIAASSCVDESGFLQSSENVDQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRS 769
+ SNI+ S+ + +S + T T + +KV G+ GR++D++ SYDEL
Sbjct: 373 VDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIK 432
Query: 770 ELARMFGLEGQLEDPMTLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQ 829
EL +MF +EG+L + + W +VF D E D +L+GDDPW EF + I EV+
Sbjct: 433 ELEKMFEIEGEL----SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVK 488
Query: 830 EM 831
+M
Sbjct: 489 KM 490
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 200/377 (53%), Gaps = 49/377 (12%)
Query: 11 QLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYP 70
+L + K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI
Sbjct: 12 ELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIF 70
Query: 71 NLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYF- 129
+LP +L C++ D TDEVYAQ++L P + EV + T ++P YF
Sbjct: 71 DLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDT--RRPIVYFF 124
Query: 130 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQP 189
K LTASD S GG +P++ A + FPPLD SQ Q L+A+DL EW F+H+FRG P
Sbjct: 125 SKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTP 184
Query: 190 KRHLLTT--GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSM 247
+RH+ T+ GWSVF + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M
Sbjct: 185 QRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCM 244
Query: 248 HIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE 307
G++ T F + Y P RM FE +
Sbjct: 245 QHGVIASVVNAFKTKCMFNVVYKP-----------------------------RMQFEGK 275
Query: 308 ESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 367
+ S +RY GTI G++D+ S W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI----- 329
Query: 368 PSS----FPLRLRRPWL 380
PSS L+ ++ WL
Sbjct: 330 PSSDISQSSLKKKKHWL 346
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 200/377 (53%), Gaps = 49/377 (12%)
Query: 11 QLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYP 70
+L + K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI
Sbjct: 12 ELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIF 70
Query: 71 NLPPQLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYF- 129
+LP +L C++ D TDEVYAQ++L P + EV + T ++P YF
Sbjct: 71 DLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDT--RRPIVYFF 124
Query: 130 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQP 189
K LTASD S GG +P++ A + FPPLD SQ Q L+A+DL EW F+H+FRG P
Sbjct: 125 SKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTP 184
Query: 190 KRHLLTT--GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSSVLSSDSM 247
+RH+ T+ GWSVF + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M
Sbjct: 185 QRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCM 244
Query: 248 HIGLLXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE 307
G++ T F + Y P RM FE +
Sbjct: 245 QHGVIASVVNAFKTKCMFNVVYKP-----------------------------RMQFEGK 275
Query: 308 ESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 367
+ S +RY GTI G++D+ S W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI----- 329
Query: 368 PSS----FPLRLRRPWL 380
PSS L+ ++ WL
Sbjct: 330 PSSDISQSSLKKKKHWL 346
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 743 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREND 801
KVH G + R++D++ Y++L +L +F L+D + R+ W++VF + E
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELF----DLKDELRTRNQWEIVFTNNEGA 490
Query: 802 ILLLGDDPWQEFVNNVSYIKILSPLEVQEM 831
+L+GDDPW EF N I I S E+++M
Sbjct: 491 EMLVGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 184/373 (49%), Gaps = 45/373 (12%)
Query: 21 LNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
++ +W ACAG V +P + SRV YFPQGH E + + +P+ + P +I +
Sbjct: 16 VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCP-----LLSTLPSSTSPVPCIITSI 70
Query: 81 HNETMHADAETDEVYAQMTLQPLS-----PQEQKEVYLLPAELGTPSKQPTNYFCKTLTA 135
+ AD TDEV+A + LQP++ P ++ +K T F K LT
Sbjct: 71 Q---LLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT--FAKILTP 125
Query: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLT 195
SD + GGFSVPR A+ VFP L++ PP Q+L D++ W FRHI+RG P+RHLLT
Sbjct: 126 SDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLT 185
Query: 196 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA---------------NRSQTIMPSS 240
TGWS FV++K+L+AGDSV+F+ +++ +G+RR + SS
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSS 245
Query: 241 VLSSDSMHI---------GLLXXXXXXXSTNSR-----FTIFYNPRASPSEFVIPLAKYV 286
V D G L + N F + + P A SEFV+ A+ V
Sbjct: 246 VAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAEDV 304
Query: 287 KAVYHTRVSVGMRFRMLFETEESSVRRYVGTITGISDLDSVRWPNSHWRSVKVGWDESTA 346
++ + G R +M ETE+SS + I + ++ W S W+ +++ WDE
Sbjct: 305 ESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEI 364
Query: 347 GERQPRVSLWEIE 359
+ RV+ W++E
Sbjct: 365 LQNVKRVNPWQVE 377
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 129/214 (60%), Gaps = 9/214 (4%)
Query: 15 EGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPP 74
+G K + +LW CAGPL +P +G +V YFPQGH E V AST E++ PN +LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPS 76
Query: 75 QLICQLHNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLT 134
+L C++ + + +DE Y ++TL P + Q ++P E + N F K LT
Sbjct: 77 KLQCRVIAIHLKVENNSDETYVEITLMPDTTQ-----VVIPTENENQFRPIVNSFTKVLT 131
Query: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLL 194
ASDTS G FSVP + A + PPLD SQ PAQELIA DL+ N+W+F+H +R P+
Sbjct: 132 ASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD-- 188
Query: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 228
TTGW+ F ++K+LV GD ++F E +L +GIR
Sbjct: 189 TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 106 QEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPP 165
QE KE P E + S + + F K +T SD +P++ AE+ FP LD S
Sbjct: 3 QEDKEK---PIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTND 58
Query: 166 AQELIARDLND---NEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EK 220
+ + + + D N W+FR+ + + +++T GWS FV K+L AGD V F + K
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNK 118
Query: 221 NQLLLGIRR 229
++L + RR
Sbjct: 119 DKLYIDWRR 127
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 743 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 790
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 791 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 743 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 790
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 791 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 743 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF--------GLEGQLEDPMTLRSG--- 790
F+KV+ G + GR +D++ SSY+ L L MF GL Q P+ L G
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 791 WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
+ L + D+E D +L+GD PW+ F+N+V ++++ E
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWK 180
P + + F K +T SD +P++ AE+ FP LD S L +D N W+
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
FR+ + + +++T GWS FV K+L AGD V F
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 141
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 116 AELGTPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPP 165
AE+ S TNYF K LT SD +P++ AE FP L+ +Q
Sbjct: 13 AEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQN-- 69
Query: 166 AQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
L +D N W+FR+ + + +++T GWS FV K+L AGD+V F
Sbjct: 70 GTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDYSQQPPAQELIA-RDLNDNEWKFRHIFR 186
F KT+T SD +P+ AEK FP PL + L+ D+N W+FR+ +
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
+ ++LT GWS FV KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQ 188
F K +T SD +P++ AE+ FP LD S L DL W+FR+ +
Sbjct: 35 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93
Query: 189 PKRHLLTTGWSVFVSAKRLVAGDSVLF 215
+ +++T GWS FV K+L AGD V F
Sbjct: 94 SQSYVMTKGWSRFVKDKKLDAGDIVSF 120
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 743 FVKVHKSG-SFGRSLDISKFSSYDELRSELARMF-GLEG----QLEDPMTLRSG---WQL 793
FVKV+ G GR +D+ SSY+ L L MF G+ G + P+ L G + L
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185
Query: 794 VFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
+ D+E D +L+GD PW+ F+N+V ++I+ E
Sbjct: 186 TYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSE 219
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 124 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL----------DYSQQPPAQELIARD 173
Q + F K+LT SD +P++ AEK FP D + L D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 174 LNDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 229
+ WKFR+ + + ++LT GWS +V K L AGD V F + + ++L +G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNEWKFRHIFRGQ 188
F K +T SD +P+ AEK FP + L D+N W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 189 PKRHLLTTGWSVFVSAKRLVAGDSVLF 215
+ ++LT GWS FV K L AGD V F
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSF 274
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 124 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL----------DYSQQPPAQELIARD 173
Q + F K+LT SD +P++ AEK FP D + L D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 174 LNDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 229
+ WKFR+ + + ++LT GWS +V K L AGD V F + + ++L +G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLNDNE---WKFRHIF 185
F K LT SD +P++ AE+ FP L + ++ + D E W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 186 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 229
+ ++LT GWS +V K L AGD VLF + + + +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIA-RDLNDNEWKFRHIFRG 187
F K +T SD +P++ AEK FP S LI D+N W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 188 QPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
+ ++LT GWS FV K L AGD V F
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIA-RDLNDNEWKFRHIFRG 187
F K +T SD +P++ AEK FP S LI D+N W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 188 QPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
+ ++LT GWS FV K L AGD V F
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 15/103 (14%)
Query: 741 GTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMF-GL--------EGQLEDP-----M 785
G FVK++ G GR +D++ ++SY++L + ++F GL +GQ E+ +
Sbjct: 151 GMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLL 210
Query: 786 TLRSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEV 828
+ + L + D E D +L+GD PWQ FV++V ++++ E+
Sbjct: 211 DGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFP------PLDYSQQPPAQELI-ARDLNDNEWKF 181
F KT+T SD +P++ AEK FP + + P LI D W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 182 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 215
R+ + + ++LT GWS FV K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDYSQQPPAQELIARDLNDNEW 179
F K+LT SD +P++ AEK FP D S L D + W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 180 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 229
+FR+ + + ++LT GWS FV K+L GD V F + + +L +G RR
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIA--RDLNDNEWKFRHIFR 186
F K LT SD +P++ AE+ FP + + L+ D W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 229
+ ++LT GWS +V K L AGD VLF + + + +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDYSQQPPAQELIARDLNDNEW 179
F K+LT SD +P++ AEK FP D S L D + W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 180 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 229
+FR+ + + ++LT GWS FV K+L GD V F + + +L +G RR
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 741 GTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMF-GLEG---------QLEDPMT-LR 788
G FVK++ G GR +D+S +SY++L + ++F GL + E P+T L
Sbjct: 149 GMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLL 208
Query: 789 SG---WQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEV 828
G + L + D E D +L+GD PWQ FV++V ++++ E+
Sbjct: 209 DGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 740 TGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFG---LEGQLEDPMTLRSGWQLVF 795
T FVKV+ G GR LD+ FS Y+ L L+ MF + G + R L +
Sbjct: 71 TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRD-----RKHHVLTY 125
Query: 796 VDRENDILLLGDDPWQEFVNNVSYIKILSP 825
D++ D +++GD PW F+ V +KI P
Sbjct: 126 EDKDGDWMMVGDIPWDMFLETVRRLKITRP 155
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 734 DQANTPTGTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMF----------GLEGQLE 782
D FVKV G GR +D++ Y+ L + L MF +G +E
Sbjct: 129 DSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHME 188
Query: 783 DPMTL----RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
P+ + SG L + D+E D +L+GD PW F+ +V ++I+ E
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 50.1 bits (118), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 734 DQANTPTGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF----------GLEGQLE 782
D FVKV G GR +D++ Y+ L + L MF +G +E
Sbjct: 129 DSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHME 188
Query: 783 DPMTL----RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLEVQEMG 832
P+ + SG L + D+E D +L+GD PW F+ +V ++I+ E G
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKG 242
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 734 DQANTPTGTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMF----------GLEGQLE 782
D FVKV G GR +D++ Y+ L + L MF +G +E
Sbjct: 129 DSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHME 188
Query: 783 DPMTL----RSGWQLVFVDRENDILLLGDDPWQEFVNNVSYIKILSPLE 827
P+ + SG L + D+E D +L+GD PW F+ +V ++I+ E
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237