Miyakogusa Predicted Gene
- Lj2g3v3059750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3059750.1 Non Chatacterized Hit- tr|I1M731|I1M731_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28135
PE,79.93,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; no descripti,CUFF.39699.1
(580 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 665 0.0
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 649 0.0
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 484 e-137
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 484 e-137
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 457 e-129
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 296 3e-80
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 273 2e-73
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 266 3e-71
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 260 2e-69
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 260 2e-69
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 260 2e-69
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 259 3e-69
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 258 8e-69
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 258 1e-68
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 253 3e-67
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 251 1e-66
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 249 3e-66
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 248 7e-66
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 245 5e-65
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 241 7e-64
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 240 3e-63
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 239 6e-63
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 233 3e-61
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 224 9e-59
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 221 2e-57
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 220 2e-57
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 219 4e-57
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 219 4e-57
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 217 2e-56
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 215 7e-56
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 215 7e-56
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 214 1e-55
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 2e-55
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 214 2e-55
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 214 2e-55
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 213 4e-55
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 213 4e-55
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 213 4e-55
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 211 1e-54
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 210 2e-54
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 210 2e-54
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 209 5e-54
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 208 1e-53
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 206 3e-53
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 201 8e-52
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 196 3e-50
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 194 1e-49
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 191 1e-48
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 181 9e-46
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 181 9e-46
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 181 2e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 180 3e-45
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 180 3e-45
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 4e-45
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 179 4e-45
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 175 8e-44
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 170 2e-42
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 170 2e-42
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 162 7e-40
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 162 7e-40
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 162 8e-40
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 160 2e-39
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 154 2e-37
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 154 2e-37
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 152 5e-37
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 149 4e-36
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 148 8e-36
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 148 8e-36
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 144 1e-34
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 144 1e-34
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 137 1e-32
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 122 1e-27
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 89 8e-18
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 73 6e-13
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 65 1e-10
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 65 1e-10
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 62 8e-10
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 4e-07
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 53 5e-07
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 53 8e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 51 2e-06
AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079 FO... 51 2e-06
AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60... 51 2e-06
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 50 4e-06
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 50 4e-06
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 49 8e-06
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/483 (66%), Positives = 392/483 (81%), Gaps = 25/483 (5%)
Query: 1 MITAILRRACSALSRRG-AATFIAASTV-------------------TGELRQ-LPVVAR 39
MIT +LRR+ S+R +A+ + +TV + +++ P
Sbjct: 1 MITTVLRRSLLDASKRNLSASLTSINTVLFHNLAPAATRVSDLALIGSSDVKAGFPFGVE 60
Query: 40 ARHFHSNPVPLQFRASLPSLAEFAVADFPY----EEGSKNDEGLEIKKLGISEEIVSALA 95
A+ H PL FRAS+ S A FA+++ + S +GL I +LGIS EIV AL+
Sbjct: 61 AKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISPEIVKALS 120
Query: 96 KKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPL 155
KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI DKIIK+NAKHGRGR+PL
Sbjct: 121 SKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPL 180
Query: 156 ALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDL 215
L LAPTRELA+QVEKEF +SAP+LDTIC+YGGTPI QQMRQLDYGVDV VGTPGR+IDL
Sbjct: 181 CLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDL 240
Query: 216 LNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTR 275
+ RGALNL EVQF+VLDEADQMLQ+GF EDVE IL++LP KRQ++MFSATMP I+ LT+
Sbjct: 241 MKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTK 300
Query: 276 KYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKR 335
KYLNNP+T+DLVGDSDQKLADGI+ YSI+ DSY + I+ PL+TEHAKGGKCIVFTQTKR
Sbjct: 301 KYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKR 360
Query: 336 DADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLV 395
DADRLS+++++S KCEALHGDISQ+QRERTLAGFR+GHFN+LVATDVA+RGLD+PNVDL+
Sbjct: 361 DADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLI 420
Query: 396 IHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVD 455
IHY+LPNN+E FVHR+GRTGRAGKKG+AIL++++DQSRA++ IER+VGS+F ELP IAV+
Sbjct: 421 IHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIAVE 480
Query: 456 RAS 458
R S
Sbjct: 481 RGS 483
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/497 (64%), Positives = 385/497 (77%), Gaps = 41/497 (8%)
Query: 1 MITAILRRACSALSRRGAATFI-------------AASTVTG------ELRQLPVVA--- 38
MI+ +LRR+ SRR A + AA+TV+ ++ LP +
Sbjct: 1 MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPF 60
Query: 39 --RARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEG---------------LEI 81
+ R FH VP +FR+S+ S A FA + Y +ND G L I
Sbjct: 61 GVKVRDFHVKSVPSEFRSSIVSSAGFAAQE--YAPSYENDGGIGDSESVGSSGGGDGLAI 118
Query: 82 KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKI 141
LGIS EIV AL +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI DKI
Sbjct: 119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 178
Query: 142 IKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYG 201
IKFNAKHGRG++P L LAPTRELA+QVEKEF +SAP+LDTIC+YGGTPI QQMR+L+YG
Sbjct: 179 IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYG 238
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLM 261
+DV VGTPGRIIDL+ RGALNL EVQF+VLDEADQMLQ+GF EDVE IL +LP KRQ++M
Sbjct: 239 IDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMM 298
Query: 262 FSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEH 321
FSATMP I+ LT+KYLNNP+TIDLVGDSDQKLADGI++YSI DSY + I+ PL+ EH
Sbjct: 299 FSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEH 358
Query: 322 AKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATD 381
KGGKCIVFTQTKRDADRL+ ++KS KCEALHGDISQAQRERTLAGFR+G+F++LVATD
Sbjct: 359 GKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATD 418
Query: 382 VASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERD 441
VA+RGLD+PNVDLVIHY+LPNN+E FVHR+GRTGRAGKKG+AIL+H +DQ+RA++ IE++
Sbjct: 419 VAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKE 478
Query: 442 VGSKFKELPKIAVDRAS 458
VGS+F ELP IAV+R S
Sbjct: 479 VGSRFNELPSIAVERGS 495
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/433 (58%), Positives = 315/433 (72%), Gaps = 19/433 (4%)
Query: 34 LPVVARARHFHSNPVPLQFRASLPS--LAEFAVADF------PYE-EGSKND------EG 78
L +V R R HS+ + + + P+ L+E A Y+ +G N+ E
Sbjct: 42 LSLVRRTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE 101
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
L I KL + + + +L K+GI+ LFPIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI
Sbjct: 102 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 161
Query: 139 DKIIK----FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQ 194
++ + + A GR P L LAPTRELAKQVEKE +SAP L T+CVYGG + Q
Sbjct: 162 KRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQ 221
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
L GVDVVVGTPGRIIDL+ +L L EV+++VLDEADQML +GF+E VE IL+ LP
Sbjct: 222 QSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP 281
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
KRQ+++FSATMP +K+L RKYL+NP+ IDLVGD D+KLA+GI LY+I T S K+ IL
Sbjct: 282 TKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 341
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHF 374
+ LIT +AKGGK IVFTQTKRDAD +S ++S S+ EALHGDISQ QRERTL FR+G F
Sbjct: 342 SDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKF 401
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRA 434
VLVATDVASRGLDIPNVDLVIHY+LPN+ E FVHRSGRTGRAGK+G+AIL+HT Q R
Sbjct: 402 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRT 461
Query: 435 IRTIERDVGSKFK 447
+R++ERDVG F+
Sbjct: 462 VRSLERDVGCHFE 474
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/433 (58%), Positives = 315/433 (72%), Gaps = 19/433 (4%)
Query: 34 LPVVARARHFHSNPVPLQFRASLPS--LAEFAVADF------PYE-EGSKND------EG 78
L +V R R HS+ + + + P+ L+E A Y+ +G N+ E
Sbjct: 42 LSLVRRTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE 101
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
L I KL + + + +L K+GI+ LFPIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI
Sbjct: 102 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 161
Query: 139 DKIIK----FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQ 194
++ + + A GR P L LAPTRELAKQVEKE +SAP L T+CVYGG + Q
Sbjct: 162 KRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQ 221
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
L GVDVVVGTPGRIIDL+ +L L EV+++VLDEADQML +GF+E VE IL+ LP
Sbjct: 222 QSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP 281
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
KRQ+++FSATMP +K+L RKYL+NP+ IDLVGD D+KLA+GI LY+I T S K+ IL
Sbjct: 282 TKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 341
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHF 374
+ LIT +AKGGK IVFTQTKRDAD +S ++S S+ EALHGDISQ QRERTL FR+G F
Sbjct: 342 SDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKF 401
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRA 434
VLVATDVASRGLDIPNVDLVIHY+LPN+ E FVHRSGRTGRAGK+G+AIL+HT Q R
Sbjct: 402 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRT 461
Query: 435 IRTIERDVGSKFK 447
+R++ERDVG F+
Sbjct: 462 VRSLERDVGCHFE 474
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/345 (65%), Positives = 272/345 (78%), Gaps = 4/345 (1%)
Query: 107 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK----FNAKHGRGRDPLALALAPT 162
RAVL PA+QGRD+I RA+TGTGKTLAFGIPI ++ + + A GR P L LAPT
Sbjct: 37 RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96
Query: 163 RELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALN 222
RELAKQVEKE +SAP L T+CVYGG + Q L GVDVVVGTPGRIIDL+ +L
Sbjct: 97 RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156
Query: 223 LKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPV 282
L EV+++VLDEADQML +GF+E VE IL+ LP KRQ+++FSATMP +K+L RKYL+NP+
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216
Query: 283 TIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSH 342
IDLVGD D+KLA+GI LY+I T S K+ IL+ LIT +AKGGK IVFTQTKRDAD +S
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276
Query: 343 SMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPN 402
++S S+ EALHGDISQ QRERTL FR+G F VLVATDVASRGLDIPNVDLVIHY+LPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 403 NSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFK 447
+ E FVHRSGRTGRAGK+G+AIL+HT Q R +R++ERDVG F+
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFE 381
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 232/378 (61%), Gaps = 13/378 (3%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
+ K IS + L GI LFPIQ + + + G D++GRARTG GKTLAF +PI +
Sbjct: 98 VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILES 157
Query: 141 II----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQ 194
++ K K G GR P L L PTRELAKQV +F Y + L + C+YGG Q
Sbjct: 158 LVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQ 217
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL- 253
+L GVD+VVGTPGRI D + R L+ +QF VLDEAD+ML++GF EDVE IL ++
Sbjct: 218 EGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVE 277
Query: 254 -PPKRQTLMFSATMPYEIKQLTRKYLN-NPVTIDLVGDSDQKLADGISLYSIVTDSYVKQ 311
K QTL+FSAT+P +K ++ ++L + TIDLVG+ K ++ + +I +
Sbjct: 278 DSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMA 337
Query: 312 GILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFRE 371
++ +I+ ++ GG+ I+F +TK LS + S ALHG+I Q+QRE TLAGFR
Sbjct: 338 RLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS---RALHGEIPQSQREVTLAGFRN 394
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQ 431
G F LVAT+VA+RGLDI +V L+I + P E ++HRSGRTGRAG G A+ ++ +
Sbjct: 395 GKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRK 454
Query: 432 SRAIRTIERDVGSKFKEL 449
S R IE++ G KF+ L
Sbjct: 455 SSVSR-IEKEAGIKFEHL 471
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 234/406 (57%), Gaps = 26/406 (6%)
Query: 46 NPVPLQFRASLPSLAEFAVADFPYEEGSK----NDEGLEIKK-------LGISEEIVSAL 94
P F P++A A+ D EE K EG +I K +G + ++ +
Sbjct: 57 TPFEKNFYVESPAVA--AMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEV 114
Query: 95 AKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAK----HGR 150
K G ++ PIQ AM+GRD+IG A TG+GKTL++ +P I+ NA+ HG
Sbjct: 115 KKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLP---AIVHVNAQPMLAHGD 171
Query: 151 GRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGT 208
G P+ L LAPTRELA Q+++E + S+ + T C+YGG P Q+R L GV++V+ T
Sbjct: 172 G--PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIAT 229
Query: 209 PGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPY 268
PGR+ID++ NL+ V ++VLDEAD+ML +GF + KI+ + P RQTL +SAT P
Sbjct: 230 PGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPK 289
Query: 269 EIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCI 328
E++QL++K+L NP + ++G SD K I V K L L+ + G + +
Sbjct: 290 EVEQLSKKFLYNPYKV-IIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRIL 348
Query: 329 VFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
VF TK+ D+++ + ++HGD SQA+R+ L+ FR G ++ ATDVA+RGL
Sbjct: 349 VFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 408
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
D+ +V VI+YD P + E +VHR GRTGRAG KGTA T +R
Sbjct: 409 DVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANAR 454
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 221/356 (62%), Gaps = 9/356 (2%)
Query: 88 EEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAK 147
+ I+ A+AK G ++ PIQ A++GRD+IG A TG+GKTLA+ +P ++ +A+
Sbjct: 174 DNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLP---ALVHVSAQ 230
Query: 148 HGRGRD--PLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVD 203
G+D P+ L LAPTRELA Q+++E + + + C+YGG P Q+R L GV+
Sbjct: 231 PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVE 290
Query: 204 VVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFS 263
+V+ TPGR+ID+L NLK V ++VLDEAD+ML +GF+ + KI+ ++ P RQTL++S
Sbjct: 291 IVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWS 350
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT P E++ L R++L +P ++G +D K I+ + + K L L+ +
Sbjct: 351 ATWPREVETLARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMD 409
Query: 324 GGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
G K ++F +TKR D+++ + A+HGD +Q++R+R LA F+ G ++ ATDV
Sbjct: 410 GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV 469
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
A+RGLD+ ++ V++YD PN E ++HR GRTGRAG KG A T D ++ R +
Sbjct: 470 AARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 216/360 (60%), Gaps = 10/360 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ + G E++ + G S PIQ AMQGRD++ A+TG+GKTL + IP
Sbjct: 158 MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF 217
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQ 194
+ + I+ +++ G P L L+PTRELA Q+++E + + + C+YGG P Q
Sbjct: 218 LHLQRIRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+R L+ G D+VV TPGR+ D+L ++L+++ ++VLDEAD+ML +GF+ + KI+ +P
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP 333
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
KRQTLM++AT P ++++ L NP ++ +G+ D+ +A+ I+ + V KQ
Sbjct: 334 TKRQTLMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ G K I+F TKR D+L+ ++++ A+HGD SQ +R+ L FR G
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
VLVATDVA+RGLD+ ++ V++YD PN E +VHR GRTGRAG G A + S+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 216/360 (60%), Gaps = 10/360 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ + G E++ + G S PIQ AMQGRD++ A+TG+GKTL + IP
Sbjct: 158 MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF 217
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQ 194
+ + I+ +++ G P L L+PTRELA Q+++E + + + C+YGG P Q
Sbjct: 218 LHLQRIRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+R L+ G D+VV TPGR+ D+L ++L+++ ++VLDEAD+ML +GF+ + KI+ +P
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP 333
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
KRQTLM++AT P ++++ L NP ++ +G+ D+ +A+ I+ + V KQ
Sbjct: 334 TKRQTLMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ G K I+F TKR D+L+ ++++ A+HGD SQ +R+ L FR G
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
VLVATDVA+RGLD+ ++ V++YD PN E +VHR GRTGRAG G A + S+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 216/360 (60%), Gaps = 10/360 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ + G E++ + G S PIQ AMQGRD++ A+TG+GKTL + IP
Sbjct: 158 MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF 217
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQ 194
+ + I+ +++ G P L L+PTRELA Q+++E + + + C+YGG P Q
Sbjct: 218 LHLQRIRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+R L+ G D+VV TPGR+ D+L ++L+++ ++VLDEAD+ML +GF+ + KI+ +P
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP 333
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
KRQTLM++AT P ++++ L NP ++ +G+ D+ +A+ I+ + V KQ
Sbjct: 334 TKRQTLMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ G K I+F TKR D+L+ ++++ A+HGD SQ +R+ L FR G
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
VLVATDVA+RGLD+ ++ V++YD PN E +VHR GRTGRAG G A + S+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 216/360 (60%), Gaps = 10/360 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ + G E++ + G S PIQ AMQGRD++ A+TG+GKTL + IP
Sbjct: 158 MSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF 217
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQ 194
+ + I+ +++ G P L L+PTRELA Q+++E + + + C+YGG P Q
Sbjct: 218 LHLQRIRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+R L+ G D+VV TPGR+ D+L ++L+++ ++VLDEAD+ML +GF+ + KI+ +P
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP 333
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
KRQTLM++AT P ++++ L NP ++ +G+ D+ +A+ I+ + V KQ
Sbjct: 334 TKRQTLMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ G K I+F TKR D+L+ ++++ A+HGD SQ +R+ L FR G
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
VLVATDVA+RGLD+ ++ V++YD PN E +VHR GRTGRAG G A + S+
Sbjct: 453 TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 207/348 (59%), Gaps = 6/348 (1%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKF 144
G+ EI+ L G PIQ A+Q RD++ A+TG+GKTL + IP I+
Sbjct: 441 GLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF--ILLR 498
Query: 145 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGV 202
+ ++ P L LAPTRELA Q++ E + + + C+YGG P Q+++L+ G
Sbjct: 499 HCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGA 558
Query: 203 DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMF 262
D+VV TPGR+ D+L ++ ++V +VLDEAD+ML +GF+ + KI++ +PP+RQTLM+
Sbjct: 559 DIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMY 618
Query: 263 SATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGILAPLITEH 321
+AT P E++++ L NPV ++ +G D+ A+ I+ Y V K+ L ++
Sbjct: 619 TATWPKEVRKIASDLLVNPVQVN-IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQ 677
Query: 322 AKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATD 381
+G K I+F TKR D L+ S+ + +HGD +Q +R+ L FR G VL+ATD
Sbjct: 678 ERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATD 737
Query: 382 VASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
VA+RGLDI ++ +VI+YD P E +VHR GRTGRAG G A TE
Sbjct: 738 VAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTE 785
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 211/349 (60%), Gaps = 8/349 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
+ + G+ E++ + G S PIQ AMQ RD++ A+TG+GKTL + IP
Sbjct: 161 MSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP-- 218
Query: 139 DKIIKFNAKHGRGR-DPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQM 195
+ H R P L L+PTRELA Q++ E + + + C+YGG P Q+
Sbjct: 219 -GFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 277
Query: 196 RQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPP 255
++++ GVD+VV TPGR+ D+L ++L +V ++VLDEAD+ML +GF+ + KI++ +P
Sbjct: 278 KEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT 337
Query: 256 KRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSI-VTDSYVKQGIL 314
KRQTLM++AT P E++++ L NP ++ +G+ D+ +A+ +I V K L
Sbjct: 338 KRQTLMYTATWPKEVRKIAADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRL 396
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHF 374
++ G K I+F TKR D+L+ +++++ A+HGD SQA+R+ L FR G
Sbjct: 397 EQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRT 456
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
VLVATDVA+RGLD+ ++ +V++YD PN E +VHR GRTGRAG G A
Sbjct: 457 PVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLA 505
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 203/330 (61%), Gaps = 8/330 (2%)
Query: 98 GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGR-DPLA 156
G S PIQ AMQ RD++ A+TG+GKTL + IP + H R P
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP---GFMHLQRIHNDSRMGPTI 304
Query: 157 LALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIID 214
L L+PTRELA Q++ E + + + C+YGG P Q+++++ GVD+VV TPGR+ D
Sbjct: 305 LVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLND 364
Query: 215 LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLT 274
+L ++L +V ++VLDEAD+ML +GF+ + KI++ +P KRQTLM++AT P E++++
Sbjct: 365 ILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIA 424
Query: 275 RKYLNNPVTIDLVGDSDQKLADGISLYSI-VTDSYVKQGILAPLITEHAKGGKCIVFTQT 333
L NP ++ +G+ D+ +A+ +I V K L ++ G K I+F T
Sbjct: 425 ADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCST 483
Query: 334 KRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVD 393
KR D+L+ +++++ A+HGD SQA+R+ L FR G VLVATDVA+RGLD+ ++
Sbjct: 484 KRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIR 543
Query: 394 LVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
+V++YD PN E +VHR GRTGRAG G A
Sbjct: 544 VVVNYDFPNGVEDYVHRIGRTGRAGATGLA 573
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 217/359 (60%), Gaps = 13/359 (3%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTL F +P+ + I
Sbjct: 195 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHI 253
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV--YGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + L CV YGG+ ++QQ+ +L
Sbjct: 254 KDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKR 313
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V F+V+DEAD+M +GF+ + +I+ + P+R
Sbjct: 314 GTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPER 373
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSI--VTDSYVKQGILA 315
QT++FSAT P +++ L RK LN PV I + G S D L + +D +++ L
Sbjct: 374 QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN-KDITQLVEVRPESDRFLR---LL 429
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHF 374
L+ E ++ GK +VF Q++ D L M KS C +LHG Q RE T++ F+
Sbjct: 430 ELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVC 489
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
N+L+AT VA+RGLD+ ++LV+++D PN+ E +VHR GRTGRAG+KG A+ +ED ++
Sbjct: 490 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAK 548
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 219/359 (61%), Gaps = 13/359 (3%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTL F +P+ + I
Sbjct: 533 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHI 591
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV--YGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + L CV YGG+ ++QQ+ +L
Sbjct: 592 KDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKR 651
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V F+V+DEAD+M +GF+ + +I+ + P+R
Sbjct: 652 GTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPER 711
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDS--DQKLADGISLYSIVTDSYVKQGILA 315
QT++FSAT P +++ L RK LN PV I + G S ++ + + + +D +++ L
Sbjct: 712 QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLR---LL 767
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHF 374
L+ E ++ GK +VF Q++ D L M KS C +LHG Q RE T++ F+
Sbjct: 768 ELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVC 827
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
N+L+AT VA+RGLD+ ++LV+++D PN+ E +VHR GRTGRAG+KG A+ +ED ++
Sbjct: 828 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAK 886
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/336 (42%), Positives = 206/336 (61%), Gaps = 10/336 (2%)
Query: 97 KGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGR---D 153
K K PIQ + GRD+IG A+TG+GKTLAFGIP ++K N K G G +
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVN 191
Query: 154 PLALALAPTRELAKQVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYGVDVVVGTPGR 211
P L L+PTRELA Q+ ++ L +ICVYGG+ Q+ + GVD+V+GTPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 212 IIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIK 271
+ DL+ L L +V F+VLDEAD+ML +GF+E V IL RQ +MFSAT P ++
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVH 311
Query: 272 QLTRKYLN-NPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK--CI 328
+L +++++ NP+ + ++G D + V D + L L+ ++ K K +
Sbjct: 312 KLAQEFMDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVL 370
Query: 329 VFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
VF K +A+RL + + K ++HG+ +Q++R R+L+ F+EG +LVATDVA+RGL
Sbjct: 371 VFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGL 430
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
DIP+V++VI+Y P +E +VHR GRTGRAGKKG A
Sbjct: 431 DIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVA 466
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 224/376 (59%), Gaps = 21/376 (5%)
Query: 101 KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK-FNAKHGRGRD---PLA 156
K P+QR + ++GRD++ A+TG+GKT AF PI I+K + + RG PLA
Sbjct: 181 KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLA 240
Query: 157 LALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIID 214
+ L+PTRELA Q+ E + + + YGGTPI+QQ+R+L+ GVD++V TPGR+ D
Sbjct: 241 VILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLND 300
Query: 215 LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYEI 270
LL R ++++ ++F+ LDEAD+ML +GF+ + KI++++ PP+ RQTL+FSAT P EI
Sbjct: 301 LLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREI 360
Query: 271 KQLTRKYLNNPV--TIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKG--GK 326
++L +L N + + VG S + + V DS + ++ L + G GK
Sbjct: 361 QRLAADFLANYIFLAVGRVGSSTDLIVQRVEF---VLDSDKRSHLMDLLHAQRENGIQGK 417
Query: 327 ---CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
+VF +TKR AD L + + ++HGD +Q +RE L F+ G +LVATDV
Sbjct: 418 QALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDV 477
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDV 442
A+RGLDIP+V V+++DLPN+ + +VHR GRTGRAGK G A + + R + +
Sbjct: 478 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELM 537
Query: 443 GSKFKELPKIAVDRAS 458
+E+P+ AS
Sbjct: 538 QEANQEVPEWLTRYAS 553
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 217/376 (57%), Gaps = 21/376 (5%)
Query: 101 KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN----AKHGRGRDPLA 156
K P+QR + GRD++ A+TG+GKT AF PI I+K + RG PLA
Sbjct: 168 KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLA 227
Query: 157 LALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIID 214
+ L+PTRELA Q+ E + + + YGGTP++QQ+R+L+ GVD++V TPGR+ D
Sbjct: 228 VILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLND 287
Query: 215 LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI---LDRLPPK-RQTLMFSATMPYEI 270
LL RG ++L+ V+F+ LDEAD+ML +GF+ + KI +D PP RQT++FSAT P EI
Sbjct: 288 LLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREI 347
Query: 271 KQLTRKYLNNPV--TIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK-- 326
++L +L+N + + VG S + + V DS + ++ L + G +
Sbjct: 348 QRLASDFLSNYIFLAVGRVGSSTDLI---VQRVEFVHDSDKRSHLMDLLHAQRENGNQGK 404
Query: 327 ---CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
+VF +TK+ AD L + + +HGD SQ +RE L F+ G +LVATDV
Sbjct: 405 QALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDV 464
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDV 442
A+RGLDIP+V V+++DLPN+ + +VHR GRTGRAG G A ++ + + + +
Sbjct: 465 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELM 524
Query: 443 GSKFKELPKIAVDRAS 458
+E+P AS
Sbjct: 525 QEANQEVPDWLTRYAS 540
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 211/375 (56%), Gaps = 11/375 (2%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+GI E+++ + + G K IQ+ + P +QGRD+I +A++GTGKT + + +
Sbjct: 40 MGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVV-- 97
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA--PNLDTICVYGGTPISQQMRQLDYG 201
R+ AL L+PTRELA Q EK N+ GG + + +R+L++G
Sbjct: 98 ----DTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHG 153
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLM 261
V VV GTPGR+ D++ R +L + ++ ++LDE+D+ML GF++ + + LPP Q +
Sbjct: 154 VHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCL 213
Query: 262 FSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEH 321
SAT+P+EI ++T K++ PV I + D+ +GI + + + + + +
Sbjct: 214 VSATLPHEILEMTSKFMTEPVKI--LVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDT 271
Query: 322 AKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVAT 380
+ ++F TKR D LS M S + ++HGD+ Q +R+ + FR G VL+ T
Sbjct: 272 LTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITT 331
Query: 381 DVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIER 440
DV +RG+D+ V LVI+YDLPNN E+++HR GR+GR G+KG AI D + +R IE+
Sbjct: 332 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
Query: 441 DVGSKFKELPKIAVD 455
++ E+P D
Sbjct: 392 YYSTQIDEMPMNVAD 406
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 206/360 (57%), Gaps = 25/360 (6%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
++ E++ A+ + G K PIQ A + +Q RD+IG A TG+GKT AF +P+ I +
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 146 --AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQQMRQLDYG 201
++ P A+ +APTRELA+Q+E+E A L + GG I +Q ++ G
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK----- 256
++V+ TPGR+ID L R L + ++VLDEAD+M+ +GF+ V +LD +P
Sbjct: 440 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPE 499
Query: 257 ------------RQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIV 304
R T MFSATMP +++L RKYL NPV + + + K D IS + I+
Sbjct: 500 NEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTI--GTAGKTTDLISQHVIM 557
Query: 305 TDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRE 363
K L L+ E + IVF TK++ D ++ ++ K+ + LHG SQ QRE
Sbjct: 558 MKESEKFFRLQKLLDELGEK-TAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQRE 616
Query: 364 RTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
+L GFR +NVLVATDV RG+DIP+V VI+YD+P + E++ HR GRTGRAGK G A
Sbjct: 617 ISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVA 676
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 219/371 (59%), Gaps = 19/371 (5%)
Query: 104 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN----AKHGRGRDPLALAL 159
P+QR + + RD++ A+TG+GKT AF PI I+K + R P A+ L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 160 APTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLN 217
+PTRELA Q+ E + + + YGGTPI QQ+R+L+ G D++V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 218 RGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYEIKQL 273
R ++++ ++F+ LDEAD+ML +GF+ + KI++++ PP+ RQT++FSAT P +I++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 274 TRKYLNNPVTIDL--VGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK---CI 328
+++N + + + VG S + + V +S + ++ L + K +
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF---VQESDKRSHLMDLLHAQRETQDKQSLTL 412
Query: 329 VFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
VF +TKR AD L + + ++HGD +Q +RE L F+ G +LVATDVA+RGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFK 447
DIP+V V+++DLPN+ + +VHR GRTGRAGK G A E+ ++ R++ + +
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQ 532
Query: 448 ELPKIAVDRAS 458
E+P+ AS
Sbjct: 533 EVPEWLTRYAS 543
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 219/371 (59%), Gaps = 19/371 (5%)
Query: 104 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN----AKHGRGRDPLALAL 159
P+QR + + RD++ A+TG+GKT AF PI I+K + R P A+ L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 160 APTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLN 217
+PTRELA Q+ E + + + YGGTPI QQ+R+L+ G D++V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 218 RGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYEIKQL 273
R ++++ ++F+ LDEAD+ML +GF+ + KI++++ PP+ RQT++FSAT P +I++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 274 TRKYLNNPVTIDL--VGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK---CI 328
+++N + + + VG S + + V +S + ++ L + K +
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF---VQESDKRSHLMDLLHAQRETQDKQSLTL 412
Query: 329 VFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
VF +TKR AD L + + ++HGD +Q +RE L F+ G +LVATDVA+RGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFK 447
DIP+V V+++DLPN+ + +VHR GRTGRAGK G A E+ ++ R++ + +
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQ 532
Query: 448 ELPKIAVDRAS 458
E+P+ AS
Sbjct: 533 EVPEWLTRYAS 543
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 219/371 (59%), Gaps = 19/371 (5%)
Query: 104 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN----AKHGRGRDPLALAL 159
P+QR + + RD++ A+TG+GKT AF PI I+K + R P A+ L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 160 APTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLN 217
+PTRELA Q+ E + + + YGGTPI QQ+R+L+ G D++V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 218 RGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYEIKQL 273
R ++++ ++F+ LDEAD+ML +GF+ + KI++++ PP+ RQT++FSAT P +I++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 274 TRKYLNNPVTIDL--VGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK---CI 328
+++N + + + VG S + + V +S + ++ L + K +
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF---VQESDKRSHLMDLLHAQRETQDKQSLTL 412
Query: 329 VFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
VF +TKR AD L + + ++HGD +Q +RE L F+ G +LVATDVA+RGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFK 447
DIP+V V+++DLPN+ + +VHR GRTGRAGK G A E+ ++ R++ + +
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQ 532
Query: 448 ELPKIAVDRAS 458
E+P+ AS
Sbjct: 533 EVPEWLTRYAS 543
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 206/353 (58%), Gaps = 6/353 (1%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKF 144
G S +I+SA+ K+ K IQ L + GRD+IG A+TG+GKT AF +P+ I+
Sbjct: 234 GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMD- 292
Query: 145 NAKHGRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVYGGTPISQQMRQLDYGV 202
+ R P+ + APTRELA Q+ E + + A L VYGG +Q ++L G
Sbjct: 293 QPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGC 352
Query: 203 DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMF 262
++VV TPGR+ID+L AL + ++VLDEAD+M +GF+ V I+ ++ P RQTL+F
Sbjct: 353 EIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLF 412
Query: 263 SATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHA 322
SATMP+++++L R+ L++P+ + VG+ D + +++ K L +
Sbjct: 413 SATMPWKVEKLAREILSDPIRV-TVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMI 471
Query: 323 KGGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATD 381
G +VF K D + ++ S K ALHGD QA R TL F+ G +VL+ATD
Sbjct: 472 DEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATD 531
Query: 382 VASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG-KKGTAILVHTEDQSR 433
VA+RGLDI ++ V++YD+ + ++ VHR GRTGRAG + G A + T+ ++R
Sbjct: 532 VAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREAR 584
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 218/380 (57%), Gaps = 17/380 (4%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+LG+ EE+V A + G IQ L A++G+D+IG A+TG+GKT AF IPI ++
Sbjct: 13 ELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALL 72
Query: 143 KF----NAKHGRGRDP--LALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQ 194
++ K GR DP A L+PTRELA Q+ ++F ++ C + GG QQ
Sbjct: 73 EYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQ 132
Query: 195 MRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
L V+V TPGR+ D + + +LK ++++VLDEAD++L F++ + +IL+ +
Sbjct: 133 TIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEI 192
Query: 254 PPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGI-SLYSIVTDSYVKQG 312
P +R+T +FSATM ++++L R L NPV I+ S D + Y V Y K
Sbjct: 193 PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAA--SKYSTVDTLKQQYRFVAAKY-KDC 249
Query: 313 ILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEAL--HGDISQAQRERTLAGFR 370
L +++E + ++FT+T D R + +SL A+ G ++Q++R L F+
Sbjct: 250 YLVYILSEMPES-TSMIFTRTC-DGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFK 307
Query: 371 EGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTED 430
G N+LV TDVASRGLDIP+VD+VI+YD+P NS+ ++HR GRT RAG+ G I + +
Sbjct: 308 AGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQY 367
Query: 431 QSRAIRTIERDVGSKFKELP 450
+ IE+ +G K E P
Sbjct: 368 ELEWYIQIEKLIGKKLPEYP 387
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 203/356 (57%), Gaps = 36/356 (10%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ L K K PIQ L M GRD IG A+TG+GKTL F +P+ + I
Sbjct: 400 QTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHI 458
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV--YGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + L ICV YGG+ ++QQ+ +L
Sbjct: 459 KDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKR 518
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 519 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 578
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S D L I +S + L L
Sbjct: 579 QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN-KDITQLVEIRPESE-RFSRLLEL 636
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
+ E + GK +VF +++ E++++ F+ N+L
Sbjct: 637 LGEWYEKGKVLVFVRSQ----------------------------EKSISDFKSDVCNLL 668
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
+AT VA+RGLD+ ++LV+++D PN+ E +VHR GRTGRAG+KG A+ +ED ++
Sbjct: 669 IATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAK 724
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 211/372 (56%), Gaps = 15/372 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G++++++ + G K IQ+ L P ++GRD+I +A++GTGKT I + +I+
Sbjct: 27 MGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC-QIVN 85
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVYGGTPISQQMRQLDYG 201
++ R L L+P+RELA Q EK + + N+ GG I + +++L+ G
Sbjct: 86 ISS-----RKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERG 140
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLM 261
V V GTPGR+ D++ RG+L K V+ +VLDE+D+ML G ++ + + LP Q +
Sbjct: 141 VHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCL 200
Query: 262 FSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEH 321
SAT+P EI ++T K++ +PV I + D+ +GI Y + D ++ L +
Sbjct: 201 ISATLPQEILEMTEKFMTDPVRI--LVKPDELTLEGIKQYYVDVDK--EEWKFDTLCDLY 256
Query: 322 AKG--GKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLV 378
+ + I+F T++ D L+ M S + ++HGD Q +R+ + FR VL+
Sbjct: 257 GRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLI 316
Query: 379 ATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
A+DV +RG+D+ V VI+YD+PNN E+++HR GR GR G++G AI + ++ I
Sbjct: 317 ASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDI 376
Query: 439 ERDVGSKFKELP 450
ER G+K +E+P
Sbjct: 377 ERHYGTKIREMP 388
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 207/388 (53%), Gaps = 15/388 (3%)
Query: 73 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 132
S +D +G+ E ++ + G K IQ+ + P +G D+I +A++GTGKT
Sbjct: 23 SYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 82
Query: 133 FGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGT 189
F + ++ F+ + AL LAPTRELA+Q+EK L CV GGT
Sbjct: 83 FCSGVLQQL-DFSLIQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGT 135
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ + R L GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I
Sbjct: 136 SVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDI 195
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGI-SLYSIVTDSY 308
LPPK Q +FSATMP E ++TRK+++ PV I + D+ +GI Y V
Sbjct: 196 FQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI--LVKRDELTLEGIKQFYVNVEKEE 253
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLA 367
K L L E + ++F T+R D L+ M S+ A HGD+ Q R+ +
Sbjct: 254 WKLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 312
Query: 368 GFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVH 427
FR G VL+ TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI
Sbjct: 313 EFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFV 372
Query: 428 TEDQSRAIRTIERDVGSKFKELPKIAVD 455
T D R + I++ +ELP D
Sbjct: 373 TRDDERMLFDIQKFYNVVVEELPSNVAD 400
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 205/387 (52%), Gaps = 13/387 (3%)
Query: 73 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 132
S +D +G+ E ++ + G K IQ+ + P +G D+I +A++GTGKT
Sbjct: 33 SYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 92
Query: 133 FGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGT 189
F + ++ F+ + AL LAPTRELA+Q+EK L CV GGT
Sbjct: 93 FCSGVLQQL-DFSLIQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGT 145
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ + R L GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I
Sbjct: 146 SVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDI 205
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV 309
LPPK Q +FSATMP E ++TRK+++ PV I LV + L Y V
Sbjct: 206 FQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEEW 264
Query: 310 KQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAG 368
K L L E + ++F T+R D L+ M S+ A HGD+ Q R+ +
Sbjct: 265 KLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 323
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
FR G VL+ TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T
Sbjct: 324 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 383
Query: 429 EDQSRAIRTIERDVGSKFKELPKIAVD 455
D R + I++ +ELP D
Sbjct: 384 RDDERMLFDIQKFYNVVVEELPSNVAD 410
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 189/305 (61%), Gaps = 9/305 (2%)
Query: 88 EEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAK 147
+ I+ A+AK G ++ PIQ A++GRD+IG A TG+GKTLA+ +P ++ +A+
Sbjct: 174 DNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLP---ALVHVSAQ 230
Query: 148 HGRGRD--PLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVD 203
G+D P+ L LAPTRELA Q+++E + + + C+YGG P Q+R L GV+
Sbjct: 231 PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVE 290
Query: 204 VVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFS 263
+V+ TPGR+ID+L NLK V ++VLDEAD+ML +GF+ + KI+ ++ P RQTL++S
Sbjct: 291 IVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWS 350
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT P E++ L R++L +P ++G +D K I+ + + K L L+ +
Sbjct: 351 ATWPREVETLARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMD 409
Query: 324 GGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
G K ++F +TKR D+++ + A+HGD +Q++R+R LA F+ G ++ ATDV
Sbjct: 410 GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV 469
Query: 383 ASRGL 387
A+RGL
Sbjct: 470 AARGL 474
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 205/368 (55%), Gaps = 27/368 (7%)
Query: 82 KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI---- 137
K + ++ L +KGI + PIQ L + GRDMIG A TG+GKTL F +P+
Sbjct: 149 KDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIA 208
Query: 138 --KDKIIKFNAKHGRGRDPLALALAPTRELAKQ---VEKEFYD-----SAPNLDTICVYG 187
++ ++ A G P+ L + P+RELA+Q V ++F P L ++ G
Sbjct: 209 LQEEMMMPIAA----GEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIG 264
Query: 188 GTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVE 247
G + Q+ + GV +VV TPGR+ D+L + ++L +++ LDEAD+++ +GF++D+
Sbjct: 265 GIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIR 324
Query: 248 KILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDS 307
++ D +RQTL+FSATMP +I+ R L PVT++ VG A +L I
Sbjct: 325 EVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVN-VGR-----AGAANLDVIQEVE 378
Query: 308 YVKQ--GILAPLITEHAKGGKCIVFTQTKRDADRL-SHSMSKSLKCEALHGDISQAQRER 364
YVKQ I+ L ++F + K D D + + + K ++ A+HG Q RE
Sbjct: 379 YVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREY 438
Query: 365 TLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
++ F+ G +VLVATDVAS+GLD P++ VI+YD+P E +VHR GRTGR GK G A
Sbjct: 439 AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIAT 498
Query: 425 LVHTEDQS 432
++QS
Sbjct: 499 TFINKNQS 506
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 205/387 (52%), Gaps = 18/387 (4%)
Query: 73 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 132
S +D +G+ E ++ +G K IQ+ + P +G D+I +A++GTGKT
Sbjct: 33 SYDDVHESFDAMGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 87
Query: 133 FGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGT 189
F + ++ F+ + AL LAPTRELA+Q+EK L CV GGT
Sbjct: 88 FCSGVLQQL-DFSLIQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGT 140
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ + R L GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I
Sbjct: 141 SVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDI 200
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV 309
LPPK Q +FSATMP E ++TRK+++ PV I LV + L Y V
Sbjct: 201 FQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEEW 259
Query: 310 KQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAG 368
K L L E + ++F T+R D L+ M S+ A HGD+ Q R+ +
Sbjct: 260 KLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 318
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
FR G VL+ TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T
Sbjct: 319 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 378
Query: 429 EDQSRAIRTIERDVGSKFKELPKIAVD 455
D R + I++ +ELP D
Sbjct: 379 RDDERMLFDIQKFYNVVVEELPSNVAD 405
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 197/367 (53%), Gaps = 13/367 (3%)
Query: 73 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 132
S +D +G+ E ++ + G K IQ+ + P +G D+I +A++GTGKT
Sbjct: 33 SYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 92
Query: 133 FGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGT 189
F + ++ F+ + AL LAPTRELA+Q+EK L CV GGT
Sbjct: 93 FCSGVLQQL-DFSLIQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGT 145
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ + R L GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I
Sbjct: 146 SVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDI 205
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV 309
LPPK Q +FSATMP E ++TRK+++ PV I LV + L Y V
Sbjct: 206 FQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEEW 264
Query: 310 KQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAG 368
K L L E + ++F T+R D L+ M S+ A HGD+ Q R+ +
Sbjct: 265 KLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 323
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
FR G VL+ TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T
Sbjct: 324 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 383
Query: 429 EDQSRAI 435
D R +
Sbjct: 384 RDDERML 390
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 211/395 (53%), Gaps = 26/395 (6%)
Query: 69 YEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTG 128
Y+E + + +E++ +++ + G K IQ+ + P +G D+I +A++GTG
Sbjct: 36 YDEVCDSFDAMELQP-----DLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTG 90
Query: 129 KTLAF--GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---I 183
KT F G+ + I + AL LAPTRELA+Q+EK L
Sbjct: 91 KTATFCSGVLQQLDISLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKAQA 142
Query: 184 CVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQ 243
CV GGT + + R L GV VVVGTPGR+ DLL R +L ++ VLDEAD+ML GF+
Sbjct: 143 CV-GGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFK 201
Query: 244 EDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSI 303
+ + I LP K Q +FSATMP E ++TRK++N PV I + D+ +GI + +
Sbjct: 202 DQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 259
Query: 304 VTDSYVKQGILAPL--ITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQA 360
D ++ L L + E + ++F T+R D L+ M S+ A HGD+ Q
Sbjct: 260 NVDK--EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 317
Query: 361 QRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKK 420
R+ + FR G VL+ TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+K
Sbjct: 318 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRK 377
Query: 421 GTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVD 455
G AI T + R + I+R +ELP D
Sbjct: 378 GVAINFMTSEDERMMADIQRFYNVVVEELPSNVAD 412
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 208/378 (55%), Gaps = 15/378 (3%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + E++ + +KG + PIQ + A+ GRD++ RA+ GTGKT AF IP
Sbjct: 129 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIP 188
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL--DTICVYGGTPISQQ 194
+ +KI + N A+ + PTRELA Q + + +L + GGT +
Sbjct: 189 VLEKIDQDNNVIQ------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 242
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ VE ++ LP
Sbjct: 243 IMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLP 302
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
RQ LMFSAT P +K ++L NP I+L+ D+ GI+ + + K L
Sbjct: 303 ESRQILMFSATFPVTVKDFKDRFLTNPYVINLM---DELTLKGITQFYAFVEERQKIHCL 359
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGH 373
L ++ + + I+F + + L+ +++ C +H + Q R R FR G
Sbjct: 360 NTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 418
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQS 432
LV TD+ +RG+DI V++VI++D P N+E ++HR GR+GR G G A+ L+ ED+
Sbjct: 419 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRF 478
Query: 433 RAIRTIERDVGSKFKELP 450
R IE+++G++ K++P
Sbjct: 479 NLYR-IEQELGTEIKQIP 495
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 208/378 (55%), Gaps = 15/378 (3%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + E++ + +KG + PIQ + A+ GRD++ RA+ GTGKT AF IP
Sbjct: 129 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIP 188
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL--DTICVYGGTPISQQ 194
+ +KI + N A+ + PTRELA Q + + +L + GGT +
Sbjct: 189 VLEKIDQDNNVIQ------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD 242
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ VE ++ LP
Sbjct: 243 IMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLP 302
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
RQ LMFSAT P +K ++L NP I+L+ D+ GI+ + + K L
Sbjct: 303 ESRQILMFSATFPVTVKDFKDRFLTNPYVINLM---DELTLKGITQFYAFVEERQKIHCL 359
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGH 373
L ++ + + I+F + + L+ +++ C +H + Q R R FR G
Sbjct: 360 NTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 418
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQS 432
LV TD+ +RG+DI V++VI++D P N+E ++HR GR+GR G G A+ L+ ED+
Sbjct: 419 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRF 478
Query: 433 RAIRTIERDVGSKFKELP 450
R IE+++G++ K++P
Sbjct: 479 NLYR-IEQELGTEIKQIP 495
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 208/372 (55%), Gaps = 13/372 (3%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+L +S ++ A G K PIQ A + A+ GRD+ A TG+GKT AF +P ++++
Sbjct: 171 ELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLL 230
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDY 200
F K R L L PTRELA Q+ + A D C + GG + +Q L
Sbjct: 231 -FRPK--RVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 201 GVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQT 259
D+VV TPGR+ID L N +++L ++ ++LDEAD++LQ GF ++ +++ P +RQT
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347
Query: 260 LMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIV---TDSYVKQGILAP 316
++FSATM E+K+L + LN P + L D + G++ + T ++ +L
Sbjct: 348 MLFSATMTEEVKELVKLSLNKP--LRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 317 LITEHAKGGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFN 375
L T K K I+F+ TK+ A RL LK LHG+++QAQR +L FR+ +
Sbjct: 406 LCTRTFKS-KVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVD 464
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAI 435
L+ATDVA+RGLDI V VI+Y P + +VHR GRT RAG++G A+ T+ +
Sbjct: 465 FLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLL 524
Query: 436 RTIERDVGSKFK 447
+ I + VGSK K
Sbjct: 525 KVIAKKVGSKLK 536
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 201/359 (55%), Gaps = 25/359 (6%)
Query: 90 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-----IKDKIIKF 144
++ L KGI PIQ L + GRDMIG A TG+GKTL F +P ++++I+
Sbjct: 108 LLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMP 167
Query: 145 NAKHGRGRDPLALALAPTRELAKQ---VEKEFY-----DSAPNLDTICVYGGTPISQQMR 196
A G P+AL + P+RELAKQ V ++F D P L ++ GG + Q+
Sbjct: 168 IAA---GEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLD 224
Query: 197 QLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK 256
+ GV +VV TPGR+ D+L + ++L + + LDEAD+++ +GF++D+ + D +
Sbjct: 225 VVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQ 284
Query: 257 RQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQ--GIL 314
RQTL+FSATMP +I+ L PVT++ VG A +L I YVKQ I+
Sbjct: 285 RQTLLFSATMPAKIQIFATSALVKPVTVN-VGR-----AGAANLDVIQEVEYVKQEAKIV 338
Query: 315 APLITEHAKGGKCIVFTQTKRDADRL-SHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++F + K D D + + + K ++ A+HG Q R+ ++ F+ G
Sbjct: 339 YLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGK 398
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQS 432
+VLVATDVAS+GLD P++ VI+YD+P E +VHR GRTGR GK G A ++QS
Sbjct: 399 KDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQS 457
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 201/376 (53%), Gaps = 13/376 (3%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ + G K IQ+ + P +G D+I +A++GTGKT F + ++
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-D 102
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEK---EFYDSAPNLDTICVYGGTPISQQMRQLDY 200
+ + AL LAPTRELA+Q+EK D CV GGT + + R L
Sbjct: 103 YALLQCQ-----ALVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQRILQA 156
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I LPPK Q
Sbjct: 157 GVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITE 320
+FSATMP E ++TRK+++ PV I LV + L Y V K L L E
Sbjct: 217 VFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-E 274
Query: 321 HAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVA 379
+ ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL+
Sbjct: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIE 439
TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T D R + I+
Sbjct: 335 TDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQ 394
Query: 440 RDVGSKFKELPKIAVD 455
+ +ELP D
Sbjct: 395 KFYNVVVEELPSNVAD 410
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 212/391 (54%), Gaps = 28/391 (7%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + +++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 152 KGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 211
Query: 137 IKDKIIKFNAKHGRGRDP-----LALALAPTRELA---KQVEKEFYDSAPNLDTICVYGG 188
+KI DP A+ L PTRELA QV KE ++ + GG
Sbjct: 212 TLEKI-----------DPENNVIQAVILVPTRELALQTSQVCKEL-SKYLKIEVMVTTGG 259
Query: 189 TPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEK 248
T + + +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L + FQ +E+
Sbjct: 260 TSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEE 319
Query: 249 ILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSY 308
++ LP RQ LMFSAT P +K +YL P I+L+ DQ G++ Y +
Sbjct: 320 LIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINLM---DQLTLMGVTQYYAFVEER 376
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLA 367
K L L ++ + + I+F + + L+ +++ C +H + Q R R
Sbjct: 377 QKVHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFH 435
Query: 368 GFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LV 426
FR G LV TD+ +RG+DI V++VI++D P SE ++HR GR+GR G G A+ LV
Sbjct: 436 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV 495
Query: 427 HTEDQSRAIRTIERDVGSKFKELPKIAVDRA 457
ED+ + +T E+++G++ K +P + +D+A
Sbjct: 496 TYEDRFKMYQT-EQELGTEIKPIPSL-IDKA 524
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 211/391 (53%), Gaps = 28/391 (7%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + +++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 122 KGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 181
Query: 137 IKDKIIKFNAKHGRGRDP-----LALALAPTRELA---KQVEKEFYDSAPNLDTICVYGG 188
+ +KI DP A+ L PTRELA QV KE N+ + GG
Sbjct: 182 VLEKI-----------DPNNNVIQAMILVPTRELALQTSQVCKEL-SKYLNIQVMVTTGG 229
Query: 189 TPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEK 248
T + + +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ +E+
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEE 289
Query: 249 ILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSY 308
++ LP RQ LMFSAT P +K ++L P I+L+ DQ G++ Y +
Sbjct: 290 LIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLM---DQLTLMGVTQYYAFVEER 346
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLA 367
K L L ++ + + I+F + + L+ +++ C +H + Q R R
Sbjct: 347 QKVHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFH 405
Query: 368 GFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LV 426
FR G LV TD+ +RG+DI V++VI++D P SE ++HR GR+GR G G A+ LV
Sbjct: 406 EFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV 465
Query: 427 HTEDQSRAIRTIERDVGSKFKELPKIAVDRA 457
ED+ + +T E+++G++ K +P +D+A
Sbjct: 466 TYEDRFKMYQT-EQELGTEIKPIPS-NIDQA 494
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 211/391 (53%), Gaps = 28/391 (7%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + +++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 122 KGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 181
Query: 137 IKDKIIKFNAKHGRGRDP-----LALALAPTRELA---KQVEKEFYDSAPNLDTICVYGG 188
+ +KI DP A+ L PTRELA QV KE N+ + GG
Sbjct: 182 VLEKI-----------DPNNNVIQAMILVPTRELALQTSQVCKEL-SKYLNIQVMVTTGG 229
Query: 189 TPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEK 248
T + + +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ +E+
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEE 289
Query: 249 ILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSY 308
++ LP RQ LMFSAT P +K ++L P I+L+ DQ G++ Y +
Sbjct: 290 LIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLM---DQLTLMGVTQYYAFVEER 346
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLA 367
K L L ++ + + I+F + + L+ +++ C +H + Q R R
Sbjct: 347 QKVHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFH 405
Query: 368 GFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LV 426
FR G LV TD+ +RG+DI V++VI++D P SE ++HR GR+GR G G A+ LV
Sbjct: 406 EFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLV 465
Query: 427 HTEDQSRAIRTIERDVGSKFKELPKIAVDRA 457
ED+ + +T E+++G++ K +P +D+A
Sbjct: 466 TYEDRFKMYQT-EQELGTEIKPIPS-NIDQA 494
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 197/376 (52%), Gaps = 24/376 (6%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
LG++E V + G+ K P+Q + + GRD++G A+TG+GKT AF +PI
Sbjct: 63 LGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPIL----- 117
Query: 144 FNAKHGRGRDP---LALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQL 198
H DP AL + PTRELA Q+ ++F S NL + GG + Q L
Sbjct: 118 ----HRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 199 DYGVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPP 255
+V+ TPGRI LL +F+VLDEAD++L +GFQ+++ I LP
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 256 KRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTL+FSATM ++ L N + K D ++ I D K+ L
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYE--AYEGLKTVDTLTQQFIFEDKDAKELYLV 291
Query: 316 PLITEHAKGG--KCIVFTQTKRDADRLSHSMSKSLKCE--ALHGDISQAQRERTLAGFRE 371
++++ G ++F T R RLS M L+ E A+H SQ+ R L+ F+
Sbjct: 292 HILSQMEDKGIRSAMIFVSTCRTCQRLSL-MLDELEVENIAMHSLNSQSMRLSALSKFKS 350
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQ 431
G +L+ATDVASRGLDIP VDLVI+YD+P + +VHR GRT RAG+ G A+ + TE
Sbjct: 351 GKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETD 410
Query: 432 SRAIRTIERDVGSKFK 447
+ I IE +VG K +
Sbjct: 411 VKLIHKIEEEVGKKME 426
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 201/376 (53%), Gaps = 18/376 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ +G K IQ+ + P +G D+I +A++GTGKT F + ++
Sbjct: 44 MGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-D 97
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEK---EFYDSAPNLDTICVYGGTPISQQMRQLDY 200
+ + AL LAPTRELA+Q+EK D CV GGT + + R L
Sbjct: 98 YALLQCQ-----ALVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQRILQA 151
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I LPPK Q
Sbjct: 152 GVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 211
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITE 320
+FSATMP E ++TRK+++ PV I LV + L Y V K L L E
Sbjct: 212 VFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-E 269
Query: 321 HAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVA 379
+ ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL+
Sbjct: 270 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 329
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIE 439
TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T D R + I+
Sbjct: 330 TDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQ 389
Query: 440 RDVGSKFKELPKIAVD 455
+ +ELP D
Sbjct: 390 KFYNVVVEELPSNVAD 405
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 197/350 (56%), Gaps = 11/350 (3%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+SE+I+ AL + G P+Q + +D++ A TG+GKTLAF +P + I + N
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 146 AKHGRGRDPLALALAPTRELAKQVEK---EFYDSAPNLDTICVYGGTPISQQMRQLDY-G 201
+ + + + ++PTREL+ Q+ K F + PN++++ + GG + M L+ G
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 202 VDVVVGTPGRIIDLLNRGA-LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
++++GTPGR+ D++ R L+ + ++ ++LDEAD++L +GFQ+ V I+ RLP +R+T
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITE 320
+FSAT + L + L N + + +S K + G+ + ++ K L L+ E
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLIE 262
Query: 321 HAKGGKCIVFTQTKRDADRLSHSMSK-----SLKCEALHGDISQAQRERTLAGFREGHFN 375
+ K K +VF T D +SK S+ + HG + Q R+ LA F E
Sbjct: 263 N-KNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSG 321
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
VL+ TDVA+RGLDIP +D V+ YD P + ++F+HR GRT R ++G AI+
Sbjct: 322 VLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIV 371
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 182/334 (54%), Gaps = 28/334 (8%)
Query: 113 AMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNA--KHGRGRDPLALALAPTRELAKQVE 170
++ RD+IG + TG+GKT AF +P+ I + + + P AL + PTRELA Q+E
Sbjct: 236 GLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIE 295
Query: 171 KEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQF 228
+E + + + G I +Q +L G ++V+ TPGR++D L R + L + +
Sbjct: 296 EETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNY 355
Query: 229 MVLDEADQMLQIGFQEDVEKILDRLPPK-----------------RQTLMFSATMPYEIK 271
+VLDEAD+M+ + F+ V ++LD +P R T MFSATM ++
Sbjct: 356 LVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVE 415
Query: 272 QLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFT 331
+L RK+L NPV + +G++ + + + I+T K L LI + IVF
Sbjct: 416 RLARKFLRNPVVV-TIGETTKFITQQV----IMTKESDKFSRLKKLIDDLGDDKTAIVFV 470
Query: 332 QTKRDADRLSHSMSKSLKCE--ALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDI 389
T+ D + ++ K +C LH SQ QR+ +L F++ FNVLV TDV RGLDI
Sbjct: 471 NTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDI 530
Query: 390 PNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
++ VI+YD+PN +++ HR GRTGRAGK G A
Sbjct: 531 LDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVA 564
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 204/371 (54%), Gaps = 21/371 (5%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
+ L +S+ ++ + G +++ IQ + P M G D++G ARTG+GKTLAF IP +
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 141 I--IKFNAKHGRGRDPLALALAPTRELAKQ---VEKEF--YDSAPNLDTIC-VYGGTPIS 192
+ +KF ++G G L + PTRELA Q V KE Y S T+ V GG
Sbjct: 216 LYRVKFTPRNGTG----VLVICPTRELAIQSYGVAKELLKYHS----QTVGKVIGGEKRK 267
Query: 193 QQMRQLDYGVDVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILD 251
+ L GV+++V TPGR++D L N K ++F+V+DEAD++L+ F+ED++KIL+
Sbjct: 268 TEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILN 327
Query: 252 RLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQ 311
LP RQT +FSAT +++ L R L +PV ID+ + +G+ V S ++
Sbjct: 328 LLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRL 387
Query: 312 GILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLK--CEALHGDISQAQRERTLAGF 369
L + K +VF T + + + + + +K C + G I Q +R T F
Sbjct: 388 LFLLTFLKRFQGKKKIMVFFSTCK-STKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQF 446
Query: 370 REGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRA-GKKGTAILVHT 428
+ +L+ T+VA+RGLD P+VD ++ YD P+N ++HR GRT R G KG A+LV T
Sbjct: 447 IKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506
Query: 429 EDQSRAIRTIE 439
+ + I+ ++
Sbjct: 507 PQELKFIQYLK 517
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 204/359 (56%), Gaps = 20/359 (5%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+S +I+ AL + P+Q A + +D+ A TG+GKTLAF +P+ + + +
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 146 AKHGRGRDPLALALAPTRELAKQ---VEKEFYDSAPNLDTICVYGGTPISQQMRQLDY-G 201
+ + + + ++PTREL+ Q V + F + N++++ + GG + M+ ++ G
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 202 VDVVVGTPGRIIDLLNR-GALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
+V++GTPGR+ D++ R L+ + ++ ++LDEAD++L++GFQ V I+ RLP +R+T
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDL----VGDSDQKLAD-----GISLYSIVTDSYVKQ 311
+FSAT +++L + L NPV +++ +S Q+L + G+ L + ++ K
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKS 262
Query: 312 GILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-----SLKCEALHGDISQAQRERTL 366
L L+ +++ K IVF T D +SK S+ +HGD+ Q R++ L
Sbjct: 263 SQLVDLLIKNS-DKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 367 AGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
A F + L+ TDVA+RGLDIP +D V+ YD P + +F HR+GRT R G++G AI+
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIV 380
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 206/365 (56%), Gaps = 16/365 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
L +SE+ A+ + G + IQ ++P ++G+D++G ARTG+GKTLAF IP + + K
Sbjct: 94 LDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFK 153
Query: 144 --FNAKHGRGRDPLALALAPTRELA---KQVEKEFYDSAPNLDTICVYGGTPISQQMRQL 198
F+ ++G G + + PTRELA K V +E ++ V GG + +++
Sbjct: 154 ERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQTVSM-VIGGNNRRSEAQRI 208
Query: 199 DYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++V+ TPGR++D L N A K ++ +V+DEAD++L+ F+ED+ KIL LP R
Sbjct: 209 ASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR 268
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGILAP 316
QT +FSAT ++K L R L +PV +D V D +K+ + G+ V S + +L
Sbjct: 269 QTALFSATQTSKVKDLARVSLTSPVHVD-VDDGRRKVTNEGLEQGYCVVPSKQRLILLIS 327
Query: 317 LITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFN 375
+ ++ K +VF T + + M S + +HG + Q +R +T F +
Sbjct: 328 FLKKNL-NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKG 386
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRA-GKKGTAILVHTEDQSRA 434
+L+ TDVA+RGLDIP+VD +I YD P+ ++HR GRT R G KG A+LV ++ +
Sbjct: 387 ILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQF 446
Query: 435 IRTIE 439
IR ++
Sbjct: 447 IRYLK 451
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 194/352 (55%), Gaps = 19/352 (5%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
+ L + + +A+ KKG PIQR + + G D++ ARTG+GKT AF IP+ +K
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 141 IIKFNAKHGRGRDPLALALAPTRELAKQVEK------EFYDSAPNLDTICVYGGTPISQQ 194
+ K + G R AL L+PTR+LA+Q K +F D L + GG + Q
Sbjct: 90 L-KQHVPQGGVR---ALILSPTRDLAEQTLKFTKELGKFTD----LRVSLLVGGDSMEDQ 141
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNR-GALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
+L G DV++ TPGR++ LL+ + L+ V+++V DEAD + +GF E + +IL +L
Sbjct: 142 FEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQL 201
Query: 254 PPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI 313
RQTL+FSAT+P + + + L P + L D + K++ + L + K
Sbjct: 202 SENRQTLLFSATLPSALAEFAKAGLREPQLVRL--DVENKISPDLKLSFLTVRPEEKYSA 259
Query: 314 LAPLITEH-AKGGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFRE 371
L L+ EH + + ++F TK + ++ ++++ +GD+ Q R+ ++ FR
Sbjct: 260 LLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRA 319
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
+L+ TD+A+RG+DIP +D VI++D P +IFVHR GR RAG+ G A
Sbjct: 320 RKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCA 371
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 208/389 (53%), Gaps = 10/389 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
L G+ +++ L G PIQ + A+ G+ ++ A TG+GKT +F +PI
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 139 DKIIKFNAKH--GRGRDPLALALAPTRELAKQVEKE--FYDSAPNLDTICVYGGTPISQQ 194
+ ++++H + R+PLA+ LAPTREL QVE + T V GG P+S Q
Sbjct: 170 SRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ ++ GV++++GTPGR++DLL++ + L + VLDE D MLQ GF++ V +I L
Sbjct: 230 LYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDS-YVKQGI 313
+ Q L+FSAT+ E++++ L + + +G+ + K ++ +I D+ KQ +
Sbjct: 289 SQPQVLLFSATISREVEKVGGS-LAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKL 346
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMS--KSLKCEALHGDISQAQRERTLAGFRE 371
L +++ +V+ ++ AD L+++++ +K ++HG+ +R + F
Sbjct: 347 FDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQ 431
G VLV+T V RG+D+ V VI +D+P+ + ++H GR R G+KGTAI+ ED
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDD 466
Query: 432 SRAIRTIERDVGSKFKELPKIAVDRASVE 460
+ + S +PK ++ S E
Sbjct: 467 RNLFPDLVAALKSSGAAIPKELINLTSRE 495
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 208/389 (53%), Gaps = 10/389 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
L G+ +++ L G PIQ + A+ G+ ++ A TG+GKT +F +PI
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 139 DKIIKFNAKH--GRGRDPLALALAPTRELAKQVEKE--FYDSAPNLDTICVYGGTPISQQ 194
+ ++++H + R+PLA+ LAPTREL QVE + T V GG P+S Q
Sbjct: 170 SRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ ++ GV++++GTPGR++DLL++ + L + VLDE D MLQ GF++ V +I L
Sbjct: 230 LYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDS-YVKQGI 313
+ Q L+FSAT+ E++++ L + + +G+ + K ++ +I D+ KQ +
Sbjct: 289 SQPQVLLFSATISREVEKVGGS-LAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKL 346
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMS--KSLKCEALHGDISQAQRERTLAGFRE 371
L +++ +V+ ++ AD L+++++ +K ++HG+ +R + F
Sbjct: 347 FDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQ 431
G VLV+T V RG+D+ V VI +D+P+ + ++H GR R G+KGTAI+ ED
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDD 466
Query: 432 SRAIRTIERDVGSKFKELPKIAVDRASVE 460
+ + S +PK ++ S E
Sbjct: 467 RNLFPDLVAALKSSGAAIPKELINLTSRE 495
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 210/394 (53%), Gaps = 51/394 (12%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK-F 144
IS + AL+ GI K+ +Q A L + G+D + +A+TGTGK++AF +P + ++K
Sbjct: 335 ISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAM 394
Query: 145 NAKHGRGR-DPL-ALALAPTRELAKQVEKE------FYDSAPNLDTICVYGGTPISQQMR 196
N+ G + P+ AL L PTRELA Q+ E F+D + + GGT +
Sbjct: 395 NSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHD---GIGVQTLIGGTRFKLDQQ 451
Query: 197 QLDYG-VDVVVGTPGRIIDLL-NRGALN--LKEVQFMVLDEADQMLQIGFQEDVEKILDR 252
+L+ +++ TPGR++D + N+ L L ++ ++DEAD +L +GF+ DVEKI+D
Sbjct: 452 RLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDC 511
Query: 253 LPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQG 312
LP +RQ+L+FSAT+P E++++++ LV D D I L + T V+Q
Sbjct: 512 LPRQRQSLLFSATIPKEVRRVSQ----------LVLKRDHSYIDTIGLGCVETHDKVRQS 561
Query: 313 -ILAP----------LITEHAKGG---KCIVFTQTKRDADRLSHSMSKSLKCEA--LHGD 356
I+AP L+ EH K IVF T L +++ + +K +H
Sbjct: 562 CIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGM-VTSLMYTLLREMKLNVREIHAR 620
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
Q R R F+E + +LV +DV++RG++ P+V LVI +P++ E ++HR GRTGR
Sbjct: 621 KPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR 680
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
GK G +L+ I ER + K+LP
Sbjct: 681 EGKGGEGLLL--------IAPWERYFLDELKDLP 706
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 188/344 (54%), Gaps = 16/344 (4%)
Query: 98 GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDP--L 155
G + +Q A L +QG+D++ +A+TGTGKT+AF +P + +IK R P +
Sbjct: 99 GFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPII 158
Query: 156 ALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDYG-VDVVVGTPGR 211
L + PTRELA Q E P++ V GGT + + R+L ++V TPGR
Sbjct: 159 VLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGR 218
Query: 212 IIDLLNRG---ALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPY 268
+ D ++ A L V+ +VLDEAD +L +GF+ ++E+I+ +P +RQT +FSAT+
Sbjct: 219 LKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSD 278
Query: 269 EIKQ-----LTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
E++Q L R + + G++ QK++ + S+ + G+L IT++
Sbjct: 279 EVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNV- 337
Query: 324 GGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
G K I+F T ++ + K SL +H Q+ R R FR+ +LV +DV
Sbjct: 338 GYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDV 397
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
++RG+D P+V LV+ LP++ E ++HR GRTGR GK+G +L+
Sbjct: 398 SARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLL 441
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 188/363 (51%), Gaps = 40/363 (11%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGR 150
+ A+ G + +Q A L ++G+D++ +A+TGTGKT+AF +P + ++K
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPD 391
Query: 151 GRDP--LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPIS-QQMRQLDYGVDV 204
+ P LAL + PTRELA Q E P++ V GGT + +Q R +
Sbjct: 392 NKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQI 451
Query: 205 VVGTPGRIIDLLNRG---ALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLM 261
+V TPGR+ D + A LK V+ +VLDEAD +L +GF++D+E+I+ +P +RQT +
Sbjct: 452 LVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFL 511
Query: 262 FSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQ---------- 311
FSAT+P E++Q+ L D + + + +I T V+Q
Sbjct: 512 FSATVPEEVRQICLVALRR----------DHEFVNCVHEGTIETHQQVRQMHMIASLDRH 561
Query: 312 -GILAPLITEHAKGG---KCIVFTQT----KRDADRLSHSMSKSLKCEALHGDISQAQRE 363
+L L+ EH G K IVF T K AD L +L +H Q+ R
Sbjct: 562 FSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGEL---NLNVREIHSRKPQSYRT 618
Query: 364 RTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
R FR+ +LV +DV++RG+D P+V LV+ LP + E ++HR GRTGR GK+G
Sbjct: 619 RVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEG 678
Query: 424 ILV 426
IL+
Sbjct: 679 ILL 681
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 206/392 (52%), Gaps = 47/392 (11%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
IS + AL+ GI K+ +Q A L + G+D + +A+TGTGK++AF +P + ++K
Sbjct: 382 ISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLK-A 440
Query: 146 AKHGRGRDPLA----LALAPTRELAKQVEKEFYDSAPNLDTICV---YGGTPISQQMRQL 198
G+G +A L L PTRELA Q+ E N D I V GGT ++L
Sbjct: 441 MNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRL 500
Query: 199 DYG-VDVVVGTPGRIIDLL-NRGALN--LKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ +++ TPGR++D + N+ L L ++ ++DEAD +L +GF+ DVEKI+D LP
Sbjct: 501 ESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLP 560
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQG-I 313
+RQ+L+FSAT+P E++++++ LV D D I L + T VKQ I
Sbjct: 561 RQRQSLLFSATIPKEVRRVSQ----------LVLKRDHSYIDTIGLGCVETHDKVKQSCI 610
Query: 314 LAP----------LITEHAKGG---KCIVFTQTKRDADRLSHSMSKSLKCEA--LHGDIS 358
+AP L+ EH K IVF T L +++ + +K +H
Sbjct: 611 VAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGM-VTSLMYTLLREMKLNVREIHARKP 669
Query: 359 QAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG 418
Q R F+E + +LV +DV++RG++ P+V LVI +P++ E ++HR GRTGR G
Sbjct: 670 QLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG 729
Query: 419 KKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
K G +L+ I ER + K+LP
Sbjct: 730 KGGKGLLL--------IAPWERYFLDELKDLP 753
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 193/355 (54%), Gaps = 24/355 (6%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGR 150
+ A+ G + +Q A L +QG+D++ +A+TGTGKT+AF +P + +IK
Sbjct: 394 LKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRD 453
Query: 151 GRDP--LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDYG-VDV 204
R P + L + PTRELA Q E P++ V GGT + + R++ +
Sbjct: 454 SRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQI 513
Query: 205 VVGTPGRIIDLLNRG---ALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLM 261
+V TPGR+ D + A L V+ +VLDEAD +L +GF+ D+E+I+ +P +RQT +
Sbjct: 514 LVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFL 573
Query: 262 FSATMPYEIKQLTRKYLN-NPVTIDLV----GDSDQKLADGISLYSIVT-DSYVKQGILA 315
FSAT+P E++Q+ L + I+ V G++ QK+ +Y I + D + +L
Sbjct: 574 FSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVT---QMYMIASLDRHFS--LLH 628
Query: 316 PLITEHAKGG---KCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFRE 371
L+ EH K I+F T ++ +S+ SL +H Q+ R R FR+
Sbjct: 629 VLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRK 688
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+LV +DV++RG+D P+V LV+ LP++ E ++HR GRTGR GK+G +L+
Sbjct: 689 SKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLL 743
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 197/356 (55%), Gaps = 12/356 (3%)
Query: 113 AMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH--GRGRDPLALALAPTRELAKQVE 170
A+ G+ ++ A TG+GKT +F +PI + ++++H + R+PLA+ LAPTREL QVE
Sbjct: 7 ALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVE 66
Query: 171 KE--FYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQF 228
+ T V GG P+S Q+ ++ GV++++GTPGR++DLL++ + L +
Sbjct: 67 DQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMT 126
Query: 229 MVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVG 288
VLDE D MLQ GF++ V +I L + Q L+FSAT+ E++++ L + + +G
Sbjct: 127 FVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGS-LAKEIILVSIG 184
Query: 289 DSDQ--KLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMS- 345
+ ++ K + ++++ V KQ + L +++ +V+ ++ AD L+++++
Sbjct: 185 NPNKPNKAVNQLAIW--VDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITV 242
Query: 346 -KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNS 404
+K ++HG+ +R + F G VLV+T V RG+D+ V VI +D+P+
Sbjct: 243 VTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTI 302
Query: 405 EIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVDRASVE 460
+ ++H GR R G+KGTAI+ ED + + S +PK ++ S E
Sbjct: 303 KEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSRE 358
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 191/373 (51%), Gaps = 21/373 (5%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---EPSP 112
Query: 149 GRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDYGV-DV 204
G+ AL L TRELA Q+ EF + P+ YGG I L +
Sbjct: 113 GQVS---ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 205 VVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQTLMFS 263
VVGTPGR++ L L+LK V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT+ EI+ + +K++ +P+ I V D + G+ + I K L L+ +
Sbjct: 230 ATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALD 287
Query: 324 GGKCIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHFNVLVA 379
+ ++F ++ A L+ + ++C +H +SQ +R F+EGH +LVA
Sbjct: 288 FNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVA 344
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTI 438
TD+ RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V + S + +
Sbjct: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQV 404
Query: 439 ERDVGSKFKELPK 451
+ KELP+
Sbjct: 405 QERFEVDIKELPE 417
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 191/373 (51%), Gaps = 21/373 (5%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---EPSP 112
Query: 149 GRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDYGV-DV 204
G+ AL L TRELA Q+ EF + P+ YGG I L +
Sbjct: 113 GQVS---ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 205 VVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQTLMFS 263
VVGTPGR++ L L+LK V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT+ EI+ + +K++ +P+ I V D + G+ + I K L L+ +
Sbjct: 230 ATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALD 287
Query: 324 GGKCIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHFNVLVA 379
+ ++F ++ A L+ + ++C +H +SQ +R F+EGH +LVA
Sbjct: 288 FNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVA 344
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTI 438
TD+ RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V + S + +
Sbjct: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQV 404
Query: 439 ERDVGSKFKELPK 451
+ KELP+
Sbjct: 405 QERFEVDIKELPE 417
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 179/344 (52%), Gaps = 21/344 (6%)
Query: 118 DMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA 177
D+I +A++G GKT F + +I G+ AL L TRELA Q+ EF +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI---EPSPGQVS---ALVLCHTRELAYQICNEFVRFS 55
Query: 178 ---PNLDTICVYGGTPISQQMRQLDYGV-DVVVGTPGRIIDLLNRGALNLKEVQFMVLDE 233
P+ YGG I L +VVGTPGR++ L L+LK V+ +LDE
Sbjct: 56 TYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 115
Query: 234 ADQMLQ-IGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ 292
D+ML+ + + DV++I P +Q +MFSAT+ EI+ + +K++ +P+ I V D +
Sbjct: 116 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAK 174
Query: 293 KLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCE- 351
G+ + I K L L+ + + ++F ++ A L+ + ++C
Sbjct: 175 LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLL---VECNF 230
Query: 352 ---ALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFV 408
+H +SQ +R F+EGH +LVATD+ RG+DI V++VI+YD+P++++ ++
Sbjct: 231 PSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 290
Query: 409 HRSGRTGRAGKKGTAI-LVHTEDQSRAIRTIERDVGSKFKELPK 451
HR GR GR G KG AI V + S + ++ KELP+
Sbjct: 291 HRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPE 334
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 198/379 (52%), Gaps = 24/379 (6%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
++LG+SEE++ AL + I IQ + M+ + ++ + TG+GKTLA+ +PI
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173
Query: 141 IIKFNAKHGRG---RDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVYGGTPISQQM 195
+ + A G+ R P + L PTREL++QV + + +I V GG+ I Q
Sbjct: 174 MREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQE 233
Query: 196 RQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPP 255
L+ +D+VVGTPGRI+ + G + ++ ++VLDEAD M GF ++ K L L
Sbjct: 234 DSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQ 293
Query: 256 KR--------QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDS--DQKLADGISLYSIVT 305
+ QT++ +ATM +++L + I+ + S +K+A+ + ++
Sbjct: 294 RALKTNDQGFQTVLVTATMTMAVQKLVDEEFQG---IEHLRTSTLHKKIANARHDFIKLS 350
Query: 306 DSYVK-QGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRE 363
K + +L L AKG K +VF T + + H +S++ + HG++ QR
Sbjct: 351 GGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRV 410
Query: 364 RTLAGFR--EGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKG 421
L F+ EG LV TD+A+RGLD+ +VD V+ +D P NS ++HR+GRT R G KG
Sbjct: 411 ENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKG 469
Query: 422 TAI-LVHTEDQSRAIRTIE 439
LV +DQ A R E
Sbjct: 470 KVTSLVSRKDQMLAARIEE 488
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 188/391 (48%), Gaps = 74/391 (18%)
Query: 105 IQRAVLE-PAMQGRDMIGRARTGTGKTLAFGIPI-------KDKIIKFNAKHGRGRDPL- 155
IQ+A A QG+D+IG A TG+GKTLAFG+PI ++K+ K A G
Sbjct: 216 IQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYA 275
Query: 156 ------ALALAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQQMRQLDYGVDVVVG 207
AL + PTRELA QV + ++A NL + + GG +Q R+L ++VV
Sbjct: 276 ADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVA 335
Query: 208 TPGRIIDLLNRGALNLKEVQ---FMVLDEADQMLQIGFQEDVEKILDRLP---------- 254
TPGR+ +L++ G +L E+ F VLDEAD+M++ G +++ ILD LP
Sbjct: 336 TPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKT 395
Query: 255 --------------PKRQTLMFSATMPYEI---KQLTRKYL------------------- 278
KRQT +FSAT+ K+L R
Sbjct: 396 QTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSER 455
Query: 279 ----NNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTK 334
+N IDL S LA I I + K L +++ H + G+ IVF +
Sbjct: 456 AGMRDNVAIIDLTTTS--ILAPKIEESFIKCEEKEKDAYLYYILSVHGQ-GRTIVFCTSV 512
Query: 335 RDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVD 393
D +S + L L ++ Q R +++ FR +L+ATD+ +RG+DI NV
Sbjct: 513 TDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVR 572
Query: 394 LVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
+IHY LP+++E++VHR GRT RA G +I
Sbjct: 573 TIIHYKLPHSAEVYVHRCGRTARAFADGCSI 603
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 208/423 (49%), Gaps = 61/423 (14%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
++LG+ + ++ +L ++G S +Q A + ++G D + ++ TG+GKTLA+ +PI +
Sbjct: 112 FEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSE 171
Query: 141 IIKF-------NAKHGRGRDPLALALAPTRELAKQ----VEKEFYDSAPNLDTICVYGGT 189
I ++++ + + A+ +AP+REL Q VEK + V G
Sbjct: 172 IGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGAN 231
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ Q+ +VVGTPGRI ++ G L+ +F+VLDE D++L F+ED+ +I
Sbjct: 232 RMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRI 291
Query: 250 LDRL------PPK--------RQTLMFSATMPYEIKQLTRKYLNNPVTIDLVG----DSD 291
L+ + PK RQT++ SAT+P+ + + + + + PV + D+
Sbjct: 292 LEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTV 351
Query: 292 QKLADGISLYSIVT--DSYVKQGI--LAPLITEHAKGGKCIVFTQTKRDADR-------- 339
Q A +SL + D ++ I L P + + CI Q K D R
Sbjct: 352 QPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYY----CISKHQHKVDTLRRCVHALDA 407
Query: 340 ------LSHSM----------SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVA 383
++HS ++ + +HGD+ + R L F+ G VLV +++
Sbjct: 408 QSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELS 467
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVG 443
+RGLD+ DLV++ +LP ++ + HR+GRTGR G+KGT + V E Q ++ +E+ +G
Sbjct: 468 ARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLG 527
Query: 444 SKF 446
F
Sbjct: 528 LPF 530
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 193/413 (46%), Gaps = 60/413 (14%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---EPSP 112
Query: 149 GRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDYGV-DV 204
G+ AL L TRELA Q+ EF + P+ YGG I L +
Sbjct: 113 GQVS---ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 205 VVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQTLMFS 263
VVGTPGR++ L L+LK V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 264 ATMPYEIKQLTRKY------------------------------------LNNPVTID-- 285
AT+ EI+ + +K+ LN P ID
Sbjct: 230 ATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPM 289
Query: 286 -LVGDSDQKLA-DGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHS 343
+ D + KL G+ + I K L L+ + + ++F ++ A L+
Sbjct: 290 EIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKL 348
Query: 344 MSKSLKCE----ALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYD 399
+ ++C +H +SQ +R F+EGH +LVATD+ RG+DI V++VI+YD
Sbjct: 349 L---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYD 405
Query: 400 LPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTIERDVGSKFKELPK 451
+P++++ ++HR GR GR G KG AI V + S + ++ KELP+
Sbjct: 406 MPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPE 458
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 76/430 (17%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---EPSP 112
Query: 149 GRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDYGV-DV 204
G+ AL L TRELA Q+ EF + P+ YGG I L +
Sbjct: 113 GQVS---ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 205 VVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQTLMFS 263
VVGTPGR++ L L+LK V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 264 ATMPYEIKQLTRKYL-----NNPVTIDL----VGDSDQKLAD-------GISLYSIVTDS 307
AT+ EI+ + +K++ N V++ L V +S+ +L +S++ +
Sbjct: 230 ATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMF 289
Query: 308 YVKQGI--------LAPL---------------------ITEHAKGGK------------ 326
+ K I ++P+ ++E K K
Sbjct: 290 HSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQ 349
Query: 327 CIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHFNVLVATDV 382
++F ++ A L+ + ++C +H +SQ +R F+EGH +LVATD+
Sbjct: 350 VVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDL 406
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTIERD 441
RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V + S + ++
Sbjct: 407 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQER 466
Query: 442 VGSKFKELPK 451
KELP+
Sbjct: 467 FEVDIKELPE 476
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 205/433 (47%), Gaps = 85/433 (19%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLE----PAMQGRDMIGRARTGTGKTLAFGIPIKDKI 141
++ ++ AL GIS LFP+Q AV P RD+ + TG+GKTL++ +PI +
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 142 IKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDS------------------------- 176
+ R AL + PTR+LA QV K+ +D+
Sbjct: 98 ASRPVRCLR-----ALVVLPTRDLALQV-KDVFDAIAPAVGLSVGSAVGQSSIAGEISQL 151
Query: 177 --APNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRG-ALNLKEVQFMVLDE 233
P LD Y +SQ L+ VD++V TPGR++D +N L+ ++++V+DE
Sbjct: 152 IKTPKLDAGICYDPDDLSQN---LESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDE 208
Query: 234 ADQMLQIGFQEDVEKIL-------DRLPP----------------KRQT----------- 259
D++L+ +Q + +L D L P +RQ+
Sbjct: 209 TDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYP 268
Query: 260 ----LMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
++ SAT+ + +L + L++P+ + G S +L + + ++ ++ +K L
Sbjct: 269 RLVKMVLSATLTQDPSKLIQLDLHHPLFMT-TGGSRYRLPEKLECLRLICETGMKPVYLV 327
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMS----KSLKCEALHGDISQAQRERTLAGFRE 371
L+ + +G KCI+FT + RL ++ +K + G ++Q+ R + L FR+
Sbjct: 328 ALL-KSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRK 386
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQ 431
G VLVA+D +RG+D+ V VI+YD+P ++ F+HR+GRT RAG+ G + + +
Sbjct: 387 GDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHE 446
Query: 432 SRAIRTIERDVGS 444
R + VGS
Sbjct: 447 VRRFSKLLEKVGS 459
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 186/376 (49%), Gaps = 21/376 (5%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G I+ LA+ G + PIQR + + GR+ A TG+GKT AF P+ +I
Sbjct: 145 RYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPM---LI 201
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGV 202
K G A+ L+P RELA Q +E + P+ +
Sbjct: 202 KLKRPSTDGIR--AVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWC 259
Query: 203 DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP-PKRQTLM 261
DV++ TP R+ + ++L +V+++VLDE+D++ + + ++ ++ P +
Sbjct: 260 DVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSL 319
Query: 262 FSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEH 321
FSAT+P +++L R +++ V + ++G + ++ + + S ++G L L
Sbjct: 320 FSATLPDSVEELARSIMHDAVRV-IIGRKNT-ASETVKQKLVFAGS--EEGKLLALRQSF 375
Query: 322 AK--GGKCIVFTQTKRDADRLSHSMSKSLKCE-----ALHGDISQAQRERTLAGFREGHF 374
A+ ++F Q+K A L LKCE +H D+ +RE + FR G
Sbjct: 376 AESLNPPVLIFVQSKERAKELYDE----LKCENIRAGVIHSDLPPGERENAVDQFRAGEK 431
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRA 434
VL+ATDV +RG+D ++ VI+YD P+++ ++HR GR+GRAG+ G AI +TE
Sbjct: 432 WVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPF 491
Query: 435 IRTIERDVGSKFKELP 450
+R I + S E+P
Sbjct: 492 LRNIANTMMSSGCEVP 507
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 189/370 (51%), Gaps = 23/370 (6%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+L IS++ L + +Q A + A+ GRD++G ARTG+GKTLAF IPI +K+
Sbjct: 75 QLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLH 134
Query: 143 K--FNAKHGRGRDPLALALAPTRELAKQV------EKEFYDSAPNLDTICVYGGTPISQQ 194
+ ++ + G G + ++PTRELA Q +F+ + L + GG
Sbjct: 135 RERWSPEDGVG----CIIISPTRELAAQTFGVLNKVGKFHKFSAGL----LIGGREGVDV 186
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGA-LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
++ + ++++V PGR++ ++ ++Q ++LDEAD++L F+ ++ I+ +L
Sbjct: 187 EKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQL 246
Query: 254 PPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI 313
P RQTL+FSAT ++K L R L +P I + ++ + ++ K +
Sbjct: 247 PKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDM 306
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK---SLKCEALHGDISQAQRERTLAGFR 370
L I H + +VF TK+ + + +K + ++LHG +SQ +R + F
Sbjct: 307 LWSFIKTHL-NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFI 365
Query: 371 EGHFNVLVATDVASRGLDIPN-VDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
E +VL TDV +RGLD VD V+ D P + ++HR GRT R +G ++L T
Sbjct: 366 ERQ-SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTP 424
Query: 430 DQSRAIRTIE 439
+ + I ++
Sbjct: 425 SEEKMIEKLQ 434
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 192/426 (45%), Gaps = 78/426 (18%)
Query: 105 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRE 164
+Q + + GRD++ A TGTGKT+A+ P+ + + K R AL + PTRE
Sbjct: 56 VQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRE 115
Query: 165 LAKQVEKEFYDSAPNLDTIC---VYGGTPISQQMRQLDYGVDVVVGTPGRIIDLL-NRGA 220
L QV + I V GG +++ +L G+ +++ TPGR++D L N +
Sbjct: 116 LCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTAS 175
Query: 221 LNLKEVQFMVLDEADQMLQIGFQEDVEKIL-------------DRLPPK---RQTLMFSA 264
K +++++ DEAD +L++G+ +++E+I+ D + PK +Q L+ SA
Sbjct: 176 FVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSA 235
Query: 265 TMPYEIKQLTRKYLNNPVTIDL---------------------------VGDSDQKLADG 297
T+ ++ L + L++PV I L V S L++
Sbjct: 236 TLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSED 295
Query: 298 ISLYSIVTDSYVKQGILAPLIT---------EHAKGGKCIVFTQTKRDADRLSHSMSKS- 347
+ S + Y++ A L+ E K +VF T RDA +S+
Sbjct: 296 YGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFST-RDAVDFHYSLLSEF 354
Query: 348 -----------------LKCEA--LHGDISQAQRERTLAGFREGHFNVLVATDVASRGLD 388
LKC+ LHG + Q R F+ VL++TDVA+RGLD
Sbjct: 355 QWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLD 414
Query: 389 IPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKE 448
P V +I YD P + +VHR GRT R G+KG A+L + ++ +++ G+ E
Sbjct: 415 FPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKH-GASLTE 473
Query: 449 LPKIAV 454
P + V
Sbjct: 474 YPLMKV 479
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 54/387 (13%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
++LG+ ++ AL KKGI K IQ++ + ++G+D++ RA+TG+GKTLA+ +P+ K
Sbjct: 48 FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 107
Query: 141 IIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC------VYGGTPIS-Q 193
+ ++ + P A L P+REL +QV Y +L +C V + +S
Sbjct: 108 LFSADSVSKKKLAPSAFILVPSRELCQQV----YTEVSSLIELCRVQLKAVQLTSSMSAS 163
Query: 194 QMRQLDYGV-DVVVGTPGRIIDLLNRGALNLKEV----QFMVLDEADQMLQIGFQEDVEK 248
MR G+ +++V TP I G L V +VLDEAD +L G+++++
Sbjct: 164 DMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRS 223
Query: 249 ILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLA--DGISLYSIVTD 306
+ +P + Q L+ SAT ++++L + L+NP+ + L D+D++ A + + I
Sbjct: 224 VTSIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCS 283
Query: 307 SYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERT 365
+ K + L+ K ++F T RL + K +K L+G++ Q R
Sbjct: 284 AQDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHI 343
Query: 366 LAGFREGHFNVLVATDVAS-----------------------------------RGLDIP 390
L F G F+ L+ATD S RG+D
Sbjct: 344 LEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFK 403
Query: 391 NVDLVIHYDLPNNSEIFVHRSGRTGRA 417
V VI++D+P + ++HR GRTGRA
Sbjct: 404 KVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 33/314 (10%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+SE+I+ AL + G P+Q + +D++ A TG+GKTLAF +P + I + N
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 146 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDY-GVDV 204
+ + + + ++PTREL+ Q+ K A LD + M L+ G ++
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHK--VARAVRLD---FAKCREVEADMNTLEEEGANL 138
Query: 205 VVGTPGRIIDLLNRGA-LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFS 263
++GTPGR+ D++ R L+ + ++ ++LDEAD++L +GFQ+ V I+ RLP +R+T +FS
Sbjct: 139 LIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFS 198
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT + L + L NP L ++DQK + L L+ E+ K
Sbjct: 199 ATQTQAVADLAKAGLRNPY---LKCEADQKSSQ-----------------LVHLLIEN-K 237
Query: 324 GGKCIVFTQTKRDADRLSHSMSK--SLKCEAL---HGDISQAQRERTLAGFREGHFNVLV 378
K +VF T D +SK SLK + HG + Q R+ LA F E VL+
Sbjct: 238 NKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLL 297
Query: 379 ATDVASRGLDIPNV 392
TDVA+RGLDIP +
Sbjct: 298 CTDVAARGLDIPGI 311
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 190/407 (46%), Gaps = 38/407 (9%)
Query: 66 DFPYEEGSKNDEGLEIKKLGISEEIVSAL-AKKGISKLFPIQRAVLEPAMQ--GRDMIGR 122
D PY S+ + L +S E++ L + K IQ L M + +I +
Sbjct: 84 DTPYTSASR------FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQ 137
Query: 123 ARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT 182
A G+GKT F + + ++ R+P AL + PTRELA Q E
Sbjct: 138 AHNGSGKTTCFVLGMLSRV------DPTLREPQALCICPTRELANQ-NMEVLQKMGKFTG 190
Query: 183 ICVYGGTPISQQ-----MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQM 237
I P S + R VV+GTPG + + L L ++ +V DEAD M
Sbjct: 191 ITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHM 250
Query: 238 LQI-GFQEDVEKILD---RLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQK 293
L GF++D KI+ R+ P Q L+FSAT +K + + +P + V D
Sbjct: 251 LATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQL-FVKREDLA 309
Query: 294 LADGISLYSIVT-DSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCE 351
L D + Y +V K ++ I E G+ I+F +TK A ++ ++++
Sbjct: 310 L-DSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVT 368
Query: 352 ALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPN-------NS 404
++HG+++++ R++ + F+E VL+ATDV +RG D V+LV++Y+LP +
Sbjct: 369 SVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDY 428
Query: 405 EIFVHRSGRTGRAGKKGTAILVHTED--QSRAIRTIERDVGSKFKEL 449
E+++HR GR GR G+KG + +D + IE+ + KE+
Sbjct: 429 EVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEI 475
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 181/396 (45%), Gaps = 46/396 (11%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI----K 138
++G SE+++ AL ++ + IQ P + G+ I ++G+GKTLA+ +P+ +
Sbjct: 378 EIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLR 437
Query: 139 DKIIKFNAKHGRGRDPLALALAPTRELAKQV---EKEFYDSAPNLDTICVYGGTPISQQM 195
++ ++ ++K G P + L PT ELA QV + S ++ V GG Q+
Sbjct: 438 EEELQGHSKSSPG-CPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQL 496
Query: 196 RQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQML-QIGFQEDVEKILDRLP 254
L+ GVDV++ TPGR L+N G L L ++ +LDE D + F+ ++ +++ P
Sbjct: 497 ENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSP 556
Query: 255 PKRQTLMFSATMPYEI-KQLTRKYLNNPVT----------------IDLVGDSDQKLADG 297
Q L +AT+P EI +L + + V +D GD + +
Sbjct: 557 VTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPE 616
Query: 298 ISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFT---QTKRDADRLSHSM---SKSLKCE 351
+ + K +L I E K I+F +T R + + + + L
Sbjct: 617 TAFQN------KKTALLQ--IMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVL 668
Query: 352 ALHGDISQAQRERTLAGFR----EGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF 407
H +SQ R + F E + LV TD ASRG+D VD V+ +D P + +
Sbjct: 669 PFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEY 728
Query: 408 VHRSGRTGRAGK-KGTA-ILVHTEDQSRAIRTIERD 441
V R GRT R + KG A I V + A R IER+
Sbjct: 729 VRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERN 764
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 57/370 (15%)
Query: 86 ISEEIVSALAKKGISKLFP--IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+ E I+ + + G +FP IQR L GRD I A+TG+GKTL + + I
Sbjct: 83 VPEHILHRMEEIGF--VFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLI------ 134
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVYGGTPISQQMRQLDYG 201
F+ + + A+ + PTREL QV K + +D V G T M LD G
Sbjct: 135 FSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEID---VKGCT----VMALLDGG 187
Query: 202 V-------------DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQML----QIGFQE 244
++V T + +L + + V+ +V+DE D + Q+G
Sbjct: 188 TLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG--- 244
Query: 245 DVEKILDRLPP--KRQTLMFSATMP----YEIKQLTRKYLNNPVTIDLVGDSDQKLADGI 298
V K+L KRQT+ SA++P + + +K+ V V +
Sbjct: 245 SVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLL 304
Query: 299 SLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRD------------ADRLSHSMSK 346
+ + + Q +LA L ++ + V Q+++ + L S
Sbjct: 305 HRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKG 364
Query: 347 SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEI 406
SL+ L GD++ R +L R+G +LV+TD+A+RG+D+P + ++DLP
Sbjct: 365 SLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTD 424
Query: 407 FVHRSGRTGR 416
++HR+GR GR
Sbjct: 425 YLHRAGRAGR 434
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQ 361
+ DS V I A + + +VF T + ++ + K S++C H + +
Sbjct: 403 VTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDE 462
Query: 362 RERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKG 421
R LA FRE V V TD A+RG+D+PNV VI D +++ F+HR GRT RAG+ G
Sbjct: 463 RANILADFRETG-GVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYG 521
Query: 422 TAILVHTE---DQSRAIR 436
T ++TE D AIR
Sbjct: 522 TVTSLYTEANRDLVEAIR 539
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 76 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 135
D + K LG+S+ + AL G + Q + + G+D+I A TG+GKT +
Sbjct: 77 DHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLA 136
Query: 136 PIKDKIIKF---NAKHGRGRDP-----LALALAPTRELAKQVEKEFY-----DSAPNL-- 180
PI D++ + R P ++L L P L +QV + D P L
Sbjct: 137 PIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRV 196
Query: 181 DTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLL----NRGALNLKEVQFMVLDEADQ 236
+ +C G P D D++V TP +++ + NR L+ V+++V DEAD
Sbjct: 197 EAVCGSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADM 248
Query: 237 MLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTID 285
+L FQ + ++++ L + ++ +L + L P+ ID
Sbjct: 249 LLCGSFQNQIIRLINMLRFDEK----------QVSRLAKSNLGRPMEID 287
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 160/405 (39%), Gaps = 84/405 (20%)
Query: 64 VADFPYEEGSKNDEGLEIKKLGISEEI-VSALAKKGISKLFPIQRAVLEPAMQGRDMIGR 122
+ D Y EGS ND+ ++ + ++ V+ G P QR ++ M G D+
Sbjct: 416 IIDVTYTEGS-NDKKWSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVL 474
Query: 123 ARTGTGKTLAFGIP-----------------IKDKIIKFNAKHGRGRDPLALALAPTREL 165
TG GK+L + +P I+D+I+ + P A +L+ E
Sbjct: 475 MPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMNL----LQANIPAA-SLSAGMEW 529
Query: 166 AKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRII--DLLNRGALNL 223
A+Q++ I Q++ ++ TP ++ D L R NL
Sbjct: 530 AEQLK--------------------IFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENL 569
Query: 224 KEVQFM---VLDEADQMLQIG--FQEDVEK--ILDRLPPKRQTLMFSATMPYEIKQ---- 272
+ V+DEA + Q G F+ D + IL + P L +AT +K+
Sbjct: 570 NSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQ 629
Query: 273 --------LTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKG 324
+ R+ N P V +K + I D ++K+
Sbjct: 630 ALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDI-------DKFIKENHF---------- 672
Query: 325 GKC-IVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDV 382
+C I++ ++ D +++S + + K HG + QR + + N++ AT
Sbjct: 673 DECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVA 732
Query: 383 ASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVH 427
G++ P+V VIH+ LP + E + GR GR G++ + +L +
Sbjct: 733 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 777
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 25/235 (10%)
Query: 204 VVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQML----QIGFQEDVEKILDRLPP--KR 257
++V T + +L + + V+ +V+DE D + Q+G V K+L KR
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 102
Query: 258 QTLMFSATMP----YEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI 313
QT+ SA++P + + +K+ V V + + + + Q +
Sbjct: 103 QTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVL 162
Query: 314 LAPLITEHAKGGKCIVFTQTKRD------------ADRLSHSMSKSLKCEALHGDISQAQ 361
LA L ++ + V Q+++ + L S SL+ L GD++
Sbjct: 163 LALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNS 222
Query: 362 RERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
R +L R+G +LV+TD+A+RG+D+P + ++DLP ++HR+GR GR
Sbjct: 223 RAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 146/356 (41%), Gaps = 54/356 (15%)
Query: 98 GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-----------------IKDK 140
GISK Q+ ++ M GRD++ G GK+L + +P I+D+
Sbjct: 86 GISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSPLLSLIQDQ 145
Query: 141 IIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTP--ISQQMRQL 198
++ A G L +E K V K +L + V TP +S+ R +
Sbjct: 146 VMGLAA---LGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYV---TPEKVSKSKRFM 199
Query: 199 DYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIG--FQEDVEK--ILDRLP 254
++ N G L+L + +DEA Q G F+ D + IL
Sbjct: 200 -----------SKLEKCHNAGRLSL-----ISIDEAHCCSQWGHDFRPDYKNLSILKTQF 243
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI- 313
PK + +AT +++ + L+ P + V ++ YS+ S V + +
Sbjct: 244 PKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNL----FYSVREKSAVGKLVV 299
Query: 314 --LAPLITE-HAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGF 369
+A I E ++ IV+ ++++ ++++ + + + + H D+ RE+ +
Sbjct: 300 DEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRW 359
Query: 370 REGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
+ V+V T G++ P+V VIH+ L + E + SGR GR G IL
Sbjct: 360 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECIL 415
>AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1390
Length = 1390
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 358 SQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRA 417
SQ ++ L FR G FNV+VAT + GLDI VDLVI +D + + R GRTGR
Sbjct: 512 SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRK 571
Query: 418 GKKGTAILV 426
G +LV
Sbjct: 572 N-NGRPLLV 579
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 217 NRGALNLKEVQFMVLDEADQMLQIG--FQEDVEK--ILDRLPPKRQTLMFSATMPYEIKQ 272
N G L+L + +DEA Q G F+ D + IL PK + +AT +++
Sbjct: 82 NAGRLSL-----ISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQN 136
Query: 273 LTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI---LAPLITE-HAKGGKCI 328
+ L+ P + V ++ YS+ S V + + +A I E ++ I
Sbjct: 137 DLIEMLHIPKCVKFVSSVNRPNL----FYSVREKSAVGKLVVDEIAEFIRESYSNNESGI 192
Query: 329 VFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGL 387
V+ ++++ ++++ + + + + H D+ RE+ + + V+V T G+
Sbjct: 193 VYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGI 252
Query: 388 DIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
+ P+V VIH+ L + E + SGR GR G IL
Sbjct: 253 NKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECIL 290
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 358 SQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
SQ ++ L FR G FNV+VAT + GLDI VDLVI +D + + R GRTGR
Sbjct: 512 SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGR 570
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 353 LHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSG 412
L+ D+ + +R L F+ VLV ++ + GL+ DL++ +LP ++ + HR+G
Sbjct: 655 LNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAG 714
Query: 413 RTGRAGKKGTAILVHTEDQ 431
R R G+K T + V E Q
Sbjct: 715 RMRRPGRKMTVVTVCEESQ 733
>AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079
FORWARD LENGTH=1910
Length = 1910
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 335 RDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDL 394
R A + H+ S+ +K +Q + T++ FR+GH +LVAT VA GLDI ++
Sbjct: 694 RCASMIGHNNSQEMK---------SSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNV 744
Query: 395 VIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAV 454
V+ +DL ++ GRA K G+ ++ E + + R+ + + L K A+
Sbjct: 745 VMRFDLAKTVLAYIQSR---GRARKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAI 801
Query: 455 DRASV 459
+R +
Sbjct: 802 ERTDL 806
>AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60,
ATDCL1 | dicer-like 1 | chr1:23519-31079 FORWARD
LENGTH=1909
Length = 1909
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 335 RDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDL 394
R A + H+ S+ +K +Q + T++ FR+GH +LVAT VA GLDI ++
Sbjct: 694 RCASMIGHNNSQEMK---------SSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNV 744
Query: 395 VIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAV 454
V+ +DL ++ GRA K G+ ++ E + + R+ + + L K A+
Sbjct: 745 VMRFDLAKTVLAYIQSR---GRARKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAI 801
Query: 455 DRASV 459
+R +
Sbjct: 802 ERTDL 806
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 151 GRDPLALALAPTRELAKQVEKEFYD-SAPNLDTICVYGGTPISQQMRQL-DYGVDVVVGT 208
G P L L P++ A QV + T+ ++ G P+ Q+ L + +V T
Sbjct: 194 GNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVAT 253
Query: 209 PGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPY 268
P R+++++ +++ V +V+DE + G+ V+ I + K QT++F+ +
Sbjct: 254 PERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFSA 313
Query: 269 EIKQLTRKYLNNPVTIDLVGDS 290
I + +L V V +S
Sbjct: 314 SIIPAVQSFLGGSVNRVTVNES 335
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 328 IVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRG 386
IV+ + + + D +S + ++ + H + R R F V+VAT G
Sbjct: 490 IVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMG 549
Query: 387 LDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVG 443
LD +V VIH+ +P + E +V GR GR G+ L + D +R++ G
Sbjct: 550 LDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSLAHSDG 606
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 324 GGKC-IVFTQTKRDADRLS-HSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATD 381
G C I++ + D LS H S + A H ++ R L + ++VAT
Sbjct: 255 GNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATV 314
Query: 382 VASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERD 441
G+D +V +V H+++P + E F SGR GR ++L + D + + + R+
Sbjct: 315 AFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN 374