Miyakogusa Predicted Gene
- Lj2g3v3059690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3059690.1 tr|Q2HSE6|Q2HSE6_MEDTR Pentatricopeptide repeat
OS=Medicago truncatula GN=MTR_7g016910 PE=4
SV=1,69.15,0,PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; PPR:
p,NODE_37265_length_3067_cov_19.178024.path2.1
(788 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 850 0.0
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 2e-42
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 161 1e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 1e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 2e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 1e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 150 3e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 4e-35
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 3e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 5e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 139 6e-33
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 9e-33
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 136 4e-32
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 136 7e-32
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 7e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 9e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 1e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 7e-30
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 1e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 4e-29
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 127 4e-29
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 124 2e-28
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 6e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 121 2e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 121 2e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 121 2e-27
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 5e-27
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 1e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 7e-26
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-25
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 111 2e-24
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 111 2e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 111 2e-24
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 4e-23
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 9e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 105 1e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 4e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 9e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 92 1e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 92 2e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 6e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 7e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 8e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 8e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 8e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 8e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 87 4e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 86 1e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 1e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 1e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 8e-15
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 78 3e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 77 4e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 77 4e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 77 6e-14
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 76 1e-13
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 2e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 74 3e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 3e-13
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 73 7e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 73 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 72 1e-12
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 72 1e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 2e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 2e-12
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 70 6e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 70 8e-12
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 69 2e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 68 2e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 67 3e-11
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 66 8e-11
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 61 3e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 3e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 4e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 60 4e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 60 4e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 60 5e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 7e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 59 9e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 59 9e-09
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 1e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 57 4e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 55 2e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 55 2e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 3e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 4e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 54 6e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 8e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 1e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/803 (54%), Positives = 547/803 (68%), Gaps = 55/803 (6%)
Query: 6 QVGELLLVASITNSLSKSKSKSCAPVLNLLPPQHKQLLTEPVILQILSNPTLHPSHKLHF 65
Q+ +LLVAS++ +LS+S ++S N +P ++EPV+LQIL ++ PS KL F
Sbjct: 26 QLCNVLLVASLSKTLSQSGTRSLDA--NSIP------ISEPVVLQILRRNSIDPSKKLDF 77
Query: 66 FNWCRSHHSS-PLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSL 124
F WC S S +AYS I R++ R S+K+D V L LL SL
Sbjct: 78 FRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSL 137
Query: 125 IISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXX 184
I S F L +LDY+++ L P +Y+S+LIA ++ + + LA SI KL+E
Sbjct: 138 IRSGKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKKHELRLALSILFKLLE---- 190
Query: 185 XXXXXXXXAALDSNSNSNS------------IAFNQLLVALRKADMKLEFQQVFHKLMDK 232
A D++S+ ++ +A N+LLV LR+ADM+ EF++VF KL
Sbjct: 191 ---------ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM 241
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----------GPDLCTYNCLISVLCK 282
K F DTW YNICIH FGCWGDL + SLF +M GPD+CTYN LI VLC
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCL 301
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
GK KDALIVW++L H+PD+ TY LIQGCCK+Y++D A RI+ +M NGF P TIV
Sbjct: 302 FGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN LLD KA KV+EACQLFEKM QEGV+ASC TYNILI GL +NGR EA +TLFCDLK
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
KKGQFVD IT+SI+ LQ RGF VDLVTI+SL++G HK GRWD
Sbjct: 422 KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ 522
W ++LMKH+REG+LVP VLRW AG+EAS+K P SK KDY+PMFPSKG F +IMS++ GS+
Sbjct: 482 WKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMV-GSE 540
Query: 523 DANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI 582
D + + + E D WS SP+MD+LA+Q LF GQRV+ K DSFD+
Sbjct: 541 DDGASAEE--VSPMEDDPWSSSPYMDQLAHQ---RNQPKPLFGLARGQRVEAK-PDSFDV 594
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGV-DPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
DM+NTFLSI+L+KG LSLACKLFEIF GV D SYTYNS+MSSFVKKGYF A ++
Sbjct: 595 DMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLD 654
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+M E C ADIATYN+IIQGLGK+GRADLASA+LDRL KQGGYLDIVMYNTLINALGKA
Sbjct: 655 QMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKAT 714
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
R+DE + F+ MKS+GINPDVV+YNT+IEV+SKAG LK+AYK+LK MLDAGC PNHVTDT
Sbjct: 715 RLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDT 774
Query: 762 TLDYLGREIDKLRYQKASILNEK 784
LDYLG+E++K R++KAS + K
Sbjct: 775 ILDYLGKEMEKARFKKASFVRNK 797
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 239/540 (44%), Gaps = 30/540 (5%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
YN+CI +FG G + ++ FH++ PD TY +I VLCK ++ +A+ ++E L
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
P + Y T+I G K D A + + G P I YN +L L K KV
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
EA ++FE+M ++ + TYNILI L + G+ + A+ L ++K G F + T +I+V
Sbjct: 361 EALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 418 LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLV 477
+ + D +T SL+ G+ K GR D ++ + + + D
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 478 PKVLRWKAGMEASIKN--PPSKKKDYSPMFPS--KGDFSEIMSILTGSQDANLDSHDTKI 533
+ + + IKN +K+D ++ + S + +L D +
Sbjct: 480 TNSIVYTS----LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG---- 531
Query: 534 EDEEGDEWSLSPHMDKLANQVKS----------SGYASQLFTPTPGQRVQQKGSDSFDID 583
E E+G + +S +G+A++ + + Q D
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ---GCVLDTR 588
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
N + F GK++ A +L E G +P TY S++ K +EA+ + E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
K ++ Y+ +I G GK+GR D A IL+ L+++G ++ +N+L++AL KA I
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+E F+ MK P+ VTY LI K A+ F + M G P+ ++ TT+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 227/547 (41%), Gaps = 73/547 (13%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
IA+N +L LRK E +VF ++ KK A + YNI I G L T+F L
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
M P++ T N ++ LCK K+ +A ++E+++ PD T+ +LI G K
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
++D A +++ +M ++ R +IVY SL+ F + + ++++ M + Q N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
+ + K G PE +F ++K + D +YSI++ +
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G V+D ++ G K G+ + +L++ + K K
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-------------------------KTK 616
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+ P + G S++ G A +D D
Sbjct: 617 GFEPTVVTYG------SVIDGL--AKIDRLDE---------------------------- 640
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
A LF +R++ ++ + ++ + F G++ A + E + G+ P YT
Sbjct: 641 AYMLFEEAKSKRIE------LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+NS++ + VK NEA M E C + TY ++I GL K+ + + A +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
KQG + Y T+I+ L KAG I E F++ K++G PD YN +IE S
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 740 DAYKFLK 746
DA+ +
Sbjct: 815 DAFSLFE 821
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 234/559 (41%), Gaps = 33/559 (5%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKL 283
++M K F Y I AF +LF QM P + + LI K
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G+V AL + +++ + + D Y I K K+D A + F+++ NG +P + Y
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
S++ VL KA ++ EA ++FE + + YN +I G G+ + AY+L +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
KG I Y+ I L + +L T L+ + + G+ D
Sbjct: 337 KGSIPSVIAYNCI-LTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPP-------SKKKDYSPMFPSKGDFSEIMS 516
L +++ L P V ++ K+ ++ DY P + F ++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 517 IL--TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT---PTPGQR 571
L G D ++ ++ D N + + F G +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDS------------DCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 572 VQQKGSD---SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
+ + + S D+ ++NT++ G+ +FE P + +Y+ ++ +
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
K G+ NE + + M E+ C D YN++I G K G+ + A +L+ + +G +V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
Y ++I+ L K R+DE FE+ KS I +VV Y++LI+ K G + +AY L+ +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 749 LDAGCTPNHVT-DTTLDYL 766
+ G TPN T ++ LD L
Sbjct: 684 MQKGLTPNLYTWNSLLDAL 702
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 153/663 (23%), Positives = 274/663 (41%), Gaps = 48/663 (7%)
Query: 114 PQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFS 173
P+S+N LL + NF QIL + P I +++ ++ N + +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGF-GPSVNTCI--EMVLGCVKANKLREGYD 154
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLE-FQQVFHKLMDK 232
+ ++++ F + + S A+ +DM L FQQ M +
Sbjct: 155 V-VQMMRKFKFRPAFSAYTTLIGAFS------------AVNHSDMMLTLFQQ-----MQE 196
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKD 288
G+ + I F G + ++ SL +M D+ YN I K+GKV
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A + ++ A +PD TYT++I CK ++D A +F + N P T YN+++
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
A K EA L E+ +G S YN ++ L K G+ + A +F ++KK
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-P 375
Query: 409 DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM 468
+ TY+I++ G ++ T+ ++ + K + D +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 469 KHVREGDLVPKVLRWKAGMEA--SIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL 526
+ + P + + + ++ + K Y M S SI+ S N
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD---CRTNSIVYTSLIKNF 492
Query: 527 DSHDTKIEDEEGDE-------WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDS 579
+H K E+G + + SP + L + A + P G+ + ++
Sbjct: 493 FNHGRK---EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE---PEKGRAMFEEIKAR 546
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIF---TEAGVDPVSYTYNSIMSSFVKKGYFNEA 636
+ ++ + K A + +E+F E G + YN ++ F K G N+A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
+ ++ EM K + TY +I GL KI R D A + + + L++V+Y++LI+
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
GK GRIDE E++ G+ P++ T+N+L++ KA + +A + M + CTPN
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 757 HVT 759
VT
Sbjct: 727 QVT 729
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/580 (20%), Positives = 223/580 (38%), Gaps = 52/580 (8%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIH-AFGC--WGDLATSFSL 261
++N LL+ + + Q+ + M GF N CI GC L + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGE-MSVAGFGPSV---NTCIEMVLGCVKANKLREGYDV 155
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
M P Y LI + L +++ + ++P +TTLI+G K
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
++D A + ++M ++ ++YN +D K KV A + F ++ G+K T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
Y +I L K R + A +F L+K + Y+ +++
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
+G + ++ ++ + K G+ D ++ + +++ D P + + ++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILID--------- 385
Query: 498 KKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
M G + Q A L + + + D S +D+ +
Sbjct: 386 ------MLCRAGKLDTAFELRDSMQKAGL-FPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL---ACKLFEIFTEAGVD 614
Y ++ TP D + TF S+ GK+ A K++E ++
Sbjct: 439 DY--KVCTP----------------DEI-TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
S Y S++ +F G + I +M + C D+ N + + K G + A+
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ + + D Y+ LI+ L KAG +E + F MK G D YN +I+ K
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREIDKL 773
G + AY+ L+ M G P VT + +D L + ID+L
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK-IDRL 638
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ + ++ L K D E +F + K+ L+ Y+ I FG G + ++ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
++ P+L T+N L+ L K ++ +AL+ ++ + P+ TY LI G CK
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K + A + +M G +P TI Y +++ L KA ++EA LF++ G YN
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKG 405
+I GL R A++LF + +++G
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 33/357 (9%)
Query: 58 HPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSF 117
P F ++ P + S YS+++ L + F S+K+ VL +++
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARS-YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 118 NPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFL- 176
N ++ ++ Q+L+ ++ + +P T + Y S++ + + + A+ +F
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGF-EP--TVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 177 ---KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
K IEL N + ++ L+ K E + +LM +K
Sbjct: 648 AKSKRIEL--------------------NVVIYSSLIDGFGKVGRIDEAYLILEELM-QK 686
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
G + + +N + A ++ + F M P+ TY LI+ LCK+ K A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ W+++ +P +YTT+I G K I A +F++ NG P + YN++++
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
L + +A LFE+ + G+ +T +L+ L KN E A + L++ G+
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGK 863
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 28/332 (8%)
Query: 80 SAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDY 139
S Y++++ L R S+++ + + ++ N ++ L S E + +
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 140 IQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS 197
+ + CTP + + SL+ + + A+ ++ K+ LDS
Sbjct: 438 MDYKV-----CTPDEITFCSLIDGLGKVGRVDDAYKVYEKM----------------LDS 476
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLAT 257
+ +NSI + L+ K + +++ ++++ + D N + G+
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-CSPDLQLLNTYMDCMFKAGEPEK 535
Query: 258 SFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
++F ++ PD +Y+ LI L K G + ++ + D Y +I
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G CK K++ A ++ +M GF P + Y S++D L K ++ EA LFE+ + ++
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+ Y+ LI G K GR + AY + +L +KG
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 225/497 (45%), Gaps = 38/497 (7%)
Query: 270 LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
L TYN LI+ C+ ++ AL + + ++P T ++L+ G C +I A + +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 330 QMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
QM G+RP TI + +L+ LF K SEA L ++M Q G + + TY ++++GL K G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTIT 449
+ A L ++ D + ++ I+ +G ++VT +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 450 SLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFPS 507
SL+ + +GRW +L+ + E + P ++ + A ++A +K +K Y M
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
S D ++ ++++ + + + + +DK A Q+F
Sbjct: 360 -------------SIDPDIFTYNSLV-----NGFCMHDRLDK----------AKQMFEFM 391
Query: 568 PGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
+ D F D+ NT + F ++ +LF + G+ + TY +++
Sbjct: 392 VSK-------DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD 686
G + A + +M P DI TY++++ GL G+ + A + D + K LD
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
I +Y T+I + KAG++D+ F + G+ P+VVTYNT+I LL++AY LK
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 747 MMLDAGCTPNHVTDTTL 763
M + G PN T TL
Sbjct: 565 KMKEDGPLPNSGTYNTL 581
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 189/456 (41%), Gaps = 32/456 (7%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y +++ K+D A +F M + P + +N LL + K K L EKM
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ + TYNILI+ + + A L + K G +T S ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
G+ D +T T+L+ G+ H + L+ + + P ++ + +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
K +GD +++L + A +++ D I + D H+
Sbjct: 233 NGLCK---------------RGDTDLALNLLNKMEAAKIEA-DVVIFNTIIDSLCKYRHV 276
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
D N K T G R ++ ++ +S + G+ S A +L
Sbjct: 277 DDALNLFKE--------METKGIRP--------NVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
E ++P T+N+++ +FVK+G F EA + +M ++ DI TYN ++ G R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
D A + + ++ + + D+V YNTLI K+ R+++ + F +M G+ D VTY T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
LI+ G +A K K M+ G P+ +T + L
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 136/605 (22%), Positives = 238/605 (39%), Gaps = 81/605 (13%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFL 176
FN LL ++ F + + + +Q+ ++ T YN L+ R + I LA ++
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT---YNILINCFCRRSQISLALALLG 144
Query: 177 KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFA 236
K+++L + + + S N R +D Q M + G+
Sbjct: 145 KMMKL------------GYEPSIVTLSSLLNGYCHGKRISDAVALVDQ-----MVEMGYR 187
Query: 237 LDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIV 292
DT + IH + + +L +M P+L TY +++ LCK G AL +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 293 WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
+ A + D + T+I CK +D A +F +M G RP + Y+SL+ L
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
+ S+A QL M ++ + + T+N LI +K G+ A L+ D+ K
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK--------- 358
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
R D+ T SL+ G H R D ++ + +
Sbjct: 359 --------------------------RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSK------GDFSEIMSILTG-SQDAN 525
D P V+ + ++ K+ + +D + +F GD +++ G D +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKS--KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 526 LDSHDTKIED--EEG---DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF 580
D+ + +G D + S +D L N K A ++F QK
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK-ALEVFD------YMQKSEIKL 503
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI + T + GK+ LF + GV P TYN+++S K EA+A++
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M E + TYN +I+ + G ASA L R ++ ++ L+ +
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDK-AASAELIREMRSCRFVGDASTIGLVANMLHD 622
Query: 701 GRIDE 705
GR+D+
Sbjct: 623 GRLDK 627
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 221/536 (41%), Gaps = 24/536 (4%)
Query: 204 IAFNQLLVA---LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+ FN+LL A ++K D+ + + +L G + YNI I+ F ++ + +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YTYNILINCFCRRSQISLALA 141
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
L +M P + T + L++ C ++ DA+ + + + ++PD T+TTLI G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K A + ++M G +P + Y +++ L K A L KM ++A
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
+N +I L K + A LF +++ KG + +TYS ++
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA-SIKNPP 495
+ +LVT +L+ K G++ ++L + + + P + + + + + +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 496 SKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE-WSLSPHMDKLANQV 554
K K SK F ++++ T + ++ED G E + H + + V
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGF---CKSKRVED--GTELFREMSHRGLVGDTV 436
Query: 555 KSSGYASQLFTPTP---GQRV-QQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIF 608
+ LF Q+V +Q SD DI + L GKL A ++F+
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
++ + Y Y +++ K G ++ W + + K ++ TYN +I GL
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
A A+L ++ + G + YNTLI A + G + +M+S D T
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 24/291 (8%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+FN L+ + + F E ++ D + +R + P YNSL+ ++ + A +F
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDI--FTYNSLVNGFCMHDRLDKAKQMF 388
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
++ + + + +N L+ K+ + ++F + M +G
Sbjct: 389 EFMVS----------------KDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE-MSHRGL 431
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALI 291
DT Y I GD + +F QM PD+ TY+ L+ LC GK++ AL
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
V++ + + D + YTT+I+G CK K+D +F + G +P + YN+++ L
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
+ EA L +KM ++G + TYN LI +++G A+ L +++
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 145/626 (23%), Positives = 271/626 (43%), Gaps = 90/626 (14%)
Query: 144 HLLQPGCTPLIYNSLLIASL------RNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS 197
+L+ G + L Y+S+ A L RN + + + + L E + + S
Sbjct: 17 QILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFE------------SMIQS 64
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLAT 257
I FN+L A+ + + + F K M+ G D + I I+ + L
Sbjct: 65 RPLPTPIDFNRLCSAVARTK-QYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLF 123
Query: 258 SFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+FS+ + PD T++ L++ C G+V +A+ + + + +PD T +TLI
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G C ++ A + ++M GF+P + Y +L+ L K+ + A LF KM + +KA
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
S Y+I+I L K+G + A +LF +++ KG D +TYS
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS------------------- 284
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
SL+ G+ G+WD ++++ + +++P V+ + A ++ +K
Sbjct: 285 ----------------SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 494 PPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQ 553
+ +K ++E+++ D + + +D +
Sbjct: 329 --------GKLLEAKELYNEMIT-----------------RGIAPDTITYNSLIDGFCKE 363
Query: 554 VKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGV 613
A+Q+F + KG + DI + ++ + ++ +LF + G+
Sbjct: 364 -NCLHEANQMF-----DLMVSKGCEP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
P + TYN+++ F + G N A + EM + P + TY +++ GL G + A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
I +++ K L I +YN +I+ + A ++D+ F + G+ PDVVTYN +I
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVT 759
K G L +A + M + GCTP+ T
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFT 562
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 65/405 (16%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+ + L++ L + E L ++D + + + QP + Y +L ++ + LA +F
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVE-YGFQP--DEVTYGPVLNRLCKSGNSALALDLF 233
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
K+ E N ++ + ++ ++ +L K + +F++ M+ KG
Sbjct: 234 RKMEE----------------RNIKASVVQYSIVIDSLCKDGSFDDALSLFNE-MEMKGI 276
Query: 236 ALDTWGYNICIHAF---GCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKD 288
D Y+ I G W D A + +M G PD+ T++ LI V K GK+ +
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGA---KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCK------------------------TY----- 319
A ++ ++ PD TY +LI G CK TY
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 320 ------KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
++D R+F ++ + G P TI YN+L+ ++ K++ A +LF++M GV
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
S TY IL+ GL NG A +F ++K + Y+II+
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+G D+VT ++ G+ K G D L + ++E P
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G +LA LF E + Y+ ++ S K G F++A ++ EM K AD+ TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+ +I GL G+ D + +L ++ + D+V ++ LI+ K G++ E + + +M +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
GI PD +TYN+LI+ K L +A + +M+ GC P+ VT + L
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ V+T ++ KG++S A L + E G P TY +++ K G A +
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M E+ A + Y+++I L K G D A ++ + + +G D+V Y++LI L
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G+ D+ K +M I PDVVT++ LI+V K G L +A + M+ G P+ +T
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 761 TTL 763
+L
Sbjct: 354 NSL 356
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 203 SIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
SI N A R D F+++ KG +T YN + F G L + LF
Sbjct: 389 SILINSYCKAKRVDDGMRLFREI-----SSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 263 HQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
+M P + TY L+ LC G++ AL ++E + Y +I G C
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
K+D A +F + + G +P + YN ++ L K +SEA LF KM ++G TY
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
NILI + ++ L ++K G D T +++
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+T ++ F +G++S A L + E P T +++++ KG +EA +I M E
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D TY ++ L K G + LA + ++ ++ +V Y+ +I++L K G D+
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ GI DVVTY++LI G D K L+ M+ P+ VT + L
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + ++ + K KL A + + G +P + T++++++ F +G +EA A++
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M E D+ T + +I GL GR A ++DR+++ G D V Y ++N L K+
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G F +M+ I VV Y+ +I+ K G DA M G + VT
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 761 TTL 763
++L
Sbjct: 284 SSL 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
++F K M K L YNI IH + ++SLF + PD+ TYN +I
Sbjct: 476 EIFEK-MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
LCK G + +A +++ + PD FTY LI+ + + + +M GF
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 340 TIVYNSLLDVL 350
+ ++D+L
Sbjct: 595 SSTIKMVIDML 605
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 229/512 (44%), Gaps = 34/512 (6%)
Query: 254 DLATSFSLFHQMPGP--DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
DL SF ++ G +L TYN +I+ LC+ ++ AL + + + P T +L
Sbjct: 82 DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL 141
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
+ G C +I A + +QM G++P T+ + +L+ LF+ K SEA L E+M +G
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
+ TY +I+GL K G P+ A L ++K D + YS ++
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
+G D+ T +SL+ + +GRW RL+ + E + P V+ + + ++A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
K + ++ F E ++ S D N+ ++++ I + + + +D+
Sbjct: 322 KE--------GKLIEAEKLFDE---MIQRSIDPNIVTYNSLI-----NGFCMHDRLDE-- 363
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
A Q+FT + D+ NT ++ F K+ +LF +
Sbjct: 364 --------AQQIFTLMVSKDCLP------DVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G+ + TY +++ F + + A + +M +I TYN ++ GL K G+ + A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+ + L K DI YN + + KAG++++ F + G+ PDV+ YNT+I
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K GL ++AY M + G P+ T TL
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 5/227 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L+ N N + FN L+ A K +E +++F +++ ++ + YN I+ F
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI-QRSIDPNIVTYNSLINGFCMHDR 360
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L + +F M PD+ TYN LI+ CK KV D + ++ D++ + TYTT
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI G + D+A +F QM ++G P + YN+LLD L K K+ +A +FE + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++ TYNI+ G+ K G+ E + LFC L KG D I Y+ ++
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/572 (22%), Positives = 231/572 (40%), Gaps = 69/572 (12%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQR-----------HLLQPGCTPLIY--NSLLIAS 162
SF + L +SHN + +++ + +R +++ G P I NSLL
Sbjct: 86 SFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF 145
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
N I A ++ +++E+ +++ F L+ L + + E
Sbjct: 146 CHGNRISEAVALVDQMVEM----------------GYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLIS 278
+ +++ KG D Y I+ G+ + +L ++M D+ Y+ +I
Sbjct: 190 VALVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
LCK V DAL ++ +++ +PD FTY++LI C + A+R+ + M P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+ +NSL+D K K+ EA +LF++M Q + + TYN LI+G + R + A +F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
+ K D +TY+ ++ RG V + VT T+L+ G +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
D + K + + P ++ + ++ KN G + M +
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN---------------GKLEKAMVVF 473
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK-SSGYASQLFTPTPGQRVQQKGS 577
Q + + E D ++ + + + K G+ LF + V+
Sbjct: 474 EYLQKSKM----------EPDIYTYNIMSEGMCKAGKVEDGW--DLFCSLSLKGVKP--- 518
Query: 578 DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
D+ NT +S F KG A LF E G P S TYN+++ + ++ G +
Sbjct: 519 ---DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+I EM D +TY ++ L GR D
Sbjct: 576 ELIKEMRSCRFAGDASTYGLVTDMLHD-GRLD 606
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 182/444 (40%), Gaps = 32/444 (7%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+D A +F +M + P + ++ LL + K K EKM GV + TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+I+ L + + A + + K G +T + ++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G+ D VT T+L+ G+ +H + L++ + P ++ + A + K
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK------- 217
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+G+ +++L + +++ D I D H+D N
Sbjct: 218 --------RGEPDLALNLLNKMEKGKIEA-DVVIYSTVIDSLCKYRHVDDALN------- 261
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
LFT + ++ D+ ++ +S G+ S A +L E ++P T
Sbjct: 262 ---LFTEMDNKGIRP------DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+NS++ +F K+G EA + EM ++ +I TYN +I G R D A I ++
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ D+V YNTLIN KA ++ + + F M G+ + VTY TLI +A
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
+A K M+ G PN +T TL
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTL 456
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 216/497 (43%), Gaps = 39/497 (7%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
DL TY+ I+ C+ ++ AL V + ++PD T ++L+ G C + +I A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM G++P T + +L+ LF K SEA L ++M Q G + TY +++GL K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G + A L ++ + + ++ I+ +G ++VT
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSK 508
SL+ + +GRW RL+ ++ E + P V+ + A ++A F +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA---------------FFKE 341
Query: 509 GDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP 568
G E + EE + S+ P D + + +G+
Sbjct: 342 GKLVEAEKL-----------------HEEMIQRSIDP--DTITYNLLINGFCMHNRLDEA 382
Query: 569 GQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
Q + S +I NT ++ F ++ +LF ++ G+ + TY +I+
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD 686
F + G + A + +M P DI TY++++ GL G+ D A I L K L+
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
I +YNT+I + KAG++ E F S I PDVVTYNT+I LL++A +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 747 MMLDAGCTPNHVTDTTL 763
M + G PN T TL
Sbjct: 560 KMKEDGTLPNSGTYNTL 576
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 194/501 (38%), Gaps = 78/501 (15%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M + G+ DT+ + IH + + +L QM PDL TY +++ LCK G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ AL + + A + + + T+I CK ++ A +F +M G RP + YNS
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ L + S+A +L M ++ + + T+N LI K G+ A L ++ ++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
D ITY++++ GF + H R D
Sbjct: 359 IDPDTITYNLLI---------------------NGFCM--------------HNRLDEAK 383
Query: 466 RLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDAN 525
++ K + D +P + + + K + +D +F + N
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCK--CKRVEDGVELFREMSQRGLV---------GN 432
Query: 526 LDSHDTKIED--EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDID 583
++ T I+ + GD S A +F RV DI
Sbjct: 433 TVTYTTIIQGFFQAGDCDS-----------------AQMVFKQMVSNRVPT------DIM 469
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+ L + GKL A +F+ ++ ++ + YN+++ K G EAW + +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
K D+ TYN +I GL A + ++ + G + YNTLI A +
Sbjct: 530 SIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 704 DEVNKFFEQMKSSGINPDVVT 724
+ ++M+SSG D T
Sbjct: 587 AASAELIKEMRSSGFVGDAST 607
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+F L+H L + + E + ++D + QR GC P + Y +++ + I LA +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQR-----GCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ K+ + +N + FN ++ +L K +E M+ K
Sbjct: 245 LLNKMEA----------------ARIKANVVIFNTIIDSLCKYR-HVEVAVDLFTEMETK 287
Query: 234 GFALDTWGYNI---CIHAFGCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G + YN C+ +G W D + S + + P++ T+N LI K GK+ +A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ E++ + PD TY LI G C ++D A ++F M + P YN+L++
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K +V + +LF +M+Q G+ + TY +I G + G ++A +F + D
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 410 GITYSIIV 417
+TYSI++
Sbjct: 468 IMTYSILL 475
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 8/227 (3%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L+ N N + FN L+ A K +E +++ H+ M ++ DT YN+ I+ F
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKL-HEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L + +F M P++ TYN LI+ CK +V+D + ++ +++ + TYTT
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
+IQG + D A +F QM +N + Y+ LL L K+ A +F+ + +
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++ + YN +I G+ K G+ A+ LFC L K D +TY+ ++
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMI 542
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +N L+ K + ++F + M ++G +T Y I F GD ++ +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFRE-MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F QM D+ TY+ L+ LC GK+ AL++++ L + + F Y T+I+G CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+ A +F + +P + YN+++ L + EA LF KM ++G + T
Sbjct: 516 AGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
YN LI +++ A+ L +++ G D T S++
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 569 GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
G+++Q G S D+ + F++ F + +LSLA + + G +P T +S+++ +
Sbjct: 106 GEQMQTLGI-SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
++A A++ +M E D T+ +I GL +A A A++D+++++G D+V
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 689 MYNTLINALGKAGRID----EVNK-------------------------------FFEQM 713
Y T++N L K G ID +NK F +M
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++ GI P+VVTYN+LI G DA + L ML+ PN VT
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++ + ++ +A Q VF +++ + D Y+I +H +G L T+ +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 262 FHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F + ++ YN +I +CK GKV +A W+ + + +PD TY T+I G C
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCS 547
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A +F +M +G P + YN+L+ + + + +L ++M G T
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Query: 378 YNILIHGLIKNGRPEAAY 395
+ L+ ++ +GR + ++
Sbjct: 608 IS-LVTNMLHDGRLDKSF 624
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A +GD+ S P P + +N L+S + K+ K + + + E + D +T
Sbjct: 67 AVDLFGDMVKS------RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y+ I C+ ++ A + +M G+ P + +SLL+ + ++S+A L ++M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ G K T+ LIHGL + + A L + ++G D +TY +V
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
K+ A LF ++ P +N ++S+ K F ++ +M D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+ I + + LA A+L +++K G DIV ++L+N + RI + +QM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 717 GINPDVVTYNTLIE---VHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G PD T+ TLI +H+KA +A + M+ GC P+ VT T+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTV 229
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N LS K L L E G+ YTY+ ++ F ++ + A A++ +M +
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
DI T + ++ G R A A++D++++ G D + TLI+ L + E
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
+QM G PD+VTY T++ K G + A L M A N V +T +D
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 765 YLGR 768
L +
Sbjct: 267 SLCK 270
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 139/579 (24%), Positives = 251/579 (43%), Gaps = 41/579 (7%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF-SLFH 263
++ L+ A + E VF K M++ G YN+ ++ FG G SL
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKK-MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 264 QMP----GPDLCTYNCLISVLCKLGKV-KDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
+M PD TYN LI+ CK G + ++A V+E++ A D TY L+ K+
Sbjct: 269 KMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
++ A ++ N+M NGF P + YNSL+ + + EA +L +MA++G K TY
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
L+ G + G+ E+A ++F +++ G + T++ +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
G D+VT +L+ ++G + K ++ VP+ + + A
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA--------- 498
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDA----NLDSHDTKIED-EEGDEWSLS----PHMDK 549
+ G F + M++ DA +L +++T + G W S M+
Sbjct: 499 ------YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDID---------MVNTFLSIFLAKGKLSL 600
+ Y S L G+ + S + ++ ++ T + + L
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A + F E G P T NS++S + ++ +A ++ M E+ +ATYN ++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
+ + IL +L +G DI+ YNT+I A + R+ + ++ F +M++SGI P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
DV+TYNT I ++ + ++A ++ M+ GC PN T
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/704 (20%), Positives = 280/704 (39%), Gaps = 85/704 (12%)
Query: 63 LHFFNWC--RSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPL 120
L F+W + + S L S ++I+ L + +++D L S+ L
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 121 LHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKL 178
+ + S + E + + + + + GC P + YN +L
Sbjct: 215 ISAFANSGRYREAVNVF-----KKMEEDGCKPTLITYNVIL------------------- 250
Query: 179 IELFXXXXXXXXXXAALDSNSNSNSIA-----FNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F +L S+ IA +N L+ ++ + E QVF + M
Sbjct: 251 -NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE-MKAA 308
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
GF+ D YN + +G + + ++M P + TYN LIS + G + +A
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + + +PD FTYTTL+ G + K++ A IF +M N G +P +N+ + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K +E ++F+++ G+ T+N L+ +NG +F ++K+ G +
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMK 469
T++ ++ G DL T +++ + + G W+ +++++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 470 HVREGDLVPKVLRWKA-------GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ 522
+ +G P L + + G E + + +++ YS + + + + ++
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKC 607
Query: 523 DANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI 582
D L P ++ +++K G F+P DI
Sbjct: 608 D-------------------LLPEAERAFSELKERG-----FSP--------------DI 629
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
+N+ +SI+ + ++ A + + E G P TYNS+M + F ++ I+ E
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
+ K DI +YN +I + R AS I + G D++ YNT I +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
+E M G P+ TYN++++ + K +A F++
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 227/546 (41%), Gaps = 80/546 (14%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGK 285
+ + GF+LD + Y I AF G + ++F +M P L TYN +++V K+G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 286 VKDALI-VWEDLNACAHQPDHFTYTTLIQGCCKTYKI-DHATRIFNQMHNNGFRPGTIVY 343
+ + + E + + PD +TY TLI CCK + A ++F +M GF + Y
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N+LLDV K+ + EA ++ +M G S TYN LI ++G + A L + +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
KG D TY T+L+ G + G+ +
Sbjct: 378 KGTKPDVFTY-----------------------------------TTLLSGFERAGKVES 402
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQD 523
+ + +R P + + A + M+ ++G F+E+M I
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNA---------------FIKMYGNRGKFTEMMKIF----- 442
Query: 524 ANLDSHDTKIEDEEGDEWSLSPHM---DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF 580
+E + LSP + + L +G S++ + + ++
Sbjct: 443 ------------DEINVCGLSPDIVTWNTLLAVFGQNGMDSEV---SGVFKEMKRAGFVP 487
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+ + NT +S + G A ++ +AGV P TYN+++++ + G + ++ ++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM + C + TY ++ L ++ + + V+ TL+ K
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
+ E + F ++K G +PD+ T N+++ ++ + ++ A L M + G TP+ T
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 761 TTLDYL 766
+L Y+
Sbjct: 668 NSLMYM 673
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 175/461 (37%), Gaps = 68/461 (14%)
Query: 304 DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF 363
D+ +I K ++ A +FN + +GF Y SL+ + + EA +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 364 EKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT-LFCDLKKKGQFVDGITYSIIVLQXXX 422
+KM ++G K + TYN++++ K G P T L +K G D TY+ ++
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 423 XXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLR 482
GF D VT +L+ K R +++ + P ++
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 483 WKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWS 542
+ + + A + G E M
Sbjct: 352 YNSLISA---------------YARDGMLDEAM--------------------------- 369
Query: 543 LSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLAC 602
+L NQ+ G +FT T T LS F GK+ A
Sbjct: 370 ------ELKNQMAEKGTKPDVFTYT-------------------TLLSGFERAGKVESAM 404
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+FE AG P T+N+ + + +G F E I E+ DI T+N ++
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
G+ G S + + + G + +NTLI+A + G ++ + +M +G+ PD+
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TYNT++ ++ G+ + + K L M D C PN +T +L
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ +S + G L A +L E G P +TY +++S F + G A +I EM
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
C +I T+N I+ G G+ I D + G DIV +NTL+ G+ G E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
V+ F++MK +G P+ T+NTLI +S+ G + A + MLDAG TP+ T +T L
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 765 YLGREIDKLRYQKASILNEKDD 786
L R + Q +L E +D
Sbjct: 533 ALAR--GGMWEQSEKVLAEMED 552
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 572 VQQKGSDS-FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
++QK S D +V +S+ +G++S A +F E G Y+Y S++S+F
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA-DLASAILDRLLKQGGYLDIVM 689
G + EA + +M E C + TYN+I+ GK+G + +++++++ G D
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YNTLI + E + FE+MK++G + D VTYN L++V+ K+ K+A K L M+
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 750 DAGCTPNHVTDTTL 763
G +P+ VT +L
Sbjct: 342 LNGFSPSIVTYNSL 355
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 133/324 (41%), Gaps = 33/324 (10%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIAS 162
+K+ V ++FN L+ + +F + + + R +L G TP + YN++L A
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVY-----RRMLDAGVTPDLSTYNTVLAAL 534
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAF---------------- 206
R + + ++ E + L + +N I
Sbjct: 535 ARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 207 ----NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
L++ K D+ E ++ F +L ++ GF+ D N + +G +A + +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 263 HQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
M P + TYN L+ + + + + ++ A +PD +Y T+I C+
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
++ A+RIF++M N+G P I YN+ + + EA + M + G + + TY
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 379 NILIHGLIKNGRPEAAYTLFCDLK 402
N ++ G K R + A DL+
Sbjct: 773 NSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGY---LDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
++GLG + DLA D +KQ Y LD + +I+ LGK GR+ F ++
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
G + DV +Y +LI + +G ++A K M + GC P +T + L+ G+
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 255
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 227/516 (43%), Gaps = 41/516 (7%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TY+ LI+ C+ ++ AL V + ++P+ T ++L+ G C + +I A + +QM
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
G++P T+ +N+L+ LF K SEA L ++M +G + TY ++++GL K G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 392 EAAYTLFCDLKKKGQFVDGI-TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
+ A+ L + ++G+ G+ Y+ I+ +G ++VT +S
Sbjct: 238 DLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 451 LMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFPSK 508
L+ + +GRW RL+ + E + P V + A ++A +K +K Y M
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 509 GDFSEIMSILTGSQDAN-LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
D SI+T S N HD E ++ E+ +S H P
Sbjct: 357 ID----PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC-----------------FP- 394
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
D+ NT + F ++ ++F ++ G+ + TYN ++
Sbjct: 395 -------------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
+ G + A I EM P +I TYN ++ GL K G+ + A + + L + I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
YN +I + KAG++++ F + G+ PDVV YNT+I + G ++A K
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 748 MLDAGCTPNHVTDTTLDYLGREIDKLRYQKASILNE 783
M + G PN TL R D R A ++ E
Sbjct: 562 MKEDGTLPNSGCYNTL-IRARLRDGDREASAELIKE 596
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 222/523 (42%), Gaps = 56/523 (10%)
Query: 255 LATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L + +LF +M P P + ++ L+S + K+ K + + E + +H+TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI C+ ++ A + +M G+ P + +SLL+ + ++SEA L ++M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
+ + T+N LIHGL + + A L + KG D +TY ++V
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV------------- 228
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
G+ K G D L+ + +G L P VL + ++
Sbjct: 229 ----------------------NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 491 IKNPPS-------KKKDYSPMFPSKGDFSEIMSILTGS---QDANLDSHDTKIEDEEGDE 540
K K+ + + P+ +S ++S L DA+ D D
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 541 WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL 600
++ S +D + K A +L+ + + I ++ ++ F +L
Sbjct: 327 FTFSALIDAFVKEGKLV-EAEKLYDEMVKRSIDPS------IVTYSSLINGFCMHDRLDE 379
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++FE P TYN+++ F K E + EM ++ + TYN++IQ
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL + G D+A I ++ G +I+ YNTL++ L K G++++ FE ++ S + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ TYN +IE KAG ++D + + G P+ V T+
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 31/388 (7%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN L+H L + + E + ++D ++ GC P + Y ++ + LAF+
Sbjct: 188 TFNTLIHGLFLHNKASEAMALID-----RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 174 IFLKL--------IELFXXXXXXXXXXAALDSNSN-----------SNSIAFNQLLVALR 214
+ K+ + ++ +D N N + ++ L+ L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDL 270
+ ++ ++++K D + ++ I AF G L + L+ +M P +
Sbjct: 303 NYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
TY+ LI+ C ++ +A ++E + + PD TY TLI+G CK +++ +F +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M G T+ YN L+ LF+A A ++F++M +GV + TYN L+ GL KNG+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 391 PEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
E A +F L++ TY+I++ +G D+V +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 451 LMVGIHKHGRWDWTDRLMKHVREGDLVP 478
++ G + G + D L K ++E +P
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 118/542 (21%), Positives = 220/542 (40%), Gaps = 65/542 (11%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIEL---------------FXXXXXXXXXXAALD--- 196
Y+ L+ R + +PLA ++ K+++L + A +D
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 197 -SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL 255
+ N++ FN L+ L + E + +++ KG D Y + ++ GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 256 ATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
+F+L ++M P + YN +I LCK + DAL +++++ +P+ TY++L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
I C + A+R+ + M P +++L+D K K+ EA +L+++M + +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
S TY+ LI+G + R + A +F + K F D +TY+ ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
RG V + VT L+ G+ + G D + K + + P ++ + ++
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLD----SHDTKIEDEEGDEWSLSPHM 547
KN G + M + Q + ++ +++ IE M
Sbjct: 478 KN---------------GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG-----------M 511
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
K A +V+ LF + V+ D+ NT +S F KG A LF+
Sbjct: 512 CK-AGKVED---GWDLFCNLSLKGVKP------DVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
E G P S YN+++ + ++ G + +I EM D +T ++ L GR
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GR 620
Query: 668 AD 669
D
Sbjct: 621 LD 622
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 29/286 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+++ L++ + E Q+ +++ +H C P + YN+L+ + +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKH-----CFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ + N++ +N L+ L +A Q++F K M
Sbjct: 418 VFREMSQ----------------RGLVGNTVTYNILIQGLFQAGDCDMAQEIF-KEMVSD 460
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
G + YN + G L + +F + P + TYN +I +CK GKV+D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
++ +L+ +PD Y T+I G C+ + A +F +M +G P + YN+L+
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+ + +L ++M G T L+ ++ +GR + ++
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
L++ KL A LF ++ P ++ ++S+ K F+ ++ +M P +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
TY+++I + + LA A+L +++K G +IV ++L+N + RI E +Q
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 713 MKSSGINPDVVTYNTLIE---VHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
M +G P+ VT+NTLI +H+KA +A + M+ GC P+ VT
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKA---SEAMALIDRMVAKGCQPDLVT 223
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 222/498 (44%), Gaps = 38/498 (7%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
DL +YN LI+ C+ ++ AL V + ++PD T ++L+ G C +I A +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM ++P T+ +N+L+ LF K SEA L ++M G + TY +++GL K
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G + A +L ++K D + Y+ I+ +G ++VT
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFP 506
SL+ + +GRW RL+ + E + P V+ + A ++A +K +K Y M
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
S D ++ ++ + I + + + +D+ A +F
Sbjct: 354 R-------------SIDPDIFTYSSLI-----NGFCMHDRLDE----------AKHMFEL 385
Query: 567 TPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
+ D F ++ NT + F ++ +LF ++ G+ + TYN+++
Sbjct: 386 MISK-------DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
+ G + A I +M P DI TY++++ GL K G+ + A + + L K
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
DI YN +I + KAG++++ F + G+ P+V+ Y T+I + GL ++A
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 746 KMMLDAGCTPNHVTDTTL 763
+ M + G PN T TL
Sbjct: 559 REMKEDGTLPNSGTYNTL 576
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 123/567 (21%), Positives = 216/567 (38%), Gaps = 72/567 (12%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFG------------- 250
+ FN+LL A+ K + K + + M + D + YNI I+ F
Sbjct: 81 VEFNKLLSAIAKMN-KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 251 ---------------------CWGD-LATSFSLFHQM----PGPDLCTYNCLISVLCKLG 284
C G ++ + +L QM P+ T+N LI L
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
K +A+ + + + A QPD FTY T++ G CK ID A + +M ++Y
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+++D L V++A LF +M +G++ + TYN LI L GR A L D+ ++
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 405 GQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWT 464
+ +T+S ++ R D+ T +SL+ G H R D
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 465 DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
+ + + D P V+ + ++ K + ++ +F +
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCK--AKRVEEGMELFREMSQRGLV---------G 428
Query: 525 NLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDM 584
N +++T I+ Q A ++F V DI
Sbjct: 429 NTVTYNTLIQG---------------LFQAGDCDMAQKIFKKMVSDGVPP------DIIT 467
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+ L GKL A +FE ++ ++P YTYN ++ K G + W + +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K ++ Y +I G + G + A A+ + + G + YNTLI A + G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEV 731
+ ++M+S G D T + +I +
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINM 614
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN L+H L + + E + ++D + R GC P Y +++ + I LA S
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVAR-----GCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ LK +E +D+ N ++ N L +F + MD K
Sbjct: 242 L-LKKMEKGKIEADVVIYTTIIDALCNYKNV--NDAL-------------NLFTE-MDNK 284
Query: 234 GFALDTWGYNI---CIHAFGCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G + YN C+ +G W D + S + + P++ T++ LI K GK+ +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+++++ + PD FTY++LI G C ++D A +F M + P + YN+L+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
KA +V E +LF +M+Q G+ + TYN LI GL + G + A +F + G D
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 410 GITYSIIV 417
ITYSI++
Sbjct: 465 IITYSILL 472
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + +N L+ KA E ++F + M ++G +T YN I GD + +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFRE-MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M PD+ TY+ L+ LCK GK++ AL+V+E L +PD +TY +I+G CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ +F + G +P I+Y +++ + EA LF +M ++G + T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
YN LI +++G A+ L +++ G D T S+++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 184/444 (41%), Gaps = 32/444 (7%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+D A +F +M + P + +N LL + K K L E+M + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
ILI+ + + A + + K G D +T S ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
+ + VT +L+ G+ H + L+ + P + + ++ N K+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY-----GTVVNGLCKR- 233
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
GD +S+L + + E D + +D L N K+
Sbjct: 234 ---------GDIDLALSLLKKMEKGKI----------EADVVIYTTIIDALCNY-KNVND 273
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
A LFT + ++ ++ N+ + G+ S A +L E ++P T
Sbjct: 274 ALNLFTEMDNKGIRP------NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+++++ +FVK+G EA + EM ++ DI TY+ +I G R D A + + ++
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ + ++V YNTLI KA R++E + F +M G+ + VTYNTLI+ +AG
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
A K K M+ G P+ +T + L
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSIL 471
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 5/222 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + F+ L+ A K +E ++++ +++ K+ D + Y+ I+ F L +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+F M P++ TYN LI CK +V++ + ++ +++ + TY TLIQG
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
+ D A +IF +M ++G P I Y+ LLD L K K+ +A +FE + + ++
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
TYNI+I G+ K G+ E + LFC L KG + I Y+ ++
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++ +N L+ L +A Q++F K++ G D Y+I + +G L + +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F + PD+ TYN +I +CK GKV+D ++ L+ +P+ YTT+I G C+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A +F +M +G P + YN+L+ + + + +L ++M G T
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 378 YNILIHGLIKNGRPEAAY 395
+++I+ ++ +GR E +Y
Sbjct: 608 ISMVIN-MLHDGRLEKSY 624
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/611 (22%), Positives = 254/611 (41%), Gaps = 51/611 (8%)
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQ-QVFHKLMDK---KGFALDTWGYNICIHAFGCWG 253
+SNS ++ + ++ + + E Q V KL+DK + + LD Y +HA+ G
Sbjct: 165 SSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 224
Query: 254 DLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKV-KDALIVWEDLNACAHQPDHFTY 308
+ LF +M P P L TYN ++ V K+G+ + L V +++ + + D FT
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+T++ C + + A F ++ + G+ PGT+ YN+LL V KA +EA + ++M +
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
A TYN L+ ++ G + A + + KKG + ITY+ ++
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA--- 485
G V + T +++ + K R + +++ ++ P W
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 486 -----GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE 540
GM+ + N ++ P + F+ ++S G + +D+ E
Sbjct: 465 LCGNKGMDKFV-NRVFREMKSCGFEPDRDTFNTLISAY-GRCGSEVDASKMYGEMTRAGF 522
Query: 541 WSLSPHMDKLANQVKSSG-----------YASQLFTPTPGQ-----RVQQKGSDSFDIDM 584
+ + L N + G S+ F PT + KG + I+
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 585 VNTFL-------------SIFLAKGK---LSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
+ + ++ LA K L+ + + F +F + G P +NS++S F
Sbjct: 583 IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 642
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
+ +++A I+ + E D+ TYN ++ + G A IL L K D+V
Sbjct: 643 RNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 702
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
YNT+I + G + E + +M GI P + TYNT + ++ G+ + ++ M
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 749 LDAGCTPNHVT 759
C PN +T
Sbjct: 763 AKNDCRPNELT 773
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 220/543 (40%), Gaps = 41/543 (7%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG- 267
+L A + + E ++ F +L G+ T YN + FG G + S+ +M
Sbjct: 287 VLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 268 ---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHA 324
D TYN L++ + G K+A V E + P+ TYTT+I K K D A
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 325 TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG 384
++F M G P T YN++L +L K ++ +E ++ M G + T+N ++
Sbjct: 406 LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL 465
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD 444
G + +F ++K G D T++ ++ GF
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 445 LVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPM 504
+ T +L+ + + G W + ++ ++ P + YS M
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPT------------------ETSYSLM 567
Query: 505 FPSKGDFSEIMSILTGSQDANLDSHDTKI-EDEEGDEWSLSPHMDKLAN-QVKSSGYASQ 562
+ G ++ + +I E + W L + LAN + ++ + +
Sbjct: 568 ---------LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL-LLANFKCRALAGSER 617
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
FT + +K D+ + N+ LSIF A + E E G+ P TYNS
Sbjct: 618 AFT------LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+M +V++G +A I+ + + D+ +YN +I+G + G A +L + ++G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
I YNT ++ G E+ E M + P+ +T+ +++ + +AG +A
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 743 KFL 745
F+
Sbjct: 792 DFV 794
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 196/481 (40%), Gaps = 57/481 (11%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
++S+ +N+L+ A +A E V ++M KKG + Y I A+G G +
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVI-EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
LF+ M P+ CTYN ++S+L K + + + + D+ + P+ T+ T++ C
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
R+F +M + GF P +N+L+ + +A +++ +M + G A
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
TYN L++ L + G + + D+K KG +YS+
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL--------------------- 566
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP- 495
++ K G + +R+ ++EG + P + + + A+ K
Sbjct: 567 --------------MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 496 ---------SKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
KK Y P F+ ++SI T ++ D + +E D LSP
Sbjct: 613 AGSERAFTLFKKHGYKPDMVI---FNSMLSIFT--RNNMYDQAEGILESIRED--GLSPD 665
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE 606
+ + + + + + +K D+ NT + F +G + A ++
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
TE G+ P +TYN+ +S + G F E +I M + C + T+ M++ G + G
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 667 R 667
+
Sbjct: 786 K 786
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
FD +T LS +G L A + F G +P + TYN+++ F K G + EA ++
Sbjct: 279 FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ EM E CPAD TYN ++ + G + A+ +++ + K+G + + Y T+I+A GK
Sbjct: 339 LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
AG+ DE K F MK +G P+ TYN ++ + K + K L M GC+PN T
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Query: 760 DTTL 763
T+
Sbjct: 459 WNTM 462
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 175/445 (39%), Gaps = 41/445 (9%)
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+ +L + ++ S A +L +K+ + + Y ++H + G+ E A LF +K+ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 406 QFVDGITYSIIV-LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWT 464
+TY++I+ + +G D T ++++ + G
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 465 DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
++ P + + A ++ +F G ++E +S+L
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQ---------------VFGKAGVYTEALSVLK----- 340
Query: 525 NLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDM 584
E EE + S ++L +G++ + + + +KG I
Sbjct: 341 ---------EMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI--EMMTKKGVMPNAI-T 388
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
T + + GK A KLF EAG P + TYN+++S KK NE ++ +M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
C + AT+N ++ G G + + + G D +NTLI+A G+ G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL- 763
+ +K + +M +G N V TYN L+ ++ G + + M G P + + +
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 764 -------DYLGREIDKLRYQKASIL 781
+YLG E + R ++ I
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIF 593
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PDL TYN L+ + + G+ A + + L +PD +Y T+I+G C+ + A R+
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++M G RP YN+ + +E + E MA+ + + T+ +++ G +
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 388 NGRPEAAYTLFCDLK 402
G+ A +K
Sbjct: 784 AGKYSEAMDFVSKIK 798
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/482 (17%), Positives = 178/482 (36%), Gaps = 69/482 (14%)
Query: 72 HHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFH 131
+S P Y+ ++ + R F + + V+ + ++ ++ + +
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 132 ETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXX 191
E L++ +++ + CT SLL R+N + +K++
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM-------IKML------------ 444
Query: 192 XAALDSNSNS-NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFG 250
+ SN S N +N +L M +VF + M GF D +N I A+G
Sbjct: 445 -CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE-MKSCGFEPDRDTFNTLISAYG 502
Query: 251 CWGDLATSFSLFHQM--PGPDLC--TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHF 306
G + ++ +M G + C TYN L++ L + G + V D+ + +P
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 307 TYTTLIQGCCK------TYKIDH-----------------------------ATRIFNQM 331
+Y+ ++Q K +I++ + R F
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 622
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+G++P +++NS+L + + +A + E + ++G+ TYN L+ ++ G
Sbjct: 623 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
A + L+K D ++Y+ ++ RG + T +
Sbjct: 683 WKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWK--------AGMEASIKNPPSKKKDYSP 503
+ G G + + +++ + + D P L +K AG + + SK K + P
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Query: 504 MF 505
F
Sbjct: 803 CF 804
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 247/567 (43%), Gaps = 86/567 (15%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
I F++L A+ K + + K M+ KG A + + +I I+ F L +FS
Sbjct: 89 IDFSRLFSAIAKTK-QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
++ P+ T++ LI+ LC G+V +AL + + + H+PD T TL+ G C +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K A + ++M G +P + Y +L+V+ K+ + + A +L KM + +K Y+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+I GL K+G + A+ LF +++ KG + ITY+I
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI------------------------ 303
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
L+ G GRWD +L++ + + + P V+ + +++ +K ++
Sbjct: 304 -----------LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 500 D-------YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLAN 552
+ + + P ++ ++ D + H+DK AN
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLI-----------------------DGFCKENHLDK-AN 388
Query: 553 QVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAG 612
Q+ + KG D +I N ++ + ++ +LF + G
Sbjct: 389 QMV--------------DLMVSKGCDP-NIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
V + TYN+++ F + G N A + EM + P +I TY +++ GL G ++ A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
I +++ K LDI +YN +I+ + A ++D+ F + G+ P V TYN +I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVT 759
K G L +A + M + G P+ T
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWT 580
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + F+ L+ + K + KL + HK M +G A DT Y I F L +
Sbjct: 330 NPNVVTFSVLIDSFVK-EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+ M P++ T+N LI+ CK ++ D L ++ ++ D TY TLIQG
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C+ K++ A +F +M + P + Y LLD L + +A ++FEK+ + ++
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
YNI+IHG+ + + A+ LFC L KG TY+I++
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 191/483 (39%), Gaps = 79/483 (16%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++ + +L + K+ ++ K M+++ LD Y+I I G L +F+L
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F++M ++ TYN LI C G+ D + D+ P+ T++ LI K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+ A + +M + G P TI Y SL+D K + +A Q+ + M +G + +T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+NILI+G K R + LF + +G D +TY+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN----------------------- 442
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
+L+ G + G+ + L + + + P ++ +K ++ N S+
Sbjct: 443 ------------TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 498 K--KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK 555
K + + + SK M + G N+ H + D W
Sbjct: 491 KALEIFEKIEKSK------MELDIGIY--NIIIHGMCNASKVDDAW-------------- 528
Query: 556 SSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
LF P + V+ G +++I + KG LS A LF E G P
Sbjct: 529 ------DLFCSLPLKGVKP-GVKTYNI-----MIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
+TYN ++ + + G ++ +I E+ D +T M+I L GR L + L
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GR--LKKSFL 633
Query: 676 DRL 678
D L
Sbjct: 634 DML 636
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +NT ++ GK + A L + E G P + TY +++ K G A ++
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M E+ D Y++II GL K G D A + + + +G +I+ YN LI A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
GR D+ K M INP+VVT++ LI+ K G L++A + K M+ G P+ +T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 761 TTL 763
T+L
Sbjct: 372 TSL 374
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+T ++ +G++S A +L + E G P T N++++ G EA +I +M E
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
C + TY ++ + K G+ LA +L ++ ++ LD V Y+ +I+ L K G +D
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ GI +++TYN LI AG D K L+ M+ PN VT + L
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G L A LF G+ TYN ++ F G +++ ++ +M ++ ++ T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+++I K G+ A + ++ +G D + Y +LI+ K +D+ N+ + M S
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRY 775
G +P++ T+N LI + KA + D + + M G + VT TL E+ KL
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 776 QK 777
K
Sbjct: 457 AK 458
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P ++ + S+ K ++ A+ +M K ++ T +++I + + LA +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ +++K G + + ++TLIN L GR+ E + ++M G PD++T NTL+
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
+G +A + M++ GC PN VT
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVT 230
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 572 VQQKGSDSFDI--DMVNT--------FLSIFLAKGK-----LSLA-CKLFEIFTEAGVDP 615
V K D+ D+ DM+++ F +F A K L LA CK E+ G+
Sbjct: 65 VDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL---KGIAH 121
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
YT + +++ F + A++ + ++ + + T++ +I GL GR A ++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
DR+++ G D++ NTL+N L +G+ E ++M G P+ VTY ++ V K+
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 736 GLLKDAYKFLKMM 748
G A + L+ M
Sbjct: 242 GQTALAMELLRKM 254
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 231/539 (42%), Gaps = 49/539 (9%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
I FN+L A+ K + E K M+ KG A + +I I+ F L+ +FS
Sbjct: 89 IDFNRLFSAIAKTK-QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
++ PD +N L++ LC +V +AL + + + H+P T TL+ G C
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+ A + ++M GF+P + Y +L+V+ K+ + + A +L KM + +K Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+I GL K+G + A+ LF +++ KG D ITY+ ++ R
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK-NPPSKK 498
++VT + L+ K G+ D+L+K + + + P + + + ++ K N +
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 499 KDYSPMFPSKGDFSEIMS---ILTGSQDANLDSHDTKIED--EEGDEWSLSPHMDKLANQ 553
+ SKG +IM+ ++ G AN +I+D E E SL +AN
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKAN------RIDDGLELFREMSLRGV---IANT 438
Query: 554 VKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGV 613
V NT + F GKL +A KLF+ V
Sbjct: 439 VT-----------------------------YNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
P +Y ++ G +A I ++ + DI Y +II G+ + D A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+ L +G LD YN +I+ L + + + + F +M G PD +TYN LI H
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/544 (20%), Positives = 216/544 (39%), Gaps = 77/544 (14%)
Query: 258 SFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+ LF M P P + +N L S + K + + L + + + + +T + +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
C+ K+ +A ++ G+ P T+++N+LL+ L +VSEA +L ++M + G K
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 374 SCQTYNILIHGLIKNGRPEAAYTL----------------------FC------------ 399
+ T N L++GL NG+ A L C
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 400 -DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
++++ +D + YSII+ +GF D++T +L+ G
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
GRWD +L++ + + + P V+ + +++ +K ++ D E+M
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL--------LKEMM--- 360
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ---QK 575
+ ++P+ + + G+ + Q V K
Sbjct: 361 ---------------------QRGIAPNTITYNSLI--DGFCKENRLEEAIQMVDLMISK 397
Query: 576 GSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
G D DI N ++ + ++ +LF + GV + TYN+++ F + G
Sbjct: 398 GCDP-DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
A + EM + DI +Y +++ GL G + A I ++ K LDI +Y +I+
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
+ A ++D+ F + G+ D YN +I + L A + M + G P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 756 NHVT 759
+ +T
Sbjct: 577 DELT 580
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + F+ L+ + K E Q+ ++M ++G A +T YN I F L + +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
M PD+ T+N LI+ CK ++ D L ++ +++ + TY TL+QG C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ K++ A ++F +M + RP + Y LLD L ++ +A ++F K+ + ++
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y I+IHG+ + + A+ LFC L KG +D Y+I++
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 183/443 (41%), Gaps = 38/443 (8%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K D A +F M + P I +N L + K + L ++M +G+ S T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+I+ + + A++ + K G D + ++ ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G L+T+ +L+ G+ +G+ L+ + E P + + + K+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS------ 241
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTK---IEDEEGDEWSLSPHMDKLANQVKS 556
G + M +L ++ N+ K I D + SL + L N+++
Sbjct: 242 ---------GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN-LFNEMEI 291
Query: 557 SGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
G+ + + T NT + F G+ KL + + P
Sbjct: 292 KGFKADIIT-------------------YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
T++ ++ SFVK+G EA ++ EM ++ + TYN +I G K R + A ++D
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
++ +G DI+ +N LIN KA RID+ + F +M G+ + VTYNTL++ ++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 737 LLKDAYKFLKMMLDAGCTPNHVT 759
L+ A K + M+ P+ V+
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVS 475
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+NT ++ GK+S A L + E G P TY +++ K G A ++ +M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
E+ D Y++II GL K G D A + + + +G DI+ YNTLI AGR D
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ K M I+P+VVT++ LI+ K G L++A + LK M+ G PN +T +L
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D + NT L+ + ++S A +L + E G P T N++++ G ++A +I
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M E + TY ++ + K G+ LA +L ++ ++ LD V Y+ +I+ L K
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G +D F +M+ G D++TYNTLI AG D K L+ M+ +PN VT
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 761 TTL 763
+ L
Sbjct: 337 SVL 339
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G L A LF G TYN+++ F G +++ ++ +M ++ ++ T+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+++I K G+ A +L ++++G + + YN+LI+ K R++E + + M S
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G +PD++T+N LI + KA + D + + M G N VT TL
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 152/617 (24%), Positives = 251/617 (40%), Gaps = 101/617 (16%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMD-----KKGFALDTWGYNICIHAFGCWGDLATSFS 260
+N L+ A KAD +L+ + H+ M GF L + Y++C G W + T
Sbjct: 238 YNCLIQAFLKAD-RLDSASLIHREMSLANLRMDGFTLRCFAYSLC--KVGKWREALTLVE 294
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+ +P D Y LIS LC+ ++A+ + A + P+ TY+TL+ GC +
Sbjct: 295 TENFVP--DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 352
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ R+ N M G P ++NSL+ + S A +L +KM + G YNI
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 381 LI---------------------------HGLIKN--------------GRPEAAYTLFC 399
LI G++ N G+ E A+++
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 400 DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG 459
++ +G D TYS ++ G V D+ T T ++ K G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 460 RWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYS-PMFPSKGDFSEIMSIL 518
+ + +RE P V+ + A + A +K +KK Y+ +F + + +I+
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLK---AKKVSYANELFETMLSEGCLPNIV 589
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
T S A +D H A QV+ A Q+F G + D
Sbjct: 590 TYS--ALIDGHCK-------------------AGQVEK---ACQIFERMCGSK------D 619
Query: 579 SFDIDMV----------------NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
D+DM L F ++ A KL + + G +P Y++
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ K G +EA + TEM E PA + TY+ +I K+ R DLAS +L ++L+
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
++V+Y +I+ L K G+ DE K + M+ G P+VVTY +I+ G ++
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 743 KFLKMMLDAGCTPNHVT 759
+ L+ M G PN+VT
Sbjct: 800 ELLERMGSKGVAPNYVT 816
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 208/517 (40%), Gaps = 54/517 (10%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDAL------- 290
+N +HA+ GD + ++ L +M P YN LI +C KD+L
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG---DKDSLNCDLLDL 431
Query: 291 --IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
+ ++ A + ++ + C K + A + +M GF P T Y+ +L+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
L A+K+ A LFE+M + G+ A TY I++ K G E A F ++++ G
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 409 DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM 468
+ +TY+ ++ G + ++VT ++L+ G K G+ + ++
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 469 KHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ--DANL 526
+ + VP V + F D SE +++T D
Sbjct: 612 ERMCGSKDVPDVDMY---------------------FKQYDDNSERPNVVTYGALLDGFC 650
Query: 527 DSHDTKIEDEEGDEWSLS---PHM---DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF 580
SH + + D S+ P+ D L + + G + Q V+ + S+
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE------AQEVKTEMSEHG 704
Query: 581 DIDMVNTFLSI---FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
+ T+ S+ + + LA K+ E P Y ++ K G +EA+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
++ M EK C ++ TY +I G G IG+ + +L+R+ +G + V Y LI+
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
K G +D + E+MK + Y +IE +K
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 133/645 (20%), Positives = 258/645 (40%), Gaps = 82/645 (12%)
Query: 114 PQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLA 171
P+ FN L+H+ S + ++L + +++ G P ++YN +LI S+ +
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLL-----KKMVKCGHMPGYVVYN-ILIGSICGDKD--- 422
Query: 172 FSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFH--KL 229
S+ L++L + + N +S F + L + K +++ F +
Sbjct: 423 -SLNCDLLDLAEKAYSEMLAAGVVLNKINVSS--FTRCLCSAGK------YEKAFSVIRE 473
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M +GF DT Y+ ++ + +F LF +M D+ TY ++ CK G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
++ A + ++ P+ TYT LI K K+ +A +F M + G P + Y++
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 346 LLDVLFKATKVSEACQLFEKMA----------------QEGVKASCQTYNILIHGLIKNG 389
L+D KA +V +ACQ+FE+M + + TY L+ G K+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTIT 449
R E A L + +G + I Y ++ GF L T +
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 450 SLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKG 509
SL+ K R D +++ + E P V+ + ++ K G
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK---------------VG 758
Query: 510 DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPG 569
E ++ ++ +E+G P++ + G ++ T
Sbjct: 759 KTDEAYKLM-------------QMMEEKG----CQPNVVTYTAMIDGFGMIGKI--ETCL 799
Query: 570 QRVQQKGSDSFDIDMVNTFLSI--FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
+ +++ GS + V + I G L +A L E + + Y ++ F
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K+ F E+ ++ E+G+ ++ Y ++I L K R ++A +L+ + L
Sbjct: 860 NKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 688 V--MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
YN+LI +L A +++ + F +M G+ P++ ++ +LI+
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 189/490 (38%), Gaps = 39/490 (7%)
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
L++ C+ A ++ + FRP YN L+ KA ++ A + +M+
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV-DGITYSIIVLQXXXXXXXXX 428
++ T + L K G+ A TL + FV D + Y+ ++
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV----ETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK-------VL 481
+ ++VT ++L+ G + R++ + P V
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 482 RWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEW 541
+ + S KK P + +IL GS + DS + + D +
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPG----YVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPGQR----VQQKGSDSF--DIDMVNTFLSIFLAK 595
S + N++ S + L + ++ +++ F D + L+
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
K+ LA LFE G+ YTY ++ SF K G +A EM E C ++ TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+I K + A+ + + +L +G +IV Y+ LI+ KAG++++ + FE+M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 716 SGINPD----------------VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
S PD VVTY L++ K+ +++A K L M GC PN +
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 760 -DTTLDYLGR 768
D +D L +
Sbjct: 677 YDALIDGLCK 686
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV-KKGYFN-------- 634
+ N+ + + G S A KL + + G P YN ++ S K N
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
+A++ + G L +++++ + L G+ + A +++ ++ QG D Y+ ++
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
N L A +++ FE+MK G+ DV TY +++ KAGL++ A K+ M + GCT
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 755 PNHVTDTTLDYLGREIDKLRY 775
PN VT T L + + K+ Y
Sbjct: 551 PNVVTYTALIHAYLKAKKVSY 571
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 9/194 (4%)
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAK----GKLSLACKLFEIFTEAGVDPVSYTYNS 622
P + +QQ D D ++ FL++ + K G S+A + + P TYN
Sbjct: 183 VPEEFLQQIRDD--DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNC 240
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ +F+K + A I EM D T L K+G+ A +++ +
Sbjct: 241 LIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TEN 297
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D V Y LI+ L +A +E F +M+++ P+VVTY+TL+ L
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 743 KFLKMMLDAGCTPN 756
+ L MM+ GC P+
Sbjct: 358 RVLNMMMMEGCYPS 371
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
Q +++KG ++ + F GK+ +L E GV P TY ++ K
Sbjct: 768 QMMEEKGCQP-NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G + A ++ EM + P A Y +I+G K L +LD + + + +
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL--GLLDEIGQDDTAPFLSV 884
Query: 690 YNTLINALGKAGRIDEVNKFFEQMK--SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
Y LI+ L KA R++ + E++ S+ + TYN+LIE A ++ A++
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 748 MLDAGCTPN 756
M G P
Sbjct: 945 MTKKGVIPE 953
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 245/567 (43%), Gaps = 82/567 (14%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
FN+LL A+ K K + + M + G + + + YNI I+ F ++ + +L +M
Sbjct: 13 FNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P + T + L++ C ++ DA+ + + + ++PD T+TTLI G K
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A + ++M G +P + Y +++ L K + A L KM ++A +N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
I L K + A LF +++ KG + +TYS
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS--------------------------- 224
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
SL+ + +GRW +L+ + E + P ++ + A ++A +K
Sbjct: 225 --------SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK--------- 267
Query: 502 SPMFPSKGDFSEIMSI----LTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
+G F E + + S D ++ ++++ I + + + +DK
Sbjct: 268 ------EGKFVEAEKLHDDMIKRSIDPDIFTYNSLI-----NGFCMHDRLDK-------- 308
Query: 558 GYASQLFTPTPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
A Q+F + D F D+D NT + F ++ +LF + G+
Sbjct: 309 --AKQMFEFMVSK-------DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
+ TY +++ G + A + +M P DI TY++++ GL G+ + A + D
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ K LDI +Y T+I + KAG++D+ F + G+ P+VVTYNT+I
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
LL++AY LK M + G P+ T TL
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 216/508 (42%), Gaps = 77/508 (15%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+L TYN LI+ C+ ++ AL + + ++P T ++L+ G C +I A +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM G+RP TI + +L+ LF K SEA L ++M Q G + + TY ++++GL K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G + A+ L ++ D + ++ I+ +G ++VT
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSK 508
+SL+ + +GRW +L+ + E + P ++ + A ++A +K +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------------E 268
Query: 509 GDFSEIMSI----LTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
G F E + + S D ++ ++++ I + + + +DK A Q+F
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLI-----NGFCMHDRLDK----------AKQMF 313
Query: 565 TPTPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
+ D F D+D NT + F ++ +LF + G+ + TY ++
Sbjct: 314 EFMVSK-------DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 624 MSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGG 683
+ G + A + +M P DI TY++++ GL G+ + A + D + K
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 684 YLDIVMYNTLINALGKAGRID-----------------------------------EVNK 708
LDI +Y T+I + KAG++D E
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAG 736
++MK G PD TYNTLI H + G
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 176/426 (41%), Gaps = 32/426 (7%)
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
P +N LL + K K L EKM + G+ + TYNILI+ + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 398 FCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHK 457
+ K G +T S ++ G+ D +T T+L+ G+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 458 HGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSI 517
H + L+ + + P ++ + + K +GD ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---------------RGDIDLAFNL 172
Query: 518 LTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGS 577
L + A +++ D I + D H+D N K T G R
Sbjct: 173 LNKMEAAKIEA-DVVIFNTIIDSLCKYRHVDDALNLFKE--------METKGIRP----- 218
Query: 578 DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
++ ++ +S + G+ S A +L E ++P T+N+++ +FVK+G F EA
Sbjct: 219 ---NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
+ +M ++ DI TYN +I G R D A + + ++ + + D+ YNTLI
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
K+ R+++ + F +M G+ D VTY TLI+ G +A K K M+ G P+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 758 VTDTTL 763
+T + L
Sbjct: 396 MTYSIL 401
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + FN L+ A K +E +++ H M K+ D + YN I+ F L +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKL-HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+F M PDL TYN LI CK +V+D ++ +++ D TYTTLIQG
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
D+A ++F QM ++G P + Y+ LLD L K+ +A ++F+ M + +K
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y +I G+ K G+ + + LFC L KG + +TY+ ++
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+N L+ K+ + ++F + M +G DT Y I GD + +F Q
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFRE-MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M PD+ TY+ L+ LC GK++ AL V++ + + D + YTT+I+G CK K
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+D +F + G +P + YN+++ L + EA L +KM ++G TYN
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 381 LIHGLIKNGRPEAAYTLFCDLK 402
LI +++G A+ L +++
Sbjct: 506 LIRAHLRDGDKAASAELIREMR 527
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 215/497 (43%), Gaps = 23/497 (4%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
DL TY+ I+ C+ ++ AL V + ++PD T ++L+ G C + +I A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM G++P T + +L+ LF K SEA L ++M Q G + TY +++GL K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G + A +L ++K D + Y+ I+ +G D+ T
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFP 506
+SL+ + +GRW RL+ + E + P V+ + A ++A +K +K Y M
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 507 SKGDFSEIMSILTGSQDAN-LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
D I T S N HD DE + L D N V Y++ +
Sbjct: 357 RSID----PDIFTYSSLINGFCMHDRL--DEAKHMFELMISKDCFPNVVT---YSTLIKG 407
Query: 566 PTPGQRVQQKGSDSF----------DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
+RV++ G + F + T + F A +F+ GV P
Sbjct: 408 FCKAKRVEE-GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
TYN ++ K G +A + + DI TYN++I+G+ K G+ + +
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
L +G +++ YNT+I+ + G +E + ++MK G P+ TYNTLI +
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 736 GLLKDAYKFLKMMLDAG 752
G + + + +K M G
Sbjct: 587 GDREASAELIKEMRSCG 603
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 216/526 (41%), Gaps = 58/526 (11%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A +GD+ S P P + +N L+S + K+ K + + + E + D +T
Sbjct: 67 AVDLFGDMVKS------RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y+ I C+ ++ A + +M G+ P + +SLL+ + ++S+A L ++M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G K T+ LIHGL + + A L VD +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVAL----------VDQMV--------------- 215
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
RG DLVT +++ G+ K G D L+K + +G + V+ + +
Sbjct: 216 ----------QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 488 EASIKNPPSK-------KKDYSPMFPSKGDFSEIMSILTGS---QDANLDSHDTKIEDEE 537
+ K + D + P +S ++S L DA+ D
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI----- 320
Query: 538 GDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGK 597
E ++P++ + + + +L K S DI ++ ++ F +
Sbjct: 321 --ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
L A +FE+ P TY++++ F K E + EM ++ + TY
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
+I G + D A + +++ G + +I+ YN L++ L K G++ + FE ++ S
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ PD+ TYN +IE KAG ++D ++ + G +PN + T+
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 182/440 (41%), Gaps = 32/440 (7%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+D A +F M + P + +N LL + K K L E+M G+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I I+ + + A + + K G D +T S ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G+ D T T+L+ G+ H + L+ + + P ++ + ++ N K+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY-----GTVVNGLCKR- 236
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
GD +S+L + +++ D I + D HMD N
Sbjct: 237 ---------GDIDLALSLLKKMEKGKIEA-DVVIYNTIIDGLCKYKHMDDALN------- 279
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
LFT + ++ D+ ++ +S G+ S A +L E ++P T
Sbjct: 280 ---LFTEMDNKGIRP------DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+++++ +FVK+G EA + EM ++ DI TY+ +I G R D A + + ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ + ++V Y+TLI KA R++E + F +M G+ + VTY TLI +A
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 740 DAYKFLKMMLDAGCTPNHVT 759
+A K M+ G PN +T
Sbjct: 451 NAQMVFKQMVSVGVHPNILT 470
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + ++ L+ KA E ++F + M ++G +T Y IH F D + +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFRE-MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F QM P++ TYN L+ LCK GK+ A++V+E L +PD +TY +I+G CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ +F + G P I YN+++ + EA L +KM ++G + T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
YN LI +++G EA+ L +++ G D T ++
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 141/651 (21%), Positives = 252/651 (38%), Gaps = 74/651 (11%)
Query: 49 LQILSNPTLHPSHKLHFFNWCRS---HHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSI 105
LQ + NP PS FFN C S S + Y ILR+ +
Sbjct: 18 LQGIGNPPTVPS----FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV---DL 70
Query: 106 KQDAVVLHP----QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIA 161
D V P FN LL ++ + F + + + +Q + T Y+ +
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT---YSIFINC 127
Query: 162 SLRNNHIPLAFSIFLKLIELFXX---XXXXXXXXAALDSNSNSNSIAFNQLLVALRKADM 218
R + + LA ++ K+++L S S+++A +V +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 219 KLEFQQVFHKL---------------MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
F + H L M ++G D Y ++ GD+ + SL
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M D+ YN +I LCK + DAL ++ +++ +PD FTY++LI C
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+ A+R+ + M P + +++L+D K K+ EA +L+++M + + TY+
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
LI+G + R + A +F + K F + +TYS ++ R
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G V + VT T+L+ G + D + K + + P +L + ++ KN
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN------ 481
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK-SSG 558
G ++ M + Q + + E D ++ + ++ + K G
Sbjct: 482 ---------GKLAKAMVVFEYLQRSTM----------EPDIYTYNIMIEGMCKAGKVEDG 522
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
+ +LF + V S ++ NT +S F KG A L + E G P S
Sbjct: 523 W--ELFCNLSLKGV------SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
TYN+++ + ++ G + +I EM D +T ++ L GR D
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLD 624
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++ + L+ +A Q VF K M G + YNI + G LA + +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVF-KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F + PD+ TYN +I +CK GKV+D ++ +L+ P+ Y T+I G C+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A + +M +G P + YN+L+ + + +L ++M G T
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Query: 378 YNILIHGLIKNGRPEAAY 395
L+ ++ +GR + ++
Sbjct: 611 IG-LVTNMLHDGRLDKSF 627
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
K+ A LF ++ P +N ++S+ K F ++ +M D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+ I + + LA A+L +++K G DIV ++L+N + RI + +QM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 717 GINPDVVTYNTLIE---VHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G PD T+ TLI +H+KA +A + M+ GC P+ VT T+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKA---SEAVALVDQMVQRGCQPDLVTYGTV 229
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 214/508 (42%), Gaps = 72/508 (14%)
Query: 246 IHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDL-NACA 300
+ A G ++ + S+F+Q G P TYN +I +L + G+ + V+ ++ N
Sbjct: 169 VKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD 228
Query: 301 HQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEAC 360
PD TY+ LI K + D A R+F++M +N +P +Y +LL + FK KV +A
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 361 QLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQX 420
LFE+M + G + TY LI GL K GR + AY + D+ + DG+T ++ L
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR-----DGLTPDVVFLNN 343
Query: 421 XXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
G V +L + S M G W T P V
Sbjct: 344 LMNILGKV-----------GRVEELTNVFSEM------GMWRCT-------------PTV 373
Query: 481 LRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD---------- 530
+ + ++A +F SK SE+ S + ++ +
Sbjct: 374 VSYNTVIKA--------------LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 531 ---TKIED-----EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI 582
++E EE DE P + + + G A + + ++ +
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
+ + F GKLS A LF G P Y YN++MS VK G NEA +++ +
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
M E C ADI ++N+I+ G + G A + + + G D V YNTL+ AG
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIE 730
+E + +MK G D +TY+++++
Sbjct: 600 FEEAARMMREMKDKGFEYDAITYSSILD 627
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 211/525 (40%), Gaps = 63/525 (12%)
Query: 151 TPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLL 210
+P + + L+ A R + A S+F + A S +N ++
Sbjct: 161 SPAVLSELVKALGRAKMVSKALSVFYQ----------------AKGRKCKPTSSTYNSVI 204
Query: 211 VALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG--- 267
+ L + + +V+ ++ ++ DT Y+ I ++ G ++ LF +M
Sbjct: 205 LMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCM 264
Query: 268 -PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
P Y L+ + K+GKV+ AL ++E++ P +TYT LI+G K ++D A
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYG 324
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+ M +G P + N+L+++L K +V E +F +M + +YN +I L
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 387 KN-GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDL 445
++ + F +K TYSI++ +GF
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 446 VTITSLMVGIHKHGRWDWTDRLMKHVRE--GDLVPKVLRWKAGMEASIKNPPSKKKDYSP 503
SL+ + K R++ + L K ++E G++ +V Y+
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV--------------------YAV 484
Query: 504 M---FPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
M F G SE + + ++ K + D ++ + M + +
Sbjct: 485 MIKHFGKCGKLSEAVDLF----------NEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
S L +++++ G + DI+ N L+ F G A ++FE +G+ P TY
Sbjct: 535 SLL------RKMEENGCRA-DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
N+++ F G F EA ++ EM +K D TY+ I+ +G +
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 205/550 (37%), Gaps = 114/550 (20%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
L+ L + V AL V+ +P TY ++I + + + ++ +M N G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 336 -FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
P TI Y++L+ K + A +LF++M ++ + + Y L+ K G+ E A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
LF ++K+ G TY+ ++ G D+V + +LM
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 455 IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ K GR + + + P V+ + ++A +F SK SE+
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA--------------LFESKAHVSEV 393
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
S W DK+ K+ + FT
Sbjct: 394 SS------------------------W-----FDKM----KADSVSPSEFT--------- 411
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+ + + ++ A L E E G P Y S++++ K +
Sbjct: 412 ----------YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
A + E+ E Y ++I+ GK G+ A + + + QG D+ YN L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 695 NALGKAGRIDEVN-----------------------------------KFFEQMKSSGIN 719
+ + KAG I+E N + FE +K SGI
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREIDKLRYQKA 778
PD VTYNTL+ + AG+ ++A + ++ M D G + +T + LD +G
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG----------- 630
Query: 779 SILNEKDDPS 788
++ +EKDD S
Sbjct: 631 NVDHEKDDVS 640
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 228/538 (42%), Gaps = 65/538 (12%)
Query: 249 FGCWGDLATS---FSLFHQMPG-----------PDLCTYNCLISVLCKLGKVKDALIVWE 294
GC+ L S F L +M P++ TYN +++ CKLG V++A
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
+ PD FTYT+LI G C+ +D A ++FN+M G R + Y L+ L A
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
++ EA LF KM + + +TY +LI L + R A L ++++ G + TY+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 415 IIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREG 474
+++ +G + +++T +L+ G K G + +++ +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 475 DLVPKVLRWKAGMEASIKNPPSKKKDY-SPMFPSK--GDFSEIMSILTGS-QDANLDS-- 528
L P + ++ K+ K + M K D S++ G + N DS
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 529 HDTKIEDEEG---DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV 585
+ ++ G D+W+ + +D L +RV++
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCK----------------SKRVEE----------- 515
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
AC LF+ + GV+P Y +++ + K G +EA ++ +M
Sbjct: 516 ---------------ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K C + T+N +I GL G+ A+ + ++++K G + LI+ L K G D
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F+QM SSG PD TY T I+ + + G L DA + M + G +P+ T ++L
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 229/553 (41%), Gaps = 59/553 (10%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N I +N L+ K M + V +LM+ + + +T YN I + C ++ + +
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGV 449
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
++M PD+ TYN LI C+ G A + +N PD +TYT++I CK
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ +++ A +F+ + G P ++Y +L+D KA KV EA + EKM + + T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N LIHGL +G+ + A L + K G T +I++ +
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
G D T T+ + + GR + +M +RE + P +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF---------------- 673
Query: 498 KKDYSPMFPSKGDFSEI---MSILTGSQDANLDSHDTK--------IEDEEGDEWSLSPH 546
YS + GD + +L +D + +E + G + P
Sbjct: 674 --TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 547 MDKLANQVKSSGYASQL-----FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
+ ++N ++ L + TP + +K L I G L +A
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK-----------LILGI-CEVGNLRVA 779
Query: 602 CKLFE-IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA---DIATYNM 657
K+F+ + G+ P +N+++S K NEA ++ +M +C + + +
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM---ICVGHLPQLESCKV 836
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
+I GL K G + +++ LL+ G Y D + + +I+ +GK G ++ + F M+ +G
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 718 INPDVVTYNTLIE 730
TY+ LIE
Sbjct: 897 CKFSSQTYSLLIE 909
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 200/445 (44%), Gaps = 41/445 (9%)
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN+LL+ L + V E Q++ +M ++ V + TYN +++G K G E A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
+ G D TY+ +++ +G + V T L+ G+ R D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ 522
L +++ + FP+ ++ ++ L GS+
Sbjct: 306 EAMDLFVKMKDDEC----------------------------FPTVRTYTVLIKSLCGSE 337
Query: 523 DANLDSHDTKIEDEEGDEWSLSPH---MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDS 579
+ + K +E G + ++ + +D L +Q K A +L GQ ++ KG
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK-ARELL----GQMLE-KGLMP 391
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
++ N ++ + +G + A + E+ + P + TYN ++ + K ++A +
Sbjct: 392 -NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGV 449
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ +M E+ D+ TYN +I G + G D A +L + +G D Y ++I++L K
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ R++E F+ ++ G+NP+VV Y LI+ + KAG + +A+ L+ ML C PN +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 760 DTTLDYLGREIDKLRYQKASILNEK 784
L + G D + ++A++L EK
Sbjct: 570 FNALIH-GLCADG-KLKEATLLEEK 592
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 130/580 (22%), Positives = 235/580 (40%), Gaps = 53/580 (9%)
Query: 214 RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PD 269
++ D+ F+ VF++ M KG + Y IH + + LF +M P
Sbjct: 265 QRKDLDSAFK-VFNE-MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 270 LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
+ TY LI LC + +AL + +++ +P+ TYT LI C K + A +
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 330 QMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
QM G P I YN+L++ K + +A + E M + + +TYN LI G K+
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTIT 449
+A L L++K D +TY+ ++ RG V D T T
Sbjct: 443 VHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 450 SLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPM----- 504
S++ + K R + L + + + P V+ + A ++ K + K D + +
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK---AGKVDEAHLMLEKM 558
Query: 505 -----FPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK---LANQVKS 556
P+ F+ ++ L D L + + +E+ + L P + L +++
Sbjct: 559 LSKNCLPNSLTFNALIHGLCA--DGKL--KEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 557 SGYASQLFTPTPGQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVD 614
G ++ R QQ S D TF+ + +G+L A + E GV
Sbjct: 615 DGDFDHAYS-----RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL--GKIGRA---- 668
P +TY+S++ + G N A+ ++ M + C T+ +I+ L K G+
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 669 ------------DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-KS 715
D +L+++++ + Y LI + + G + K F+ M ++
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
GI+P + +N L+ K +A K + M+ G P
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 126/318 (39%), Gaps = 30/318 (9%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSI 174
+++N L+ S N H+ + +L+ + +R +L T YNSL+ R+ + A+ +
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVT---YNSLIDGQCRSGNFDSAYRL 484
Query: 175 ---------------FLKLIELFXXXXXXXXXXAALDS----NSNSNSIAFNQLLVALRK 215
+ +I+ DS N N + + L+ K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLC 271
A E + K++ K ++ +N IH G L + L +M P +
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
T LI L K G A ++ + + +PD TYTT IQ C+ ++ A + +M
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI--KNG 389
NG P Y+SL+ + + A + ++M G + S T+ LI L+ K G
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 390 RPEAAYTLFCDLKKKGQF 407
+ + + C + +F
Sbjct: 724 KQKGSEPELCAMSNMMEF 741
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM-IIQGLGKIGRADLASAILD 676
Y+Y S+++ + GY + I M + A Y + + + + K R +L ++
Sbjct: 124 YSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLI- 182
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
I YNTL+N+L + G +DE+ + + +M + P++ TYN ++ + K G
Sbjct: 183 ----------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+++A +++ +++AG P+ T T+L
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSL 259
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 253 GDLATSFSLFHQMP-----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
G+L + +F M P +N L+S CKL K +A V +D+ H P +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
LI G K + + T +F + G+ + + ++D + K V +LF M
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 368 QEGVKASCQTYNILIHG 384
+ G K S QTY++LI G
Sbjct: 894 KNGCKFSSQTYSLLIEG 910
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 249/572 (43%), Gaps = 58/572 (10%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
++N +L L + VF+ ++ +K + + + + AF ++ ++ SL
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M P+ Y LI L K +V +AL + E++ PD T+ +I G CK +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I+ A ++ N+M GF P I Y L++ L K +V A LF ++ K +N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNT 358
Query: 381 LIHGLIKNGRPEAAYTLFCDL-KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
LIHG + +GR + A + D+ G D TY+ ++ +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNP--PSK 497
G ++ + T L+ G K G+ D ++ + L P + + + A K P
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 498 KKDYSPMFPSKG---DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQV 554
+ + M P KG D S+++G + + H W L +
Sbjct: 479 VEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKHAL---------W--------LLRDM 520
Query: 555 KSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE--IFTEAG 612
S G + T NT ++ FL +G++ A KL +F +
Sbjct: 521 ISEGVVANTVT-------------------YNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLA 671
+D + TYNS++ + G ++A ++ +M + P++I+ N++I GL + G + A
Sbjct: 562 LDEI--TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEA 618
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
++ +G DIV +N+LIN L +AGRI++ F ++++ GI PD VT+NTL+
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K G + DA L ++ G PNH T + L
Sbjct: 679 LCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 224/512 (43%), Gaps = 32/512 (6%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P +YN ++ +L K A V+ D+ + P FT+ +++ C +ID A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M +G P +++Y +L+ L K +V+EA QL E+M G +T+N +I GL K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
R A + + +G D ITY ++ R ++V
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLM----NGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 448 ITSLMVGIHKHGRWDWTDRLMKH-VREGDLVPKVLR--------WKAGMEA-------SI 491
+L+ G HGR D ++ V +VP V WK G+ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
+N K YS G F ++ I N S D + G +S +
Sbjct: 416 RNKGCKPNVYSYTILVDG-FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE-- 472
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
+++ A ++F P +KG D+ N+ +S ++ A L
Sbjct: 473 HRIPE---AVEIFREMP-----RKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
GV + TYN+++++F+++G EA ++ EM + P D TYN +I+GL + G D A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
++ +++L+ G + N LIN L ++G ++E +F ++M G PD+VT+N+LI
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+AG ++D + + G P+ VT TL
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 34/366 (9%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSI 174
+ L+HSL + +E LQ+L+ + GC P +N +++ + + I A +
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLE-----EMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 175 FLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKG 234
++ L + I + L+ L K + +F+++ +
Sbjct: 310 VNRM----------------LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 235 FALDTWGYNICIH-----AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
+T + H A D+ TS+ + PD+CTYN LI K G V A
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV-----PDVCTYNSLIYGYWKEGLVGLA 408
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L V D+ +P+ ++YT L+ G CK KID A + N+M +G +P T+ +N L+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K ++ EA ++F +M ++G K T+N LI GL + + A L D+ +G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM- 468
+TY+ ++ +G +D +T SL+ G+ + G D L
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 469 KHVREG 474
K +R+G
Sbjct: 589 KMLRDG 594
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 30/278 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIY--NSLLIASLRNNHIPLAFS 173
FN L+ + H E ++I R + + GC P +Y NSL+ + I A
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIF-----REMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVA-LRKADMKLEFQQVFHKLMDK 232
+ +I +N++ +N L+ A LR+ ++K E +++ ++++
Sbjct: 516 LLRDMIS----------------EGVVANTVTYNTLINAFLRRGEIK-EARKLVNEMV-F 557
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKD 288
+G LD YN I G++ + SLF +M P + N LI+ LC+ G V++
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A+ +++ PD T+ +LI G C+ +I+ +F ++ G P T+ +N+L+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
L K V +AC L ++ ++G + +T++IL+ +I
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 25/269 (9%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALR 214
+N L+ A + + IP A IF ++ + FN L+ L
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPR----------------KGCKPDVYTFNSLISGLC 505
Query: 215 KADMKLEFQQVFHKLMD--KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM---PGP- 268
+ D E + L D +G +T YN I+AF G++ + L ++M P
Sbjct: 506 EVD---EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D TYN LI LC+ G+V A ++E + H P + + LI G C++ ++ A
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G P + +NSL++ L +A ++ + +F K+ EG+ T+N L+ L K
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G A L + + G + T+SI++
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 581 DIDMVNTFLSIFLAKGKLSLA-CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+I + NT + F+ G+L A L ++ T G+ P TYNS++ + K+G A +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ +M K C ++ +Y +++ G K+G+ D A +L+ + G + V +N LI+A K
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 700 AGRIDEVNKFFEQMKSSGINPDV-----------------------------------VT 724
RI E + F +M G PDV VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 725 YNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR--EIDKLRYQKASIL 781
YNTLI + G +K+A K + M+ G + +T ++ + L R E+DK R +L
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 782 NEKDDPS 788
+ PS
Sbjct: 592 RDGHAPS 598
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
+ E+ +P +YN ++ V A + +M + P + T+ ++++
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
+ D A ++L + K G + V+Y TLI++L K R++E + E+M G PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
T+N +I K + +A K + ML G P+ +T
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 108 DAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPL---IYNSLLIASLR 164
+ VV + ++N L+++ + E ++++ ++ G +PL YNSL+ R
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVN-----EMVFQG-SPLDEITYNSLIKGLCR 576
Query: 165 NNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
+ A S+F K++ D ++ SN I+ N L+ L ++ M E +
Sbjct: 577 AGEVDKARSLFEKMLR---------------DGHAPSN-ISCNILINGLCRSGMVEEAVE 620
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
F K M +G D +N I+ G + ++F ++ PD T+N L+S L
Sbjct: 621 -FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
CK G V DA ++ ++ P+H T++ L+Q +D R +N
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR-RRFYN 727
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 232/536 (43%), Gaps = 71/536 (13%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKL 283
K M+ KG A + + +I I+ L+ +FS ++ PD T++ LI+ LC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G+V +AL + + + H+P T L+ G C K+ A + ++M GF+P + Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
+L V+ K+ + + A +L KM + +K Y+I+I GL K+G + A+ LF +++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
K GF D++ T+L+ G GRWD
Sbjct: 276 K-----------------------------------GFKADIIIYTTLIRGFCYAGRWDD 300
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQD 523
+L++ + + + P V+ + A ++ F +G E +
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDC---------------FVKEGKLREAEELHKEMIQ 345
Query: 524 ANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDID 583
+ S DT D + +DK AN + + + G ++ +F+I
Sbjct: 346 RGI-SPDTVTYTSLIDGFCKENQLDK-ANHM-----LDLMVSKGCGPNIR-----TFNI- 392
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
++N + L L +LF + GV + TYN+++ F + G A + EM
Sbjct: 393 LINGYCKANLIDDGL----ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+ DI +Y +++ GL G + A I +++ K LDI +YN +I+ + A ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
D+ F + G+ PDV TYN +I K G L +A + M + G +PN T
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ +AF+ L+ K + KL + HK M ++G + DT Y I F L + +
Sbjct: 316 DVVAFSALIDCFVK-EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
M GP++ T+N LI+ CK + D L ++ ++ D TY TLIQG C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ A +F +M + RP + Y LLD L + +A ++FEK+ + ++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
YNI+IHG+ + + A+ LFC L KG D TY+I++
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+N ++ GK+S A L + E G P TY ++ K G A ++ +M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
E+ D Y++II GL K G D A + + + +G DI++Y TLI AGR D
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ K M I PDVV ++ LI+ K G L++A + K M+ G +P+ VT T+L
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+T ++ +G++S A +L + E G P T N++++ G ++A +I M E
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ TY +++ + K G+ LA +L ++ ++ LD V Y+ +I+ L K G +D
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ G D++ Y TLI AG D K L+ M+ TP+ V + L
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 35/224 (15%)
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
L + G+ +LA +L E + + Y+ I+ K G + A+ + EM K
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 649 PADIATYNMIIQGLGKIGRADLA-------------------SAILDRLLKQGGYL---- 685
ADI Y +I+G GR D SA++D +K+G
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 686 ------------DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
D V Y +LI+ K ++D+ N + M S G P++ T+N LI +
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQK 777
KA L+ D + + M G + VT TL E+ KL K
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A LF+ T + P ++ + S + ++ + +M K ++ T +++I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
+ + LA + + +++K G D V ++TLIN L GR+ E + ++M G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++T N L+ G + DA + M++ G PN VT
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 152/601 (25%), Positives = 252/601 (41%), Gaps = 45/601 (7%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+N L+ L + + ++F M+ G + Y + I +G GD ++ F +M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 266 P----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P++ N + L K G+ ++A ++ L PD TY +++ K +I
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A ++ ++M NG P IV NSL++ L+KA +V EA ++F +M + +K + TYN L
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
+ GL KNG+ + A LF + +KG + IT++ + G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRL---MKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
V D+ T +++ G+ K+G+ MK + D V ++AS+ K
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 499 KDYSPMFPSKGDFSEIMSIL--TGSQDANLDSHD--TKIEDEEGDEWSLSPHMDKLANQV 554
I + L Q ANL D I E G + ++S +AN +
Sbjct: 700 ---------------ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 555 KSSG---------YASQLFTPTPGQRVQQKGSDSFDID----MVNTFLSIFLAKGKLSLA 601
G Y+ + + + + +K + + N + L + +A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
+F G P TYN ++ ++ K G +E + + EM C A+ T+N++I G
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIV-MYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
L K G D A + L+ + Y LI+ L K+GR+ E + FE M G P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL-DYL---GREIDKLRYQ 776
+ YN LI KAG A K M+ G P+ T + L D L GR + L Y
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 777 K 777
K
Sbjct: 985 K 985
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 137/564 (24%), Positives = 241/564 (42%), Gaps = 34/564 (6%)
Query: 207 NQLLVALRKADMKLEFQQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
N L + +K +Q + L M + GF L+ + YN IH + ++ +
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 265 MP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M P L TY+ L+ L K + + + +++ +P+ +T+T I+ + K
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I+ A I +M + G P + Y L+D L A K+ A ++FEKM K TY
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+ N ++ + +++K G D +T++I+V +G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK--NPPSKK 498
+ +L T +L+ G+ + R D L ++ + P + ++ K + S
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE-------WSLSPH----- 546
+ + M +KG I++ +A+L S D E + L P
Sbjct: 454 ETFEKM-KTKGIAPNIVAC-----NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 547 -MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF 605
M K ++V A +L + + + G + D+ +VN+ ++ ++ A K+F
Sbjct: 508 MMMKCYSKVGEIDEAIKLLS-----EMMENGCEP-DVIVVNSLINTLYKADRVDEAWKMF 561
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
E + P TYN++++ K G EA + M +K CP + T+N + L K
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
LA +L +++ G D+ YNT+I L K G++ E FF QMK + PD VT
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTL 680
Query: 726 NTLIEVHSKAGLLKDAYKFLKMML 749
TL+ KA L++DAYK + L
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFL 704
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 136/558 (24%), Positives = 232/558 (41%), Gaps = 53/558 (9%)
Query: 254 DLATSFSLFHQMPG-------PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHF 306
D +SFS F + G + C Y ++ L GK+++ V++ + + D
Sbjct: 97 DTDSSFSYFKSVAGNLNLVHTTETCNY--MLEALRVDGKLEEMAYVFDLMQKRIIKRDTN 154
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
TY T+ + + A +M GF YN L+ +L K+ +EA +++ +M
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
EG + S QTY+ L+ GL K ++ L +++ G + T++I +
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
G D+VT T L+ + + D + + ++ G P + +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 487 ME--ASIKNPPSKKKDYSPM------------------FPSKGDFSEIMSILTGSQDA-- 524
++ + ++ S K+ +S M G+F E L +D
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 525 --NLDSHDTKI-----EDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPG-------- 569
NL +++T I D L +M+ L VK + Y +F G
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLG--VKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 570 ----QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
++++ KG + +I N L G+ A ++F + G+ P S TYN +M
Sbjct: 453 LETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
+ K G +EA +++EM E C D+ N +I L K R D A + R+ +
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
+V YNTL+ LGK G+I E + FE M G P+ +T+NTL + K + A K L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 746 KMMLDAGCTPNHVTDTTL 763
M+D GC P+ T T+
Sbjct: 632 FKMMDMGCVPDVFTYNTI 649
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 149/690 (21%), Positives = 272/690 (39%), Gaps = 76/690 (11%)
Query: 86 LRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHL 145
L SL++ +K +V ++N ++ E +++L +
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS-----EM 529
Query: 146 LQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNS 203
++ GC P ++ NSL+ + + + A+ +F+++ E+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM----------------KLKPTV 573
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD-----LATS 258
+ +N LL L K E ++F ++ +KG +T +N C D L
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCL-CKNDEVTLALKML 631
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
F + PD+ TYN +I L K G+VK+A+ + + + PD T TL+ G K
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKA 690
Query: 319 YKIDHATRIF-NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
I+ A +I N ++N +P + + L+ + + A E++ G+ C+
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI---CRD 747
Query: 378 YNILIHGLI----KNGRPEAAYTLFCDLKKK-GQFVDGITYSIIVLQXXXXXXXXXXXXX 432
+ ++ +I K+ A TLF K G TY++++
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK 492
G + D+ T L+ K G+ D L K + + + + +K
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 493 NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLS--PHMDKL 550
G+ D LD + + D + + + P +D L
Sbjct: 868 --------------------------AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
+ + A QLF + + + N ++ F G+ AC LF+ +
Sbjct: 902 SKSGRLY-EAKQLFEGMLDYGCRPNCA------IYNILINGFGKAGEADAACALFKRMVK 954
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
GV P TY+ ++ G +E E+ E D+ YN+II GLGK R +
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 671 ASAILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + + G D+ YN+LI LG AG ++E K + +++ +G+ P+V T+N LI
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+S +G + AY + M+ G +PN T
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 143/322 (44%), Gaps = 27/322 (8%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLR 164
+++D V +F L+ +L + NF E LD ++ + +L T YN+L+ LR
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT---YNTLICGLLR 410
Query: 165 NNHIPLAFSIFLKL------------IELFXXXXXXXXXXAALDSNSN-------SNSIA 205
+ + A +F + I +AL++ N +A
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
N L +L KA E +Q+F+ L D G D+ YN+ + + G++ + L +M
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 266 ----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
PD+ N LI+ L K +V +A ++ + +P TY TL+ G K KI
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A +F M G P TI +N+L D L K +V+ A ++ KM G TYN +
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 382 IHGLIKNGRPEAAYTLFCDLKK 403
I GL+KNG+ + A F +KK
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKK 671
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N +S + G + A L+ ++ ++ P + TY ++ K G EA + M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ C + A YN++I G GK G AD A A+ R++K+G D+ Y+ L++ L GR+D
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK-FLKMMLDAGCTPNHVTDTTL 763
E +F+++K SG+NPDVV YN +I K+ L++A F +M G TP+ T +L
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 764 DYLGREIDKLRYQKASILNE 783
L I + + I NE
Sbjct: 1039 -ILNLGIAGMVEEAGKIYNE 1057
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ PL+ L S +E Q+ + +L GC P IYN L+ + A +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFE-----GMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++++ + + + S+ + L + R D L + K + +
Sbjct: 948 LFKRMVK------------EGVRPDLKTYSVLVDCLCMVGR-VDEGLHY----FKELKES 990
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKD 288
G D YN+ I+ G L + LF++M PDL TYN LI L G V++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
A ++ ++ +P+ FT+ LI+G + K +HA ++ M GF P T Y L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 219/494 (44%), Gaps = 38/494 (7%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+L TYN LI+ C+ ++ AL + + ++P T ++L+ G C +I A +
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM G+RP TI + +L+ LF K SEA L ++M Q G + + TY ++++GL K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G + A+ L ++ + + YS ++ +G +++T
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFP 506
+SL+ + + RW RL+ + E + P V+ + A ++A +K +K Y M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
S D ++ ++ + I + + + +D+ A +F
Sbjct: 359 R-------------SIDPDIFTYSSLI-----NGFCMHDRLDE----------AKHMFEL 390
Query: 567 TPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
+ D F ++ NT ++ F ++ +LF ++ G+ + TY +++
Sbjct: 391 MISK-------DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
F + + A + +M +I TYN ++ GL K G+ + A + + L +
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
I YN +I + KAG++++ F + G+ PDV+ YNT+I + GL ++A
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 746 KMMLDAGCTPNHVT 759
+ M + G P+ T
Sbjct: 564 RKMREDGPLPDSGT 577
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 216/533 (40%), Gaps = 63/533 (11%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
FN+LL A+ K K + + M + G + + + YNI I+ F ++ + +L +M
Sbjct: 88 FNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P + T + L++ C ++ DA+ + + + ++PD T+TTLI G K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A + ++M G +P + Y +++ L K + A L KM ++A+ Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
I L K + A LF +++ KG + ITYS
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYS--------------------------- 299
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKK 499
SL+ + + RW RL+ + E + P V+ + A ++A +K +K
Sbjct: 300 --------SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDAN-LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
Y M D I T S N HD DE + L D N V
Sbjct: 352 LYDEMIKRSID----PDIFTYSSLINGFCMHDRL--DEAKHMFELMISKDCFPNVVT--- 402
Query: 559 YASQLFTPTPGQRVQQKGSDSF----------DIDMVNTFLSIFLAKGKLSLACKLFEIF 608
Y + + +R+ + G + F + T + F A +F+
Sbjct: 403 YNTLINGFCKAKRIDE-GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
GV P TYN+++ K G +A + + I TYN++I+G+ K G+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
+ + L +G D+++YNT+I+ + G +E + F +M+ G PD
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 188/456 (41%), Gaps = 32/456 (7%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y +++ + K+D A +F M + P +N LL + K K L EKM
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G+ + TYNILI+ + + A L + K G +T S ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
G+ D +T T+L+ G+ H + L+ + + P ++ + +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
K +GD ++L + A + E + S +
Sbjct: 233 NGLCK---------------RGDIDLAFNLLNKMEAAKI----------EANVVIYSTVI 267
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
D L + + A LFT + V+ ++ ++ +S + S A +L
Sbjct: 268 DSLC-KYRHEDDALNLFTEMENKGVRP------NVITYSSLISCLCNYERWSDASRLLSD 320
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
E ++P T+N+++ +FVK+G EA + EM ++ DI TY+ +I G R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
D A + + ++ + + ++V YNTLIN KA RIDE + F +M G+ + VTY T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
LI +A +A K M+ G PN +T TL
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 214/528 (40%), Gaps = 62/528 (11%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A G +G + S P P + +N L+S + K+ K + + E + + +T
Sbjct: 69 AIGLFGGMVKS------RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y LI C+ +I A + +M G+ P + +SLL+ ++S+A L ++M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G + T+ LIHGL + + A L VD +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVAL----------VDRMV--------------- 217
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
RG +LVT ++ G+ K G D L+ + + V+ + +
Sbjct: 218 ----------QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 488 EASIKNPPSKKKDYSPMF---------PSKGDFSEIMSILTGSQ---DANLDSHDTKIED 535
++ K + D +F P+ +S ++S L + DA+ D
Sbjct: 268 DSLCKY--RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI--- 322
Query: 536 EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAK 595
E ++P++ + + +L K S DI ++ ++ F
Sbjct: 323 ----ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
+L A +FE+ P TYN++++ F K +E + EM ++ + TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+I G + D A + +++ G + +I+ YNTL++ L K G++++ FE ++
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
S + P + TYN +IE KAG ++D + + G P+ + T+
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + FN L+ A K +E ++++ +++ K+ D + Y+ I+ F L +
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+F M P++ TYN LI+ CK ++ + + ++ +++ + TYTTLI G
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
+ D+A +F QM ++G P + YN+LLD L K K+ +A +FE + + ++ +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
TYNI+I G+ K G+ E + LFC L KG D I Y+ ++
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + +N L+ KA E ++F + M ++G +T Y IH F D + +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFRE-MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F QM P++ TYN L+ LCK GK++ A++V+E L +P +TY +I+G CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
K++ +F + G +P I+YN+++ + EA LF KM ++G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 223/499 (44%), Gaps = 40/499 (8%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+L TY+ LI+ C+ ++ AL V + ++PD T +L+ G C +I A +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
QM G++P + +N+L+ LF+ + SEA L ++M +G + TY I+++GL K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 389 GRPEAAYTLFCDLKKKGQFVDGIT-YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G + A +L + ++G+ G+ Y+ I+ +G ++VT
Sbjct: 235 GDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMF 505
SL+ + +GRW RL+ + E + P V+ + A ++A +K +K Y M
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
S D ++ ++ + I + + + +D+ A +F
Sbjct: 354 KR-------------SIDPDIFTYSSLI-----NGFCMHDRLDE----------AKHMFE 385
Query: 566 PTPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
+ D F ++ NT + F ++ +LF ++ G+ + TY +++
Sbjct: 386 LMISK-------DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
F + + A + +M DI TY++++ GL G+ + A + + L +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 685 LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKF 744
DI YN +I + KAG++++ F + G+ P+VVTY T++ + GL ++A
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 745 LKMMLDAGCTPNHVTDTTL 763
+ M + G P+ T TL
Sbjct: 559 FREMKEEGPLPDSGTYNTL 577
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 217/526 (41%), Gaps = 58/526 (11%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A +GD+ S P P + ++ L+S + K+ K + + E + + +T
Sbjct: 65 AVNLFGDMVKS------RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y+ LI C+ ++ A + +M G+ P + NSLL+ ++S+A L +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G + T+N LIHGL ++ R A L + KG D +TY I+V
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV---------- 228
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
G+ K G D L+K + +G + P V+ + +
Sbjct: 229 -------------------------NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 488 EA--SIKNPPS-----KKKDYSPMFPSKGDFSEIMSILTGS---QDANLDSHDTKIEDEE 537
+A + KN + D + P+ ++ ++ L DA+ D
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----- 318
Query: 538 GDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGK 597
E ++P++ + + + +L K S DI ++ ++ F +
Sbjct: 319 --ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
L A +FE+ P TYN+++ F K +E + EM ++ + TY
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
+I G + D A + +++ G DI+ Y+ L++ L G+++ FE ++ S
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ PD+ TYN +IE KAG ++D + + G PN VT TT+
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 128/590 (21%), Positives = 220/590 (37%), Gaps = 87/590 (14%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ F++LL A+ K + K + + M G + + + Y+I I+ F L+ + ++
Sbjct: 82 VEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI------- 312
+M PD+ T N L++ C ++ DA+ + + +QPD FT+ TLI
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 313 --------------QGC--------------CKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+GC CK ID A + +M PG ++YN
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+++D L V++A LF +M +G++ + TYN LI L GR A L D+ ++
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 405 GQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWT 464
+ +T+S ++ R D+ T +SL+ G H R D
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 465 DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
+ + + D P V+ + ++ K
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCK-------------------------------- 408
Query: 525 NLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ----QKGSDSF 580
K DE + + + N V + F Q Q SD
Sbjct: 409 ------AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 581 --DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
DI + L GK+ A +FE + ++P YTYN ++ K G + W
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ + K ++ TY ++ G + G + A A+ + ++G D YNTLI A
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ G + +M+S D T + + L K FLKM+
Sbjct: 583 RDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDK---SFLKML 629
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 5/222 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + F+ L+ A K +E ++++ +++ K+ D + Y+ I+ F L +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+F M P++ TYN LI CK +V + + ++ +++ + TYTTLI G
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
+ + D+A +F QM ++G P + Y+ LLD L KV A +FE + + ++
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
TYNI+I G+ K G+ E + LFC L KG + +TY+ ++
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + +N L+ KA E ++F + M ++G +T Y IH F + + +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFRE-MSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F QM PD+ TY+ L+ LC GKV+ AL+V+E L +PD +TY +I+G CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ +F + G +P + Y +++ + EA LF +M +EG T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLK 402
YN LI +++G A+ L +++
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMR 598
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
KL A LF ++ P ++ ++S+ K F+ ++ +M ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
++I + + LA A+L +++K G DIV N+L+N RI + QM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G PD T+NTLI + +A + M+ GC P+ VT
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 238/548 (43%), Gaps = 47/548 (8%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGK 285
M + D + YN I F +L + L ++M G L T+ LI CK GK
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ +A+ +++ + D YT+LI+G C ++D +F+++ G P I YN+
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+ K ++ EA ++FE M + GV+ + TY LI GL G+ + A L + +K
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+ + +TY+II+ + G V D V I LM R D
Sbjct: 348 EEPNAVTYNIIINKLCKD----------------GLVADAVEIVELM-----KKRRTRPD 386
Query: 466 RLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDAN 525
+ ++ G L K ++ + K KD S P ++ ++ L +
Sbjct: 387 NITYNILLGGLCA-----KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 526 --LDSHDTKIED-EEGDEWSLSPHMDKLANQVKSSG---YASQLFTPTPGQRVQQKGSDS 579
LD +D +E GD + + L N +G A +L+ ++ + SD+
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNI----LLNSTLKAGDVNKAMELWKQISDSKI-VRNSDT 496
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+ + F G L++A L + + P + YN ++SS K+G ++AW +
Sbjct: 497 Y-----TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
EM D+ ++N++I G K G A ++L + + G D+ Y+ LIN K
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HV 758
G +DE FF++M SG PD +++++ G + +K ++D + +
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Query: 759 TDTTLDYL 766
T T +DY+
Sbjct: 672 TCTVMDYM 679
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 147/646 (22%), Positives = 260/646 (40%), Gaps = 96/646 (14%)
Query: 156 NSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLL---VA 212
N+L+ +R+ + LAFS + K++E +++ N ++ + LL V
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLE----------------TDTFINFVSLSGLLECYVQ 119
Query: 213 LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCT 272
+RK F LM K+GFA + + +NI
Sbjct: 120 MRKTG----FAFGVLALMLKRGFAFNVYNHNI---------------------------- 147
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
L+ LC+ + A+ + ++ + PD F+Y T+I+G C+ +++ A + N+M
Sbjct: 148 ---LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
+G + + L+D KA K+ EA ++M G++A Y LI G G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 393 AAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLM 452
LF ++ ++G ITY+ ++ RG ++ T T L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 453 VGIHKHGRWDWTDRLMKHVREGDLVPKVLRW--------KAGMEASIKNPPS--KKKDYS 502
G+ G+ +L+ + E D P + + K G+ A KK+
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 503 P----------MFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLAN 552
P +KGD E +L L D+ D + ++ H N
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLY------LMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 553 QVKSSGYASQLFTPT--PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
++ + L G RV N L+ L G ++ A +L++ ++
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVT-----------TNILLNSTLKAGDVNKAMELWKQISD 487
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
+ + S TY +++ F K G N A ++ +M + YN ++ L K G D
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 671 ASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
A + + + + + D+V +N +I+ KAG I M +G++PD+ TY+ LI
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 731 VHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYL--GREIDKL 773
K G L +A F M+D+G P+ H+ D+ L Y E DKL
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 195/491 (39%), Gaps = 54/491 (10%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYN 274
K++ F K M G D Y I F G+L +LF ++ P TYN
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
LI CKLG++K+A ++E + +P+ +TYT LI G C K A ++ N M
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
P + YN +++ L K V++A ++ E M + + TYNIL+ GL G + A
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 395 YTLFCDLKKKGQFVDG--ITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLM 452
L + K + D I+Y+ ++ + D VT L+
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 453 VGIHKHGRWDWTDRLMKHVREGDLVPKVLRW--------KAGMEASIKNPPSKKKDYSPM 504
K G + L K + + +V + K GM K K + S +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR-VSEL 525
Query: 505 FPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
PS D++ ++S L ++ +LD W L M
Sbjct: 526 QPSVFDYNCLLSSLC--KEGSLDQA-----------WRLFEEM----------------- 555
Query: 565 TPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
Q+ ++ D+ N + L G + A L + AG+ P +TY+ ++
Sbjct: 556 ---------QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
+ F+K GY +EA + +M + D + +++ G D + ++ +L+ +
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Query: 685 LDIVMYNTLIN 695
LD + T+++
Sbjct: 667 LDKELTCTVMD 677
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 130/351 (37%), Gaps = 23/351 (6%)
Query: 63 LHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLH 122
L N P + Y++I+ L + +K+ ++N LL
Sbjct: 337 LQLLNLMIEKDEEP-NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELF 182
L + E ++L Y+ + + YN+L+ + N + A I+ L+E
Sbjct: 396 GLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 183 XXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGY 242
+ + N LL + KA + +++ ++ D K ++ Y
Sbjct: 455 ----------------GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK-IVRNSDTY 497
Query: 243 NICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNA 298
I F G L + L +M P + YNCL+S LCK G + A ++E++
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 299 CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSE 358
+ PD ++ +I G K I A + M G P Y+ L++ K + E
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 359 ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
A F+KM G + + ++ I G + L L K +D
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 203/496 (40%), Gaps = 68/496 (13%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ LI L + A+ V E L QPD F Y LI G CK +ID ATR+
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++M + F P T+ YN ++ L K+ A ++ ++ + + + TY ILI +
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G + A L ++ +G D TY+ I+ +G D+++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
L+ + G+W+ EG+ K + MF
Sbjct: 301 YNILLRALLNQGKWE----------EGE-----------------------KLMTKMFSE 327
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
K D +++T S D KIE+ L +K G TP
Sbjct: 328 KCD----PNVVTYSILITTLCRDGKIEEAM-----------NLLKLMKEKG-----LTP- 366
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
D++ D ++ F +G+L +A + E G P YN+++++
Sbjct: 367 ----------DAYSYD---PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K G ++A I ++GE C + ++YN + L G A ++ ++ G D
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ YN++I+ L + G +DE + M+S +P VVTYN ++ KA ++DA L+
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 748 MLDAGCTPNHVTDTTL 763
M+ GC PN T T L
Sbjct: 534 MVGNGCRPNETTYTVL 549
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 130 FHETLQILDYIQQRHLLQPG-----------CTPLIYNSLLIASLRNNHIPLAFSIFLKL 178
FH + + +YI+ HLL+ CT LI +LRN IP A + +++
Sbjct: 96 FHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKG---FFTLRN--IPKAVRV-MEI 149
Query: 179 IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALD 238
+E F + A+N L+ K + + +V + M K F+ D
Sbjct: 150 LEKF----------------GQPDVFAYNALINGFCKMNRIDDATRVLDR-MRSKDFSPD 192
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWE 294
T YNI I + G L + + +Q+ P + TY LI G V +AL + +
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
++ + +PD FTY T+I+G CK +D A + + G P I YN LL L
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
K E +L KM E + TY+ILI L ++G+ E A L +K+KG D +Y
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 415 IIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
++ G + D+V +++ + K+G+ D
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 23/281 (8%)
Query: 143 RHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSN 200
R+L GC P + YN LL A L + K+ +
Sbjct: 287 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM----------------FSEKCD 330
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N + ++ L+ L + D K+E KLM +KG D + Y+ I AF G L +
Sbjct: 331 PNVVTYSILITTLCR-DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
M PD+ YN +++ LCK GK AL ++ L P+ +Y T+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+ A + +M +NG P I YNS++ L + V EA +L M S
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
TYNI++ G K R E A + + G + TY++++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 171/463 (36%), Gaps = 110/463 (23%)
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEAC---QLFEKMAQEGVK 372
C++ + + M G+ P I+ L+ F + +A ++ EK Q V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
A YN LI+G K R + A + ++ K
Sbjct: 160 A----YNALINGFCKMNRIDDATRVLDRMRSKD--------------------------- 188
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK 492
F D VT ++ + G+ D +++ + + P V+ + +EA++
Sbjct: 189 --------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM- 239
Query: 493 NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLAN 552
L G D L KL +
Sbjct: 240 -------------------------LEGGVDEAL----------------------KLMD 252
Query: 553 QVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAG 612
++ S G +FT NT + +G + A ++ G
Sbjct: 253 EMLSRGLKPDMFT-------------------YNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
+P +YN ++ + + +G + E ++T+M + C ++ TY+++I L + G+ + A
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+L + ++G D Y+ LI A + GR+D +F E M S G PD+V YNT++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREIDKLR 774
K G A + + + GC+PN + +T L DK+R
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 30/309 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFS 173
++N ++ SL L++L+ LL C P + Y L+ A++ + A
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLN-----QLLSDNCQPTVITYTILIEATMLEGGVDEA-- 247
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADM-KLEFQQVFHKLMDK 232
LKL++ L + +N ++ + K M F+ V + ++
Sbjct: 248 --LKLMD------------EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV--RNLEL 291
Query: 233 KGFALDTWGYNICIHAF---GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKD 288
KG D YNI + A G W + + +F + P++ TY+ LI+ LC+ GK+++
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A+ + + + PD ++Y LI C+ ++D A M ++G P + YN++L
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
L K K +A ++F K+ + G + +YN + L +G A + ++ G
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 409 DGITYSIIV 417
D ITY+ ++
Sbjct: 472 DEITYNSMI 480
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 28/309 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ L+ + ++ E L+++D +L G P YN+++ + + AF
Sbjct: 230 TYTILIEATMLEGGVDEALKLMD-----EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ ++ +EL + I++N LL AL E +++ K+ +K
Sbjct: 285 M-VRNLEL---------------KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
+ Y+I I G + + +L M PD +Y+ LI+ C+ G++ A
Sbjct: 329 CDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ E + + PD Y T++ CK K D A IF ++ G P + YN++
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
L+ + A + +M G+ TYN +I L + G + A+ L D++
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 410 GITYSIIVL 418
+TY+I++L
Sbjct: 508 VVTYNIVLL 516
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 55/290 (18%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
YS+++ +L R +K+ + S++PL+ + ++ L+
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE-- 392
Query: 141 QQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSN 198
++ GC P I YN++L +N A IF KL E+
Sbjct: 393 ---TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV----------------G 433
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATS 258
+ NS ++N + AL + K+ + H +++ +D
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKI---RALHMILEMMSNGID-------------------- 470
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
PD TYN +IS LC+ G V +A + D+ +C P TY ++ G CK
Sbjct: 471 ---------PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
++I+ A + M NG RP Y L++ + A +EA +L + +
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 217/493 (44%), Gaps = 34/493 (6%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TY+ LI LCK+ +++DA + ++++ D+ TY+ LI G K D A + ++M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
++G +Y+ + V+ K + +A LF+ M G+ Q Y LI G +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
Y L ++KK+ + TY +V G ++V T+L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ ++ R+ R++K ++E + P + + + + I +K+ D + F
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI---IGLSKAKRMDEARSF------ 509
Query: 512 SEIMSILTGSQDANLDSHDTKIEDE-EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ 570
++ ++ N ++ I E E++ DK +++ G T
Sbjct: 510 --LVEMVENGLKPNAFTYGAFISGYIEASEFA---SADKYVKEMRECGVLPNKVLCTG-- 562
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
++N + KGK+ AC + + G+ + TY +M+ K
Sbjct: 563 -------------LINEYCK----KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
++A I EM K D+ +Y ++I G K+G AS+I D ++++G ++++Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
N L+ ++G I++ + ++M G++P+ VTY T+I+ + K+G L +A++ M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 751 AGCTPNHVTDTTL 763
G P+ TTL
Sbjct: 726 KGLVPDSFVYTTL 738
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 207/495 (41%), Gaps = 45/495 (9%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TY ++ +C G + A + +++ A +P+ YTTLI+ + + A R+ +M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
G P YNSL+ L KA ++ EA +M + G+K + TY I G I+
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+A ++++ G + + + ++ + +G + D T T L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
M G+ K+ + D + + + +R + P V + + F G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING---------------FSKLGNM 643
Query: 512 SEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQR 571
+ SI +E E L+P++ + + G+ +
Sbjct: 644 QKASSIF-----------------DEMVEEGLTPNV--IIYNMLLGGFCRSGEIEKAKEL 684
Query: 572 VQQKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+ + + V T + + G L+ A +LF+ G+ P S+ Y +++ +
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 630 KGYFNEAWAIITEMG--EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK----QGG 683
N+ IT G +K C + A +N +I + K G+ +L + +L+RL+ + G
Sbjct: 745 ---LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 684 YLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
+ V YN +I+ L K G ++ + F QM+++ + P V+TY +L+ + K G + +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 744 FLKMMLDAGCTPNHV 758
+ AG P+H+
Sbjct: 862 VFDEAIAAGIEPDHI 876
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/578 (19%), Positives = 209/578 (36%), Gaps = 81/578 (14%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M K+ + + Y + GDL ++++ +M P++ Y LI + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
DA+ V +++ PD F Y +LI G K ++D A +M NG +P Y +
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 346 LLDVLFKAT-----------------------------------KVSEACQLFEKMAQEG 370
+ +A+ KV EAC + M +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
+ +TY +L++GL KN + + A +F +++ KG D +Y +++
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
G +++ L+ G + G + L+ + L P + + ++
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 491 IKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
K+ GD +E + + K++ D + + +D
Sbjct: 708 CKS---------------GDLAEAFRLF----------DEMKLKGLVPDSFVYTTLVDGC 742
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
++ A +F +KG S N ++ GK L ++ +
Sbjct: 743 C-RLNDVERAITIFG------TNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 611 AGVD----PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
D P TYN ++ K+G A + +M + TY ++ G K+G
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS-----SGINPD 721
R + D + G D +MY+ +INA K G + +QM + G
Sbjct: 855 RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS 914
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ T L+ +K G ++ A K ++ M+ P+ T
Sbjct: 915 ISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 34/354 (9%)
Query: 74 SSPLSPSA--YSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFH 131
+S L P A Y+ ++ R +K+ +V+ P ++ ++ + S +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 132 ETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXX 189
I+ + ++ GC P +IY +L+ L+N+ A + ++ E
Sbjct: 435 GAYNIV-----KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE--------- 480
Query: 190 XXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF 249
+ +N L++ L KA +++ + F M + G + + Y I +
Sbjct: 481 -------QGIAPDIFCYNSLIIGLSKAK-RMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 250 GCWGDLATSFSLFHQM------PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQP 303
+ A++ +M P LCT LI+ CK GKV +A + +
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 304 DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF 363
D TYT L+ G K K+D A IF +M G P Y L++ K + +A +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 364 EKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++M +EG+ + YN+L+ G ++G E A L ++ KG + +TY I+
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 133/355 (37%), Gaps = 83/355 (23%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+ L+ L K D + +++F + M KG A D + Y + I+ F G++ + S+F +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFRE-MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 266 ------PG---------------------------------PDLCTYNCLISVLCKLGKV 286
P P+ TY +I CK G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF------------------ 328
+A +++++ PD F YTTL+ GCC+ ++ A IF
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 329 ----------------NQMHNNGF----RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
N++ + F +P + YN ++D L K + A +LF +M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
+ + TY L++G K GR + +F + G D I YS+I+
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 429 XXXXXXXXXXRGFVVD-----LVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+ V D + T +L+ G K G + +++M+++ +P
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 133/312 (42%), Gaps = 31/312 (9%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSI 174
+ L+ + + + F + +++L + + + G P I YNSL+I + + A S
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVL-----KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 175 FLKLIE-----------LFXXXXXXXXXXAALDSNSNS--------NSIAFNQLLVALRK 215
++++E F A+ D N + L+ K
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLC 271
+E + ++D+ G D Y + ++ + + +F +M G PD+
Sbjct: 570 KGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
+Y LI+ KLG ++ A +++++ P+ Y L+ G C++ +I+ A + ++M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
G P + Y +++D K+ ++EA +LF++M +G+ Y L+ G +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 392 EAAYTLFCDLKK 403
E A T+F KK
Sbjct: 749 ERAITIFGTNKK 760
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL E G+ P+ YTY+ ++ K +A +++ EM D TY+++I
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL K AD A ++ ++ G + MY+ I + K G +++ F+ M +SG+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 721 DVVTYNTLIEVHSK-----------------------------------AGLLKDAYKFL 745
Y +LIE + + +G L AY +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 746 KMMLDAGCTPNHVTDTTL 763
K M+ +GC PN V TTL
Sbjct: 441 KEMIASGCRPNVVIYTTL 458
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 100/256 (39%), Gaps = 43/256 (16%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N I +N LL ++ ++E + M KG + Y I + GDLA +F L
Sbjct: 661 NVIIYNMLLGGFCRSG-EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVK--------------------DALIVW---- 293
F +M PD Y L+ C+L V+ +ALI W
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 294 -------EDLNACAH-------QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
E LN +P+ TY +I CK ++ A +F+QM N P
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
I Y SLL+ K + +E +F++ G++ Y+++I+ +K G A L
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 400 DLKKKGQFVDGITYSI 415
+ K DG SI
Sbjct: 900 QMFAKNAVDDGCKLSI 915
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 232/558 (41%), Gaps = 66/558 (11%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAF---GCWGDLATSFSLFHQMP-GPDLCTYNCLISVL 280
VF ++ + G YN ++AF W + + F+ F P+L TYN LI +
Sbjct: 100 VFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
CK + + A + + +PD F+Y+T+I K K+D A +F++M G P
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEG-VKASCQTYNILIHGLIKNGRPEAAYTLFC 399
YN L+D K A +L++++ ++ V + +T+NI+I GL K GR + ++
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 400 DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG 459
+K+ + D TYS ++ R +D+VT +++ G + G
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 460 RWD-----WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ W R+M+H ++V + K +E + K D + M
Sbjct: 340 KIKESLELW--RIMEHKNSVNIVSYNILIKGLLE-------NGKIDEATMI--------- 381
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK---------SSGYASQLFT 565
W L P A++ +GY ++
Sbjct: 382 --------------------------WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 566 PTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
Q V+ G D+ + + K +L A L + ++ GV+ S+ N+++
Sbjct: 416 VM--QEVESSGG-HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
++ EA + EMG+ C + +YN++I GL K G+ ASA + +L+ G
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
D+ Y+ L+ L + +ID + + Q SG+ DV+ +N LI G L DA +
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 746 KMMLDAGCTPNHVTDTTL 763
M CT N VT TL
Sbjct: 593 ANMEHRNCTANLVTYNTL 610
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 182/435 (41%), Gaps = 27/435 (6%)
Query: 61 HKLHFFNWCRSHHSSPLSPSA--YSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFN 118
HK W R S + P+ +++++ LS+ +KQ+ +++
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 119 PLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKL 178
L+H L + N + + + + +R + + YN++L R I + ++
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDER---KASIDVVTYNTMLGGFCRCGKIKESLELW--- 348
Query: 179 IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALD 238
++ ++ N +++N L+ L + + K++ + +LM KG+A D
Sbjct: 349 --------------RIMEHKNSVNIVSYNILIKGLLE-NGKIDEATMIWRLMPAKGYAAD 393
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWE 294
Y I IH G + + + ++ D+ Y +I LCK ++++A + +
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
+++ + + LI G + ++ A+ +M NG RP + YN L+ L KA
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
K EA ++M + G K +TY+IL+ GL ++ + + A L+ + G D + ++
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 415 IIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREG 474
I++ R +LVT +LM G K G + + ++ +
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Query: 475 DLVPKVLRWKAGMEA 489
L P ++ + M+
Sbjct: 634 GLQPDIISYNTIMKG 648
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 589 LSIFLAKGKLSLACKLFEIFTEA----GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
LS+ GK S+ + ++F G +P +YN+++++FV+ + + ++
Sbjct: 82 LSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFE 141
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
++ TYN++I+ K + A LD + K+G D+ Y+T+IN L KAG++D
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML-DAGCTPN----HVT 759
+ + F++M G+ PDV YN LI+ K K A + +L D+ PN ++
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 760 DTTLDYLGREIDKLRYQKASILNEKD 785
+ L GR D L+ + NE++
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNERE 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
K+ LA +L+ F ++G++ +N ++ G ++A ++ M + C A++ TYN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+++G K+G ++ A+ I + K G DI+ YNT++ L + +FF+ ++
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 717 GINPDVVTYNTLIE 730
GI P V T+N L+
Sbjct: 669 GIFPTVYTWNILVR 682
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 215/514 (41%), Gaps = 44/514 (8%)
Query: 254 DLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
DL ++ LF +M P P+ T++ LI K G+++ AL ++ + P F
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
T+IQG K K + A ++F++ G V N++L L K K EA +L KM
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
G+ + +YN ++ G + + A +F ++ +KG + TYSI++
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKH-VREGDLVPKVLRWKAGME 488
V+ V +++ G+ K G+ L+ + + E L + + + ++
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM- 547
K + +DS E+ G+ +SP++
Sbjct: 593 GFFK------------------------------EGEMDSAVAAYEEMCGN--GISPNVI 620
Query: 548 --DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF 605
L N + + Q ++ KG DI + F + + A LF
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMR--DEMKNKGV-KLDIPAYGALIDGFCKRSNMESASALF 677
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
E G++P YNS++S F G A + +M + D+ TY +I GL K
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
G LAS + + G D ++Y ++N L K G+ +V K FE+MK + + P+V+ Y
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
N +I H + G L +A++ MLD G P+ T
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 159/778 (20%), Positives = 289/778 (37%), Gaps = 130/778 (16%)
Query: 37 PQHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSS--------------PLSPSAY 82
P+ K + ++ +L N +P L F+NW R S SP Y
Sbjct: 67 PEQKD---DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETY 123
Query: 83 S----LILRSLSR----PAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETL 134
L++R +S P S K ++ ++FN LL++ +T
Sbjct: 124 GRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAY---SKDRQTD 180
Query: 135 QILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXX 192
+D + Q +L+ P N L A ++ N + A ++ +++ +
Sbjct: 181 HAVDIVNQ--MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAI----------- 227
Query: 193 AALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW 252
+ +++ L+ A + + E +V + +++ G D+ Y++ + A
Sbjct: 228 -----GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER-GAEPDSLLYSLAVQACCKT 281
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
DLA + SL +M LC P TYT++I
Sbjct: 282 LDLAMANSLLREMKEKKLCV------------------------------PSQETYTSVI 311
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
K +D A R+ ++M ++G + SL+ K + A LF+KM +EG
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII----VLQXXXXXXXXX 428
+ T+++LI KNG E A + K V G+T S+ ++Q
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFY-----KKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
+ ++ +++ + K G+ D L+ + + P V+ + M
Sbjct: 427 EALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIM-----------SILTGSQDANLDSHDTKIEDEE 537
+ K D + + FS I+ SIL D +HD E
Sbjct: 487 GHCR---QKNMDLARIV-----FSNILEKGLKPNNYTYSILI---DGCFRNHD------E 529
Query: 538 GDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV------------ 585
+ + HM ++ ++ +G Q + Q + +M+
Sbjct: 530 QNALEVVNHMT--SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ + F +G++ A +E G+ P TY S+M+ K ++A + EM
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K DI Y +I G K + ASA+ LL++G +YN+LI+ G +
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+++M G+ D+ TY TLI+ K G L A + M G P+ + T +
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 165/384 (42%), Gaps = 26/384 (6%)
Query: 118 NPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLK 177
N +L L E ++L ++ R + G + YN++++ R ++ LA +F
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGI---GPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 178 LIE------------LFXXXXXXXXXXAALD-------SNSNSNSIAFNQLLVALRKADM 218
++E L AL+ SN N + + ++ L K
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYN 274
+ +++ ++++K + YN I F G++ ++ + + +M G P++ TY
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
L++ LCK ++ AL + +++ + D Y LI G CK ++ A+ +F+++
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
G P +YNSL+ + A L++KM ++G++ TY LI GL+K+G A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
L+ +++ G D I Y++IV +++ +++ G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 455 IHKHGRWDWTDRLMKHVREGDLVP 478
++ G D RL + + ++P
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILP 827
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 201/509 (39%), Gaps = 39/509 (7%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
NS+ F+ L+ RK + ++E F+K M+ G + + I + + L
Sbjct: 373 NSVTFSVLIEWFRK-NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 262 FHQMPGPDLCTY---NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
F + L N ++S LCK GK +A + + + P+ +Y ++ G C+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+D A +F+ + G +P Y+ L+D F+ A ++ M ++ + Y
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 379 NILIHGLIKNGRPEAAYTLFCDL-KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+I+GL K G+ A L ++ ++K V ++Y+ I+
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
G +++T TSLM G+ K+ R D + ++ + + + A ++ K
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR---- 667
Query: 498 KKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
S M + FSE++ EEG S P + L + ++
Sbjct: 668 ----SNMESASALFSELL--------------------EEGLNPS-QPIYNSLISGFRNL 702
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
G + + K D+ T + L G L LA +L+ G+ P
Sbjct: 703 G---NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
Y I++ KKG F + + EM + ++ YN +I G + G D A + D
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEV 706
+L +G D ++ L++ G+ G + V
Sbjct: 820 MLDKGILPDGATFDILVS--GQVGNLQPV 846
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLN 297
YN I F G++ + L+ +M DL TY LI L K G + A ++ ++
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
A PD YT ++ G K + ++F +M N P ++YN+++ ++ +
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
EA +L ++M +G+ T++IL+ G + N +P A +L
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P TY S++ + VK+G ++A + EM ++ +I G K DL SA+
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCK--NNDLVSAL 359
Query: 675 L--DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+ D++ K+G + V ++ LI K G +++ +F+++M+ G+ P V +T+I+
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGRE 769
K ++A K + G V +T L +L ++
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 149/671 (22%), Positives = 259/671 (38%), Gaps = 65/671 (9%)
Query: 152 PLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNS-------- 203
P +Y+ L+ LR I + IF +L+ L+ A L S S
Sbjct: 163 PSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 204 -----------IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW 252
+A +L+ + A+ E + M+K G+A YN +H +
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 253 GDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G + L M D+CTYN LI LC+ ++ ++ D+ P+ TY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
TLI G K+ A+++ N+M + G P + +N+L+D EA ++F M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
+G+ S +Y +L+ GL KN + A + +K+ G V ITY+ ++
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
G D+VT ++L+ G K GR+ ++ + L P + + +
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 489 ASIKNPPSKK--KDYSPMF---------------------PSKGDFSEIMSILTGSQD-A 524
+ K+ + Y M + E M +T
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 525 NLDSHDTKI-----EDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGS-- 577
N S D I E +S+ M K+ + Y S L G +++
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 578 -------DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
+ D M NT L+ G L+ A LF + + P SYTY S++S +K
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 631 GYFNEA--WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
G A +A E + P + Y + G+ K G+ +++ G DIV
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKV-MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
N +I+ + G+I++ N +M + P++ TYN L+ +SK + ++ + +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 749 LDAGCTPNHVT 759
+ G P+ +T
Sbjct: 821 ILNGILPDKLT 831
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 128/573 (22%), Positives = 237/573 (41%), Gaps = 50/573 (8%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCK 282
++ M +G D + +N+ + + G +A + M P+ +++CLI+
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
G+ A V++++ H P FTY +L++G CK + A + +H T++
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN+LL + K+ +++A LF +M Q + TY LI GL + G+ A + +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 403 KKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+G + + + Y+ V G D+VT +++ G + G+
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKN----PPSKKKDYSPMF------------ 505
+ T+ DL+P++ G + N SK+KD S F
Sbjct: 776 EKTN---------DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKI------EDEEGDEWSLSPHMDKLANQVKSSGY 559
P K S++ G ++N+ KI E D ++ + L ++ ++G
Sbjct: 827 PDK---LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF----NMLISKCCANGE 879
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
+ F +V S D D + +S+ + + + ++ G+ P S
Sbjct: 880 INWAFDLV---KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 620 YNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
Y +++ + G A+ + EM K+CP ++A M+ + L K G+AD A+ +L +
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV-RALAKCGKADEATLLLRFM 995
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
LK I + TL++ K G + E + M + G+ D+V+YN LI G +
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL--DYLGRE 769
A++ + M G N T L L RE
Sbjct: 1056 ALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-G 644
+ + ++L +G + + ++F + G +P YT N+I+ S VK G W+ + EM
Sbjct: 167 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 226
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K+CP D+AT+N++I L G + +S ++ ++ K G IV YNT+++ K GR
Sbjct: 227 RKICP-DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ + MKS G++ DV TYN LI ++ + Y L+ M PN VT TL
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 183/445 (41%), Gaps = 73/445 (16%)
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
VY+ L+ V + + ++ ++F M G S T N ++ ++K+G + ++ ++
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 402 KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
K R D+ T L+ + G +
Sbjct: 225 LK-----------------------------------RKICPDVATFNILINVLCAEGSF 249
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
+ + LM+ + + P ++ + + + KG F + +L
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLH---------------WYCKKGRFKAAIELL--- 291
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFD 581
D +K D + +++ H +N++ + GY L +R+ ++
Sbjct: 292 -----DHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGY---LLLRDMRKRMIHPNEVTY- 341
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
NT ++ F +GK+ +A +L G+ P T+N+++ + +G F EA +
Sbjct: 342 ----NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 642 EMGEK-LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M K L P+++ +Y +++ GL K DLA R+ + G + + Y +I+ L K
Sbjct: 398 MMEAKGLTPSEV-SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G +DE +M GI+PD+VTY+ LI K G K A + + + G +PN +
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 761 TTLDY----LGREIDKLRYQKASIL 781
+TL Y +G + +R +A IL
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMIL 541
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 130/693 (18%), Positives = 274/693 (39%), Gaps = 68/693 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSI- 174
++N +LH F +++LD+++ + + CT YN L+ R+N I + +
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCT---YNMLIHDLCRSNRIAKGYLLL 326
Query: 175 --------------FLKLIELFXXXXXXXXXXAALDS----NSNSNSIAFNQLLVA-LRK 215
+ LI F L+ + N + FN L+ + +
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC---- 271
+ K E ++F+ +M+ KG Y + + + + + +M +C
Sbjct: 387 GNFK-EALKMFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TY +I LCK G + +A+++ +++ PD TY+ LI G CK + A I ++
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+ G P I+Y++L+ + + EA +++E M EG T+N+L+ L K G+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
A + G + +++ ++ G T SL
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ G+ K G ++ +K + + + + A K+ G+
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS---------------GNL 669
Query: 512 SEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQR 571
++ +S+ ++ D ++ + + L + K+ + LF +
Sbjct: 670 AKAVSLFGEMVQRSILP----------DSYTYTSLISGLCRKGKT--VIAILF----AKE 713
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
+ +G+ + M F+ G+ E G P T N+++ + + G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA-ILDRLLKQGGYL-DIVM 689
+ ++ EMG + ++ TYN+++ G K R D++++ +L R + G L D +
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSIILNGILPDKLT 831
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
++L+ + ++ ++ K + G+ D T+N LI G + A+ +K+M
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 750 DAGCTPNHVT-DTTLDYLGREIDKLRYQKASIL 781
G + + T D + L R R+Q++ ++
Sbjct: 892 SLGISLDKDTCDAMVSVLNRN---HRFQESRMV 921
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 221 EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYN----CL 276
E + V H+ M K+G + ++ Y I+ GD+ T+F + +M +C N +
Sbjct: 917 ESRMVLHE-MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
+ L K GK +A ++ + P ++TTL+ CCK + A + M N G
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+ + YN L+ L ++ A +L+E+M +G A+ TY LI GL+
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 126/339 (37%), Gaps = 26/339 (7%)
Query: 71 SHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNF 130
HH + + Y +L+ L + S+ + +N LL ++ S N
Sbjct: 613 GHHPTFFT---YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 131 HETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXX 190
+ + + + QR +L T Y SL+ R +A +F K
Sbjct: 670 AKAVSLFGEMVQRSILPDSYT---YTSLISGLCRKGKTVIAI-LFAK------------- 712
Query: 191 XXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFG 250
A N N + + + + KA + + F + MD G D N I +
Sbjct: 713 -EAEARGNVLPNKVMYTCFVDGMFKAG-QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Query: 251 CWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHF 306
G + + L +M GP+L TYN L+ K V + +++ + PD
Sbjct: 771 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 830
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
T +L+ G C++ ++ +I G +N L+ +++ A L + M
Sbjct: 831 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
G+ T + ++ L +N R + + + ++ K+G
Sbjct: 891 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 218/509 (42%), Gaps = 71/509 (13%)
Query: 255 LATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L + LF M P P + +N L+S + KL K + + + + + D +T+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
+I C +++ A I +M G+ P + SL++ + +VS+A L +KM + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
K YN +I L K R A+ F ++++KG + +TY
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY----------------- 228
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
T+L+ G+ RW RL+ + + + P V+ + A ++A
Sbjct: 229 ------------------TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 491 IKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
+KN + +K F E++ + S D ++ ++ + I + L +D+
Sbjct: 271 VKN--------GKVLEAKELFEEMVRM---SIDPDIVTYSSLI-----NGLCLHDRIDE- 313
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
A+Q+F + KG + D+ NT ++ F ++ KLF ++
Sbjct: 314 ---------ANQMF-----DLMVSKGCLA-DVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
G+ + TYN+++ F + G ++A ++M DI TYN+++ GL G +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 671 ASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
A I + + K+ LDIV Y T+I + K G+++E F + G+ PD+VTY T++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 731 VHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
GLL + M G N T
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 187/447 (41%), Gaps = 37/447 (8%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ FN+LL A+ K K + K M+ G D + +NI I+ F C ++ + S+
Sbjct: 86 VDFNRLLSAIVKLK-KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 144
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M PD T L++ C+ +V DA+ + + + ++PD Y +I CKT
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+++ A F ++ G RP + Y +L++ L +++ S+A +L M ++ + + TY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
L+ +KNG+ A LF ++ + D +TYS ++ +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G + D+V+ +L+ G K R + +L + + + LV + + ++ + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ---AGDV 381
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
D + F S+ DF I D W+ + + L +
Sbjct: 382 DKAQEFFSQMDFFGI----------------------SPDIWTYNILLGGLCDN------ 413
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
+L QK DI T + GK+ A LF + G+ P T
Sbjct: 414 -GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEK 646
Y ++MS KG +E A+ T+M ++
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A +L + + P TY++++ +FVK G EA + EM DI TY+ +I
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL R D A+ + D ++ +G D+V YNTLIN KA R+++ K F +M G+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
+ VTYNTLI+ +AG + A +F M G +P+ T L LG D +KA +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL--LGGLCDNGELEKALV 421
Query: 781 LNE 783
+ E
Sbjct: 422 IFE 424
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+ + ++ F + ++S A L + E G P YN+I+ S K N+A+ E+
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 645 EKLCPADIATYNMIIQGLGKIGR-ADLA------------------SAILDRLLKQGGYL 685
K ++ TY ++ GL R +D A SA+LD +K G L
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 686 ----------------DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
DIV Y++LIN L RIDE N+ F+ M S G DVV+YNTLI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
KA ++D K + M G N VT TL
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ L F+ GK+ A +LFE +DP TY+S+++ +EA + M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K C AD+ +YN +I G K R + + + ++G + V YNTLI +AG +D+
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+FF QM GI+PD+ TYN L+ G L+ A + M + VT TT+
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 142/340 (41%), Gaps = 28/340 (8%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
AY+ I+ SL + I++ + + ++ L++ L S + + ++L
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS-- 249
Query: 141 QQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSN 198
+++ TP + Y++LL A ++N + A +F +++ + +
Sbjct: 250 ---DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM----------------S 290
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATS 258
+ + + ++ L+ L D E Q+F LM KG D YN I+ F +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFD-LMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 259 FSLFHQMPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
LF +M L TYN LI + G V A + ++ PD +TY L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C +++ A IF M + Y +++ + K KV EA LF ++ +G+K
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
TY ++ GL G L+ +K++G + T S
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 32/447 (7%)
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+ K++ A +F+ M + P + +N LL + K K L +KM G++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
T+NI+I+ + A ++ + K G D +T +V
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS 496
G+ D+V +++ + K R + K + + P V+ + A + + S
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS--S 239
Query: 497 KKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKS 556
+ D + + +++T S A LD+ + E E L M +++
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYS--ALLDAFVKNGKVLEAKE--LFEEMVRMSIDPDI 295
Query: 557 SGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
Y+S + R ID N + ++KG L+ D V
Sbjct: 296 VTYSSLINGLCLHDR----------IDEANQMFDLMVSKGCLA--------------DVV 331
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
SY N++++ F K + + EM ++ ++ TYN +IQG + G D A
Sbjct: 332 SY--NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
++ G DI YN L+ L G +++ FE M+ ++ D+VTY T+I K G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+++A+ + G P+ VT TT+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTM 476
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 220/502 (43%), Gaps = 17/502 (3%)
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
+CL+ ++ + G + ++ D + + LI+ + K+ A F + +
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
GF N+L+ L + V A +++++++ GV + T NI+++ L K+G+ E
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 394 AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMV 453
T +++KG + D +TY+ ++ +GF + T +++
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 454 GIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG-MEASIK-NPPSKKKDYSPM-----FP 506
G+ KHG+++ + + L P +++ MEA K + +K +S M P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
FS +MS+ T S NLD + E L P D + + GY +
Sbjct: 374 DLVCFSSMMSLFTRS--GNLDKALMYFNSVK--EAGLIP--DNVIYTILIQGYCRKGMIS 427
Query: 567 TP---GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
+ Q+G + D+ NT L + L A KLF TE + P SYT +
Sbjct: 428 VAMNLRNEMLQQGC-AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 624 MSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGG 683
+ K G A + +M EK D+ TYN ++ G GK+G D A I ++ +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 684 YLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
+ Y+ L+NAL G + E + +++M S I P V+ N++I+ + ++G D
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 744 FLKMMLDAGCTPNHVTDTTLDY 765
FL+ M+ G P+ ++ TL Y
Sbjct: 607 FLEKMISEGFVPDCISYNTLIY 628
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 218/510 (42%), Gaps = 27/510 (5%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D C N LI L ++G V+ A V+++++ + +T ++ CK K++
Sbjct: 201 DAC--NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+Q+ G P + YN+L+ + EA +L M +G TYN +I+GL K+
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G+ E A +F ++ + G D TY ++++ R V DLV
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI-KNPPSKKKDYSPMFPS 507
+S+M + G D V+E L+P + + ++ K S +
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 508 KG---DFSEIMSILTGSQDANLDSHDTKIEDEEG------DEWSLSPHMD---KLANQVK 555
+G D +IL G + K+ +E D ++L+ +D KL N
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 556 SSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
A +LF +R++ D+ NT L F G + A +++ + P
Sbjct: 499 ----AMELFQKMKEKRIR------LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
+Y+ ++++ KG+ EA+ + EM K + N +I+G + G A + L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS--SGINPDVVTYNTLIEVHS 733
++++ +G D + YNTLI + + + ++M+ G+ PDV TYN+++
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ +K+A L+ M++ G P+ T T +
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 150/351 (42%), Gaps = 28/351 (7%)
Query: 75 SPLSP--SAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHE 132
S LSP + Y +L + ++ VV F+ ++ S N +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 133 TLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXX 192
L + +++ L+ +IY L+ R I +A ++ ++++
Sbjct: 394 ALMYFNSVKEAGLIPDN---VIYTILIQGYCRKGMISVAMNLRNEMLQ----------QG 440
Query: 193 AALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW 252
A+D + +N +L L K M E ++F+++ ++ F D++ I I
Sbjct: 441 CAMDV------VTYNTILHGLCKRKMLGEADKLFNEMTERALFP-DSYTLTILIDGHCKL 493
Query: 253 GDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G+L + LF +M D+ TYN L+ K+G + A +W D+ + P +Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ L+ C + A R++++M + +P ++ NS++ ++ S+ EKM
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK--GQFVDGITYSIIV 417
EG C +YN LI+G ++ A+ L ++++ G D TY+ I+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
++F K+ +K+ LD YN + FG GD+ T+ ++ M P +Y+ L++
Sbjct: 501 ELFQKMKEKR-IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
LC G + +A VW+++ + +P ++I+G C++ +M + GF P
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQE--GVKASCQTYNILIHGLIKNGRPEAAYTL 397
I YN+L+ + +S+A L +KM +E G+ TYN ++HG + + + A +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 398 FCDLKKKGQFVDGITYSIIV 417
+ ++G D TY+ ++
Sbjct: 680 LRKMIERGVNPDRSTYTCMI 699
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+N ++ L K ++VF +++ + G + D+ Y + GD+ + +F
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEML-RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M PDL ++ ++S+ + G + AL+ + + PD+ YT LIQG C+
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I A + N+M G + YN++L L K + EA +LF +M + + T I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
LI G K G + A LF +K+K +D +TY+ ++
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 543 LSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLAC 602
LS L ++ SG + + GS+ D++ + ++ KL A
Sbjct: 129 LSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL---IRTYVQARKLREAH 185
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+ F + G N+++ S V+ G+ AW + E+ ++ T N+++ L
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K G+ + L ++ ++G Y DIV YNTLI+A G ++E + M G +P V
Sbjct: 246 CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TYNT+I K G + A + ML +G +P+ T +L
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 177/450 (39%), Gaps = 70/450 (15%)
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
V++ L+ +A K+ EA + F + +G S N LI L++ G E A+ ++ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 402 KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+ G +++ T+ ++ + K G+
Sbjct: 227 SRS-----------------------------------GVGINVYTLNIMVNALCKDGKM 251
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
+ + V+E + P ++ + + A + SKG E ++
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISA---------------YSSKGLMEEAFELMNAM 296
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFD 581
++ + ++ L K A ++F + S D
Sbjct: 297 PGKGFSP----------GVYTYNTVINGLCKHGKYE-RAKEVFAE------MLRSGLSPD 339
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+ L KG + K+F V P ++S+MS F + G ++A
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+ E D Y ++IQG + G +A + + +L+QG +D+V YNT+++ L K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-D 760
+ E +K F +M + PD T LI+ H K G L++A + + M + + VT +
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 761 TTLDYLGR--EIDKLRYQKASILNEKDDPS 788
T LD G+ +ID + A +++++ P+
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 195 LDSNSNSNSIAFNQLLV-ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
L S + +S + LL+ A +K D+ +E ++VF M + D ++ + F G
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDV-VETEKVFSD-MRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 254 DLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+L + F+ + PD Y LI C+ G + A+ + ++ D TY
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
T++ G CK + A ++FN+M P + L+D K + A +LF+KM ++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++ TYN L+ G K G + A ++ D+ K I+YSI+V
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 31/351 (8%)
Query: 63 LHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLH 122
L +FN + P Y+++++ R + Q + ++N +LH
Sbjct: 395 LMYFNSVKEAGLIP-DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPG--CTPLIYNSLLIASLRNNHIPLAFSIFLKLIE 180
L E ++ + + +R L T LI + +L+N A +F K+ E
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN-----AMELFQKMKE 508
Query: 181 LFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTW 240
LD + +N LL K ++++ ++ K+
Sbjct: 509 ----------KRIRLDV------VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI- 551
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDL 296
Y+I ++A G LA +F ++ +M P + N +I C+ G D E +
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN--GFRPGTIVYNSLLDVLFKAT 354
+ PD +Y TLI G + + A + +M G P YNS+L +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
++ EA + KM + GV TY +I+G + A+ + ++ ++G
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG------PDLCTYNCLI 277
+ F + M +GF D YN I+ F +++ +F L +M PD+ TYN ++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 278 SVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR 337
C+ ++K+A +V + PD TYT +I G + A RI ++M GF
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 338 P 338
P
Sbjct: 725 P 725
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 222/512 (43%), Gaps = 40/512 (7%)
Query: 258 SFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWE--DLNACAHQPDHFTYTTL 311
+ +LF +M P P L ++ S + + + L + +LN AH + +T +
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH--NIYTLNIM 129
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
I C+ K A + ++ G+ P T +N+L+ LF KVSEA L ++M + G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
+ TYN +++G+ ++G A L ++++ D TYS I+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
+G +VT SL+ G+ K G+W+ L+K + ++VP V+ + ++ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
K K ++ + ++ ++T N+ +++T + D + + + +
Sbjct: 310 K--EGKLQEANELYK---------EMITRGISPNIITYNTLM-----DGYCMQNRLSEAN 353
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
N + + + S DI + + + ++ K+F ++
Sbjct: 354 NMLD----------------LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G+ + TY+ ++ F + G A + EM D+ TY +++ GL G+ + A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
I + L K L IVMY T+I + K G++++ F + G+ P+V+TY +I
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K G L +A L+ M + G PN T TL
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 200/470 (42%), Gaps = 17/470 (3%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
T N +I+ C+ K A V + ++PD T+ TLI+G K+ A + ++M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
NG +P + YNS+++ + ++ S A L KM + VKA TY+ +I L ++G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+AA +LF +++ KG +TY+ +V R V +++T L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA-SIKNPPSKKKDYSPMFPSKG- 509
+ K G+ + L K + + P ++ + M+ ++N S+ + +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 510 --DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS----GYASQL 563
D S++ G +++D ++S +AN V S G+
Sbjct: 365 SPDIVTFTSLIKGY------CMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSG 417
Query: 564 FTPTPGQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
+ Q+ S D+ L GKL A ++FE ++ +D Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
+I+ K G +AW + + K ++ TY ++I GL K G A+ +L ++ +
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
G + YNTLI A + G + K E+MKS G + D + +I++
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 189/451 (41%), Gaps = 20/451 (4%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
V K+M K G+ DT +N I G ++ + L +M PD+ TYN +++ +
Sbjct: 145 VLGKVM-KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
C+ G AL + + + D FTY+T+I C+ ID A +F +M G +
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+ YNSL+ L KA K ++ L + M + + T+N+L+ +K G+ + A L+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
+ +G + ITY+ ++ D+VT TSL+ G R
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK-KKDYSPMFPSKGDFSEIMS--- 516
D ++ +++ + LV + + ++ ++ K ++ S G ++M+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 517 ILTGSQD-ANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY----ASQLFTPTPGQR 571
+L G D L+ ED + + L M + G A LF P +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
V+ ++ +S KG LS A L E G P TYN+++ + ++ G
Sbjct: 504 VKP------NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+ +I EM AD ++ M+I L
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N I FN LL K + KL+ +K M +G + + YN + + L+ + ++
Sbjct: 297 NVITFNVLLDVFVK-EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
M PD+ T+ LI C + +V D + V+ +++ + TY+ L+QG C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ KI A +F +M ++G P + Y LLD L K+ +A ++FE + + +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y +I G+ K G+ E A+ LFC L KG + +TY++++
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+I +N ++ F K A + + G +P + T+N+++ +G +EA ++
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M E C D+ TYN I+ G+ + G LA +L ++ ++ D+ Y+T+I++L +
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT- 759
G ID F++M++ GI VVTYN+L+ KAG D LK M+ PN +T
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 760 DTTLDYLGRE 769
+ LD +E
Sbjct: 302 NVLLDVFVKE 311
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN L+ L + E + ++D +++ GC P + YNS++ R+ LA
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVD-----RMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ K+ E N ++ ++ ++ +L + D ++ K M+ K
Sbjct: 215 LLRKMEE----------------RNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETK 257
Query: 234 GFALDTWGYNICIHAF---GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G YN + G W D A + + P++ T+N L+ V K GK+++A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+++++ P+ TY TL+ G C ++ A + + M N P + + SL+
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
+V + ++F +++ G+ A+ TY+IL+ G ++G+ + A LF ++ G D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 410 GITYSIIV 417
+TY I++
Sbjct: 438 VMTYGILL 445
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+VF + K+G + Y+I + F G + + LF +M PD+ TY L+
Sbjct: 389 KVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
LC GK++ AL ++EDL YTT+I+G CK K++ A +F + G +P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
+ Y ++ L K +SEA L KM ++G + TYN LI +++G A+ L
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 400 DLKKKGQFVDGITYSIIV 417
++K G D + +++
Sbjct: 568 EMKSCGFSADASSIKMVI 585
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISV 279
++F L K L Y I G + +++LF +P P++ TY +IS
Sbjct: 459 EIFEDLQKSK-MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
LCK G + +A I+ + + P+ TY TLI+ + + + ++ +M + GF
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 340 TIVYNSLLDVLFKATK 355
++D+L A K
Sbjct: 578 ASSIKMVIDMLLSAMK 593
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 141/571 (24%), Positives = 248/571 (43%), Gaps = 29/571 (5%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + L+ AL + E + + +L D+ GF D Y+ IH + G L +
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDE-GFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M D+ +Y+ LI L K G V++AL + + +P+ TYT +I+G CK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ A +FN++ + G +Y +L+D + + ++ A + M Q G++ S T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN +I+GL GR A D KG D ITYS ++
Sbjct: 385 YNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
+DLV L+ G + D L + + E DL P + ++ K +
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKT--GQ 497
Query: 498 KKDYSPMF--------PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
++ MF + ++ I+ L + LD+ + + L H +
Sbjct: 498 IEEALEMFNELRKSSVSAAVCYNRIIDALC--KKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 550 -LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 608
L + + ++G + G ++Q SD + M+N + + +G A +++ I
Sbjct: 556 TLLHSIHANGGDKGILGLVYG--LEQLNSDVC-LGMLNDAILLLCKRGSFEAAIEVYMIM 612
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMIIQGLGKIGR 667
G+ V++ ++I+ + V +A+ ++ GE L D+ Y +II GL K G
Sbjct: 613 RRKGL-TVTFP-STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGF 670
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
A + +G L+ + YN+LIN L + G + E + F+ +++ G+ P VTY
Sbjct: 671 LVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 730
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
LI+ K GL DA K L M+ G PN +
Sbjct: 731 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 131/601 (21%), Positives = 228/601 (37%), Gaps = 92/601 (15%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M +KG D Y+I I G++ + L +M P+L TY +I LCK+GK
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG------ 339
+++A +++ + + + D F Y TLI G C+ ++ A + M G +P
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 340 ------------------------TIVYNSLLDVLFKATKV------------------- 356
I Y++LLD K +
Sbjct: 388 VINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 357 ----------------SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
EA L+ M + + TY +I G K G+ E A +F +
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
L+K + Y+ I+ +G +D+ T +L+ IH +G
Sbjct: 508 LRKS-SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 461 WDWT-------DRLMKHVREGDLVPKVLRW--KAGMEASIK-NPPSKKKDYSPMFPSKGD 510
++L V G L +L + EA+I+ ++K + FPS
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS--- 623
Query: 511 FSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ 570
+IL D NL S D + E +LS MD + + +G + F
Sbjct: 624 -----TILKTLVD-NLRSLDAYLLVVNAGETTLSS-MDVIDYTIIINGLCKEGFLVKALN 676
Query: 571 RVQQKGSDSFDIDMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
S ++ + N+ ++ +G L A +LF+ G+ P TY ++ +
Sbjct: 677 LCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLC 736
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
K+G F +A ++ M K +I YN I+ G K+G+ + A ++ R + D
Sbjct: 737 KEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF 796
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+++I K G ++E F + K I+ D + LI+ G +++A L+ M
Sbjct: 797 TVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Query: 749 L 749
L
Sbjct: 857 L 857
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 210/517 (40%), Gaps = 24/517 (4%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDL-NACAHQP-DHFTYTTLIQGCCKTYKIDHAT 325
P T+ LI + G++ +A+ V E + N + P D+F + +I G CK K + A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 326 RIFNQMHNNG-FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG 384
F ++G P + Y +L+ L + KV E L ++ EG + C Y+ IHG
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD 444
K G A ++ +KG D ++YSI++ G +
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 445 LVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPM 504
L+T T+++ G+ K G+ + L + + + + ++ + +K + +
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRI-----LSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 505 FPSKGDFSEIM---SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY-- 559
F GD + SILT + N ++ E DE S D + Y
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRV--SEADEVSKGVVGDVITYSTLLDSYIK 424
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
+ +R + D+ M N L FL G A L+ E + P + T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y +++ + K G EA + E+ + A + YN II L K G D A+ +L L
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIELW 543
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV--TYNTLIEVHSKAGL 737
++G YLDI TL++++ G + ++ +N DV N I + K G
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ--LNSDVCLGMLNDAILLLCKRGS 601
Query: 738 LKDAYKFLKMMLDAGCT---PNHVTDTTLDYLGREID 771
+ A + +M G T P+ + T +D L R +D
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL-RSLD 637
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC--PADIATYNMIIQGLGKIGRAD 669
G P S T+ S++ FV+KG + A ++ M K P D + +I G KIG+ +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 670 LASAILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKF--------FE--------- 711
LA + + G + ++V Y TL++AL + G++DEV FE
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 712 ------------------QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
+M G+N DVV+Y+ LI+ SK G +++A L M+ G
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 754 TPNHVTDTTL 763
PN +T T +
Sbjct: 309 EPNLITYTAI 318
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
T + +D + YT I++ K+G+ +A + + + + TYN +I GL + G
Sbjct: 649 TLSSMDVIDYTI--IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A + D L G V Y LI+ L K G + K + M S G+ P+++ YN++
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++ + K G +DA + + + TP+ T +++
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 137/372 (36%), Gaps = 89/372 (23%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L +S S ++ +N+++ AL K M +V +L +K G LD +H+ G
Sbjct: 508 LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEK-GLYLDIHTSRTLLHSIHANGG 566
Query: 255 LATSFSLFHQMP--GPDLC--TYNCLISVLCKLGKVKDALIVW----------------- 293
L + + D+C N I +LCK G + A+ V+
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTIL 626
Query: 294 -------EDLNA----------CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
L+A D YT +I G CK + A + + + G
Sbjct: 627 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT 396
TI YNSL++ L + + EA +LF+ + G+ S TY ILI L K G
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEG------- 739
Query: 397 LFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIH 456
LF D +K +D + +G V +++ S++ G
Sbjct: 740 LFLDAEK---LLDSMV-------------------------SKGLVPNIIIYNSIVDGYC 771
Query: 457 KHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMS 516
K G+ + R++ G + P + ++ K KGD E +S
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK---------------KGDMEEALS 816
Query: 517 ILTGSQDANLDS 528
+ T +D N+ +
Sbjct: 817 VFTEFKDKNISA 828
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 202/493 (40%), Gaps = 49/493 (9%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+L TY+ I+ C+ ++ AL + + + P T +L+ G C +I A +
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+QM G++P T+ + +L+ LF+ K SEA L E+M +G + TY +I+GL K
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G P+ A L ++K D + Y+ I+ +G D+ T
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP--SKKKDYSPMFP 506
L+ + +GRW RL+ + E ++ P ++ + A ++A +K +K Y M
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIED-------EEGDEWSLSPHMDKLANQVKSSGY 559
SK F ++++ ++T I+ EEG E + ++ G
Sbjct: 349 SKHCFPDVVA------------YNTLIKGFCKYKRVEEGME---------VFREMSQRGL 387
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
T T T + F A +F+ GV P T
Sbjct: 388 VGNTVTYT-------------------TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
YN ++ G A + M ++ DI TY +I+ L K G+ + + L
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+G ++V Y T+++ + G +E + F +MK G P+ TYNTLI + G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 740 DAYKFLKMMLDAG 752
+ + +K M G
Sbjct: 549 ASAELIKEMRSCG 561
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 210/517 (40%), Gaps = 74/517 (14%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A G +GD+ S P P + ++ L+S + K+ K + + E + + +T
Sbjct: 59 AIGLFGDMVKS------RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y+ I C+ ++ A I +M G+ P + NSLL+ ++SEA L ++M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G + T+ L+HGL ++ + A L
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALV----------------------------- 203
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
+G DLVT +++ G+ K G D L+ + +G + V+ + +
Sbjct: 204 ------ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
+ K Y M + F+++ + + + D ++ +P +
Sbjct: 258 DGLCK--------YKHMDDAFDLFNKM-----------------ETKGIKPDVFTYNPLI 292
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-E 606
L N + S AS+L + + + D+ N + F+ +GKL A KL+ E
Sbjct: 293 SCLCNYGRWSD-ASRLLSDMLEKNINP------DLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
+ P YN+++ F K E + EM ++ + TY +I G +
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
D A + +++ G + DI+ YN L++ L G ++ FE M+ + D+VTY
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 727 TLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
T+IE KAG ++D + + G PN VT TT+
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+A+N L+ K E +VF + M ++G +T Y IH F D + +F
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFRE-MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
QM PD+ TYN L+ LC G V+ AL+V+E + + D TYTT+I+ CK
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K++ +F + G +P + Y +++ + EA LF +M ++G + TYN
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
LI +++G A+ L +++ G D T+ ++
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLG 284
M +K D +N I AF G L + L+ +M PD+ YN LI CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+V++ + V+ +++ + TYTTLI G + D+A +F QM ++G P + YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
LLD L V A +FE M + +K TY +I L K G+ E + LFC L K
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 405 GQFVDGITYSIIV 417
G + +TY+ ++
Sbjct: 491 GVKPNVVTYTTMM 503
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 171/445 (38%), Gaps = 38/445 (8%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGK 285
M + G+ DT + +H + + +L +M PDL TY +I+ LCK G+
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
AL + + + D Y T+I G CK +D A +FN+M G +P YN
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL-KKK 404
L+ L + S+A +L M ++ + +N LI +K G+ A L+ ++ K K
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 405 GQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWT 464
F D + Y+ ++ RG V + VT T+L+ G + D
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 465 DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
+ K + + P ++ + ++ N + + K D + I+T +
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK--LDIVTYTTMI 468
Query: 525 NLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDM 584
K+E D W L + G + T T
Sbjct: 469 EALCKAGKVE----DGWDLFCSL-------SLKGVKPNVVTYT----------------- 500
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
T +S F KG A LF E G P S TYN+++ + ++ G + +I EM
Sbjct: 501 --TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 645 EKLCPADIATYNMIIQGLGKIGRAD 669
D +T+ ++ L GR D
Sbjct: 559 SCGFAGDASTFGLVTNMLHD-GRLD 582
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L+ N N + + FN L+ A K +E ++++ +++ K D YN I F +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 255 LATSFSLFHQMPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ +F +M L TY LI + +A +V++ + + PD TY
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
L+ G C ++ A +F M + + Y ++++ L KA KV + LF ++ +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
VK + TY ++ G + G E A LF ++K+ G + TY+ ++
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 122/286 (42%), Gaps = 30/286 (10%)
Query: 117 FNPLLHSLIISHNFHETLQILD-YIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
FN L+ + + E ++ D ++ +H C P + YN+L+ + +
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKH-----CFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ + N++ + L+ +A Q VF K M
Sbjct: 378 VFREMSQ----------------RGLVGNTVTYTTLIHGFFQARDCDNAQMVF-KQMVSD 420
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDA 289
G D YNI + G++ T+ +F M D+ TY +I LCK GKV+D
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
++ L+ +P+ TYTT++ G C+ + A +F +M +G P + YN+L+
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+ + + +L ++M G T+ L+ ++ +GR + ++
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/590 (22%), Positives = 240/590 (40%), Gaps = 66/590 (11%)
Query: 207 NQLLVALRKADMKLEFQQVFHKL-MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
N LL +L +A+ EFQ+ + KG + D + + I+AF G + + LF +M
Sbjct: 230 NILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 266 P----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P++ T+N +I L G+ +A + E + +P TY+ L++G + +I
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A + +M GF P IVYN+L+D +A +++A ++ + M +G+ + TYN L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR-- 439
I G KNG+ + A L ++ G V+ +++ ++ R
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 440 ---------------------------------GFVVDLVTITSLMVGIHKHGRWDWTDR 466
GFVVD T +L+ G+ + G+ D R
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 467 LMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF----------PSKGDFSEIMS 516
+ K + V + + + KK D + MF P +S ++
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCC---GKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 517 IL---TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ 573
L ++A D K D ++ S +D + + + + F + VQ
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC-KAERTEEGQEFFDEMMSKNVQ 642
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+ + N + + G+LS+A +L E G+ P S TY S++
Sbjct: 643 P------NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
EA + EM + ++ Y +I G GK+G+ +L + + + + + Y +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
I + G + E ++ +M+ GI PD +TY I + K G + +A+K
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 212/522 (40%), Gaps = 29/522 (5%)
Query: 258 SFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+F + + PD+ + I+ CK GKV++A+ ++ + P+ T+ T+I G
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ D A +M G P I Y+ L+ L +A ++ +A + ++M ++G +
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN LI I+ G A + + KG + TY+ ++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
GF V+ + TS++ + H +D R + G+++ + + G+ ++ + K
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFV-----GEMLLRNMSPGGGLLTTLISGLCK 482
Query: 498 KKDYSP------MFPSKG---DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMD 548
+S F +KG D ++L G +A +I+ E + MD
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV---MD 539
Query: 549 KLANQVKSSGYASQ-------LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
+++ SG + +F +R + + ++ I + F K+ A
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-----NMNKVEEA 594
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
+ ++ G+ P YTY+ ++ K E EM K + YN +I+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
+ GR +A + + + +G + Y +LI + R++E FE+M+ G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
V Y LI+ + K G + L+ M PN +T T +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 191/467 (40%), Gaps = 31/467 (6%)
Query: 311 LIQGCCKTYKIDH---ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
LI+ C +K D A +F + N G P N LL L +A + + C+ F+ +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ GV + I+ K G+ E A LF +++ G + +T++ ++
Sbjct: 254 K-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
RG L+T + L+ G+ + R ++K + + P V+ + +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 488 EASIK-NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
++ I+ +K + + SKG +S+ + + + + + + + + L
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKG-----LSLTSSTYNTLIKGYCKNGQADNAER--LLKE 425
Query: 547 MDKLANQVKSSGYASQL--------------FTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
M + V + S + F R G ++ T +S
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG-----LLTTLISGL 480
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
GK S A +L+ F G + T N+++ + G +EA+ I E+ + C D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+YN +I G + D A LD ++K+G D Y+ LI L +++E +F++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
K +G+ PDV TY+ +I+ KA ++ +F M+ PN V
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 32/413 (7%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
YS++++ L+R + + + +N L+ S I + + ++ ++I D +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 141 QQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSN 200
+ L T YN+L+ +N A + +++ + N
Sbjct: 392 VSKGL---SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI----------------GFN 432
Query: 201 SNSIAFNQ---LLVALRKADMKLEF-QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
N +F LL + D L F ++ + M G L T +C H G +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH-----GKHS 487
Query: 257 TSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+ L+ Q D T N L+ LC+ GK+ +A + +++ D +Y TLI
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
GCC K+D A ++M G +P Y+ L+ LF KV EA Q ++ + G+
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
TY+++I G K R E F ++ K + + Y+ ++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
+G + T TSL+ G+ R + L + +R L P V + A
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L+ + + C+ F++ + GV P Y + + +++F K G EA + ++M E
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
++ T+N +I GLG GR D A ++++++G ++ Y+ L+ L +A RI +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++M G P+V+ YN LI+ +AG L A + +M+ G + T TL
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+ F+ V P + YN ++ ++ + G + A + +M K + ATY +I+G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
I R + A + + + +G ++ Y LI+ GK G++ +V +M S ++P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+TY +I +++ G + +A + L M + G P+ +T
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Query: 195 LDSNSNSNSIAFNQLLVALRKA---DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGC 251
+ N N++ +N L+ A ++ M LE ++ M KG + ++ Y I
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED----MKHKGISPNSATYTSLIKGMSI 692
Query: 252 WGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
+ + LF +M P++ Y LI KLG++ + ++++ P+ T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
YT +I G + + A+R+ N+M G P +I Y + K V EA F+
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---FKGSD 809
Query: 368 QEGVKASCQTYNILIH 383
+E A + +N LI
Sbjct: 810 EENYAAIIEGWNKLIQ 825
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/590 (22%), Positives = 240/590 (40%), Gaps = 66/590 (11%)
Query: 207 NQLLVALRKADMKLEFQQVFHKL-MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
N LL +L +A+ EFQ+ + KG + D + + I+AF G + + LF +M
Sbjct: 230 NILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 266 P----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P++ T+N +I L G+ +A + E + +P TY+ L++G + +I
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A + +M GF P IVYN+L+D +A +++A ++ + M +G+ + TYN L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR-- 439
I G KNG+ + A L ++ G V+ +++ ++ R
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 440 ---------------------------------GFVVDLVTITSLMVGIHKHGRWDWTDR 466
GFVVD T +L+ G+ + G+ D R
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 467 LMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF----------PSKGDFSEIMS 516
+ K + V + + + KK D + MF P +S ++
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCC---GKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 517 IL---TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ 573
L ++A D K D ++ S +D + + + + F + VQ
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC-KAERTEEGQEFFDEMMSKNVQ 642
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+ + N + + G+LS+A +L E G+ P S TY S++
Sbjct: 643 P------NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
EA + EM + ++ Y +I G GK+G+ +L + + + + + Y +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
I + G + E ++ +M+ GI PD +TY I + K G + +A+K
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 212/522 (40%), Gaps = 29/522 (5%)
Query: 258 SFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+F + + PD+ + I+ CK GKV++A+ ++ + P+ T+ T+I G
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ D A +M G P I Y+ L+ L +A ++ +A + ++M ++G +
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN LI I+ G A + + KG + TY+ ++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
GF V+ + TS++ + H +D R + G+++ + + G+ ++ + K
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFV-----GEMLLRNMSPGGGLLTTLISGLCK 482
Query: 498 KKDYSP------MFPSKG---DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMD 548
+S F +KG D ++L G +A +I+ E + MD
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV---MD 539
Query: 549 KLANQVKSSGYASQ-------LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
+++ SG + +F +R + + ++ I + F K+ A
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-----NMNKVEEA 594
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
+ ++ G+ P YTY+ ++ K E EM K + YN +I+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
+ GR +A + + + +G + Y +LI + R++E FE+M+ G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
V Y LI+ + K G + L+ M PN +T T +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 191/467 (40%), Gaps = 31/467 (6%)
Query: 311 LIQGCCKTYKIDH---ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
LI+ C +K D A +F + N G P N LL L +A + + C+ F+ +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ GV + I+ K G+ E A LF +++ G + +T++ ++
Sbjct: 254 K-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
RG L+T + L+ G+ + R ++K + + P V+ + +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 488 EASIK-NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
++ I+ +K + + SKG +S+ + + + + + + + + L
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKG-----LSLTSSTYNTLIKGYCKNGQADNAER--LLKE 425
Query: 547 MDKLANQVKSSGYASQL--------------FTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
M + V + S + F R G ++ T +S
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG-----LLTTLISGL 480
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
GK S A +L+ F G + T N+++ + G +EA+ I E+ + C D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+YN +I G + D A LD ++K+G D Y+ LI L +++E +F++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
K +G+ PDV TY+ +I+ KA ++ +F M+ PN V
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 32/413 (7%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
YS++++ L+R + + + +N L+ S I + + ++ ++I D +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 141 QQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSN 200
+ L T YN+L+ +N A + +++ + N
Sbjct: 392 VSKGL---SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI----------------GFN 432
Query: 201 SNSIAFNQ---LLVALRKADMKLEF-QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
N +F LL + D L F ++ + M G L T +C H G +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH-----GKHS 487
Query: 257 TSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+ L+ Q D T N L+ LC+ GK+ +A + +++ D +Y TLI
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
GCC K+D A ++M G +P Y+ L+ LF KV EA Q ++ + G+
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
TY+++I G K R E F ++ K + + Y+ ++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
+G + T TSL+ G+ R + L + +R L P V + A
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L+ + + C+ F++ + GV P Y + + +++F K G EA + ++M E
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
++ T+N +I GLG GR D A ++++++G ++ Y+ L+ L +A RI +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++M G P+V+ YN LI+ +AG L A + +M+ G + T TL
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+ F+ V P + YN ++ ++ + G + A + +M K + ATY +I+G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
I R + A + + + +G ++ Y LI+ GK G++ +V +M S ++P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+TY +I +++ G + +A + L M + G P+ +T
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Query: 195 LDSNSNSNSIAFNQLLVALRKA---DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGC 251
+ N N++ +N L+ A ++ M LE ++ M KG + ++ Y I
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED----MKHKGISPNSATYTSLIKGMSI 692
Query: 252 WGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
+ + LF +M P++ Y LI KLG++ + ++++ P+ T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
YT +I G + + A+R+ N+M G P +I Y + K V EA F+
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---FKGSD 809
Query: 368 QEGVKASCQTYNILIH 383
+E A + +N LI
Sbjct: 810 EENYAAIIEGWNKLIQ 825
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 209/485 (43%), Gaps = 55/485 (11%)
Query: 294 EDLNACAH-------QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
EDL C + + FTY L+Q ++ A ++ ++ G + YN L
Sbjct: 185 EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNML 244
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
LD L K K ACQ+FE M + + TY I+I + + G+ + A LF ++ +G
Sbjct: 245 LDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 407 FVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD-LVTITSLMVGIH-KHGRWDWT 464
++ + Y+ ++ +G +VD + + S MV + + ++
Sbjct: 302 TLNVVGYNTLM-----------------QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS 344
Query: 465 DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
L V EG LV R +E S + + ++G +S ++ L+
Sbjct: 345 LLLNLLVAEGQLV----RLDGVVEISKR------------YMTQGIYSYLVRTLSKL--- 385
Query: 525 NLDSHDTKIEDEEGDEWS--LSPHMDKLANQVKS-SGYASQLFTPTPGQRVQQKGSDSFD 581
H ++ D WS + D + ++S G + ++ +KG + D
Sbjct: 386 ---GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT-D 441
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
M NT S ++S LFE + G P +TYN +++SF + G +EA I
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
E+ C DI +YN +I LGK G D A + ++G D+V Y+TL+ GK
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
R++ FE+M G P++VTYN L++ K G +A M G TP+ +T T
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Query: 762 TLDYL 766
L+ L
Sbjct: 622 VLERL 626
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 218/542 (40%), Gaps = 49/542 (9%)
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLA 256
S ++ +N++++ L ++++ F +V L M K + NI I FG DL
Sbjct: 129 SQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQ 188
Query: 257 TSFSLFHQMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
L + + TY CL+ + A V+ ++ H+ D F Y L+
Sbjct: 189 MCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K K A ++F M R Y ++ + + K EA LF +M EG+ +
Sbjct: 249 AKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNV 305
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXX 435
YN L+ L K + A +F + + G + TYS+++
Sbjct: 306 VGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL----------------NL 349
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMK---HVREGDLVPKVLRWKAGMEASIK 492
G +V L + + G + + R + HV E R M +
Sbjct: 350 LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAH------RLFCDMWS--- 400
Query: 493 NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLAN 552
FP KG+ MS+L A ++ + ++ ++ M + N
Sbjct: 401 ------------FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM--MYN 446
Query: 553 QVKSS-GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
V S+ G Q+ +K S DI N ++ F G++ A +FE +
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
P +YNS+++ K G +EA EM EK D+ TY+ +++ GK R ++A
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
++ + +L +G +IV YN L++ L K GR E + +MK G+ PD +TY L +
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Query: 732 HS 733
S
Sbjct: 627 QS 628
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 586 NTFLSIFLAKGKL-SLACKLFEIFTEAGVDPVSYTYNSIMSSFV---------------- 628
NT + + LAKGK+ A ++F E G P YTY+ +++ V
Sbjct: 309 NTLMQV-LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 629 ----------------KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
K G+ +EA + +M + +Y +++ L G+ A
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+L ++ ++G D +MYNT+ +ALGK +I ++ FE+MK G +PD+ TYN LI
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREID 771
+ G + +A + + + C P+ ++ ++ ++ LG+ D
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 152 PLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLV 211
P +YN +++ R+N +P F +++ + + SN + N N L+
Sbjct: 133 PFLYNRIILILSRSN-LPDRFDRVRSILD------------SMVKSNVHGNISTVNILIG 179
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP--- 268
E Q+ +L+ K ++++ Y + A+ D + +F ++ ++
Sbjct: 180 FFGNT----EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHK 235
Query: 269 -DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
D+ YN L+ L K K A V+ED+ + D +TYT +I+ + K D A +
Sbjct: 236 LDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGL 292
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
FN+M G + YN+L+ VL K V +A Q+F +M + G + + TY++L++ L+
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 388 NGR 390
G+
Sbjct: 353 EGQ 355
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 603 KLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
K F+++ E G + YN ++ + K +A + +M ++ C D TY ++I
Sbjct: 221 KAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMI 277
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
+ +G+IG+ D A + + ++ +G L++V YNTL+ L K +D+ + F +M +G
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKL 773
P+ TY+ L+ + G + +++ + ++T YL R + KL
Sbjct: 338 PNEYTYSLLLNLLVAEG------QLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 230/552 (41%), Gaps = 97/552 (17%)
Query: 265 MPGPDLCTYNCLISVLCKLGK-VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
MPG + +YN ++ + + + A V++++ P+ FTY LI+G C ID
Sbjct: 166 MPG--VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A +F++M G P + YN+L+D K K+ + +L MA +G++ + +YN++I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
GL + GR + + ++ + RG+ +
Sbjct: 284 GLCREGRMKEVSFVLTEMNR-----------------------------------RGYSL 308
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW--------KAG-----ME-- 488
D VT +L+ G K G + + + L P V+ + KAG ME
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 489 --ASIKNPPSKKKDYSPM---FPSKGDFSEIMSILTGSQD-----------ANLDSH--D 530
++ ++ Y+ + F KG +E +L D A ++ H
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 531 TKIED-----EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF---DI 582
K+ED E+ E LSP D ++ SG+ + RV+++ + D
Sbjct: 429 GKMEDAIAVLEDMKEKGLSP--DVVSYSTVLSGFCRS-YDVDEALRVKREMVEKGIKPDT 485
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
++ + F + + AC L+E G+ P +TY ++++++ +G +A + E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN------- 695
M EK D+ TY+++I GL K R A +L +L + V Y+TLI
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 696 --------ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
G + E ++ FE M PD YN +I H +AG ++ AY K
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 748 MLDAGCTPNHVT 759
M+ +G + VT
Sbjct: 666 MVKSGFLLHTVT 677
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 120/611 (19%), Positives = 248/611 (40%), Gaps = 46/611 (7%)
Query: 139 YIQQRHLLQPGCTPLIYNSLLIASLRN-NHIPLAFSIFLKLIELFXXXXXXXXXXAALDS 197
++ Q H PG L YN++L A++R+ +I A ++F +++E S
Sbjct: 158 HLAQAHGFMPGV--LSYNAVLDATIRSKRNISFAENVFKEMLE----------------S 199
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLAT 257
+ N +N L+ A ++ M+ KG + YN I + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAG-NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 258 SFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
F L M P+L +YN +I+ LC+ G++K+ V ++N + D TY TLI+
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G CK A + +M +G P I Y SL+ + KA ++ A + ++M G+
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
+ +TY L+ G + G AY + ++ G +TY+ ++
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
+G D+V+ ++++ G + D R+ + + E + P + + + ++ +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 494 PPSKKKD--YSPMF-----PSKGDFSEIMS--ILTGSQDANLDSHDTKIEDEEG---DEW 541
+K+ Y M P + ++ +++ + G + L H+ + E+G D
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV--EKGVLPDVV 556
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ--------KGSDSFDIDMVNTFLSIFL 593
+ S ++ L Q ++ L + V + + + V + + F
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 594 AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIA 653
KG ++ A ++FE P YN ++ + G +A+ + EM +
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
T +++ L K G+ + ++++ +L+ + L+ + G +D V +M
Sbjct: 677 TVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEM 736
Query: 714 KSSGINPDVVT 724
G P+ ++
Sbjct: 737 AKDGFLPNGIS 747
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 189/446 (42%), Gaps = 37/446 (8%)
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK-VSEACQLFEKMAQEGVKASCQTYN 379
ID A I + +GF PG + YN++LD ++ + +S A +F++M + V + TYN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
ILI G G + A TLF ++ KG + +TY+ ++ +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G +L++ ++ G+ + GR MK V ++ ++ R ++ N K
Sbjct: 270 GLEPNLISYNVVINGLCREGR-------MKEV--SFVLTEMNRRGYSLDEVTYNTLIKG- 319
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+ +G+F + + + A + H + SL M K N ++ +
Sbjct: 320 -----YCKEGNFHQALVM-----HAEMLRHG--LTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 560 ASQLFTP--TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
Q+ P +R D F KG ++ A ++ + G P
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFS------------QKGYMNEAYRVLREMNDNGFSPSV 415
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
TYN++++ G +A A++ +M EK D+ +Y+ ++ G + D A +
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
++++G D + Y++LI + R E +E+M G+ PD TY LI + G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 738 LKDAYKFLKMMLDAGCTPNHVTDTTL 763
L+ A + M++ G P+ VT + L
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVL 561
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 171/414 (41%), Gaps = 63/414 (15%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++N L+ + N L + D ++ + GC P + YN+L+ + I F
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETK-----GCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ + L+ N S ++ N L R+ MK E V + M+++
Sbjct: 262 LLRSM------------ALKGLEPNLISYNVVINGLC---REGRMK-EVSFVLTE-MNRR 304
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
G++LD YN I + G+ + + +M P + TY LI +CK G + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL-- 347
+ + + P+ TYTTL+ G + ++ A R+ +M++NGF P + YN+L+
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 348 ------------------------DVLFKATKVSEACQLFE---------KMAQEGVKAS 374
DV+ +T +S C+ ++ +M ++G+K
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
TY+ LI G + R + A L+ ++ + G D TY+ ++
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
+G + D+VT + L+ G++K R RL+ + + VP + + +E
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 172/447 (38%), Gaps = 46/447 (10%)
Query: 66 FNWCRSHHSSPLSPS--AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHS 123
F RS L P+ +Y++++ L R + + L ++N L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 124 LIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSI------- 174
NFH+ L + +L+ G TP + Y SL+ + + ++ A
Sbjct: 320 YCKEGNFHQAL-----VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 175 --------FLKLIELFXXXXXXXXXXAAL---DSNSNSNSIAFNQLLVALRKADMKLEFQ 223
+ L++ F L + N S S+ L+ K+E
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISV 279
+ M +KG + D Y+ + F D+ + + +M PD TY+ LI
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
C+ + K+A ++E++ PD FTYT LI C ++ A ++ N+M G P
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH---------------G 384
+ Y+ L++ L K ++ EA +L K+ E S TY+ LI G
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD 444
G A +F + K DG Y+I++ GF++
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 445 LVTITSLMVGIHKHGRWDWTDRLMKHV 471
VT+ +L+ +HK G+ + + ++ HV
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHV 701
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 207/522 (39%), Gaps = 39/522 (7%)
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDAL 290
FAL+ N + G+L F M PD+ LI C+LGK + A
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
+ E L PD TY +I G CK +I++A + ++M P + YN++L L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSL 214
Query: 351 FKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG 410
+ K+ +A ++ ++M Q TY ILI ++ A L +++ +G D
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 411 ITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKH 470
+TY+++V G +++T ++ + GRW ++L+
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 471 VREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
+ P V+ + + KG + IL + H
Sbjct: 335 MLRKGFSPSVVTFNILIN---------------FLCRKGLLGRAIDIL-----EKMPQHG 374
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS 590
+ + S +P + + K L +R+ +G DI NT L+
Sbjct: 375 C-----QPNSLSYNPLLHGFCKEKKMDRAIEYL------ERMVSRGCYP-DIVTYNTMLT 422
Query: 591 IFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
GK+ A ++ + G PV TYN+++ K G +A ++ EM K
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D TY+ ++ GL + G+ D A + G + V +N+++ L K+ + D F
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
M + G P+ +Y LIE + G+ K+A + L + + G
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 195/496 (39%), Gaps = 76/496 (15%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP-GPDLCTYNCLISVLCKLGKV 286
++++ G D YN+ I + G++ + S+ +M PD+ TYN ++ LC GK+
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
K A+ V + + PD TYT LI+ C+ + HA ++ ++M + G P + YN L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
++ + K ++ EA + M G + + T+NI++ + GR A L D+ +K
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-- 338
Query: 407 FVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDR 466
GF +VT L+ + + G
Sbjct: 339 ---------------------------------GFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 467 LMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK-DYSPMFPSKGDFSEIMS---ILTGSQ 522
+++ + + P L + + K + +Y S+G + +I++ +LT
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL- 424
Query: 523 DANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI 582
D K+ED ++ NQ+ S G + L T
Sbjct: 425 -----CKDGKVEDAV-----------EILNQLSSKGCSPVLIT----------------- 451
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
NT + GK A KL + + P + TY+S++ ++G +EA E
Sbjct: 452 --YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
+ T+N I+ GL K + D A L ++ +G + Y LI L G
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 703 IDEVNKFFEQMKSSGI 718
E + ++ + G+
Sbjct: 570 AKEALELLNELCNKGL 585
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 197/479 (41%), Gaps = 25/479 (5%)
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+T +++ + M +G P I +L+ + K +A ++ E + G
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
TYN++I G K G A ++ L + D +TY+ I+
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS 496
R D++T T L+ + +L+ +R+ P V+ + + K
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK---E 287
Query: 497 KKKDYSPMF----PSKGDFSEIMS--ILTGSQDANLDSHDTKIEDEEGDEWSLSPHM--- 547
+ D + F PS G +++ I+ S + D + + SP +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 548 DKLANQVKSSGY---ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKL 604
+ L N + G A + P Q Q S S+ N L F + K+ A +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSY-----NPLLHGFCKEKKMDRAIEY 401
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
E G P TYN+++++ K G +A I+ ++ K C + TYN +I GL K
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
G+ A +LD + + D + Y++L+ L + G++DE KFF + + GI P+ VT
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 725 YNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASILNE 783
+N+++ K+ A FL M++ GC PN + T L G + + + +LNE
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL-IEGLAYEGMAKEALELLNE 579
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 28/353 (7%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++N +L SL S + +++LD +LQ C P + Y L+ A+ R++ + A
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLD-----RMLQRDCYPDVITYTILIEATCRDSGVGHA-- 258
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+KL++ D + + +N L+ + K + +L+ F M
Sbjct: 259 --MKLLDEMR------------DRGCTPDVVTYNVLVNGICK-EGRLDEAIKFLNDMPSS 303
Query: 234 GFALDTWGYNICIHAF---GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G + +NI + + G W D + + + P + T+N LI+ LC+ G + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + E + QP+ +Y L+ G CK K+D A +M + G P + YN++L
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
L K KV +A ++ +++ +G TYN +I GL K G+ A L +++ K D
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
ITYS +V G + VT S+M+G+ K + D
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
NS+++N LL K + K++ + + M +G D YN + A G + + +
Sbjct: 378 NSLSYNPLLHGFCK-EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+Q+ P L TYN +I L K GK A+ + +++ A +PD TY++L+ G +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+D A + F++ G RP + +NS++ L K+ + A M G K + +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKG 405
Y ILI GL G + A L +L KG
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L + G+L K E G P +++ F + G +A I+ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ TYN++I G K G + A ++LDR+ D+V YNT++ +L +G++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQ 222
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ ++M PDV+TY LIE + + A K L M D GCTP+ VT L
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 28/262 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN L++ L + IL+ + Q GC P L YN LL + + A
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQH-----GCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+++ + + +N +L AL K D K+E + K
Sbjct: 401 YLERMVS----------------RGCYPDIVTYNTMLTALCK-DGKVEDAVEILNQLSSK 443
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G + YN I G + L +M PD TY+ L+ L + GKV +A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + + +P+ T+ +++ G CK+ + D A M N G +P Y L++
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 350 LFKATKVSEACQLFEKMAQEGV 371
L EA +L ++ +G+
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D+ + N + Q + + G + L+ ++ G DI+ TLI + G+ + K
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
E ++ SG PDV+TYN +I + KAG + +A L M +P+ VT T+
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTI 210
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 132/588 (22%), Positives = 227/588 (38%), Gaps = 50/588 (8%)
Query: 211 VALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL 270
V ++KL+ + K +D A+D + Y + F D +F +M PD+
Sbjct: 68 VTFEGEELKLKSGSHYFKSLDD---AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDV 124
Query: 271 C-----------------TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
++N LI C K+ +L + L QPD T+ TL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 314 GCCKTYKIDHA---------------TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSE 358
G C +I A +F+QM G P I +N+L++ L +V E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 359 ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
A L KM +G+ TY +++G+ K G ++A L +++ D + YS I+
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 419 QXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+ +G ++ T ++ G GRW RL++ + E ++ P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 479 KVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIM-------SILTGSQDANLDSHDT 531
VL + A + AS+K +F ++ E++ ++ S H+
Sbjct: 365 DVLTFNALISASVKE--------GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 532 KIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI 591
+ + + SP + + A ++ R + + NT +
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F L+ A LF+ GV P + T N ++ F + EA + + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
YN+II G+ K + D A + L G D+ YN +I+ I + N F
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+MK +G PD TYNTLI KAG + + + + M G + + T
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 232/587 (39%), Gaps = 61/587 (10%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD------------LATSF----SLF 262
KL F + K GF D +N +H C D + T F +LF
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL-CLEDRISEALALFGYMVETGFLEAVALF 214
Query: 263 HQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
QM P + T+N LI+ LC G+V +A + + D TY T++ G CK
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
A + ++M +P ++Y++++D L K S+A LF +M ++G+ + TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
N +I G GR A L D+ ++ D +T++ ++
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
R D VT S++ G KH R+D KH+ + P V+ + ++ + +K+
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR---AKR 447
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
D + I AN +++T I +V +
Sbjct: 448 VDEGMQL--------LREISRRGLVANTTTYNTLIHG---------------FCEVDNLN 484
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
A LF V D N L F KL A +LFE+ + +D +
Sbjct: 485 AAQDLFQEMISHGVCP------DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL-GKIGRADLASAILDR 677
YN I+ K +EAW + + D+ TYN++I G GK +D A+ + +
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD-ANVLFHK 597
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ G D YNTLI KAG ID+ + +M+S+G + D T E+ +
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
Query: 738 LKDAYKFLKMMLDAGCT--PNHVTDTTLDYLGREIDKLRYQKASILN 782
+ +L+ ++ + P +V + + E L Q A ILN
Sbjct: 658 EEIIENYLRPKINGETSSIPRYVVELAEELYTVEPWLLPRQTAPILN 704
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 1/278 (0%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
++ N + + FN L+ A K E +++ +++ + F DT YN I+ F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNR 416
Query: 255 LATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
+ +F M PD+ T+N +I V C+ +V + + + +++ + TY TLI G
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ ++ A +F +M ++G P TI N LL + K+ EA +LFE + +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
YNI+IHG+ K + + A+ LFC L G D TY++++
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
G D T +L+ G K G D + L+ +R
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 28/301 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+FN L+ + + E ++ D + R + T YNS++ ++N A +F
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT---YNSMIYGFCKHNRFDDAKHMF 424
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
D ++ + + FN ++ +A E Q+ ++ ++G
Sbjct: 425 --------------------DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI-SRRGL 463
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALI 291
+T YN IH F +L + LF +M PD T N L+ C+ K+++AL
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
++E + D Y +I G CK K+D A +F + +G P YN ++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
+ +S+A LF KM G + TYN LI G +K G + + L +++ G D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 412 T 412
T
Sbjct: 644 T 644
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
N ++ FV+ + A ++ +M + P +I ++N++I+ + + + +L K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 681 QGGYLDIVMYNTLINALGKAGRID---------------EVNKFFEQMKSSGINPDVVTY 725
G D+V +NTL++ L RI E F+QM G+ P V+T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
NTLI G + +A + M+ G + VT T+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/588 (22%), Positives = 227/588 (38%), Gaps = 50/588 (8%)
Query: 211 VALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL 270
V ++KL+ + K +D A+D + Y + F D +F +M PD+
Sbjct: 68 VTFEGEELKLKSGSHYFKSLDD---AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDV 124
Query: 271 C-----------------TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
++N LI C K+ +L + L QPD T+ TL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 314 GCCKTYKIDHA---------------TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSE 358
G C +I A +F+QM G P I +N+L++ L +V E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 359 ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
A L KM +G+ TY +++G+ K G ++A L +++ D + YS I+
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 419 QXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+ +G ++ T ++ G GRW RL++ + E ++ P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 479 KVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIM-------SILTGSQDANLDSHDT 531
VL + A + AS+K +F ++ E++ ++ S H+
Sbjct: 365 DVLTFNALISASVKE--------GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 532 KIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI 591
+ + + SP + + A ++ R + + NT +
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F L+ A LF+ GV P + T N ++ F + EA + + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
YN+II G+ K + D A + L G D+ YN +I+ I + N F
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+MK +G PD TYNTLI KAG + + + + M G + + T
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 216/542 (39%), Gaps = 59/542 (10%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD------------LATSF----SLF 262
KL F + K GF D +N +H C D + T F +LF
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL-CLEDRISEALALFGYMVETGFLEAVALF 214
Query: 263 HQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
QM P + T+N LI+ LC G+V +A + + D TY T++ G CK
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
A + ++M +P ++Y++++D L K S+A LF +M ++G+ + TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
N +I G GR A L D+ ++ D +T++ ++
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
R D VT S++ G KH R+D KH+ + P V+ + ++ + +K+
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR---AKR 447
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
D + I AN +++T I +V +
Sbjct: 448 VDEGMQL--------LREISRRGLVANTTTYNTLIHG---------------FCEVDNLN 484
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
A LF V D N L F KL A +LFE+ + +D +
Sbjct: 485 AAQDLFQEMISHGVCP------DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL-GKIGRADLASAILDR 677
YN I+ K +EAW + + D+ TYN++I G GK +D A+ + +
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD-ANVLFHK 597
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ G D YNTLI KAG ID+ + +M+S+G + D T + ++ + L
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Query: 738 LK 739
K
Sbjct: 658 DK 659
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N + + FN L+ A K E +++ +++ + F DT YN I+ F +
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAK 421
Query: 260 SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+F M PD+ T+N +I V C+ +V + + + +++ + TY TLI G C+
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
++ A +F +M ++G P TI N LL + K+ EA +LFE + + YN
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+IHG+ K + + A+ LFC L G D TY++++
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
G D T +L+ G K G D + L+ +R
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 28/305 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+FN L+ + + E ++ D + R + T YNS++ ++N A +F
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT---YNSMIYGFCKHNRFDDAKHMF 424
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
D ++ + + FN ++ +A E Q+ ++ ++G
Sbjct: 425 --------------------DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI-SRRGL 463
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALI 291
+T YN IH F +L + LF +M PD T N L+ C+ K+++AL
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
++E + D Y +I G CK K+D A +F + +G P YN ++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
+ +S+A LF KM G + TYN LI G +K G + + L +++ G D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 412 TYSII 416
T ++
Sbjct: 644 TIKMV 648
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 183/453 (40%), Gaps = 56/453 (12%)
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A ++ +M +N L+ K+S + F K+ + G + T+N L
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
+HGL R A LF + + G F++ + +++ G
Sbjct: 183 LHGLCLEDRISEALALFGYMVETG-FLEAVALFDQMVEI-------------------GL 222
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
++T +L+ G+ GR L+ +V K L +I N K
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNK-----MVGKGLHIDVVTYGTIVNGMCKM--- 274
Query: 502 SPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYAS 561
GD +++L+ ++ ++ + D S +D+L S A
Sbjct: 275 -------GDTKSALNLLSKMEETHI----------KPDVVIYSAIIDRLCKDGHHSD-AQ 316
Query: 562 QLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
LF+ + +KG + ++ N + F + G+ S A +L E ++P T+N
Sbjct: 317 YLFS-----EMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
+++S+ VK+G EA + EM + D TYN +I G K R D A + D +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
D+V +NT+I+ +A R+DE + ++ G+ + TYNTLI + L A
Sbjct: 431 ----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 742 YKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
+ M+ G P+ +T L Y E +KL
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 24/239 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+FN ++ + E +Q+L I +R L+ T YN+L+ +++ A +F
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT---YNTLIHGFCEVDNLNAAQDLF 490
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
++I ++I N LL + + KLE +++
Sbjct: 491 QEMIS----------------HGVCPDTITCNILLYGFCENE-KLEEALELFEVIQMSKI 533
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALI 291
LDT YNI IH + ++ LF +P PD+ TYN +IS C + DA +
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
++ + H+PD+ TY TLI+GC K +ID + + ++M +NGF + D++
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 652
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
N ++ FV+ + A ++ +M + P +I ++N++I+ + + + +L K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 681 QGGYLDIVMYNTLINALGKAGRID---------------EVNKFFEQMKSSGINPDVVTY 725
G D+V +NTL++ L RI E F+QM G+ P V+T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
NTLI G + +A + M+ G + VT T+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/608 (23%), Positives = 226/608 (37%), Gaps = 140/608 (23%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM--PGPDLC--TYNCLISVLCKLGK 285
M +G ++ Y + F A + LF +M G LC T+N L+ VLCK G
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
VK+ + + + P+ FTY IQG C+ ++D A R+ + G +P I YN+
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+ L K +K EA KM EG++ TYN LI G K G + A + D
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD----- 346
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
GFV D T SL+ G+ G +
Sbjct: 347 ------------------------------AVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 466 RLMKHVREGDLVPKVLRWKA--------GM---EASIKNPPSKKKDYSPMFPSKGDFSEI 514
L + P V+ + GM A + N S+K + P F+ +
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK----GLIPEVQTFNIL 432
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
++ L + D L + S GY +FT
Sbjct: 433 VNGLC--------------------KMGCVSDADGLVKVMISKGYFPDIFT--------- 463
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
N + + + K+ A ++ ++ + GVDP YTYNS+++ K F
Sbjct: 464 ----------FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
+ M EK C ++ T+N++++ L + + D A +L+ + + D V + TLI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 695 NALGKAGRIDEV------------------------------------NKFFEQMKSSGI 718
+ K G +D K F++M +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKL----- 773
PD TY +++ K G + YKFL M++ G P+ T LGR I+ L
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT------LGRVINCLCVEDR 687
Query: 774 RYQKASIL 781
Y+ A I+
Sbjct: 688 VYEAAGII 695
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 218/536 (40%), Gaps = 42/536 (7%)
Query: 205 AFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS--- 260
FN+LL L +K D+K E +++ K++ K+G + + YN+ I G+L +
Sbjct: 218 TFNKLLRVLCKKGDVK-ECEKLLDKVI-KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 261 -LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
L Q P PD+ TYN LI LCK K ++A + + +PD +TY TLI G CK
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+ A RI NGF P Y SL+D L + + A LF + +G+K + YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
LI GL G A L ++ +KG + T++I+V +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G+ D+ T L+ G + + ++ + + + P V + + + K
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK---- 511
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
F ++M +++ T +E +P++ ++S
Sbjct: 512 -----------FEDVM-----------ETYKTMVEK------GCAPNLFTFNILLESLCR 543
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA-GVDPVSY 618
+L + S + D T + F G L A LF EA V +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
TYN I+ +F +K A + EM ++ D TY +++ G K G +L L +
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
++ G + +IN L R+ E +M G+ P+ V NT+ +V K
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICDVDKK 717
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 243/578 (42%), Gaps = 45/578 (7%)
Query: 198 NSNSNSIAFNQLLVALRKADMKLEF-------QQVFHKLMDKKGFALDTWGYNICIHAFG 250
NS + F L R KL + ++V + + G + Y + +G
Sbjct: 28 NSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG 87
Query: 251 CWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHF 306
G + + ++F +M P + +YN ++SVL G A V+ + PD +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
++T ++ CKT + A R+ N M + G + Y +++ ++ +E +LF KM
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
GV T+N L+ L K G + L + K+G + TY++ +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD-RLMKHVREGDLVPKVLRWKA 485
+G D++T +L+ G+ K+ ++ + L K V EG L P +
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG-LEPDSYTYNT 326
Query: 486 GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSP 545
+ KG ++ + G DA + D+++
Sbjct: 327 LIAGY----------------CKGGMVQLAERIVG--DAVFNGFVP-------DQFTYRS 361
Query: 546 HMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF 605
+D L ++ +++ A LF G+ ++ ++ + NT + +G + A +L
Sbjct: 362 LIDGLCHEGETN-RALALFNEALGKGIKP------NVILYNTLIKGLSNQGMILEAAQLA 414
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
+E G+ P T+N +++ K G ++A ++ M K DI T+N++I G
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
+ + A ILD +L G D+ YN+L+N L K + ++V + ++ M G P++ T+
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
N L+E + L +A L+ M + P+ VT TL
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 6/292 (2%)
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
AL N I +N L+ L M LE Q+ ++ M +KG + +NI ++ G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE-MSEKGLIPEVQTFNILVNGLCKMG 440
Query: 254 DLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
++ + L M PD+ T+N LI K+++AL + + + PD +TY
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+L+ G CKT K + + M G P +N LL+ L + K+ EA L E+M +
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI-TYSIIVLQXXXXXXXXX 428
V T+ LI G KNG + AYTLF +++ + TY+II+
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
R D T ++ G K G + + + + E +P +
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 54/299 (18%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIY--NSLLIASLRNNHIPLAFS 173
+FN L+H L+ILD +L G P +Y NSLL + +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDV-----MLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVAL---RKADMKLEFQQVFHKLM 230
+ ++E N FN LL +L RK D L + M
Sbjct: 518 TYKTMVE----------------KGCAPNLFTFNILLESLCRYRKLDEALGLLEE----M 557
Query: 231 DKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP-----GPDLCTYNCLISVLCKLGK 285
K D + I F GDL +++LF +M TYN +I +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V A +++++ PD +TY ++ G CKT ++ + +M NGF P
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+++ L +V EA + +M Q+G+ PEA T+ CD+ KK
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGL------------------VPEAVNTI-CDVDKK 717
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/553 (22%), Positives = 224/553 (40%), Gaps = 57/553 (10%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFG--CWGDLATS 258
S+ F+ L + E ++VF K+++ G L N+ + C+ AT+
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNY-GLVLSVDSCNVYLTRLSKDCY-KTATA 230
Query: 259 FSLFHQMPGPDLC----TYNCLISVLCKLGKVKDA--LIVWEDLNACAHQPDHFTYTTLI 312
+F + P +C +YN +I +C+LG++K+A L++ +L + PD +Y+T++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG--YTPDVISYSTVV 288
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
G C+ ++D ++ M G +P + +Y S++ +L + K++EA + F +M ++G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
Y LI G K G AA F ++ + D +TY+ I+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLR---------- 482
+G D VT T L+ G K G R+ H+ + P V+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 483 --------------WKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDS 528
WK G++ +I S G+ E + ++ + A L++
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC----KSGNIEEAVKLVGEFEAAGLNA 524
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTF 588
DT D + S MDK A ++ G+ +Q I N
Sbjct: 525 -DTVTYTTLMDAYCKSGEMDK----------AQEILKEMLGKGLQPT------IVTFNVL 567
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
++ F G L KL G+ P + T+NS++ + + A AI +M +
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
D TY +++G K A + + +G + + Y+ LI K + E +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 709 FFEQMKSSGINPD 721
F+QM+ G+ D
Sbjct: 688 VFDQMRREGLAAD 700
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA-AYTLFCD 400
V++ VL + EA ++FEKM G+ S + N+ + L K+ A A +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
+ G + +Y+I++ +G+ D+++ ++++ G + G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKA--GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
D +L++ ++ L P + + G+ I ++ +S M +G + + +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI-RQGILPDTV-VY 354
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
T D D + AS+ F + +
Sbjct: 355 TTLIDGFCKRGDIRA--------------------------ASKFFYEMHSRDITP---- 384
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
D+ +S F G + A KLF G++P S T+ +++ + K G+ +A+
Sbjct: 385 --DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ M + C ++ TY +I GL K G D A+ +L + K G +I YN+++N L
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
K+G I+E K + +++G+N D VTY TL++ + K+G + A + LK ML G P V
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 759 TDTTL 763
T L
Sbjct: 563 TFNVL 567
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 197/527 (37%), Gaps = 63/527 (11%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL----- 296
+++ ++ + WG F +F Q VL G +++A V+E +
Sbjct: 161 FDLLVYTYKDWGSDPRVFDVFFQ--------------VLVDFGLLREARRVFEKMLNYGL 206
Query: 297 ----NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
++C Y T + C YK A +F + G YN ++ + +
Sbjct: 207 VLSVDSCN------VYLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQ 258
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
++ EA L M +G +Y+ +++G + G + + L +K+KG +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
Y I+ +G + D V T+L+ G K G + +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTK 532
D+ P VL + A + F GD E + H+
Sbjct: 379 SRDITPDVLTYTAIISG---------------FCQIGDMVEAGKLF----------HEMF 413
Query: 533 IEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
+ E D + + +L N +G+ F + Q G S ++ T +
Sbjct: 414 CKGLEPDSVTFT----ELINGYCKAGHMKDAFRVH--NHMIQAGC-SPNVVTYTTLIDGL 466
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
+G L A +L + G+ P +TYNSI++ K G EA ++ E AD
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
TY ++ K G D A IL +L +G IV +N L+N G +++ K
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
M + GI P+ T+N+L++ + LK A K M G P+ T
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +T ++ + G+L KL E+ G+ P SY Y SI+ + EA
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+EM + D Y +I G K G AS + + D++ Y +I+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G + E K F +M G+ PD VT+ LI + KAG +KDA++ M+ AGC+PN VT
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 761 TTL-DYLGREID 771
TTL D L +E D
Sbjct: 460 TTLIDGLCKEGD 471
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N++++ + L+ A K+ + Q++ +++ K G +N+ ++ F G L
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 260 SLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
L + M P+ T+N L+ C +K A +++D+ + PD TY L++G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
CK + A +F +M GF Y+ L+ K K EA ++F++M +EG+ A
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 376 QTYNILIHGLIKNGRPEA 393
+ ++ K RP+
Sbjct: 702 EIFDFFSDTKYKGKRPDT 719
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 23/272 (8%)
Query: 144 HLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
H++Q GC+P + Y +L+ + + A + ++ ++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----------------GLQP 489
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +N ++ L K+ E ++ + + G DT Y + A+ G++ + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M G P + T+N L++ C G ++D + + A P+ T+ +L++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ AT I+ M + G P Y +L+ KA + EA LF++M +G S T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
Y++LI G +K + A +F ++++G D
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/553 (22%), Positives = 224/553 (40%), Gaps = 57/553 (10%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFG--CWGDLATS 258
S+ F+ L + E ++VF K+++ G L N+ + C+ AT+
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNY-GLVLSVDSCNVYLTRLSKDCY-KTATA 230
Query: 259 FSLFHQMPGPDLC----TYNCLISVLCKLGKVKDA--LIVWEDLNACAHQPDHFTYTTLI 312
+F + P +C +YN +I +C+LG++K+A L++ +L + PD +Y+T++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG--YTPDVISYSTVV 288
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
G C+ ++D ++ M G +P + +Y S++ +L + K++EA + F +M ++G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
Y LI G K G AA F ++ + D +TY+ I+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLR---------- 482
+G D VT T L+ G K G R+ H+ + P V+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 483 --------------WKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDS 528
WK G++ +I S G+ E + ++ + A L++
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC----KSGNIEEAVKLVGEFEAAGLNA 524
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTF 588
DT D + S MDK A ++ G+ +Q I N
Sbjct: 525 -DTVTYTTLMDAYCKSGEMDK----------AQEILKEMLGKGLQPT------IVTFNVL 567
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
++ F G L KL G+ P + T+NS++ + + A AI +M +
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
D TY +++G K A + + +G + + Y+ LI K + E +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 709 FFEQMKSSGINPD 721
F+QM+ G+ D
Sbjct: 688 VFDQMRREGLAAD 700
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA-AYTLFCD 400
V++ VL + EA ++FEKM G+ S + N+ + L K+ A A +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
+ G + +Y+I++ +G+ D+++ ++++ G + G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKA--GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
D +L++ ++ L P + + G+ I ++ +S M +G + + +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI-RQGILPDTV-VY 354
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
T D D + AS+ F + +
Sbjct: 355 TTLIDGFCKRGDIRA--------------------------ASKFFYEMHSRDITP---- 384
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
D+ +S F G + A KLF G++P S T+ +++ + K G+ +A+
Sbjct: 385 --DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ M + C ++ TY +I GL K G D A+ +L + K G +I YN+++N L
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
K+G I+E K + +++G+N D VTY TL++ + K+G + A + LK ML G P V
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 759 TDTTL 763
T L
Sbjct: 563 TFNVL 567
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 197/527 (37%), Gaps = 63/527 (11%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL----- 296
+++ ++ + WG F +F Q VL G +++A V+E +
Sbjct: 161 FDLLVYTYKDWGSDPRVFDVFFQ--------------VLVDFGLLREARRVFEKMLNYGL 206
Query: 297 ----NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
++C Y T + C YK A +F + G YN ++ + +
Sbjct: 207 VLSVDSCN------VYLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQ 258
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
++ EA L M +G +Y+ +++G + G + + L +K+KG +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
Y I+ +G + D V T+L+ G K G + +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTK 532
D+ P VL + A + F GD E + H+
Sbjct: 379 SRDITPDVLTYTAIISG---------------FCQIGDMVEAGKLF----------HEMF 413
Query: 533 IEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
+ E D + + +L N +G+ F + Q G S ++ T +
Sbjct: 414 CKGLEPDSVTFT----ELINGYCKAGHMKDAFRVH--NHMIQAGC-SPNVVTYTTLIDGL 466
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
+G L A +L + G+ P +TYNSI++ K G EA ++ E AD
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
TY ++ K G D A IL +L +G IV +N L+N G +++ K
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
M + GI P+ T+N+L++ + LK A K M G P+ T
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +T ++ + G+L KL E+ G+ P SY Y SI+ + EA
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+EM + D Y +I G K G AS + + D++ Y +I+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G + E K F +M G+ PD VT+ LI + KAG +KDA++ M+ AGC+PN VT
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 761 TTL-DYLGREID 771
TTL D L +E D
Sbjct: 460 TTLIDGLCKEGD 471
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N++++ + L+ A K+ + Q++ +++ K G +N+ ++ F G L
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 260 SLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
L + M P+ T+N L+ C +K A +++D+ + PD TY L++G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
CK + A +F +M GF Y+ L+ K K EA ++F++M +EG+ A
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 376 QTYNILIHGLIKNGRPEA 393
+ ++ K RP+
Sbjct: 702 EIFDFFSDTKYKGKRPDT 719
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 23/272 (8%)
Query: 144 HLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
H++Q GC+P + Y +L+ + + A + ++ ++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----------------GLQP 489
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +N ++ L K+ E ++ + + G DT Y + A+ G++ + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M G P + T+N L++ C G ++D + + A P+ T+ +L++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ AT I+ M + G P Y +L+ KA + EA LF++M +G S T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
Y++LI G +K + A +F ++++G D
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/514 (21%), Positives = 199/514 (38%), Gaps = 109/514 (21%)
Query: 254 DLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+L LF +M P P + ++ ++S + K + ++ + C D ++Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+I C+ + A + +M G+ P + +SL++ + +V +A L KM +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
G + YN +I G K G A LF +++ G D +TY+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN--------------- 213
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
SL+ G+ GRW RLM+ + D+VP V+ + A ++
Sbjct: 214 --------------------SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 490 SIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
+K +G FSE M + EE + P
Sbjct: 254 FVK---------------EGKFSEAMKLY-----------------EEMTRRCVDP---- 277
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
D+ N+ ++ G++ A ++ ++
Sbjct: 278 -------------------------------DVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
G P TYN++++ F K +E + EM ++ D TYN IIQG + GR D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A I R+ + +I Y+ L+ L R+++ FE M+ S I D+ TYN +I
Sbjct: 367 AAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K G ++DA+ + + G P+ V+ TT+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 180/430 (41%), Gaps = 40/430 (9%)
Query: 260 SLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
SLFH M G DL +YN +I+ LC+ + AL V + ++PD T ++LI G
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C+ ++ A + ++M GFRP ++YN+++D K V++A +LF++M ++GV+A
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXX 435
TYN L+ GL +GR A L D+ + + IT++ ++
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP 495
R D+ T SL+ G+ HGR D +++ + +P V+ + + K
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK--- 326
Query: 496 SKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK 555
SK+ D TK+ E + D +
Sbjct: 327 SKRVD----------------------------EGTKLFREMAQRGLVG---DTITYNTI 355
Query: 556 SSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
GY Q P Q + + +I + L ++ A LFE ++ ++
Sbjct: 356 IQGYF-QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
TYN ++ K G +AW + + K D+ +Y +I G + + D S +L
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD-KSDLL 473
Query: 676 DRLLKQGGYL 685
R +++ G L
Sbjct: 474 YRKMQEDGLL 483
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 36/285 (12%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M++ G D YN + C G + + L M P++ T+ +I V K GK
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+A+ ++E++ PD FTY +LI G C ++D A ++ + M G P + YN+
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA------------ 393
L++ K+ +V E +LF +MAQ G+ TYN +I G + GRP+A
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 394 --------------------AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
A LF +++K +D TY+I++
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+G D+V+ T+++ G + +WD +D L + ++E L+P
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 210/507 (41%), Gaps = 36/507 (7%)
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDAL 290
F + Y I A D+ LF++M P + YN LI LCK ++ DA
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAE 234
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
+++++ A P TY TLI G CK + + ++ +M + P I +N+LL L
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Query: 351 FKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG 410
FKA V +A + ++M G T++IL G N + EAA ++ G ++
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 411 ITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKH 470
T SI++ +G V + V +++ G +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG---------------Y 399
Query: 471 VREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
R+GDLV ++ +A ME P Y+ + + E+ ++A + +
Sbjct: 400 CRKGDLVGARMKIEA-MEKQGMKPDHLA--YNCLIRRFCELGEM-------ENAEKEVNK 449
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS 590
K++ +SP ++ + G + + + ++ T ++
Sbjct: 450 MKLK-------GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 591 IFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
KL A + + GV P YN ++ KG +A+ EM +K
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
++ TYN +I GL G+ A +L + ++G D+ YN+LI+ G AG + +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGL 737
E+MK SGI P + TY+ LI + +K G+
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGI 649
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 202/507 (39%), Gaps = 71/507 (14%)
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
F+L ++ P + L+ L K + + + V+ ++ +P F Y IQ K
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+ +FN+M ++ P +YN L+D L K ++++A QLF++M + S TY
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
N LI G K G PE ++ + +K D I S
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMK-----ADHIEPS------------------------ 283
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
L+T +L+ G+ K G + + ++K +++ VP + + N K
Sbjct: 284 ------LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN--EKA 335
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK--LANQVKS 556
+ ++ + D M+ T S N + KIE E L M K + N+V
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE---EILGREMAKGLVPNEV-- 390
Query: 557 SGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
+ NT + + KG L A E + G+ P
Sbjct: 391 ---------------------------IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
YN ++ F + G A + +M K + TYN++I G G+ D IL
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ G ++V Y TLIN L K ++ E M+ G++P V YN LI+ G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++DA++F K ML G N VT TL
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTL 570
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 198/491 (40%), Gaps = 38/491 (7%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P Y I KL V L ++ + P F Y LI G CK +++ A ++
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F++M P I YN+L+D KA ++ ++ E+M + ++ S T+N L+ GL K
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G E A + ++K G D T+SI+ G ++ T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
+ L+ + K G+ + + ++ LVP + + ++ +
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG---------------YCR 401
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
KGD L G++ KIE E + + P D LA +
Sbjct: 402 KGD-------LVGAR--------MKIEAME--KQGMKP--DHLAYNCLIRRFCELGEMEN 442
Query: 568 PGQRVQQ---KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
+ V + KG S ++ N + + K + + + + G P +Y +++
Sbjct: 443 AEKEVNKMKLKGV-SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
+ K EA + +M ++ + YNM+I G G+ + A +LK+G
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 685 LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKF 744
L++V YNTLI+ L G++ E ++ G+ PDV TYN+LI + AG ++
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 745 LKMMLDAGCTP 755
+ M +G P
Sbjct: 622 YEEMKRSGIKP 632
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 118/580 (20%), Positives = 232/580 (40%), Gaps = 64/580 (11%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+N L+ L K + +Q+F +++ ++ YN I + G+ SF + +M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARR-LLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P L T+N L+ L K G V+DA V +++ PD FT++ L G K
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
+ A ++ ++G + + LL+ L K K+ +A ++ + +G+ + YN +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
I G + G A ++K+G D + Y+ ++ + +G
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW----------KAGMEASI 491
+ T L+ G + +D ++K + + +P V+ + +EA I
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 492 KNPPSKKKDYSPMFP----------SKGDFSEIM----SILTGSQDANLDSHDTKIEDEE 537
+ + SP SKG + +L + NL +++T I
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI---- 571
Query: 538 GDEWSLSPHMDKLAN---QVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLA 594
D S++ + + + ++ G +FT N+ +S +
Sbjct: 572 -DGLSMTGKLSEAEDLLLEISRKGLKPDVFT-------------------YNSLISGYGF 611
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE--MGEKLCPADI 652
G + L+E +G+ P TY+ ++S K+G +TE GE D+
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE------LTERLFGEMSLKPDL 665
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
YN ++ G + A + +++++ LD YN+LI K G++ EV ++
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
M + + P+ TYN +++ H + AY + + M + G
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYN 274
K+E F K M KKG L+ YN I G L+ + L ++ PD+ TYN
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
LIS G V+ + ++E++ +P TY LI C K I+ R+F +M
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE-GIELTERLFGEMS-- 660
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
+P +VYN +L + +A L ++M ++ + TYN LI G +K G+
Sbjct: 661 -LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
+L ++ + + TY+IIV +GF++D+ L+ G
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 455 IHKHGR 460
+ + R
Sbjct: 780 LKEEWR 785
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISV 279
++ +L + D YN +H + GD+ +F+L QM G D TYN LI
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
K+GK+ + + +++NA +P+ TY +++G C+ A + +M GF
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 340 TIVYNSLLDVLFKATKVSEA 359
+ N L+ L + + EA
Sbjct: 770 VCIGNELVSGLKEEWRSKEA 789
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 204/497 (41%), Gaps = 47/497 (9%)
Query: 258 SFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+FSLF +M P P + + +++V+ K+ K + ++ + D +++T LI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
C+ ++ A + +M GFRP + SLL+ + + EA L + M G
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
+ YN +I+GL KN A +F ++KKG D +TY+ ++
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA-SIK 492
R +++ T+L+ K G L K + +VP V + + + I
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 493 NPPSKKKDYSPMFPSKGDFSEIM---SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
K + SKG F +++ +++TG ++ED K
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF------CKSKRVEDGM-----------K 345
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
L ++ G FT NT + + GKL++A K+F
Sbjct: 346 LFCEMTYQGLVGDAFT-------------------YNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+ GV P TYN ++ G +A ++ ++ + DI TYN+IIQGL + +
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + L ++G D + Y T+I+ L + G E +K +MK G P Y+ +
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Query: 730 EVHS---KAGLLKDAYK 743
H A L+K A++
Sbjct: 507 RDHYTSLSAELIKAAHE 523
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF---GCWGDLATS 258
N I F L+ K LE + ++ K M ++ + + YN I+ F GC GD
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLY-KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 259 FSLF-HQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F L + PD+ TYN LI+ CK +V+D + ++ ++ D FTY TLI G C+
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K++ A ++FN+M + G P + YN LLD L K+ +A + E + + + T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
YNI+I GL + + + A+ LF L +KG D I Y ++
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
+++KG + D NT +S G+ + A +L + +DP + +++ +FVK+G
Sbjct: 210 MEKKGIRA-DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
EA + EM + ++ TYN +I G G A + D ++ +G + D+V YN
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
TLI K+ R+++ K F +M G+ D TYNTLI + +AG L A K M+D
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 752 GCTPNHVT 759
G +P+ VT
Sbjct: 389 GVSPDIVT 396
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ ++ F G L A +F++ G P TYN++++ F K + + EM
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ D TYN +I G + G+ ++A + +R++ G DIV YN L++ L G+I++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL-- 763
E ++ S ++ D++TYN +I+ + LK+A+ + + G P+ + T+
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 764 ----DYLGREIDKL 773
L RE DKL
Sbjct: 473 GLCRKGLQREADKL 486
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ +N L+ K+ + ++F + M +G D + YN IH + G L + +F+
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M PD+ TYN L+ LC GK++ AL++ EDL D TY +IQG C+T
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+ A +F + G +P I Y +++ L + EA +L +M ++G S + Y+
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 129/316 (40%), Gaps = 40/316 (12%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF---GCWGDLATS 258
N + +N ++ L K +VF+ M+KKG D YN I G W D A
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 259 F-SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ + P++ + LI K G + +A +++++ + P+ FTY +LI G C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A +F+ M + G P + YN+L+ K+ +V + +LF +M +G+ T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 378 YNILIHG-----------------------------------LIKNGRPEAAYTLFCDLK 402
YN LIHG L NG+ E A + DL+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
K VD ITY+II+ +G D + +++ G+ + G
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 463 WTDRLMKHVREGDLVP 478
D+L + ++E +P
Sbjct: 482 EADKLCRRMKEDGFMP 497
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
I + + L+ F + A L + G P YN++++ K N A +
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
M +K AD TYN +I GL GR A+ +L ++K+ +++ + LI+ K G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
+ E +++M + P+V TYN+LI G L DA +M+ GC P+ VT
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 762 TL 763
TL
Sbjct: 329 TL 330
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADL 670
G P T S+++ F + F EA +++ M G P ++ YN +I GL K +
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP-NVVIYNTVINGLCKNRDLNN 202
Query: 671 ASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
A + + K+G D V YNTLI+ L +GR + + M I+P+V+ + LI+
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 731 VHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K G L +A K M+ PN T +L
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 569 GQRVQQKGS--DSFD-------IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
G R Q+ S DS D + + NT ++ L+ A ++F + G+ + T
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
YN+++S G + +A ++ +M ++ ++ + +I K G A + ++
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
++ ++ YN+LIN G + + F+ M S G PDVVTYNTLI K+ ++
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
D K M G + T TL
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTL 365
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 107 QDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLR 164
+ +VV + ++N L++ I + + D ++ GC P + YN+L+ +
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL-----MVSKGCFPDVVTYNTLITGFCK 336
Query: 165 NNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
+ + +F ++ ++ +N L+ +A Q+
Sbjct: 337 SKRVEDGMKLFCEMTY----------------QGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVL 280
VF++++D G + D YNI + G + + + + D+ TYN +I L
Sbjct: 381 VFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
C+ K+K+A ++ L +PD Y T+I G C+ A ++ +M +GF P
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 341 IVYNSLL 347
+Y+ L
Sbjct: 500 RIYDETL 506
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
L++ K + L+ G+ Y++ ++ F + + A A++ +M +
Sbjct: 86 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 145
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
I T ++ G + R A +++D + G ++V+YNT+IN L K ++ +
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F M+ GI D VTYNTLI S +G DA + L+ M+ PN + T L
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 146/668 (21%), Positives = 252/668 (37%), Gaps = 84/668 (12%)
Query: 119 PLLHSLIISHNFHETLQIL-DYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLK 177
P + +++ HE +Q L + I + + + L+ S++ ++NHI AF F
Sbjct: 43 PTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLL--SVVSIFAKSNHIDKAFPQFQL 100
Query: 178 LIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL 237
+ F N S+ LL+ + ++EF +K M G A
Sbjct: 101 VRSRFP---------------ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAP 145
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG------------------------------ 267
T+ +N+ I A + + LF +MP
Sbjct: 146 QTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
Query: 268 ---------PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
P+ YN ++S C+ G+ D+ + E + PD T+ + I CK
Sbjct: 206 NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 319 YKIDHATRIFNQMHNNGF----RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
K+ A+RIF+ M + + RP +I YN +L K + +A LFE + + AS
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
Q+YNI + GL+++G+ A T+ + KG +Y+I++
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNP 494
G D VT L+ G G+ D L++ + + +P + + K
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK-- 443
Query: 495 PSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQV 554
G SE +L + DT + D S +DK V
Sbjct: 444 -------------MGRISEAEELLRKMNEKGY-GLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 555 KSSGYASQLFTPTPGQRVQQKGSDSF-------DIDMVNTFLSIFLAKGKLSLACKLFEI 607
K G DS D+ +T L+ G+ + A LF
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
+ P S YN + F K+G + A+ ++ +M +K C + TYN +I GLG +
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
++D + ++G +I YNT I L + ++++ ++M I P+V ++
Sbjct: 610 IFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 728 LIEVHSKA 735
LIE K
Sbjct: 670 LIEAFCKV 677
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 137/587 (23%), Positives = 240/587 (40%), Gaps = 48/587 (8%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
FN L+ AL + +++F + M +KG + + + I + + G L + M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDE-MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P+ YN ++S C+ G+ D+ + E + PD T+ + I CK K+
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 322 DHATRIFNQMHNNGF----RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
A+RIF+ M + + RP +I YN +L K + +A LFE + + AS Q+
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YNI + GL+++G+ A T+ + KG +Y+I++
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLR--------WKAGMEA 489
G D VT L+ G G+ D L++ + + +P WK G +
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 490 SIKNPPSK--KKDYS----------PMFPSKGDFSEIMSILTGSQD------ANLDSHDT 531
+ K +K Y G+ + + I+ G + NL +
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 532 KIEDEEGDEWSLSPHM---DKLANQVKSSGY---ASQLFTPTPGQRVQQKGSDSFDIDMV 585
+ D+ E + P + L N + +G A LF G+++Q D
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP------DSVAY 562
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N F+ F +GK+S A ++ + + G TYNS++ K E ++ EM E
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K +I TYN IQ L + + + A+ +LD ++++ ++ + LI A K D
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+ FE S + + Y+ + AG L A + L+ +LD G
Sbjct: 683 AQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRG 728
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 184/457 (40%), Gaps = 81/457 (17%)
Query: 301 HQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEAC 360
++P + Y L++ C K +++ + ++ M G P T +N L+ L ++ V A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 361 QLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQX 420
+LF++M ++G K + T+ IL+ G K G + L ++ G + + Y+ IV
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV--- 224
Query: 421 XXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
+ GR D ++++++ +RE LVP +
Sbjct: 225 --------------------------------SSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 481 LRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE 540
+ + + + A K K D S +F D E DE
Sbjct: 253 VTFNSRISALCKE--GKVLDASRIFS----------------------------DMELDE 282
Query: 541 WSLSPHMDKLANQVKSSGY--------ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
+ P + + + G+ A LF ++ D + N +L
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI------RENDDLASLQSYNIWLQGL 336
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPAD 651
+ GK A + + T+ G+ P Y+YN +M K G ++A I+ M +CP D
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP-D 395
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TY ++ G +G+ D A ++L +++ + N L+++L K GRI E +
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+M G D VT N +++ +G L A + +K M
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 196/513 (38%), Gaps = 59/513 (11%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + YN L+ K +V+ +++D+ C P +T+ LI+ C + +D A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F++M G +P + L+ KA + +L M GV + YN ++ +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV----V 443
GR + + + ++++G D +T++ + ++
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSP 503
+ +T ++ G K G + L + +RE D + + + ++ +++
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH---------- 339
Query: 504 MFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL 563
G F E ++L D + +S + MD L G S
Sbjct: 340 -----GKFIEAETVLKQMTDKGIGPSI----------YSYNILMDGLCKL----GMLSDA 380
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
T + ++ D L + + GK+ A L + P +YT N +
Sbjct: 381 KTIVG---LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 624 MSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-------- 675
+ S K G +EA ++ +M EK D T N+I+ GL G D A I+
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 676 ---------------DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
D L++ D++ Y+TL+N L KAGR E F +M + P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
D V YN I K G + A++ LK M GC
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 216/554 (38%), Gaps = 52/554 (9%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
NSI +N +L K + + + +F + + A YNI + G + ++
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGKFIEAETV 348
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
QM GP + +YN L+ LCKLG + DA + + PD TY L+ G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+D A + +M N P N LL L+K ++SEA +L KM ++G T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG-ITYSIIVLQXXXXXXXXXXXXXXXXX 436
NI++ GL +G + A + ++ G G + S I L
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL-------------VDDSL 515
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS 496
+ DL+T ++L+ G+ K GR+ L + L P + +
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI----------- 564
Query: 497 KKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKS 556
+ F +G S +L K +++G SL + + +
Sbjct: 565 ----FIHHFCKQGKISSAFRVL-------------KDMEKKGCHKSLETY----NSLILG 603
Query: 557 SGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
G +Q+F ++ S +I NT + K+ A L + + + P
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
+++ ++ +F K F+ A + E +C Y+++ L G+ A+ +L+
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+L +G L +Y L+ +L K ++ + +M G D +I+ K G
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Query: 737 LLKDAYKFLKMMLD 750
K+A F M++
Sbjct: 783 NKKEANSFADKMME 796
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 145/371 (39%), Gaps = 54/371 (14%)
Query: 82 YSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQ 141
Y+L+L+ + SI+++ + QS+N L L+ F E +L
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL---- 349
Query: 142 QRHLLQPGCTPLIYN-SLLIASL-----------------RNNHIPLAFS---IFLKLIE 180
+ + G P IY+ ++L+ L RN P A + +
Sbjct: 350 -KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 181 LFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTW 240
+ + +N N+ N LL +L K E +++ K M++KG+ LDT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK-MNEKGYGLDTV 467
Query: 241 GYNICI---------------------HAFGCWGDLATSF------SLFHQMPGPDLCTY 273
NI + H G+L S+ SL PDL TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
+ L++ LCK G+ +A ++ ++ QPD Y I CK KI A R+ M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
G YNSL+ L ++ E L ++M ++G+ + TYN I L + + E
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 394 AYTLFCDLKKK 404
A L ++ +K
Sbjct: 648 ATNLLDEMMQK 658
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASA 673
P TY+++++ K G F EA + EM GEKL P +A YN+ I K G+ A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA-YNIFIHHFCKQGKISSAFR 580
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+L + K+G + + YN+LI LG +I E++ ++MK GI+P++ TYNT I+
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 734 KAGLLKDAYKFLKMMLDAGCTPN 756
+ ++DA L M+ PN
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPN 663
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLF---EIFTEAGV-DPVSYTYNSIMSSFVKKGYFNEA 636
DI N+ +S +GK+ A ++F E+ G+ P S TYN ++ F K G +A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
+ + E A + +YN+ +QGL + G+ A +L ++ +G I YN L++
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
L K G + + MK +G+ PD VTY L+ + G + A L+ M+ C PN
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 757 HVT 759
T
Sbjct: 431 AYT 433
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L F G L A LFE E +YN + V+ G F EA ++ +M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K I +YN+++ GL K+G A I+ + + G D V Y L++ G++D
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++M + P+ T N L+ K G + +A + L+ M + G + VT
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P Y YN ++ S +K+ + +M T+N++I+ L D A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
D + ++G + + L+ KAG D+ + M+S G+ P+ V YNT++ +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
G D+ K ++ M + G P+ VT
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVT 254
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPAD---IATYNMIIQGLGKIGRADLASAILDRL 678
S++S F K + ++A+ + + P + + YN++++ K R + S + +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRF-PENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+ G +N LI AL + +D + F++M G P+ T+ L+ + KAGL
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
+ L M G PN V T+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTI 223
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 253/637 (39%), Gaps = 65/637 (10%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + L+ +L KA++ ++ +++ +G +D Y + + GDL +
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMV-VRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 262 FHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F + P++ TY L+ LCK G + A + + + P+ TY+++I G K
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
++ A + +M + P Y +++D LFKA K A +L ++M GV+ +
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+ L++ L + GR + L D+ KG +D I Y+ ++
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 438 XRGFVVDLVTITSLMVGIHKHGR--WDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP 495
RG D+V+ L+ G+ K G+ DW K +RE + P + + M + K
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGADWA---YKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 496 S----------KKKDYSP----------MFPSKGDFSEIMSILTGSQ----DANLDSH-- 529
S K P M G E + IL NL ++
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 530 --DTKIEDEEGDEW-----SLSPHMDKLANQVKSSGYASQL---FTPTPGQRVQQKGSDS 579
DT + + D +L + KL+ QV ++ A+ T + +
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 580 FDIDMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
F D V N+ + + + A + + EAG+ P TYN+I+ G E
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
++EM + D TYN +I G KIG + I ++ G YN LI+
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI------------EVHSKAGLLKDAYKFL 745
G++ + + ++M G++P+ TY T+I E + KA L +A L
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLL 888
Query: 746 KMMLDA-GCTPNHVT----DTTLDYLGREIDKLRYQK 777
K M++ G P + T G ++D R+ K
Sbjct: 889 KEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLK 925
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 219/536 (40%), Gaps = 43/536 (8%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+++ +N ++ L + + E Q F M K G DT YN I F G+ + +L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQ-FLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL 218
Query: 262 FHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
++ +L T+ L+S L +++A + D+ PD T++++I CK K+
Sbjct: 219 VDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
+ +M P + Y +L+D LFKA A L+ +M G+ Y +L
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
+ GL K G A F L + Q + +TY+ +V +
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
+ ++VT +S++ G K G + L++ + + ++VP + ++ K
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK--------- 446
Query: 502 SPMFPSKGDFSEIMSILTGSQDANLD-SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
G ++ ++ S + ++ E + + L D L N +K G
Sbjct: 447 -----------------AGKEEMAIELSKEMRLIGVEENNYIL----DALVNHLKRIGRI 485
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
++ V+ S +D +N + + +F G A E E G+
Sbjct: 486 KEV-----KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVV 540
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
+YN ++S +K G WA M EK DIAT+N+++ K G ++ + D++
Sbjct: 541 SYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
G ++ N ++ L + G+++E QM I+P++ TY ++ SK
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 172/444 (38%), Gaps = 84/444 (18%)
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL-FEKMAQEGVKASCQTYNILI 382
A R + M G P + ++NSL+ V + L + KM GV N+LI
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
H K GR ++++I +L+ R
Sbjct: 137 HSFCKVGR--------------------LSFAISLLRN------------------RVIS 158
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYS 502
+D VT +++ G+ +HG D + + + + ++P + + ++
Sbjct: 159 IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG------------- 205
Query: 503 PMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQ 562
F G+F +++ + NL +H + ++L + + V S
Sbjct: 206 --FCKVGNFVRAKALVDEISELNLITHTILLSSY----YNLHAIEEAYRDMVMSG----- 254
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIF--LAKG-KLSLACKLFEIFTEAGVDPVSYT 619
FD D+V TF SI L KG K+ L E V P T
Sbjct: 255 -----------------FDPDVV-TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y +++ S K + A A+ ++M + P D+ Y +++ GL K G A LL
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ ++V Y L++ L KAG + QM + P+VVTY+++I + K G+L+
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
+A L+ M D PN T T+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTV 440
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 211/503 (41%), Gaps = 29/503 (5%)
Query: 268 PDLCTYNCLISVLCKLGKVKDAL-IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
PD +N LI G V D + +++ + AC PD F LI CK ++ A
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+ + N T+ YN+++ L + EA Q +M + G+ +YN LI G
Sbjct: 151 L---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
K G A L ++ + ++ IT++I++ GF D+V
Sbjct: 208 KVGNFVRAKALVDEISE----LNLITHTILL---SSYYNLHAIEEAYRDMVMSGFDPDVV 260
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK--KDYSPM 504
T +S++ + K G+ L++ + E + P + + +++ K + YS M
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 505 FPSKG------DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
+G ++ +M L + D K+ E+ ++ + + K+
Sbjct: 321 V-VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
+S F T Q +++ S ++ ++ ++ ++ KG L A L + V P +
Sbjct: 380 LSSAEFIIT--QMLEK--SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY--NMIIQGLGKIGRADLASAILD 676
TY +++ K G A + EM +L + Y + ++ L +IGR ++
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEM--RLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
++ +G LD + Y +LI+ K G + + E+M+ G+ DVV+YN LI K G
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553
Query: 737 LLKDAYKFLKMMLDAGCTPNHVT 759
+ + + K M + G P+ T
Sbjct: 554 KVGADWAY-KGMREKGIEPDIAT 575
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII- 640
+ + +T ++L+ +L A + GV P S +NS++ F G ++ ++I
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLKQGGYLDIVMYNTLINALGK 699
++M D+ N++I K+GR A ++L +R++ +D V YNT+I+ L +
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS----IDTVTYNTVISGLCE 173
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G DE +F +M GI PD V+YNTLI+ K G A K ++D N +T
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA----KALVDEISELNLIT 229
Query: 760 DTTL 763
T L
Sbjct: 230 HTIL 233
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 193/496 (38%), Gaps = 66/496 (13%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD YN ++++L +K I ++ +PD T+ LI+ C+ +++ A +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M + G P + +++ + + A ++ E+M + G S + N+++HG K
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
GR E A ++ + GF D T
Sbjct: 272 EGRVEDALNFIQEMSNQD----------------------------------GFFPDQYT 297
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
+L+ G+ K G +M + + P V + + + K
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK--------------- 342
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
G+ E + +L D T+ SP+ + + +Q+ T
Sbjct: 343 LGEVKEAVEVL--------DQMITR---------DCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
RV D+ N+ + +A +LFE G +P +TYN ++ S
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
KG +EA ++ +M C + TYN +I G K + A I D + G +
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
V YNTLI+ L K+ R+++ + +QM G PD TYN+L+ + G +K A ++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 748 MLDAGCTPNHVTDTTL 763
M GC P+ VT TL
Sbjct: 566 MTSNGCEPDIVTYGTL 581
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 156/368 (42%), Gaps = 55/368 (14%)
Query: 107 QDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIY--NSLLIASLR 164
QD +FN L++ L + + ++I+D +LQ G P +Y NS++ +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV-----MLQEGYDPDVYTYNSVISGLCK 342
Query: 165 NNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
+ A + ++I + + N++ +N L+ L K + ++E
Sbjct: 343 LGEVKEAVEVLDQMI----------------TRDCSPNTVTYNTLISTLCKEN-QVEEAT 385
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLG 284
+++ KG PD+CT+N LI LC
Sbjct: 386 ELARVLTSKGIL-------------------------------PDVCTFNSLIQGLCLTR 414
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+ A+ ++E++ + +PD FTY LI C K+D A + QM +G I YN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+L+D KA K EA ++F++M GV + TYN LI GL K+ R E A L + +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 405 GQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWT 464
GQ D TY+ ++ G D+VT +L+ G+ K GR +
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 465 DRLMKHVR 472
+L++ ++
Sbjct: 595 SKLLRSIQ 602
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/524 (21%), Positives = 196/524 (37%), Gaps = 103/524 (19%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ T+N LI LC+ +++ A+++ ED+ + PD T+TT++QG + +D A RI
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 328 FNQM------------------------------------HNNGFRPGTIVYNSLLDVLF 351
QM + +GF P +N+L++ L
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
KA V A ++ + M QEG TYN +I GL K G + A + + + + +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
TY+ ++ +G + D+ T SL+ G+ L + +
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 472 REGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDT 531
R P + +++ SKG E +++L
Sbjct: 427 RSKGCEPDEFTYNMLIDS---------------LCSKGKLDEALNML------------- 458
Query: 532 KIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI 591
Q++ SG A + T NT +
Sbjct: 459 --------------------KQMELSGCARSVIT-------------------YNTLIDG 479
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F K A ++F+ GV S TYN+++ K +A ++ +M + D
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TYN ++ + G A+ I+ + G DIV Y TLI+ L KAGR++ +K
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
++ GIN YN +I+ + +A + ML+ P
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 157/746 (21%), Positives = 275/746 (36%), Gaps = 128/746 (17%)
Query: 32 LNLLPPQHKQLLTEP-------VILQILSNPTLHP--SHKLHFFNWCRSHHSSPLSPSAY 82
LNL PP P +++L + P S L FN + P+ Y
Sbjct: 27 LNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALY 86
Query: 83 SLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQ 142
IL L R +K + +F L+ S E L ++D++
Sbjct: 87 EEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID 146
Query: 143 RHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSN 202
L+P YN +L + N LKL+E+ + +
Sbjct: 147 EFGLKPDTH--FYNRMLNLLVDGNS--------LKLVEISHAKMSVWGIKPDVST----- 191
Query: 203 SIAFNQLLVAL------RKADMKLEFQQVFHKLMDKKGFALDTWGY-------------- 242
FN L+ AL R A + LE + + D+K F GY
Sbjct: 192 ---FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 243 --------------NICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKL 283
N+ +H F G + + + +M PD T+N L++ LCK
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G VK A+ + + + + PD +TY ++I G CK ++ A + +QM P T+ Y
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N+L+ L K +V EA +L + +G+ T+N LI GL A LF +++
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
KG D TY++++ G ++T +L+ G K +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQD 523
+ + + + + + ++ K S++ + D +++M +
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCK---SRRVE---------DAAQLMDQMI---- 532
Query: 524 ANLDSHDTKIEDEEGDEW---SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF 580
+E ++ D++ SL H + +K + Q T S+
Sbjct: 533 ---------MEGQKPDKYTYNSLLTHFCR-GGDIKKAADIVQAMT-----------SNGC 571
Query: 581 DIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
+ D+V T +S G++ +A KL G++ + YN ++ +K EA
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 639 IITEMGEK-LCPADIATYNMIIQGLGKIGRADLASAI--LDRLLKQG------------- 682
+ EM E+ P D +Y ++ +GL G + A+ L LL++G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCN-GGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 683 GYLDIVMYNT---LINALGKAGRIDE 705
G L + M T L+N + + R E
Sbjct: 691 GLLTLSMEETLVKLVNMVMQKARFSE 716
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 599 SLACKLFEIFTEA-GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
S A +LF + ++ P Y I+ + G F++ I+ +M C +T+ +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+I+ + D +++D ++ + G D YN ++N L + V +M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
GI PDV T+N LI+ +A L+ A L+ M G P+ T TT+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 231/554 (41%), Gaps = 26/554 (4%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLC 281
FH+L+ ++GF + N + + + L + P P++ T+ LI+ C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 282 KLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K G++ A +++ + +PD Y+TLI G K + ++F+Q + G + +
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
V++S +DV K+ ++ A ++++M +G+ + TY ILI GL ++GR A+ ++ +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 402 KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
K+G +TYS ++ G+ D+V L+ G+ K G
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG-- 475
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
LM H + K+L + + N F +M I
Sbjct: 476 -----LMLHAMRFSV--KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 522 QDANLDSHDTKIEDEEG---DEWSLSPHMDKLANQVKSSGYASQL------FTPTPGQR- 571
D + ++ EG + L M K+ + + Y + + PT G +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 572 --VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+ Q+ S DI + N + + ++ A K F E ++P TYN+++ +
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
+EA I + + T ++I L K D A + + ++G + V
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
Y L++ K+ I+ K FE+M+ GI+P +V+Y+ +I+ K G + +A +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 750 DAGCTPNHVTDTTL 763
DA P+ V L
Sbjct: 769 DAKLLPDVVAYAIL 782
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 193/474 (40%), Gaps = 33/474 (6%)
Query: 299 CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSE 358
C P+ T+ TLI G CK ++D A +F M G P I Y++L+D FKA +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 359 ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
+LF + +GVK ++ I +K+G A ++ + +G + +TY+I++
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 419 QXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
RG +VT +SL+ G K G L + + + P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 479 KVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEG 538
V+ + ++ K + FS + +L S N+ ++ I
Sbjct: 460 DVVIYGVLVDGLSKQG---------LMLHAMRFS--VKMLGQSIRLNVVVFNSLI----- 503
Query: 539 DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKL 598
D W D+ + G ++ P D+ T + + + +G+L
Sbjct: 504 DGWCRLNRFDEALKVFRLMG----IYGIKP------------DVATFTTVMRVSIMEGRL 547
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
A LF + G++P + Y +++ +F K + M ADIA N++
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
I L K R + AS + L++ DIV YNT+I R+DE + FE +K +
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREID 771
P+ VT LI V K + A + +M + G PN VT +D+ + +D
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 28/342 (8%)
Query: 82 YSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQ 141
Y +++ LS+ + ++ L+ FN L+ + F E L++
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF---- 519
Query: 142 QRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNS 199
R + G P + + +++ S+ + A +F ++ ++
Sbjct: 520 -RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM----------------GL 562
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHA-FGCWG-DLAT 257
+++A+ L+ A K MK LM + + D N+ IH F C + A+
Sbjct: 563 EPDALAYCTLIDAFCK-HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 258 SF--SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
F +L PD+ TYN +I C L ++ +A ++E L P+ T T LI
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
CK +D A R+F+ M G +P + Y L+D K+ + + +LFE+M ++G+ S
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+Y+I+I GL K GR + A +F D + Y+I++
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 187/473 (39%), Gaps = 58/473 (12%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVL 280
V +K M +G + + Y I I G + +F ++ Q+ P + TY+ LI
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
CK G ++ ++ED+ + PD Y L+ G K + HA R +M R
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+V+NSL+D + + EA ++F M G+K T+ ++ I GR E A LF
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
+ K G D + Y ++ D+ ++ + K R
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKAGM--EASIKNPPSKKKDY-----SPMFPSKGDFSE 513
+ + ++ EG + P ++ + + S++ ++ + +P P+ +
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 514 IMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH---MDKLANQVKSSGYASQLFTPTPGQ 570
++ +L + D + I E+G + + + MD + V G + +LF +
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG-SFKLF-----E 730
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
+Q+K G+ P +Y+ I+ K+
Sbjct: 731 EMQEK------------------------------------GISPSIVSYSIIIDGLCKR 754
Query: 631 GYFNEAWAIITE-MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
G +EA I + + KL P D+ Y ++I+G K+GR A+ + + +L+ G
Sbjct: 755 GRVDEATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++F I E G P + TY +M F K ++ + EM EK I +Y++II
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL K GR D A+ I + + D+V Y LI K GR+ E +E M +G+ P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 721 DVVTYNTLIE 730
D + L E
Sbjct: 810 DDLLQRALSE 819
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----G 267
+LR+ D E +++F +L+ F +T I IH D+ + +F M
Sbjct: 648 SLRRLD---EAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+ TY CL+ K ++ + ++E++ P +Y+ +I G CK ++D AT I
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
F+Q + P + Y L+ K ++ EA L+E M + GVK
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLG 284
+M +KG + Y + F D+ SF LF +M P + +Y+ +I LCK G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+V +A ++ PD Y LI+G CK ++ A ++ M NG +P ++
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Query: 345 SL 346
+L
Sbjct: 816 AL 817
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 144/654 (22%), Positives = 263/654 (40%), Gaps = 70/654 (10%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAF 172
Q +N ++ S F + +++D ++QR GC P + +N+L+ A L++ L
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQR-----GCVPDLISFNTLINARLKSGG--LTP 278
Query: 173 SIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDK 232
++ ++L+++ +S ++I +N LL A + D L+ + M+
Sbjct: 279 NLAVELLDMVR------------NSGLRPDAITYNTLLSACSR-DSNLDGAVKVFEDMEA 325
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKD 288
D W YN I +G G A + LF ++ PD TYN L+ + +
Sbjct: 326 HRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEK 385
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN-NGFRPGTIVYNSLL 347
V++ + D TY T+I K ++D A +++ M +G P I Y L+
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
D L KA + EA L +M G+K + QTY+ LI G K G+ E A F + + G
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK 505
Query: 408 VDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL 467
D + YS+++ G +++G+ K R +D +
Sbjct: 506 PDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENR---SDDI 562
Query: 468 MKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLD 527
K +R+ + + GM NP EI S+L + +L
Sbjct: 563 QKTIRDMEEL-------CGM-----NPL-----------------EISSVLVKGECFDLA 593
Query: 528 SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNT 587
+ K+ G E + L + SSG S+ F + GS ++
Sbjct: 594 ARQLKVAITNGYELENDTLLSILGS-YSSSGRHSEAFELLEFLKEHASGSKR----LITE 648
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVD----PVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
L + K +L+ L E F + V S Y +++ V ++ EA + +++
Sbjct: 649 ALIVLHCKVN-NLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDL 707
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV-MYNTLINALGKAGR 702
C A + ++ K+G + A ++++ +G + MY +I A GK
Sbjct: 708 RLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKL 767
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ ++ SG PD+ T+N+L+ +++ G + A M+ G +P
Sbjct: 768 WQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLS--LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
D+ NT ++ L G L+ LA +L ++ +G+ P + TYN+++S+ + + A
Sbjct: 259 DLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ +M C D+ TYN +I G+ G A A + L +G + D V YN+L+ A
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA 378
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD-AGCTPNH 757
+ ++V + ++QM+ G D +TYNT+I ++ K G L A + K M +G P+
Sbjct: 379 RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDA 438
Query: 758 VTDTTL-DYLGR 768
+T T L D LG+
Sbjct: 439 ITYTVLIDSLGK 450
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 146/340 (42%), Gaps = 53/340 (15%)
Query: 442 VVDLVTITSLMVGIH-KHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN---PPSK 497
V D V + + M+G++ + G++ L+ +R+ VP ++ + + A +K+ P+
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 498 KKDYSPMFPSKG---DFSEIMSILTG-SQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQ 553
+ M + G D ++L+ S+D+NLD
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDG------------------------- 315
Query: 554 VKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE--- 610
A ++F R Q D+ N +S++ G+ LA + +F E
Sbjct: 316 ------AVKVFEDMEAHRCQP------DLWTYNAMISVY---GRCGLAAEAERLFMELEL 360
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
G P + TYNS++ +F ++ + + +M + D TYN II GK G+ DL
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 671 ASAILDRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + G D + Y LI++LGKA R E +M GI P + TY+ LI
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
++KAG ++A ML +G P+++ LD L R
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 5/232 (2%)
Query: 246 IHAFGCWGDLATSFSLFHQMP---GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ 302
+ G W + + +F + G + YN ++ V + GK A + + +
Sbjct: 198 LGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257
Query: 303 PDHFTYTTLIQGCCKTYKI--DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEAC 360
PD ++ TLI K+ + + A + + + N+G RP I YN+LL + + + A
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 361 QLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQX 420
++FE M + TYN +I + G A LF +L+ KG F D +TY+ ++
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 421 XXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
GF D +T +++ K G+ D +L K ++
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 136/756 (17%), Positives = 269/756 (35%), Gaps = 125/756 (16%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
++N LL++ N T ++ + QQ + G + YN+++ + + LA ++
Sbjct: 369 TYNSLLYAFARERN---TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSI--------------------AFNQLLVALRK 215
+ L +DS +N ++ L+ K
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLC 271
A + E + F ++ + G D Y++ + + ++ L+ M P
Sbjct: 486 AGKREEAEDTFSCML-RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNA-CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
Y +I L K + D D+ C P + + L++G C D A R
Sbjct: 545 LYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGEC----FDLAARQLKV 599
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQL--FEKMAQEGVK---------------- 372
NG+ S+L + + SEA +L F K G K
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNN 659
Query: 373 -------------------ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG-QFVDGIT 412
S Y L+H + N A +F DL+ G + + +
Sbjct: 660 LSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVC 719
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI-TSLMVGIHKHGRWDWTDRLMKHV 471
S++V+ +GF + T ++ K W + ++ ++
Sbjct: 720 KSMVVV-YCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNL 778
Query: 472 REGDLVPKVLRWKAGMEASIKNPPSKKKDY----------SPMFPS----------KGDF 511
R+ P + W + M A + ++ SP S G
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838
Query: 512 SEIMSILTGSQDANLDSHDTKIE------DEEGDEWSLSPHMDKLANQVKSSGY--ASQL 563
E+ ++ QD + I G+ + + K+ + +K++GY +L
Sbjct: 839 EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF----EVKKIYSSMKAAGYLPTIRL 894
Query: 564 FTPT-----PGQRVQ---------QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
+ G+RV+ ++ + ++ + N+ L ++ A ++++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E G++P TYN+++ + + E + ++ +M + TY +I GK +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + LL +G LD Y+T++ +G + K + MK++GI P + T + L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
+S +G ++A K L + D V TTL Y
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKD-----TEVELTTLPY 1105
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/307 (16%), Positives = 125/307 (40%), Gaps = 24/307 (7%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSI 174
+S N LLH+L + E +++ +Q + + I L
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGF----------------KISKSSILLMLDA 866
Query: 175 FLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKG 234
F + +F AA +I ++++ L ++ ++ M++
Sbjct: 867 FARAGNIFEVKKIYSSMKAA----GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDAL 290
F ++ +N + + D + ++ ++ PD TYN LI + C+ + ++
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
++ + + P TY +LI K ++ A ++F ++ + G + Y++++ +
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 351 FKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG 410
+ S+A +L + M G++ + T ++L+ +G P+ A + +LK +
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 411 ITYSIIV 417
+ YS ++
Sbjct: 1103 LPYSSVI 1109
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 122/302 (40%), Gaps = 10/302 (3%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+ N LL AL D +LE V + + GF + + + AF G++ ++
Sbjct: 824 SINILLHAL-CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M P + Y +I +LCK +V+DA I+ ++ + + + ++++
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+++ ++ G P YN+L+ + + + E L ++M G+ TY
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
LI K E A LF +L KG +D Y ++ G
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
L T+ LMV G ++++ ++++ ++ L + + ++A +++ KD
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS-----KD 1117
Query: 501 YS 502
Y+
Sbjct: 1118 YN 1119
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 139/646 (21%), Positives = 251/646 (38%), Gaps = 118/646 (18%)
Query: 122 HSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNN----HIPLAFSIFLK 177
H L S N H ++ LD +++ L Q C PL + S+ N+ H PL F + ++
Sbjct: 30 HLLTESPN-HAEIKELDVVKR--LRQESCVPLALH--FFKSIANSNLFKHTPLTFEVMIR 84
Query: 178 LIELFXXXXXXXXXXAALDSNSNSNSIAFNQL-LVALR-KADMKLEFQQVFHKLMDKKGF 235
+ A+D +S Q+ L D+ + V+ ++ G
Sbjct: 85 KL--------------AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQV----GL 126
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWED 295
A I FGC P + YN ++ L +++ +V+ D
Sbjct: 127 AERAVEMFYRIKEFGC---------------DPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 296 LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK 355
+ +P+ FTY L++ CK K+D A ++ +M N G P + Y +++ + +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
V E +L E+ + YN LI+GL K + A+ L ++ +KG + I+YS
Sbjct: 232 VKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 416 IVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG-RWDWTDRLMKHVREG 474
++ RG ++ T++SL+ G G +D D + +R
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 475 DLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIE 534
L P V+ + ++ F S G+ + +S+ +
Sbjct: 347 GLQPNVVAYNTLVQG---------------FCSHGNIVKAVSVFS--------------- 376
Query: 535 DEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLA 594
HM+++ Y S ++ F
Sbjct: 377 -----------HMEEIGCSPNIRTYGS--------------------------LINGFAK 399
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIAT 654
+G L A ++ +G P Y +++ + + F EA ++I M ++ C + T
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQM 713
+N I+GL GR D A + ++ +Q +IV YN L++ L KA RI+E ++
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G+ TYNTL+ AGL A + + M+ G +P+ +T
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 181/446 (40%), Gaps = 43/446 (9%)
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
+ A +F ++ G P +YN +LD L ++ ++ M ++G + + TYN+L
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
+ L KN + + A L ++ KG D ++Y+ ++ F
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI-----SSMCEVGLVKEGRELAERF 242
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
+ +L+ G+ K + LM+ + E + P V+
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI-------------------- 282
Query: 502 SPMFPSKGDFSEIMSILTGSQDANLD-SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+S ++++L S L S T++ P++ L++ VK
Sbjct: 283 --------SYSTLINVLCNSGQIELAFSFLTQMLKR-----GCHPNIYTLSSLVKGCFLR 329
Query: 561 SQLFTPTP--GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
F Q ++ G ++ NT + F + G + A +F E G P
Sbjct: 330 GTTFDALDLWNQMIRGFGLQP-NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
TY S+++ F K+G + A I +M C ++ Y +++ L + + A ++++ +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGL 737
K+ + +N I L AGR+D K F QM+ P++VTYN L++ +KA
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 738 LKDAYKFLKMMLDAGCTPNHVTDTTL 763
+++AY + + G + T TL
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTL 534
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSI 174
+N L++ L H++ +++ R +++ G +P + Y++L+ + I LAFS
Sbjct: 249 YNALINGLCKEHDYKGAFELM-----REMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 175 FLKLIE------------LFXXXXXXXXXXAALD--------SNSNSNSIAFNQLLVALR 214
++++ L ALD N +A+N L+
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDL 270
++ VF M++ G + + Y I+ F G L + ++++M P++
Sbjct: 364 SHGNIVKAVSVFSH-MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
Y ++ LC+ K K+A + E ++ P T+ I+G C ++D A ++F Q
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 331 MHNNGFRPGTIV-YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
M P IV YN LLD L KA ++ EA L ++ GV+ S TYN L+HG G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX--XXXXXXRGFVVDLVT 447
P A L + G+ D IT ++I+L R + D+++
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
T+++ G+ + + L++ + +VP + W
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 197/509 (38%), Gaps = 48/509 (9%)
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLC 271
+ +++ + ++ M + GF + + YN+ + A + + L +M PD
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
+Y +IS +C++G VK+ + E +P Y LI G CK + A + +M
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
G P I Y++L++VL + ++ A +M + G + T + L+ G G
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 392 EAAYTLFCDLKKK-GQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
A L+ + + G + + Y+ +V G ++ T S
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 451 LMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK----------KKD 500
L+ G K G D + + P V+ + +EA ++ K K++
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH-------MDKLA-- 551
+P P+ F + G DA K+ + + P+ +D LA
Sbjct: 453 CAPSVPTFNAF------IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 552 NQVKSS-GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
N+++ + G ++F R + S ++ NT L G +A +L
Sbjct: 507 NRIEEAYGLTREIF-----MRGVEWSSSTY-----NTLLHGSCNAGLPGIALQLVGKMMV 556
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAII--TEMGEKLCPADIATYNMIIQGLGKIGRA 668
G P T N I+ ++ K+G A ++ G + D+ +Y +I GL +
Sbjct: 557 DGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCR 616
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINAL 697
+ +L+R++ G I ++ LIN
Sbjct: 617 EDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
+I ++G A+ A + R+ + G + +YN +++ L RI + + MK G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
P+V TYN L++ K + A K L M + GC P+ V+ TT+
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 201/502 (40%), Gaps = 75/502 (14%)
Query: 255 LATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
A F + H P P + + L++ L + + + + + D +++T LI
Sbjct: 56 FALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC 115
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ ++ A + +M G+ P + + SLL ++ +A L M + G + +
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
YN LI GL KNG A L +++KKG D +TY+
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN-------------------- 215
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK-- 492
+L+ G+ GRW R+++ + + + P V+ + A ++ +K
Sbjct: 216 ---------------TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 493 NPPSKKKDYSPMFPSKGDFSEIM--SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
N ++ Y M S D + + SI+ G L H G + D +
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIING-----LCMH--------GRLYDAKKTFDLM 307
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
A S G + T NT +S F + KLF+ +
Sbjct: 308 A----SKGCFPNVVT-------------------YNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
G + +TYN+++ + + G A I M + DI T+ +++ GL G +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 671 ASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
A D + + Y+ IV YN +I+ L KA ++++ + F ++ G+ PD TY +I
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 731 VHSKAGLLKDAYKFLKMMLDAG 752
K G ++A + ++ M + G
Sbjct: 465 GLCKNGPRREADELIRRMKEEG 486
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFS 173
SF L+H L +L +++ G P I + SLL N I AFS
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLG-----KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ + +++ S N + +N L+ L K + +L M+KK
Sbjct: 163 LVILMVK----------------SGYEPNVVVYNTLIDGLCK-NGELNIALELLNEMEKK 205
Query: 234 GFALDTWGYNICIHAF---GCWGDLATSF-SLFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G D YN + G W D A + + PD+ T+ LI V K G + +A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+++++ + P++ TY ++I G C ++ A + F+ M + G P + YN+L+
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K V E +LF++M+ EG A TYN LIHG + G+ A +FC + + D
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 410 GITYSIIV 417
IT+ I++
Sbjct: 386 IITHCILL 393
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE-WSLSPHMDKLANQVKSSGY 559
+S PS DF+ +++ ANL ++T I + E + +S + +
Sbjct: 64 HSQPLPSIVDFTRLLT-----ATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR 118
Query: 560 ASQL-FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
S+L F + ++ + G + I + L F ++ A L + ++G +P
Sbjct: 119 CSRLSFALSVLGKMMKLGYEP-SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
YN+++ K G N A ++ EM +K AD+ TYN ++ GL GR A+ +L +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+K+ D+V + LI+ K G +DE + +++M S ++P+ VTYN++I G L
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
DA K +M GC PN VT TL
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
+++KG + D+ NT L+ G+ S A ++ + ++P T+ +++ FVK+G
Sbjct: 202 MEKKGLGA-DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
+EA + EM + + TYN II GL GR A D + +G + ++V YN
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
TLI+ K +DE K F++M G N D+ TYNTLI + + G L+ A M+
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 752 GCTPNHVTDTTL 763
TP+ +T L
Sbjct: 381 RVTPDIITHCIL 392
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 28/296 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++N LL L S + + ++L R +++ P + + +L+ ++ ++ A
Sbjct: 213 TYNTLLTGLCYSGRWSDAARML-----RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
++ ++I+ +++D N+ + + N L + R D K F LM K
Sbjct: 268 LYKEMIQ------------SSVDPNNVTYNSIINGLCMHGRLYDAKKTFD-----LMASK 310
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
G + YN I F + + LF +M D+ TYN LI C++GK++ A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L ++ + + PD T+ L+ G C +I+ A F+ M + G + YN ++
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L KA KV +A +LF ++ EGVK +TY I+I GL KNG A L +K++G
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 131/306 (42%), Gaps = 24/306 (7%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFL 176
+N L+ L + + L++L+ ++++ L G + YN+LL + A +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGL---GADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 177 KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFA 236
+++ + N + + F L+ K L+ Q +K M +
Sbjct: 236 DMMK----------------RSINPDVVTFTALIDVFVKQG-NLDEAQELYKEMIQSSVD 278
Query: 237 LDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIV 292
+ YN I+ G L + F M P++ TYN LIS CK V + + +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 293 WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
++ ++ D FTY TLI G C+ K+ A IF M + P I + LL L
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
++ A F+ M + YNI+IHGL K + E A+ LFC L +G D T
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 413 YSIIVL 418
Y+I++L
Sbjct: 459 YTIMIL 464
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + +N L+ K M E ++F + M +GF D + YN IH + G L + +
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQR-MSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F M PD+ T+ L+ LC G+++ AL+ ++D+ Y +I G CK
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
K++ A +F ++ G +P Y ++ L K EA +L +M +EG+
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/548 (21%), Positives = 226/548 (41%), Gaps = 43/548 (7%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLC 281
FH+L+ ++GF + N + + + L + P P++ T+ LI+ C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 282 KLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K G++ A +++ + +PD Y+TLI G K + ++F+Q + G + +
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
V++S +DV K+ ++ A ++++M +G+ + TY ILI GL ++GR A+ ++ +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 402 KKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
K+G +TYS ++ G+ D+V L+ G+ K G
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG-- 475
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
LM H M S+K + +F S++ G
Sbjct: 476 -----LMLH---------------AMRFSVKMLGQSIRLNVVVFN---------SLIDGW 506
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL---FTPTPGQR---VQQK 575
N K+ G + + P + ++ S PT G + + Q+
Sbjct: 507 CRLNRFDEALKVFRLMG-IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 576 GSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
S DI + N + + ++ A K F E ++P TYN+++ + +E
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 625
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
A I + + T ++I L K D A + + ++G + V Y L++
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
K+ I+ K FE+M+ GI+P +V+Y+ +I+ K G + +A +DA P
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 756 NHVTDTTL 763
+ V L
Sbjct: 746 DVVAYAIL 753
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 229 LMDKKGFALDTWGYNICIHA-FGCWG-DLATSF--SLFHQMPGPDLCTYNCLISVLCKLG 284
LM + + D N+ IH F C + A+ F +L PD+ TYN +I C L
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
++ +A ++E L P+ T T LI CK +D A R+F+ M G +P + Y
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
L+D K+ + + +LFE+M ++G+ S +Y+I+I GL K GR + A +F
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 405 GQFVDGITYSIIV 417
D + Y+I++
Sbjct: 742 KLLPDVVAYAILI 754
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 180/459 (39%), Gaps = 39/459 (8%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+I+ A+R+ + + + G P + + +L++ K ++ A LF+ M Q G++ Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
LI G K G + LF KG +D + +S + +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G ++VT T L+ G+ + GR + + K GME SI S
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-----------LKRGMEPSIVTYSSLID 434
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+ + F+ ++ ++ + + D L+ Q +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV--------------DGLSKQ-GLMLH 479
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
A + GQ ++ ++ + N+ + + + A K+F + G+ P T
Sbjct: 480 AMRFSVKMLGQSIR------LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 620 YNSIMSSFVKKGYFNE------AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
+ ++M + + F + + M ADIA N++I L K R + AS
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+ L++ DIV YNT+I R+DE + FE +K + P+ VT LI V
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREID 771
K + A + +M + G PN VT +D+ + +D
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 182/478 (38%), Gaps = 87/478 (18%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNC 275
L V +K M +G + + Y I I G + +F ++ Q+ P + TY+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
LI CK G ++ ++ED+ + PD Y L+ G K + HA R +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY------NILIHGLIKNG 389
R +V+NSL+D + + EA ++F M G+K T+ +I+ K+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV-DLVTI 448
+P LF DL ++ + I +V+ G + D+VT
Sbjct: 552 KPTIGLQLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSK 508
+++ G R D +R+ + ++ +P P+
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLK----------------------------VTPFGPNT 642
Query: 509 GDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH---MDKLANQVKSSGYASQLFT 565
+ ++ +L + D + I E+G + + + MD + V G + +LF
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG-SFKLF- 700
Query: 566 PTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
+ +Q+KG + P +Y+ I+
Sbjct: 701 ----EEMQEKG------------------------------------ISPSIVSYSIIID 720
Query: 626 SFVKKGYFNEAWAIITE-MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
K+G +EA I + + KL P D+ Y ++I+G K+GR A+ + + +L+ G
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----G 267
+LR+ D E +++F +L+ F +T I IH D+ + +F M
Sbjct: 619 SLRRLD---EAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+ TY CL+ K ++ + ++E++ P +Y+ +I G CK ++D AT I
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
F+Q + P + Y L+ K ++ EA L+E M + GVK
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLG 284
+M +KG + Y + F D+ SF LF +M P + +Y+ +I LCK G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+V +A ++ PD Y LI+G CK ++ A ++ M NG +P ++
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 786
Query: 345 SL 346
+L
Sbjct: 787 AL 788
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 213/511 (41%), Gaps = 45/511 (8%)
Query: 251 CWG-DLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDH 305
C G +L + LF++M PD ++ ++ CK +++ A+ + + + P
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415
Query: 306 FTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEK 365
T+IQGC K + A IFN + G + N + + K KV A +
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 366 MAQEGVKASCQTYN--ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXX 423
M Q+G++ + YN +L H +KN + A ++F ++ +KG + TYSI++
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNM--DLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 424 XXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
F + V +++ G+ K G+ +++++
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL------------ 580
Query: 484 KAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMS--ILTGSQDANLDSHDTKIEDEEGDEW 541
K+K YS S ++ I+ + G D+ ++++ E E
Sbjct: 581 ------------IKEKRYSM---SCTSYNSIIDGFVKVGDTDSAVETY------REMSEN 619
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
SP++ + + ++++ + D+ + F K + A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
LF E G+ P YNS++S F G + A + +M D+ TY +I G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
L K G +LAS + LL G D +++ L+N L K G+ + +K E+MK + P+
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
V+ Y+T+I H + G L +A++ ML+ G
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 131/675 (19%), Positives = 271/675 (40%), Gaps = 42/675 (6%)
Query: 104 SIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIA 161
S K+ L P++FN LL++ I + + + R ++ P + N++L +
Sbjct: 159 SSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVV-----PFVPYVNNVLSS 213
Query: 162 SLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLE 221
+R+N I A I+ K++ + +++ L+ A + E
Sbjct: 214 LVRSNLIDEAKEIYNKMVLI----------------GVAGDNVTTQLLMRASLRERKPEE 257
Query: 222 FQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCL 276
++F ++M +G D +++ + A DL + L +M G TY +
Sbjct: 258 AVKIFRRVM-SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
I K G +++A+ V +++ T+L+ G CK ++ A +FN+M G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT 396
P ++++ +++ K ++ +A + + +M + S + +I G +K PEAA
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 397 LFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIH 456
+F D + G + I L +G ++V ++M+
Sbjct: 437 IFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 457 KHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK--DYSPMFPSKGDFSEI 514
+ D + + E L P + ++ KN + + M S + +E+
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 515 M--SILTG----SQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP 568
+ +I+ G Q + + E+ S + + + VK S + T
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVET--- 612
Query: 569 GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
R + S ++ + ++ F ++ LA ++ + Y +++ F
Sbjct: 613 -YREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
KK A+ + +E+ E +++ YN +I G +G+ D A + +++ G D+
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
Y T+I+ L K G I+ + + ++ GI PD + + L+ SK G A K L+ M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 749 LDAGCTPNHVTDTTL 763
TPN + +T+
Sbjct: 792 KKKDVTPNVLLYSTV 806
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 160/378 (42%), Gaps = 25/378 (6%)
Query: 147 QPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIE------------LFXXXXXXXXXX 192
Q G P + YN++++A R ++ LA SIF +++E L
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 193 AALD-------SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNIC 245
A D SN +N + +N ++ L K + +++ L+ +K +++ YN
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 246 IHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
I F GD ++ + +M P++ T+ LI+ CK ++ AL + ++ +
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+ D Y LI G CK + A +F+++ G P VYNSL+ K+ A
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
L++KM +G+ TY +I GL+K+G A L+ +L G D I + ++V
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVL 481
+ +++ ++++ G H+ G + RL + E +V
Sbjct: 777 KKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
Query: 482 RWKAGMEASIKNPPSKKK 499
+ + ++ PP+ K
Sbjct: 837 VFNLLVSGRVEKPPAASK 854
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 179/438 (40%), Gaps = 48/438 (10%)
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
N + + CK GKV A + + +P+ Y ++ C+ +D A IF++M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
G P Y+ L+D FK A + +M +A+ YN +I+GL K G+
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 394 AYTLFCDLKKKGQF-VDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLM 452
A + +L K+ ++ + +Y+ I+ G ++VT TSL+
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 453 VGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYS--PMFPSKG- 509
G K R D + ++ +L + + A ++ K K Y+ P G
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKK-NDMKTAYTLFSELPELGL 691
Query: 510 --DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
+ S S+++G + NL D I+ L ++ + G + LFT T
Sbjct: 692 MPNVSVYNSLISGFR--NLGKMDAAID---------------LYKKMVNDGISCDLFTYT 734
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
T + L G ++LA L+ + G+ P + +++
Sbjct: 735 -------------------TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
KKG F +A ++ EM +K ++ Y+ +I G + G + A + D +L++G D
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDD 835
Query: 688 VMYNTLINALGKAGRIDE 705
++N L+ +GR+++
Sbjct: 836 TVFNLLV-----SGRVEK 848
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/564 (21%), Positives = 215/564 (38%), Gaps = 70/564 (12%)
Query: 241 GYNI-----CIHAFGCWGDLATS---FSLFHQMP----GPDLCTYNCLISVLCKLGKVKD 288
GY I C+ G WG L + +F Q+ P YN +I L K +
Sbjct: 140 GYRISDELMCV-LIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 198
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A + ++ + + +PD FTY LI G CK +D A R+ QM G RP Y L+D
Sbjct: 199 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 258
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
A +V EA + E M + + T +HG+ + P A+ + +K +
Sbjct: 259 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 318
Query: 409 DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM 468
+ Y ++ RG++ D T + M + K
Sbjct: 319 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKG---------- 368
Query: 469 KHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDS 528
DLV + + +K P + ++ L +Q +
Sbjct: 369 -----HDLVETCRIFDGFVSRGVK-------------PGFNGYLVLVQALLNAQRFS--- 407
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ---------QKGSDS 579
EGD + +D L + V S Y + + +R++ Q S
Sbjct: 408 --------EGDRYLKQMGVDGLLSSVYS--YNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
++ NTFLS + +G + + E G P T++ I++ + +A+
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
EM E + TYN++I+ G D + + ++ + G D+ YN I + K
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++ + + + M G+ PD TY+TLI+ S++G +A + + GC P+
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD--- 634
Query: 760 DTTLDYLGREIDKLRYQKASILNE 783
Y R +++L +K+ + E
Sbjct: 635 ----SYTKRLVEELDLRKSGLSRE 654
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 151/349 (43%), Gaps = 24/349 (6%)
Query: 72 HHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFH 131
S L Y +L LS + I + + +FN + L+ H+
Sbjct: 313 EKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLV 372
Query: 132 ETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXX 191
ET +I D R + +PG + +L+ +L N +LK + +
Sbjct: 373 ETCRIFDGFVSRGV-KPGFNGYL---VLVQALLNAQRFSEGDRYLKQMGV---------- 418
Query: 192 XAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGC 251
S+ ++N ++ L KA ++E +F M +G + + +N + +
Sbjct: 419 -----DGLLSSVYSYNAVIDCLCKA-RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 252 WGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
GD+ + ++ PD+ T++ +I+ LC+ ++KDA ++++ +P+ T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y LI+ CC T D + ++F +M NG P YN+ + K KV +A +L + M
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+ G+K TY+ LI L ++GR A +F +++ G D T ++
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 66/453 (14%)
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKA---TKVSEACQ-LFEKMAQEGVKASCQTYN 379
+ + ++ ++G+R + + L+ VL + +++ C +F +++ G+K S + YN
Sbjct: 129 SMELLKEIRDSGYR----ISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYN 184
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
+I L+K+ + AY F ++ G D TY+I++
Sbjct: 185 AVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE 244
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN------ 493
G ++ T T L+ G GR D + ++ +R L P EA+I+
Sbjct: 245 GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPN--------EATIRTFVHGIF 296
Query: 494 ---PPSKKKDYSPMFPSKGDFSEIMSILTG--SQDANLD--SHDTKIEDEEGDEWSLSPH 546
PP K +L G +D+NL +D + + LS +
Sbjct: 297 RCLPPCKA----------------FEVLVGFMEKDSNLQRVGYDAVL-------YCLSNN 333
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE 606
+ K +G F G+R S +F N +S L L C++F+
Sbjct: 334 -----SMAKETGQ----FLRKIGERGYIPDSSTF-----NAAMSCLLKGHDLVETCRIFD 379
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
F GV P Y ++ + + F+E + +MG + + +YN +I L K
Sbjct: 380 GFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKAR 439
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
R + A+ L + +G ++V +NT ++ G + +V+ E++ G PDV+T++
Sbjct: 440 RIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Query: 727 TLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+I +A +KDA+ K ML+ G PN +T
Sbjct: 500 LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG---YFNEAWAIITEMGEKLCPAD 651
KG L L+ +L + ++G ++ S+ + G Y N+ +A I+ +G K
Sbjct: 123 KGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK---PS 179
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
YN +I L K DLA ++ G D YN LI+ + K G +DE + +
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
QM+ G P+V TY LI+ AG + +A K L+MM PN T T
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 213/520 (40%), Gaps = 83/520 (15%)
Query: 258 SFSLFHQMPGPDLC-----TYNCLISVLCKLGKVKDAL-----IVWEDLNACAHQPDHFT 307
+ LFH+M C ++N +++V+ G L +V ++N P+ +
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM-NISPNGLS 189
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
+ +I+ CK +D A +F M P Y +L+D L K ++ EA L ++M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
EG S YN+LI GL K G DL + + VD +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKG----------DLTRVTKLVDNM---------------- 283
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
+G V + VT +L+ G+ G+ D L++ + +P + + +
Sbjct: 284 ---------FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLI 334
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
+K + D ++S + +E G + L+ H+
Sbjct: 335 NGLVKQRRAT------------DAVRLLSSM----------------EERG--YHLNQHI 364
Query: 548 -DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE 606
L + + G A + + +++ +KG +I + + + +GK + A ++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLW--RKMAEKGCKP-NIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
+G P +YTY+S+M F K G EA + EM + C + Y+++I GL +G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM---KSSGINPDVV 723
R A + ++L G D V Y+++I L G +D K + +M + PDVV
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TYN L++ + A L MLD GC P+ +T T
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 185/457 (40%), Gaps = 50/457 (10%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+ ++N +I LCKL V A+ V+ + PD +TY TL+ G CK +ID A +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++M + G P ++YN L+D L K ++ +L + M +G + TYN LIHGL
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G+ + A +L + + +TY ++ RG+ ++
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN-PPSKKKDY----- 501
+ L+ G+ K G+ + L + + E P ++ + ++ + P++ K+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 502 -SPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
S P+ +S +M T + +E W MDK +G +
Sbjct: 425 ASGCLPNAYTYSSLMKGF----------FKTGLCEEAVQVWK---EMDK-------TGCS 464
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
F + + G++ A ++ G+ P + Y
Sbjct: 465 RNKFC-------------------YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 621 NSIMSSFVKKGYFNEAWAIITEM---GEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+SI+ G + A + EM E D+ TYN+++ GL A +L+
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 678 LLKQGGYLDIVMYNTLINALG-KAGRIDEVNKFFEQM 713
+L +G D++ NT +N L K+ D+ F E++
Sbjct: 566 MLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 22/305 (7%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHL-LQPGCTPLIYNSLLIASLRNNHIPLAFS 173
+SFN +L+ +I +H L+ DY+ ++ + L +N ++ A + + A
Sbjct: 149 KSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIE 208
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F + E + + L+ L K + +++ + M +
Sbjct: 209 VFRGMPE----------------RKCLPDGYTYCTLMDGLCKEE-RIDEAVLLLDEMQSE 251
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDA 289
G + YN+ I GDL L M P+ TYN LI LC GK+ A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + E + + P+ TY TLI G K + A R+ + M G+ +Y+ L+
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
LFK K EA L+ KMA++G K + Y++L+ GL + G+P A + + G +
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 410 GITYS 414
TYS
Sbjct: 432 AYTYS 436
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 178/402 (44%), Gaps = 40/402 (9%)
Query: 48 ILQILSNPTLHPSHKLHFFNWC-RSHHSSPLSPS--AYSLILRSLSRPAFXXXXXXXXXS 104
+L ++ N L+ L F+++ S+ + +SP+ +++L++++L + F
Sbjct: 154 VLNVIINEGLY-HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRG 212
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIAS 162
+ + + ++ L+ L E + +LD +Q GC+P +IYN L+
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE-----GCSPSPVIYNVLIDGL 267
Query: 163 LRNNHI----PLAFSIFLK-----------LIELFXXXXXXXXXXAALDSNSNS----NS 203
+ + L ++FLK LI + L+ +S N
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ + L+ L K + ++ M+++G+ L+ Y++ I G + SL+
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSS-MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M P++ Y+ L+ LC+ GK +A + + A P+ +TY++L++G KT
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+ A +++ +M G Y+ L+D L +V EA ++ KM G+K Y+
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506
Query: 380 ILIHGLIKNGRPEAAYTLF----CDLKKKGQFVDGITYSIIV 417
+I GL G +AA L+ C + K Q D +TY+I++
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ-PDVVTYNILL 547
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + + ++ A L + G P YN ++ KKG ++ M K
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
C + TYN +I GL G+ D A ++L+R++ + V Y TLIN L K R +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL-DY 765
+ M+ G + + Y+ LI K G ++A + M + GC PN V + L D
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 766 LGRE 769
L RE
Sbjct: 407 LCRE 410
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 122/309 (39%), Gaps = 49/309 (15%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSI 174
N ++S++IS F E R + + GC P ++Y+ L+ R A I
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 175 FLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKG 234
++I S N+ ++ L+ K + E QV+ K MDK G
Sbjct: 420 LNRMIA----------------SGCLPNAYTYSSLMKGFFKTGLCEEAVQVW-KEMDKTG 462
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDAL 290
+ + + Y++ I G + + ++ +M PD Y+ +I LC +G + AL
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 291 IVWEDLNACAH----QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
++ ++ C QPD TY L+ G C I A + N M + G P I N+
Sbjct: 523 KLYHEM-LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 347 LDV---------------------LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
L+ L K +VS AC + E M + + T+ +++ +
Sbjct: 582 LNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI 641
Query: 386 IKNGRPEAA 394
K + AA
Sbjct: 642 CKPKKINAA 650
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 123/545 (22%), Positives = 220/545 (40%), Gaps = 77/545 (14%)
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
A D ++I F+ L+ + M E + F+ LM +KGF T N +
Sbjct: 146 AHDRLETKSTILFDLLVRCCCQLRMVDEAIECFY-LMKEKGFYPKTETCNHILTLLSRLN 204
Query: 254 DLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+ ++ + M ++ T+N +I+VLCK GK+K A + +P TY
Sbjct: 205 RIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYN 264
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
TL+QG +I+ A I ++M + GF+P YN +L + + SE + +M +
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEI 321
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
G+ +YNILI G NG E A+ ++ K+G TY+
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN--------------- 366
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
+L+ G+ + + + L++ +RE +V + + +
Sbjct: 367 --------------------TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 490 SIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDE-EGDEWSLSPHMD 548
++ +KK HD + D + +++ + +
Sbjct: 407 YCQHGDAKKA--------------------------FALHDEMMTDGIQPTQFTYTSLIY 440
Query: 549 KLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 608
L + K+ A +LF G+ ++ D+ M+NT + A G + A L +
Sbjct: 441 VLCRKNKTRE-ADELFEKVVGKGMKP------DLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
++P TYN +M +G F EA ++ EM + D +YN +I G K G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A + D +L G ++ YN L+ L K + + +MKS GI P+ ++ ++
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 729 IEVHS 733
IE S
Sbjct: 614 IEAMS 618
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 186/456 (40%), Gaps = 35/456 (7%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
+ L++ CC+ +D A F M GF P T N +L +L + ++ A + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ +K++ T+NI+I+ L K G+ + A ++ G +TY+ +V
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
+GF D+ T ++ + GR +++ ++E LVP + + +
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
S D F + + + + T +++T I H
Sbjct: 335 RGC-----SNNGDLEMAFAYRDEMVKQGMVPT------FYTYNTLI------------HG 371
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
+ N+++ A+++ + +++KG D N ++ + G A L +
Sbjct: 372 LFMENKIE----AAEILI----REIREKGI-VLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
G+ P +TY S++ +K EA + ++ K D+ N ++ G IG
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
D A ++L + D V YN L+ L G+ +E + +MK GI PD ++YNT
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
LI +SK G K A+ ML G P +T L
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 8/304 (2%)
Query: 202 NSIAFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+S+++N L+ D+++ F + M K+G + YN IH + +
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAF--AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 261 LFHQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
L ++ D TYN LI+ C+ G K A + +++ QP FTYT+LI C
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+ K A +F ++ G +P ++ N+L+D + A L ++M +
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
TYN L+ GL G+ E A L ++K++G D I+Y+ ++
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS 496
GF L+T +L+ G+ K+ + + L++ ++ +VP + + +EA + N +
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA-MSNLDA 622
Query: 497 KKKD 500
KK D
Sbjct: 623 KKSD 626
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
NT + F +G++ A + G P TYN I+S +G +E + E+G
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIG- 322
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
L P D +YN++I+G G ++A A D ++KQG YNTLI+ L +I+
Sbjct: 323 -LVP-DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
+++ GI D VTYN LI + + G K A+ M+ G P T T+L Y
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 766 L------GREIDKL 773
+ RE D+L
Sbjct: 441 VLCRKNKTREADEL 454
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 205/494 (41%), Gaps = 36/494 (7%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
YN I VL + + + A ++ D+ FTY+ I G CK K D + + M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
GF P +N LD+L + KV A Q F M Q G + +Y ILI+GL + G+
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 393 AAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV-VDLVTITSL 451
A ++ + + G D + +V+ V + V +L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ G K GR + + L ++ + P ++ + + N K+ ++G
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKR--------AEGVM 278
Query: 512 SEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQR 571
+E+ + +G Q LD++ ++ H DK N +
Sbjct: 279 AEM--VRSGIQ---LDAYSY---NQLLKRHCRVSHPDKCYNFM----------------- 313
Query: 572 VQQKGSDSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
V++ F D+ +T + F A +LFE + G+ TY S++ +F+++
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
G + A ++ +M E D Y I+ L K G D A + + +++ D + Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
N+LI+ L ++GR+ E K FE MK PD +T+ +I + L AYK M+D
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 751 AGCTPNH-VTDTTL 763
G T + V+DT +
Sbjct: 494 KGFTLDRDVSDTLI 507
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 185/463 (39%), Gaps = 67/463 (14%)
Query: 305 HFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFE 364
Y + I K+ ID+A ++F++M ++ +R + YN + VL + ++ A ++
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 365 KMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXX 424
M G TY+ I GL K + + L D++ G D +++ +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 425 XXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWK 484
RG D+V+ T L+ G+ R G + V W
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLF---------------RAGKVTDAVEIWN 173
Query: 485 AGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLS 544
A + + + SP D +++ G H K++ L+
Sbjct: 174 AMIRSGV----------SP------DNKACAALVVGL------CHARKVD--------LA 203
Query: 545 PHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKL 604
M +A ++KS+ RV+ + N +S F G++ A L
Sbjct: 204 YEM--VAEEIKSA-------------RVK------LSTVVYNALISGFCKAGRIEKAEAL 242
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
++ G +P TYN +++ + A ++ EM D +YN +++ +
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
+ D + + ++ G+ D+V Y+TLI +A + + FE+M+ G+ +VVT
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 725 YNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT-LDYL 766
Y +LI+ + G A K L M + G +P+ + TT LD+L
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 28/311 (9%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIAS 162
IK V L +N L+ + + + Y+ + GC P + YN LL
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK-----IGCEPDLVTYNVLLNYY 265
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
NN + A + +++ S ++ ++NQLL + +
Sbjct: 266 YDNNMLKRAEGVMAEMVR----------------SGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLIS 278
K M+ +GF D Y+ I F + ++ LF +M ++ TY LI
Sbjct: 310 YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
+ G A + + + PD YTT++ CK+ +D A +FN M + P
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
I YNSL+ L ++ +V+EA +LFE M + T+ +I GLI+ + AAY ++
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 399 CDLKKKGQFVD 409
+ KG +D
Sbjct: 489 DQMMDKGFTLD 499
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 109/290 (37%), Gaps = 42/290 (14%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGD-----LATSFSLFHQMPGPDLCTYNCLISVLCKLG 284
M+ GF D W +N+ + C + + T F + + PD+ +Y LI+ L + G
Sbjct: 105 METLGFIPDIWAFNVYLDLL-CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 285 KVKDALIVWEDLNACAHQPDH------------------------------------FTY 308
KV DA+ +W + PD+ Y
Sbjct: 164 KVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVY 223
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
LI G CK +I+ A + + M G P + YN LL+ + + A + +M +
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
G++ +YN L+ + P+ Y + F D ++YS ++
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+G V+++VT TSL+ + G +L+ + E L P
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 230 MDKKGFALDTWGYNICI--HAFGCWGDLATSFSLFHQMPGP--DLCTYNCLISVLCKLGK 285
M + G LD + YN + H D +F + P D+ +Y+ LI C+
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ A ++E++ + TYT+LI+ + A ++ +QM G P I Y +
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+LD L K+ V +A +F M + + +YN LI GL ++GR A LF D+K K
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 406 QFVDGITYSIIV 417
D +T+ I+
Sbjct: 461 CCPDELTFKFII 472
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 176/484 (36%), Gaps = 114/484 (23%)
Query: 272 TYNCLISVLCKLGKVK--DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
TY+ IS LCK+ K DAL+ D+ PD + + + C+ K+ A + F
Sbjct: 81 TYSRFISGLCKVKKFDLIDALL--SDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 330 QMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG------------------- 370
M G P + Y L++ LF+A KV++A +++ M + G
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 371 -----------------VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
VK S YN LI G K GR E A L + K G D +TY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 414 SIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVRE 473
++++ G +D + L+ +H R D+ + +
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL---KRHCRVSHPDKCYNFMVK 315
Query: 474 GDLVPK----VLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ--DANLD 527
++ P+ V+ + +E + ++K +F +M+++T + A L
Sbjct: 316 -EMEPRGFCDVVSYSTLIETFCRASNTRKA--YRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 528 SHDTKIEDEEGD---EWSLSP----------HMDKLANQVKSSGYASQLF--TPTPGQRV 572
++ + + D E LSP H+ K N K+ G + + TP
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP---- 428
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
D N+ +S G+++ A KLFE
Sbjct: 429 --------DAISYNSLISGLCRSGRVTEAIKLFE-------------------------- 454
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNT 692
+M K C D T+ II GL + + A + D+++ +G LD + +T
Sbjct: 455 ---------DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 693 LINA 696
LI A
Sbjct: 506 LIKA 509
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 212 ALRKADMKLEFQQVFHKLMDKK---GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP-- 266
+L KA ++ V KL+D+ G + D Y + G++ ++ +F+ M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 267 --GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHA 324
PD +YN LIS LC+ G+V +A+ ++ED+ PD T+ +I G + K+ A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 325 TRIFNQMHNNGFRPGTIVYNSLL 347
++++QM + GF V ++L+
Sbjct: 485 YKVWDQMMDKGFTLDRDVSDTLI 507
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/507 (23%), Positives = 209/507 (41%), Gaps = 71/507 (14%)
Query: 255 LATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L S LF M P P + ++ L+S + K+ K + +WE + + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
L+ C+ ++ A +M G P + + SLL+ + +V +A +F++M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
K + YN +I GL K+ + + A L ++K DGI
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK-----DGIG------------------ 218
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
D+VT SL+ G+ GRW R++ + + ++ P V + A ++A
Sbjct: 219 ------------PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 491 IKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
+K + + +F E M + S D ++ ++ I + +D+
Sbjct: 267 VKEGRVSEAE---------EFYEEM--IRRSLDPDIVTYSLLIYG-----LCMYSRLDE- 309
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
A ++F G V KG D+ + ++ + K+ KLF ++
Sbjct: 310 ---------AEEMF----GFMVS-KGCFP-DVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADL 670
GV + TY ++ + + G N A I M +I TYN+++ GL G+ +
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 671 ASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
A IL + K G DIV YN +I + KAG + + + + G+ PD+ TY T++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 731 VHSKAGLLKDAYKFLKMMLDAGCTPNH 757
K GL ++A + M + G PN
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPNE 501
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 251 CWGD-LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDH 305
C GD + + +F QM G P++ YN +I LCK +V +AL + + PD
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 306 FTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEK 365
TY +LI G C + + ATR+ + M P +N+L+D K +VSEA + +E+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 366 MAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXX 425
M + + TY++LI+GL R + A +F + KG F D +TYSI++
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 426 XXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
RG V + VT T L+ G + G+ + + + + + + P ++ +
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 486 GMEASIKNPPSKK 498
+ N +K
Sbjct: 402 LLHGLCDNGKIEK 414
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 40/278 (14%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
FN L+ A K E ++ F++ M ++ D Y++ I+ + L + +F
Sbjct: 258 TFNALIDACVKEGRVSEAEE-FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M PD+ TY+ LI+ CK KV+ + ++ +++ + TYT LIQG C+ K
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
++ A IF +M G P I YN LL L K+ +A + M + G+ A TYNI
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
+I G+ K G A+ ++C L +G
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLN-----------------------------------CQG 461
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+ D+ T T++M+G++K G D L + ++E ++P
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N+ +S + G+ S A ++ T+ + P +T+N+++ + VK+G +EA
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM + DI TY+++I GL R D A + ++ +G + D+V Y+ LIN K+
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
+++ K F +M G+ + VTY LI+ + +AG L A + + M+ G PN +T
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 761 TTL 763
L
Sbjct: 400 NVL 402
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
+ L+ F ++ A +F+ G P YN+I+ K + A ++ M +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
D+ TYN +I GL GR A+ ++ + K+ Y D+ +N LI+A K GR+ E
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+F+E+M ++PD+VTY+ LI L +A + M+ GC P+ VT + L
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L+ F +LSLA + G +P T+ S+++ F + +A + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
++ YN II GL K + D A +L+R+ K G D+V YN+LI+ L +GR +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
+ M I PDV T+N LI+ K G + +A +F + M+ P+ VT + L Y
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/458 (20%), Positives = 187/458 (40%), Gaps = 36/458 (7%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y +++ + K+D + +F M P ++ LL + K K L+E+M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
G+ + T NIL++ + + A + + K G +T+ ++
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
G+ ++V +++ G+ K + D L+ + + + P V+ + + +
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
S G +S+ ++ S TK E D ++ + +
Sbjct: 229 SG---------------LCSSGRWSDATRMV---------SCMTKREIYP-DVFTFNALI 263
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIF--LAKGKLSLACKLF 605
D + + S ++ F +R S D D+V L I+ +L A ++F
Sbjct: 264 DACVKEGRVS--EAEEFYEEMIRR-------SLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
G P TY+ +++ + K + EM ++ + TY ++IQG +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
G+ ++A I R++ G + +I+ YN L++ L G+I++ M+ +G++ D+VTY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
N +I KAG + DA+ + G P+ T TT+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 134/328 (40%), Gaps = 24/328 (7%)
Query: 82 YSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQ 141
Y+ I+ L + +++D + ++N L+ L S + + +++ +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 142 QRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
+R + +N+L+ A ++ + A + ++I +LD + +
Sbjct: 249 KREIYPD---VFTFNALIDACVKEGRVSEAEEFYEEMIR------------RSLDPDIVT 293
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
S+ L + R L+ + M KG D Y+I I+ + + L
Sbjct: 294 YSLLIYGLCMYSR-----LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 262 FHQMPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M + TY LI C+ GK+ A ++ + C P+ TY L+ G C
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
KI+ A I M NG + YN ++ + KA +V++A ++ + +G+ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKG 405
Y ++ GL K G A LF +K+ G
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDG 496
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/585 (22%), Positives = 224/585 (38%), Gaps = 86/585 (14%)
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL-NACAHQPDHFTYTTLIQGCCK 317
FS + + +++ LI + +V D ++V++ + + P+ T + L+ G K
Sbjct: 145 FSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
A +FN M + G RP +Y ++ L + +S A ++ M G +
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN+LI GL K + A + DL K D +TY +V
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
F ++SL+ G+ K G+ + L+K V + + P + + A +++ K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 498 KKD-----------------YS---PMFPSKGDFSEIMSILTGSQDANLD---------- 527
+ + YS MF +G +S L D L
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 528 SHDTKIEDEEGDEWSLSPHMD-KLANQVKS-----SGYAS--------QLFTPTPGQRVQ 573
+ K D E ++ ++ KL V + GY S +L+ G+ +
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
I T LS G + A KLF E V P TYN ++ + ++G
Sbjct: 505 P------SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
++A+ + EM EK D +Y +I GL G+A A +D L K L+ + Y L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 694 INALGKAGRIDEV-------------------------------NKFF----EQMKSSGI 718
++ + G+++E K F ++M G+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
PD V Y ++I+ SK G K+A+ +M++ GC PN VT T +
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 209/541 (38%), Gaps = 52/541 (9%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + L+ L K GK+++AL + + + P+ F Y LI CK K A +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F++M G RP + Y+ L+D+ + K+ A +M G+K S YN LI+G K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G AA ++ K +TY+ ++ +G + T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP-SKKKDYSPMFP 506
T+L+ G+ + G +L + E ++ P + + +E + SK ++
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 507 SKGDFSEIMS--------ILTG-SQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
KG + S LTG + +A + + E +E + + + K
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
S Q + Q+G D D+ + L L L + + G+ P
Sbjct: 630 EALSVC------QEMVQRGVD-LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
Y S++ + K G F EA+ I M + C + TY +I GL K G + A + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 678 L---------LKQGGYLDIVM--------------------------YNTLINALGKAGR 702
+ + G +LDI+ YN LI + GR
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
I+E ++ +M G++PD +TY T+I + +K A + M + G P+ V T
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 763 L 763
L
Sbjct: 863 L 863
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 231/555 (41%), Gaps = 36/555 (6%)
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
+D + N +N L+ +L K E + +F + M K G + Y+I I F G
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR-MGKIGLRPNDVTYSILIDMFCRRG 416
Query: 254 DLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
L T+ S +M L YN LI+ CK G + A ++ +P TYT
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+L+ G C KI+ A R++++M G P + +LL LF+A + +A +LF +MA+
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
VK + TYN++I G + G A+ ++ +KG D +Y ++
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
++ + T L+ G + G+ + + + + + + ++ + ++
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 490 SIKNPPSKKKDYSPMFPSKGDFSEIMS--------ILTGSQDANLDSHDTKIEDEEGDEW 541
S+K+ KD F G E+ I T DA + D K E W
Sbjct: 657 SLKH-----KDRKLFF---GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK---EAFGIW 705
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV------NTFLSIFLAK 595
L + + N+V + + L + S + V FL I L K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI-LTK 764
Query: 596 GKLSLACKLFEIFTE--AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADI 652
G++ + K E+ G+ + TYN ++ F ++G EA +IT M G+ + P D
Sbjct: 765 GEVDMQ-KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP-DC 822
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
TY +I L + A + + + ++G D V YNTLI+ AG + + + +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 713 MKSSGINPDVVTYNT 727
M G+ P+ T T
Sbjct: 883 MLRQGLIPNNKTSRT 897
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 125/593 (21%), Positives = 227/593 (38%), Gaps = 76/593 (12%)
Query: 230 MDKKGFALDTWGYNICIHAF----GCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGK 285
M+ G ++ YN+ I W + L + PD+ TY L+ LCK+ +
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ L + +++ P ++L++G K KI+ A + ++ + G P VYN+
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+D L K K EA LF++M + G++ + TY+ILI + G+ + A + ++ G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+ Y+ ++ + +VT TSLM G G+ +
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 466 RLMKHVREGDLVPKVLRW--------KAGM---------EASIKNPPSKKKDYSPM---F 505
RL + + P + + +AG+ E + N + Y+ M +
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
+GD S+ L + + D +S P + L +G AS+
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVP----------DTYSYRPLIHGLC----LTGQASEAKV 598
Query: 566 PTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
G KG+ + L F +GKL A + + + GVD Y ++
Sbjct: 599 FVDGL---HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
+K + ++ EM ++ D Y +I K G A I D ++ +G
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKS------------------------------ 715
+ V Y +IN L KAG ++E +M+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 716 -----SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G+ + TYN LI + G +++A + + M+ G +P+ +T TT+
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM------------ 643
G A ++++ G P TY ++++ K G+ NEA + ++M
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 644 ---------GE--------------KLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
GE K A+ ATYNM+I+G + GR + AS ++ R++
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
G D + Y T+IN L + + + + + M GI PD V YNTLI AG +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 741 AYKFLKMMLDAGCTPNHVTDTT 762
A + ML G PN+ T T
Sbjct: 876 ATELRNEMLRQGLIPNNKTSRT 897
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P +S++ K+G EA ++ + + ++ YN +I L K + A +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
DR+ K G + V Y+ LI+ + G++D F +M +G+ V YN+LI H K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKA 778
G + A F+ M++ P VT T+L +G K + KA
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSL--MGGYCSKGKINKA 491
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
LS A ++ G D YN ++ KK EA I ++ K D+ TY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
++ GL K+ ++ ++D +L ++L+ L K G+I+E +++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT--------------DTTL 763
++P++ YN LI+ K +A M G PN VT DT L
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 764 DYLGREID 771
+LG +D
Sbjct: 423 SFLGEMVD 430
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 206/494 (41%), Gaps = 73/494 (14%)
Query: 248 AFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFT 307
A G +G +A S P P + ++ L+S + K+ K + E + + +T
Sbjct: 62 AIGLFGVMAQS------RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y LI C+ ++ A + +M G+ P + NSLL+ ++S+A L ++M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ G K T+ LIHGL + + A L +D +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVAL----------IDRMV--------------- 210
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
RG DLVT +++ G+ K G D L+ + + V+ + +
Sbjct: 211 ----------QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
++ K + +D + +++ T ++ + + + S +
Sbjct: 261 DSLCK---YRHED------------DALNLFTEMENKGV----------RPNVITYSSLI 295
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
L N + S AS+L + +++ ++ + + F+ KGKL A KL+E
Sbjct: 296 SCLCNYGRWSD-ASRLLSDMIERKINP------NLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
+ +DP +TY+S+++ F EA ++ M K C ++ TYN +I G K R
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
D + + ++G + V Y TLI+ +A D F+QM S G++P+++TYN
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 728 LIEVHSKAGLLKDA 741
L++ K G L A
Sbjct: 469 LLDGLCKNGKLAKA 482
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 194/453 (42%), Gaps = 38/453 (8%)
Query: 254 DLATSFSLFHQMPGP--DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
DL SF ++ G +L TYN LI+ C+ ++ AL + + ++PD T +L
Sbjct: 95 DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL 154
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
+ G C +I A + +QM G++P T+ + +L+ LF K SEA L ++M Q G
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGC 214
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
+ TY +++GL K G + A L ++ + + YS ++
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
+G +++T +SL+ + +GRW RL+ + E + P ++ + A ++A +
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 492 KNPPSKKKD--YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
K K + Y M S D N+ ++ + I +D+
Sbjct: 335 KKGKLVKAEKLYEEMIKR-------------SIDPNIFTYSSLING--------FCMLDR 373
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
L G A Q+ + + ++ NT ++ F ++ +LF +
Sbjct: 374 L-------GEAKQML------ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+ G+ + TY +++ F + + A + +M +I TYN+++ GL K G+
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
A + + L + DI YN +I + KAG+
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 189/454 (41%), Gaps = 32/454 (7%)
Query: 306 FTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEK 365
+ Y +++ ++D A +F M + P I ++ LL + K K EK
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 366 MAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXX 425
M G+ + TYNILI+ + R A L + K G D +T + ++
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 426 XXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
G+ D VT T+L+ G+ H + L+ + + P ++ + A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 486 GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSP 545
+ K +GD +++L + A +++ + I D
Sbjct: 224 VVNGLCK---------------RGDTDLALNLLNKMEAAKIEA-NVVIYSTVIDSLCKYR 267
Query: 546 HMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF 605
H D N LFT + V+ ++ ++ +S G+ S A +L
Sbjct: 268 HEDDALN----------LFTEMENKGVRP------NVITYSSLISCLCNYGRWSDASRLL 311
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
E ++P T+++++ +FVKKG +A + EM ++ +I TY+ +I G +
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
R A +L+ ++++ ++V YNTLIN KA R+D+ + F +M G+ + VTY
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
TLI +A +A K M+ G PN +T
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 28/352 (7%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+F L+H L + + E + ++D + QR GC P + Y +++ + LA +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQR-----GCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+ K+ A +++N S + L + D F + M+ K
Sbjct: 240 LLNKM------------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE-----MENK 282
Query: 234 GFALDTWGYNI---CIHAFGCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
G + Y+ C+ +G W D + S + + P+L T++ LI K GK+ A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
++E++ + P+ FTY++LI G C ++ A ++ M P + YN+L++
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
KA +V + +LF +M+Q G+ + TY LIHG + + A +F + G +
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+TY+I++ D+ T ++ G+ K G+W
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 97/183 (53%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI +N+ L+ F ++S A L + E G P + T+ +++ +EA A+I
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M ++ C D+ TY ++ GL K G DLA +L+++ ++V+Y+T+I++L K
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
D+ F +M++ G+ P+V+TY++LI G DA + L M++ PN VT
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 761 TTL 763
+ L
Sbjct: 327 SAL 329
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
R+ Q+G D+ ++ +G LA L A ++ Y++++ S K
Sbjct: 208 RMVQRGCQP-DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
+ ++A + TEM K ++ TY+ +I L GR AS +L ++++ ++V +
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
+ LI+A K G++ + K +E+M I+P++ TY++LI L +A + L++M+
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 751 AGCTPNHVTDTTL 763
C PN VT TL
Sbjct: 387 KDCLPNVVTYNTL 399
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G +P T NS+++ F ++A A++ +M E D T+ +I GL +A A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
A++DR++++G D+V Y ++N L K G D +M+++ I +VV Y+T+I+
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K DA M + G PN +T ++L
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A LF GV P TY+S++S G +++A ++++M E+ ++ T++ +I
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
K G+ A + + ++K+ +I Y++LIN R+ E + E M P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+VVTYNTLI KA + + + M G N VT TTL
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
LS K L E G+ YTYN +++ F + + A A++ +M +
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
DI T N ++ G R A A++D++++ G D V + TLI+ L + E
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++M G PD+VTY ++ K G A L M A N V +T+
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
SY Y ++ + + ++A + M + I ++ ++ + K+ + DL + +
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
++ G ++ YN LIN + R+ +M G PD+VT N+L+
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ DA + M++ G P+ VT TTL
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTL 189
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M K G + Y + I+ G F ++ +M P+L TYNC+++ LCK G+
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
KDA V++++ + TY TLI G C+ K++ A ++ +QM ++G P I YN+
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+D K+ +A L + G+ S TYNIL+ G + G A + +++++G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+TY+I++ G V D+ T + L+ G G+ +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 466 RLMKHVREGDLVP 478
RL K + E + P
Sbjct: 464 RLFKSMVEKNCEP 476
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 186/418 (44%), Gaps = 40/418 (9%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ ++ LI C+ G+++ + + +L P+ YTTLI GCCK +I+ A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G Y L++ LFK + +++EKM ++GV + TYN +++ L K+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
GR + A+ +F +++++G + +TY+ ++ G +L+T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSK 508
+L+ G G+ L + ++ L P ++ + + F K
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG---------------FCRK 386
Query: 509 GDFSEIMSILTGSQDANLD----SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
GD S ++ ++ + ++ I D ++ S +M+K A Q++ S L
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILI-----DTFARSDNMEK-AIQLRLSMEELGLV 440
Query: 565 TPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
D+ + + F KG+++ A +LF+ E +P YN+++
Sbjct: 441 P---------------DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+ K+G A ++ EM EK ++A+Y +I+ L K ++ A ++++++ G
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 182/449 (40%), Gaps = 33/449 (7%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y +I ++ ++ + FN+M +NGF PG+ +N LL + ++ ++ F +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ V ++ ILI G + G E ++ L +L + G + + Y+ ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
G V + T T L+ G+ K+G + + ++E + P + + M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
K+ + KD +F + +I+T + + K+ +
Sbjct: 276 NQLCKD--GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE-----------A 322
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
+K+ +Q+KS G L T NT + F GKL A L
Sbjct: 323 NKVVDQMKSDGINPNLIT-------------------YNTLIDGFCGVGKLGKALSLCRD 363
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
G+ P TYN ++S F +KG + A ++ EM E+ TY ++I +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
+ A + + + G D+ Y+ LI+ G+++E ++ F+ M P+ V YNT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+I + K G A K LK M + PN
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPN 512
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+++E E GV P YTYN +M+ K G +A+ + EM E+ +I TYN +I GL
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
+ + + A+ ++D++ G +++ YNTLI+ G++ + +KS G++P +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
VTYN L+ + G A K +K M + G P+ VT T L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 126/312 (40%), Gaps = 44/312 (14%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
QVF + M ++G + + YN I L + + QM P+L TYN LI
Sbjct: 289 QVFDE-MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
C +GK+ AL + DL + P TY L+ G C+ A ++ +M G +P
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
+ Y L+D ++ + +A QL M + G+ TY++LIHG G+ A LF
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 400 DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG 459
+ +K + + Y+ ++L G K G
Sbjct: 468 SMVEKNCEPNEVIYNTMIL-----------------------------------GYCKEG 492
Query: 460 RWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD--YSPMFPSKGDFSEIMSI 517
+L+K + E +L P V ++ +E K SK+ + M S D S SI
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS--TSI 550
Query: 518 LTGSQDANLDSH 529
L+ A DSH
Sbjct: 551 LSLISRAKNDSH 562
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%)
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIAT 654
KG++ A LF + G+ TY +++ K G + + + +M E ++ T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
YN ++ L K GR A + D + ++G +IV YNTLI L + +++E NK +QMK
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
S GINP+++TYNTLI+ G L A + + G +P+ VT
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 4/257 (1%)
Query: 231 DKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKV 286
+K LD + + I I G++ SF L ++ P++ Y LI CK G++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
+ A ++ ++ + TYT LI G K ++ +M +G P YN +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
++ L K + +A Q+F++M + GV + TYN LI GL + + A + +K G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 407 FVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDR 466
+ ITY+ ++ RG LVT L+ G + G +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 467 LMKHVREGDLVPKVLRW 483
++K + E + P + +
Sbjct: 395 MVKEMEERGIKPSKVTY 411
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G++ + L TE G P Y +++ KKG +A + EMG+ A+ TY
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
++I GL K G + +++ + G + ++ YN ++N L K GR + + F++M+
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G++ ++VTYNTLI + L +A K + M G PN +T TL
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++ G+ A ++F+ E GV TYN+++ ++ NEA ++ +M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
++ TYN +I G +G+ A ++ L +G +V YN L++ + G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K ++M+ GI P VTY LI+ +++ ++ A + M + G P+ T + L
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPG-QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL 600
+L H L QV S SQ FT + + + + + ++ ++ L+L
Sbjct: 53 NLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNL 112
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
+ F + G P S +N +++ V FN+ W+ E K+ D+ ++ ++I+
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIK 171
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
G + G + + +L L + G ++V+Y TLI+ K G I++ F +M G+
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ TY LI K G+ K ++ + M + G PN T
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + +N L+ L + +MKL M G + YN I F G L + SL
Sbjct: 302 NIVTYNTLIGGLCR-EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ P L TYN L+S C+ G A + +++ +P TYT LI +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ ++ A ++ M G P Y+ L+ +++EA +LF+ M ++ + +
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKK 404
YN +I G K G A L ++++K
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 29/318 (9%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
Y++++ L + +++D V + ++N +++ L + Q+ D +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 141 QQRHLLQPGCTPLIYNSLL---------------IASLRNNHIPLAFSIFLKLIELFXXX 185
++R + C + YN+L+ + ++++ I + LI+ F
Sbjct: 295 RERGV---SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 186 XXXXXXXAA---LDSNSNSNSIAFNQLLVA--LRKADMKLEFQQVFHKLMDKKGFALDTW 240
+ L S S S+ +LV+ RK D + V K M+++G
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV--KEMEERGIKPSKV 409
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDL 296
Y I I F ++ + L M PD+ TY+ LI C G++ +A +++ +
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+P+ Y T+I G CK A ++ +M P Y +++VL K K
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 357 SEACQLFEKMAQEGVKAS 374
EA +L EKM G+ S
Sbjct: 530 KEAERLVEKMIDSGIDPS 547
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 224/556 (40%), Gaps = 31/556 (5%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
F+ L L M E Q F K+ + F T N +H F G F
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFP-KTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M G P + TYN +I +CK G V+ A ++E++ PD TY ++I G K +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+D F +M + P I YN+L++ K K+ + + +M G+K + +Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+ K G + A + D+++ G + TY+ ++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNP------ 494
++VT T+L+ G+ R + L + ++P + + A + +K
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 495 ----PSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
K + P G F + L + A + ++ K + + + MD
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDM-VNTFLSIF--LAKGKL-SLACKLF- 605
SG PT G + + + DI++ V TF + L K KL S A F
Sbjct: 553 F----KSG------NPTEGLHLLDEMKE-LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
I + G+ + + +++ K A + +M +K D Y ++ G K
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
G A A+ D++ + G LD++ Y +L+ L ++ + F E+M GI+PD V
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 721
Query: 726 NTLIEVHSKAGLLKDA 741
++++ H + G + +A
Sbjct: 722 ISVLKKHYELGCIDEA 737
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 129/587 (21%), Positives = 227/587 (38%), Gaps = 41/587 (6%)
Query: 208 QLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP- 266
++LV L K D KL F+ F M + GF Y I H C + S+ +M
Sbjct: 113 RVLVEL-KEDPKLAFK-FFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 267 ------------------GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
P ++ L SVL LG +++A+ + + P +
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
L+ K K D R F M G RP YN ++D + K V A LFE+M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
G+ TYN +I G K GR + F ++K D ITY+ ++
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
G ++V+ ++L+ K G + +R LVP + + ++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 489 ASIK--NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
A+ K N + + M +++ + T D D+ K +E + +
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVV--TYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 547 MDKLAN---------QVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGK 597
+ LA+ + K+ A +L G+ ++ D+ + TF+ + K
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP------DLLLYGTFIWGLCSLEK 522
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
+ A + E G+ S Y ++M ++ K G E ++ EM E + T+ +
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+I GL K A +R+ G + ++ +I+ L K +++ FEQM
Sbjct: 583 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G+ PD Y +L++ + K G + +A M + G + + T+L
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 6/305 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+++ +N ++ K +L+ F + M D YN I+ F +G L
Sbjct: 296 DTVTYNSMIDGFGKVG-RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ +M G P++ +Y+ L+ CK G ++ A+ + D+ P+ +TYT+LI CK
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A R+ N+M G + Y +L+D L A ++ EA +LF KM GV + +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN LIHG +K + A L +LK +G D + Y +
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNP-PS 496
G + + T+LM K G L+ ++E D+ V+ + ++ KN S
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 497 KKKDY 501
K DY
Sbjct: 595 KAVDY 599
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + L+ L A+ E +++F K MD G + YN IH F ++ + L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGK-MDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+++ G PDL Y I LC L K++ A +V ++ C + + YTTL+ K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-GVKASCQ 376
+ + ++M + + L+D L K VS+A F +++ + G++A+
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
+ +I GL K+ + EAA TLF + +KG D Y+ ++
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 437 XXRGFVVDLVTITSLMVGI 455
G +DL+ TSL+ G+
Sbjct: 675 AEIGMKLDLLAYTSLVWGL 693
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N ++ F GKL + + + G+ P +Y++++ +F K+G +A
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + TY +I KIG A + + +L+ G ++V Y LI+ L A
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
R+ E + F +M ++G+ P++ +YN LI KA + A + L + G P+ +
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 761 TTLDYLGREIDKLRYQKASILNE 783
T + ++K+ K ++NE
Sbjct: 511 GTFIWGLCSLEKIEAAKV-VMNE 532
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/550 (21%), Positives = 217/550 (39%), Gaps = 47/550 (8%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
Y+I IHA G L +F L Q TYN LI + ++ AL + + +
Sbjct: 170 YSILIHALGRSEKLYEAF-LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGY 228
Query: 302 QPDHFTYTTLIQGCCKTYKIDHAT--RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEA 359
Q D Y+ +IQ ++ KID R++ ++ + + N ++ K+ S+A
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKA 288
Query: 360 CQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQ 419
QL G+ A T +I L +GR A LF +L++ G Y+ ++
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKG 348
Query: 420 XXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK 479
RG D T + L+ GRW+ ++K + GD+ P
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 408
Query: 480 VL---RWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL--DSHDTKIE 534
R AG F +G++ + +L + + D +
Sbjct: 409 SFVFSRLLAG------------------FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 535 DEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLA 594
+ +++ H +++ S G T NT +
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT-------------------WNTLIDCHCK 491
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIAT 654
G+ +A ++FE G P + TYN +++S+ + +++ ++ +M + ++ T
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
+ ++ GK GR + A L+ + G MYN LINA + G ++ F M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
S G+ P ++ N+LI + +A+ L+ M + G P+ VT TTL +DK
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK-- 669
Query: 775 YQKASILNEK 784
+QK ++ E+
Sbjct: 670 FQKVPVVYEE 679
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 127/641 (19%), Positives = 239/641 (37%), Gaps = 108/641 (16%)
Query: 117 FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFL 176
++ L+H+L S +E + Q+ L TPL YN+L+ A RNN I A ++
Sbjct: 170 YSILIHALGRSEKLYEAF----LLSQKQTL----TPLTYNALIGACARNNDIEKALNLIA 221
Query: 177 KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQV--FHKLMDKKG 234
K+ + S+ + ++ ++ +L +++ K++ + +K +++
Sbjct: 222 KMRQ----------------DGYQSDFVNYSLVIQSLTRSN-KIDSVMLLRLYKEIERDK 264
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDAL 290
LD N I F GD + + L L T +IS L G+ +A
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
++E+L +P Y L++G KT + A + ++M G P Y+ L+D
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 351 FKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG 410
A + A + ++M V+ + ++ L+ G G + + + ++K G D
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 411 ITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKH 470
Y++++ G D VT +L+ KHGR + + +
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 471 VREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
+ +P Y+ M S GD
Sbjct: 505 MERRGCLPCA------------------TTYNIMINSYGD-------------------- 526
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS 590
+ W M +L ++KS G + T T T +
Sbjct: 527 -------QERWD---DMKRLLGKMKSQGILPNVVTHT-------------------TLVD 557
Query: 591 IFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
++ G+ + A + E G+ P S YN++++++ ++G +A M
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
+ N +I G+ R A A+L + + G D+V Y TL+ AL + + +V +
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
E+M SG PD +L+ A +++K L A
Sbjct: 678 EEMIMSGCKPD----------RKARSMLRSALRYMKQTLRA 708
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 30/308 (9%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYN-SLLIASL 163
++Q + +++N LL + + + ++ +++R G +P + SLLI +
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-----GVSPDEHTYSLLIDAY 384
Query: 164 RNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQ 223
N + I LK +E + NS F++LL R + E+Q
Sbjct: 385 VNAGRWESARIVLKEMEA---------------GDVQPNSFVFSRLLAGFRD---RGEWQ 426
Query: 224 QVFHKLMDKK--GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLI 277
+ F L + K G D YN+ I FG + L + + F +M PD T+N LI
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 278 SVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR 337
CK G+ A ++E + P TY +I + D R+ +M + G
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
P + + +L+DV K+ + ++A + E+M G+K S YN LI+ + G E A
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 398 FCDLKKKG 405
F + G
Sbjct: 607 FRVMTSDG 614
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G+ P T+ +++ + K G FN+A + EM YN +I + G ++ A
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+ G ++ N+LINA G+ R E + MK +G+ PDVVTY TL++
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
+ + + M+ +GC P+ + L LRY K ++
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR------SALRYMKQTL 706
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 246/609 (40%), Gaps = 76/609 (12%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
A+N + L +A + + +++ + F + + I G G + + S+F +
Sbjct: 108 AYNAMASILSRARQNASLKALVVDVLNSRCF-MSPGAFGFFIRCLGNAGLVDEASSVFDR 166
Query: 265 MPGPDLC-----TYNCLISVLCKLGKVKDALI--VWEDLNACAHQPDHFTYTTLIQGCCK 317
+ LC TYNCL+ + K L+ +++ C D FT T ++Q C
Sbjct: 167 VREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCN 226
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF-KATKVSEACQLFEKMAQEGVKASCQ 376
T K + A +FN++ + G+ I +++L V F K +V +A +L E + + ++ + +
Sbjct: 227 TGKSERALSVFNEILSRGWLDEHI--STILVVSFCKWGQVDKAFELIEMLEERDIRLNYK 284
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
TY +LIHG +K R + A+ LF +++ G D Y +++
Sbjct: 285 TYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK--VLRWKAGMEASIKNP 494
G D + L+ + + V GD+ K +L +K+ E I+N
Sbjct: 345 KRSGIPPDRGILGKLLCSFSEESELSR----ITEVIIGDIDKKSVMLLYKSLFEGFIRND 400
Query: 495 PSKKKDYSPMFPSKGDF-----SEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
+ YS + G++ SEI+ +L A L D SLS ++
Sbjct: 401 LVHEA-YSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSD-----------SLSIVINC 448
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
L K + L + Q G + M N + +G+ + KL
Sbjct: 449 LVKANKVDMAVTLL------HDIVQNGLIPGPM-MYNNIIEGMCKEGRSEESLKLLGEMK 501
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG---------------EKLC----PA 650
+AGV+P +T N I ++ F A ++ +M +KLC
Sbjct: 502 DAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAV 561
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGY----------------LDIVMYNTLI 694
D Y + G G +G ++A +D L+K G D++ Y+ LI
Sbjct: 562 DACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLI 621
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
AL KA R E + F +M S G+ P V TYN++I+ K G + + M +
Sbjct: 622 KALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN 681
Query: 755 PNHVTDTTL 763
P+ +T T+L
Sbjct: 682 PDVITYTSL 690
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 146/743 (19%), Positives = 273/743 (36%), Gaps = 67/743 (9%)
Query: 30 PVLNLLPPQHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSL 89
P L +L P+ + E V+ N FFNW AY+ + L
Sbjct: 62 PELLILSPELNTKVVETVL-----NGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASIL 116
Query: 90 SRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPG 149
SR + + P +F + L + E + D +++ L P
Sbjct: 117 SRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVP- 175
Query: 150 CTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQL 209
YN LL A ++N S ++L+E D + + +
Sbjct: 176 -NAYTYNCLLEAISKSN------SSSVELVE--------ARLKEMRDCGFHFDKFTLTPV 220
Query: 210 LVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPD 269
L VF++++ +G+ LD I + +F WG + +F L + D
Sbjct: 221 LQVYCNTGKSERALSVFNEIL-SRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 270 LC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHAT 325
+ TY LI K ++ A ++E + D Y LI G CK ++ A
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 326 RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
++ ++ +G P + LL + +++S ++ + K+ Y L G
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSLFEGF 396
Query: 386 IKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDL 445
I+N AY+ +L + DG++ + +L+ + + D
Sbjct: 397 IRNDLVHEAYSFIQNLMGNYE-SDGVSEIVKLLKDHN----------------KAILPDS 439
Query: 446 VTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK------- 498
+++ ++ + K + D L+ + + L+P + + +E K S++
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 499 -KDYSPMFPSKGDFSEIMSILTGSQD--ANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK 555
KD + + PS+ + I L D LD K+ + W H L ++
Sbjct: 500 MKD-AGVEPSQFTLNCIYGCLAERCDFVGALDLL-KKMRFYGFEPWI--KHTTFLVKKLC 555
Query: 556 SSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI--FLAKGKLSLACKLFEIFTEAGV 613
+G A + + + F MV + +I + + +LF G
Sbjct: 556 ENGRAVD-----ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
P Y+ ++ + K EA + EM K +ATYN +I G K G D +
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+ R+ + D++ Y +LI+ L +GR E + +MK P+ +T+ LI+
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 734 KAGLLKDAYKFLKMMLDAGCTPN 756
K G +A + + M + P+
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPD 753
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ Y+ LI LCK + +A I++ ++ + +P TY ++I G CK +ID
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M+ + P I Y SL+ L + + SEA + +M + + T+ LI GL K
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITY 413
G A F ++++K D Y
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
IA++ L+ AL KA +E +F++++ KG YN I + G++ S
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMV-SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 264 QM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M PD+ TY LI LC G+ +A+ W ++ P+ T+ LIQG CK
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
A F +M P + VY SL+ + ++ +F +M +G
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G D Y++ I A + LF++M P + TYN +I CK G++
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L + PD TYT+LI G C + + A +N+M P I + +L+
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
L K EA F +M ++ ++ Y L+ + + A + +F ++ KG+F
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
LF G+ P TYNS++ + K+G + + I M E D+ TY +I GL
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
GR A + + + Y + + + LI L K G E +F +M+ + PD
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSA 755
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
Y +L+ + + + + M+ G P V
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 212/554 (38%), Gaps = 73/554 (13%)
Query: 237 LDTWGYNICIHAFGCWGDLATSFSLFHQMPG--PDLCTYNCLISVLCKLGKVKD--ALIV 292
L+T ++ F WG F+ + G D+ YN + S+L + + AL+V
Sbjct: 71 LNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVV 130
Query: 293 WEDLNA-CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF-RPGTIVYNSLLDVL 350
+ LN+ C P F + G +D A+ +F+++ G P YN LL+ +
Sbjct: 131 -DVLNSRCFMSPGAFGFFIRCLG--NAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 351 FKATKVSEACQLFEKMAQE----GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
K+ S + +L E +E G T ++ G+ E A ++F ++ +G
Sbjct: 188 SKSN--SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW 245
Query: 407 FVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDR 466
+ I+ +I+V+ R ++ T L+ G K R D +
Sbjct: 246 LDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ 304
Query: 467 LMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL 526
L + +R + GM A I + +L G +
Sbjct: 305 LFEKMR-----------RMGMNADIA---------------------LYDVLIGGLCKHK 332
Query: 527 DSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVN 586
D E +LS ++ ++K SG G+ + +S +
Sbjct: 333 DL-----------EMALSLYL-----EIKRSGIPPD--RGILGKLLCSFSEESELSRITE 374
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY-NSIMSSFVKKGYFNEAWAIITEMGE 645
+ K + L LFE F + +Y++ ++M ++ G +E ++ + +
Sbjct: 375 VIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG-VSEIVKLLKDHNK 433
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ P D + +++I L K + D+A +L +++ G +MYN +I + K GR +E
Sbjct: 434 AILP-DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP--NHVT--DT 761
K +MK +G+ P T N + ++ A LK M G P H T
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 762 TLDYLGREIDKLRY 775
L GR +D +Y
Sbjct: 553 KLCENGRAVDACKY 566
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/591 (20%), Positives = 238/591 (40%), Gaps = 49/591 (8%)
Query: 154 IYNSL--LIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS-----NSNSNSIAF 206
I+N + ++ +LRN ++ L ++ + D +S + IA
Sbjct: 114 IFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIAC 173
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
N LL L K+ + ++V+ ++ D+ G ++D + I + G + L
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDR-GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW 232
Query: 267 G----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
G P++ YN +I CKLG +++A +V+++L P T+ T+I G CK
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
+ R+ +++ G R N+++D ++ + + + K TYNILI
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
+ L K G+ E A + KKG + ++Y+ ++ RG
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYS 502
D+VT L+ G+ G D + + + + P + M K
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT--------G 464
Query: 503 PMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY--A 560
P+K FSE++ D N+ D + + +D ++S + A
Sbjct: 465 RFLPAKLLFSEML-------DRNILP----------DAYVYATLIDGF---IRSGDFDEA 504
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
++F+ + + V+ D+ N + F G L A E + P +TY
Sbjct: 505 RKVFSLSVEKGVK------VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
++I+ +VK+ A I M + C ++ TY +I G G +A +
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 681 QGGYLDIVMYNTLINALGK-AGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
+ ++V Y TLI +L K + +++ ++E M ++ P+ VT+N L++
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/580 (21%), Positives = 244/580 (42%), Gaps = 34/580 (5%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
SN A + L L + + E + V L ++ L + +HA+ G L+ +
Sbjct: 97 SNGFACSSFLKLLARYRIFNEIEDVLGNLRNE-NVKLTHEALSHVLHAYAESGSLSKAVE 155
Query: 261 LFHQM-----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
++ + PD+ N L+S+L K ++ DA V++++ D+++ L++G
Sbjct: 156 IYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C K++ ++ G P + YN+++ K + A +F+++ +G +
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXX 435
+T+ +I+G K G A+ L ++K++G V + I+
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP 495
D+ T L+ + K G+ + + + L+P L + ++A K
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK--- 392
Query: 496 SKKKDYSP----MFPSKGDFSEIMS--------ILTGSQDANLDSHDTKIEDEEGDEWSL 543
SK+ D + +G +I++ +++G D ++ K+ D +
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK-VKLIDR-----GV 446
Query: 544 SPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF-DIDMVNTFLSIFLAKGKLSLAC 602
SP + N + S + F P + + D + T + F+ G A
Sbjct: 447 SPDA-AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
K+F + E GV +N+++ F + G +EA A + M E+ D TY+ II G
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 663 GKIGRADLASAI--LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
K + D+A+AI + K ++V Y +LIN G + F++M+ + P
Sbjct: 566 VK--QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 721 DVVTYNTLIEVHSK-AGLLKDAYKFLKMMLDAGCTPNHVT 759
+VVTY TLI +K + L+ A + ++M+ C PN VT
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 31/443 (6%)
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
P I NSLL +L K+ ++ +A +++++M G + IL+ G+ G+ E L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 398 FCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHK 457
KG + + Y+ I+ +GF+ L T +++ G K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 458 HGRWDWTDRLMKHVREGDLVPKVLRW------KAGMEASIKNPPSKKKDYSPMFPSKGDF 511
G + +DRL+ V+E L +V W A K P++ + K D
Sbjct: 288 EGDFVASDRLLSEVKERGL--RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 512 SEIMSILT-----GSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQV----KSSGY--A 560
+ ++ G ++ + D E + L P+ A + KS Y A
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLD------EASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
S+L ++ ++G DI + + G + A + + GV P + Y
Sbjct: 400 SKLLL-----QMAERGCKP-DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
N +MS K G F A + +EM ++ D Y +I G + G D A + ++
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
+G +D+V +N +I ++G +DE +M + PD TY+T+I+ + K +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 741 AYKFLKMMLDAGCTPNHVTDTTL 763
A K + M C PN VT T+L
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSL 596
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKL 283
+ M+K + Y I+ F C GD + F +M P++ TY LI L K
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 284 GK-VKDALIVWEDLNACAHQPDHFTYTTLIQGCCK--TYKI-------DHA-----TRIF 328
++ A+ WE + P+ T+ L+QG K + K+ +H + F
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
++M ++G+ YNS L L V AC +KM ++G ++ ++HG
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Query: 389 GRPEAAYTL-FCDLKKKGQFVDGITYSIIVLQ 419
G + + FC+L +KG V + YS ++ Q
Sbjct: 759 GNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQ 789
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 29/279 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ L+H L++S + + + + + L+ G +P IYN L+ + A
Sbjct: 417 TYGILIHGLVVSGHMDDAVNM-----KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ LD N ++ + L+ ++ E ++VF L +K
Sbjct: 472 LFSEM----------------LDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEK 514
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G +D +N I F G L + + ++M PD TY+ +I K + A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ ++ + +P+ TYT+LI G C A F +M P + Y +L+
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 350 LFK-ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
L K ++ + +A +E M + T+N L+ G +K
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 198/498 (39%), Gaps = 69/498 (13%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+ H P P + + L+SV+ K+ + + ++E + P T ++ C + +
Sbjct: 74 MVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQ 133
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A+ +M GF P + + SLL+ ++ +A LF+++ G K + TY
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
LI L KN A LF + G + +TY+
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN-------------------------- 227
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
+L+ G+ + GRW L++ + + + P V+ + A ++A +K K +
Sbjct: 228 ---------ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK--VGKLME 276
Query: 501 YSPMFPSKGDFSEIMSILT-GSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
++ S + T GS L + + DE + L N+V
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYG--LLDEARQMFYLMERNGCYPNEV----- 329
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
+ T + F ++ K+F ++ GV + T
Sbjct: 330 ------------------------IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y ++ + G + A + +M + P DI TYN+++ GL G+ + A I + +
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
K+ ++IV Y +I + K G++++ F + S G+ P+V+TY T+I + GL+
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 740 DAYKFLKMMLDAGCTPNH 757
+A K M + G PN
Sbjct: 486 EADSLFKKMKEDGFLPNE 503
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N I F L+ A K +E +++++ ++ + D + Y I+ +G L + +
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQM 315
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F+ M P+ Y LI CK +V+D + ++ +++ + TYT LIQG C
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ D A +FNQM + P YN LLD L KV +A +FE M + + + T
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y I+I G+ K G+ E A+ LFC L KG + ITY+ ++
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 182/457 (39%), Gaps = 32/457 (7%)
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
+Y +++ + + A +F +M ++ P I + LL V+ K + LFE+M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
G+ T NI++H + + +P A + K G D +T++ ++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
GF ++VT T+L+ + K+ + L + P V+ + A
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
+ + GD + ++ D +IE P+
Sbjct: 230 VTGLCE------------IGRWGDAAWLLR----------DMMKRRIE----------PN 257
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE 606
+ + + +L V + S D+ + ++ G L A ++F
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
+ G P Y +++ F K + I EM +K A+ TY ++IQG +G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
R D+A + +++ + DI YN L++ L G++++ FE M+ ++ ++VTY
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 727 TLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+I+ K G ++DA+ + G PN +T TT+
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 36/265 (13%)
Query: 250 GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G WGD A + + P++ T+ LI K+GK+ +A ++ + + PD FTY
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTY 296
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+LI G C +D A ++F M NG P ++Y +L+ K+ +V + ++F +M+Q
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 369 EGVKASC-----------------------------------QTYNILIHGLIKNGRPEA 393
+GV A+ +TYN+L+ GL NG+ E
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 394 AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMV 453
A +F ++K+ ++ +TY+II+ +G +++T T+++
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 454 GIHKHGRWDWTDRLMKHVREGDLVP 478
G + G D L K ++E +P
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + L+ K+ + ++F++ M +KG +T Y + I + G + +
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYE-MSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F+QM PD+ TYN L+ LC GKV+ AL+++E + + TYT +IQG CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
K++ A +F + + G +P I Y +++ + + EA LF+KM ++G
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 221 EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC----TYNCL 276
E +Q+F+ LM++ G + Y IH F + +F++M + TY L
Sbjct: 311 EARQMFY-LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
I C +G+ A V+ +++ PD TY L+ G C K++ A IF M
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT 396
+ Y ++ + K KV +A LF + +G+K + TY +I G + G A +
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 397 LFCDLKKKG 405
LF +K+ G
Sbjct: 490 LFKKMKEDG 498
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ L++ L + E Q+ Y+ +R+ GC P +IY +L+ ++ +
Sbjct: 295 TYGSLINGLCMYGLLDEARQMF-YLMERN----GCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
IF ++ + +N+I + L+ Q+VF+++ ++
Sbjct: 350 IFYEMSQ----------------KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDA 289
D YN+ + C G + + +F M ++ TY +I +CKLGKV+DA
Sbjct: 394 A-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
++ L + +P+ TYTT+I G C+ I A +F +M +GF P VY
Sbjct: 453 FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 242/646 (37%), Gaps = 91/646 (14%)
Query: 147 QPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS--------N 198
QPG YN +I N +P + S+ ++ A LD +
Sbjct: 110 QPGVAETFYNQRVIG---NGIVPDS-SVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPS 165
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFH--KLMDKKGFALDTWGYNICIHAFGCWGDLA 256
NS+S+ ++L R F + FH + + ++G L W G L
Sbjct: 166 RNSSSLVVDELCNQDR-------FLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLN 218
Query: 257 TSFSLFH------QMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ + +MP P + Y L CK G +A +++ + + D YT
Sbjct: 219 EAIGMLDTLCGMTRMPLP-VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTC 277
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
L++ CK + A R++ +M F ++N+L+ K + + +F +M ++G
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
V+++ TY+I+I K G + A LF +
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVN------------------------------ 367
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
++ T+L+ G +K G D L+ + + +VP + + ++
Sbjct: 368 ----NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK-- 421
Query: 491 IKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA----------NLDSHDTKIEDEEGDE 540
M P + M IL D +L + + K+E G+
Sbjct: 422 -------------MLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEI 468
Query: 541 WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQK---GSDSFDIDMVNTFLSIFLAKGK 597
++ + V ++ SQ R+++ G N+ + +
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS-YNSVIKCLFQENI 527
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
+ L I E P TY +++ KK + A+AII M E +A Y+
Sbjct: 528 IEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSS 587
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
II LGK GR A ++L+ G D + Y +IN + GRIDE N+ E++
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF 647
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ P TY LI K G+++ ++L ML+ G +PN V T L
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 131/600 (21%), Positives = 227/600 (37%), Gaps = 96/600 (16%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M ++ F LD +N IH F G L +F QM ++ TY+ +I CK G
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 286 VKDALIVW------EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
V AL ++ ED++ H YT LI G K +D A + +M +NG P
Sbjct: 358 VDYALRLFVNNTGSEDISRNVH-----CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY-TLF 398
I Y LL +L K ++ A + + + G C +I L G E +L
Sbjct: 413 HITYFVLLKMLPKCHELKYAMVILQSILDNG----CGINPPVIDDL---GNIEVKVESLL 465
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
++ +K + + +++ G + S++ + +
Sbjct: 466 GEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF------------P 506
+ L+ ++E D VP V + + N KK D F P
Sbjct: 526 NIIEDLASLVNIIQELDFVPDVDTY-----LIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
+ +S I+ L G Q +++ +T + E + P D++A + + YA
Sbjct: 581 TVAIYSSIIGSL-GKQGRVVEAEETFAKMLES---GIQP--DEIAYMIMINTYARNGRID 634
Query: 567 TPGQRVQQKGS-----DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
+ V++ SF +S F+ G + C+ + E G+ P Y
Sbjct: 635 EANELVEEVVKHFLRPSSFT---YTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL------------------- 662
+++ F+KKG F ++ + MGE D Y ++ GL
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 663 -------------------GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
G G A ++ ++ K+ ++ ++NT+I AGR+
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRL 810
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
DE E M+ GI P++VTY L++ H +AG ++ A + C P+ V +TL
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTL 867
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 195/510 (38%), Gaps = 51/510 (10%)
Query: 278 SVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR 337
+ LC AL E + P F+Y ++I+ + I+ + N + F
Sbjct: 485 TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV 544
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
P Y +++ L K A + + M + G++ + Y+ +I L K GR A
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 398 FCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHK 457
F + + G D I Y I++ T T L+ G K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 458 HGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSE---- 513
G + + + + E L P V+ + A + +K K D+ F G E
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK-----KGDFKFSFTLFGLMGENDIK 719
Query: 514 -----IMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP 568
+++L+G A ++ E G E KL ++ ++ P
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKE--------KLLQRL----IRTKPLVSIP 767
Query: 569 GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
+ GS SF ++++ GK+ + + P Y +N+I++ +
Sbjct: 768 SS-LGNYGSKSFAMEVI----------GKV-----------KKSIIPNLYLHNTIITGYC 805
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
G +EA+ + M ++ ++ TY ++++ I D+ SAI D D V
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS--HIEAGDIESAI-DLFEGTNCEPDQV 862
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
MY+TL+ L R + +M+ SGINP+ +Y L++ + L +A K +K M
Sbjct: 863 MYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDM 922
Query: 749 LDAGCTPNHVTDTTLDYLGREIDKLRYQKA 778
P + T L Y+ E KLR +A
Sbjct: 923 AALDIWPRSINHTWLIYILCEEKKLREARA 952
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAG--VDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+++ + F +G + A LF+ G VD V YT +M + K A +
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT--CLMKEYCKDNNMTMAMRL 294
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
M E+ D +N +I G K+G D + +++K+G ++ Y+ +I + K
Sbjct: 295 YLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCK 354
Query: 700 AGRIDEVNKFF-EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
G +D + F S I+ +V Y LI K G + A L MLD G P+H+
Sbjct: 355 EGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHI 414
Query: 759 TDTTLDYLGREIDKLRY 775
T L + + +L+Y
Sbjct: 415 TYFVLLKMLPKCHELKY 431
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVK 287
KK + + +N I + G L +++ M P+L TY L+ + G ++
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
A+ ++E N +PD Y+TL++G C + A + +M +G P Y LL
Sbjct: 847 SAIDLFEGTNC---EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
L + EA ++ + MA + + LI+ L + + A LF + + G+
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 145 LLQPGCTPL--IYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSN 202
++ GCTPL YNS++ + N I S+ + EL + ++
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL------------DFVPDVDTY 550
Query: 203 SIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
I N+L +K D F + M++ G Y+ I + G G + + F
Sbjct: 551 LIVVNELC---KKNDRDAAFAII--DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 263 HQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
+M PD Y +I+ + G++ +A + E++ +P FTYT LI G K
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKM 665
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
++ + ++M +G P ++Y +L+ K + LF M + +K Y
Sbjct: 666 GMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAY 725
Query: 379 NILIHGL 385
L+ GL
Sbjct: 726 ITLLSGL 732
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 213/535 (39%), Gaps = 46/535 (8%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVW 293
D + I +HA W D A LF +M PD TY+ LI+ + G+ + A+ +
Sbjct: 144 DIYNMMIRLHARHNWVDQARG--LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
+D+ A P TY LI C + A + +M +NG P + +N +L
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV--DGI 411
+ S+A FE M V+ T+NI+I+ L K G+ A LF +++K D +
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
T++ I+ G ++V+ +LM HG ++ +
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 472 REGDLVPKVLRWKAGMEASIKN-PPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
++ ++P V+ + + + ++ P K K+ M + + N+ +++
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE------------RRKPNVVTYN 429
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVN--TF 588
I+ Y S F + +Q D ++V+ T
Sbjct: 430 ALID-----------------------AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
L+ K + G++ + YNS + S++ +A A+ M +K
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
AD T+ ++I G ++ + A + L + L +Y++++ A K G++ E
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F QMK +G PDV+ Y +++ ++ + A + M G P+ + + L
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/569 (19%), Positives = 227/569 (39%), Gaps = 26/569 (4%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+N L+ A + E +V K+ D G D +NI + A+ + + S F M
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNA--CAHQPDHFTYTTLIQGCCKTY 319
G PD T+N +I L KLG+ AL ++ + +PD T+T+++
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+I++ +F M G +P + YN+L+ A + + Q G+ +Y
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
L++ ++ +P A +F ++K+ + + +TY+ ++
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G ++V++ +L+ + + D ++ + + + + + + I +K
Sbjct: 455 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 500 D--YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
Y M K + + S + + I S M+ L+ +
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI--------SYLKEMEDLSIPLTKE 566
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMV---------NTFLSIFLAKGKLSLACKLFEIF 608
Y+S L + +V + S + M + L + A K AC+LF
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
G++P S +++M +F K G + + ++ M EK P A + I +
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 686
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A ++ + L I + N +++ GK+G+++ + K F ++ +SG+ ++ TY L
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAIL 746
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
+E G + + L+ M AG P++
Sbjct: 747 LEHLLAVGNWRKYIEVLEWMSGAGIQPSN 775
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 24/304 (7%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLR 164
IKQ+ ++ S+ LL+S S + ++ + ++ +P + YN+L+ A
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNV--VTYNALIDAYGS 437
Query: 165 NNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
N + A IF ++ + N ++ LL A ++ K+
Sbjct: 438 NGFLAEAVEIFRQMEQ----------------DGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
V +G L+T YN I ++ +L + +L+ M D T+ LIS
Sbjct: 482 VLSA-AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
C++ K +A+ +++ + Y++++ K ++ A IFNQM G P
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
I Y S+L + K +AC+LF +M G++ + L+ K G+P + L
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 660
Query: 401 LKKK 404
+++K
Sbjct: 661 MREK 664
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/638 (18%), Positives = 241/638 (37%), Gaps = 66/638 (10%)
Query: 109 AVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP-LIYNSLLIASLRNNH 167
A+ ++N L+++ S N+ E L++ + + G P L+ +++++++ ++
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWREALEVC-----KKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 168 IPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFH 227
+S L EL + ++ FN ++ L K + +F+
Sbjct: 263 ---QYSKALSYFELMK------------GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 228 KLMDKKGFAL-DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCK 282
+ +K+ D + +H + G++ ++F M P++ +YN L+
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
G AL V D+ PD +YT L+ ++ + A +F M +P +
Sbjct: 368 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 427
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN+L+D ++EA ++F +M Q+G+K + + L+ ++ + T+ +
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
+G ++ Y+ + + D VT T L+ G
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG-------- 539
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGME-ASIKNPPSKKKDYSPM---FPSKGDFSEIMSIL 518
+ R+ K+ P+ + + ME SI P K+ YS + + +G +E SI
Sbjct: 540 -SCRMSKY-------PEAISYLKEMEDLSI---PLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
+ K+ E D + + + N + G A +LF ++
Sbjct: 589 ----------NQMKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEP---- 633
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
D + + F G+ S L ++ E + + I S+ + A
Sbjct: 634 --DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 691
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+I M L I N ++ GK G+ + + +++ G +++ Y L+ L
Sbjct: 692 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
G + + E M +GI P Y +I ++
Sbjct: 752 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSA 789
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
D+ N + + + A LF + P + TY++++++ + G + A ++ +
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
M +TYN +I G G A + ++ G D+V +N +++A +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD--AGCTPNHVTD 760
+ +FE MK + + PD T+N +I SK G A M + A C P+ VT
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 761 TTLDYL 766
T++ +L
Sbjct: 324 TSIMHL 329
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/533 (21%), Positives = 217/533 (40%), Gaps = 42/533 (7%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVW 293
D + I +HA W D A LF +M PD TY+ LI+ + G+ + A+ +
Sbjct: 12 DIYNMMIRLHARHNWVDQARG--LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 69
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
+D+ A P TY LI C + A + +M +NG P + +N +L
Sbjct: 70 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 129
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV--DGI 411
+ S+A FE M V+ T+NI+I+ L K G+ A LF +++K D +
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
T++ I+ G ++V+ +LM HG ++ +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 472 REGDLVPKVLRWKAGMEASIKN-PPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
++ ++P V+ + + + ++ P K K+ M + + N+ +++
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE------------RRKPNVVTYN 297
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS 590
I D G L+ ++ + Q++ G + + + ++D V
Sbjct: 298 ALI-DAYGSNGFLAEAVE-IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV----- 350
Query: 591 IFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
LS A G++ + YNS + S++ +A A+ M +K A
Sbjct: 351 -------LSAA-------QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 396
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D T+ ++I G ++ + A + L + L +Y++++ A K G++ E F
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
QMK +G PDV+ Y +++ ++ + A + M G P+ + + L
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/569 (19%), Positives = 227/569 (39%), Gaps = 26/569 (4%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+N L+ A + E +V K+ D G D +NI + A+ + + S F M
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNA--CAHQPDHFTYTTLIQGCCKTY 319
G PD T+N +I L KLG+ AL ++ + +PD T+T+++
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+I++ +F M G +P + YN+L+ A + + Q G+ +Y
Sbjct: 203 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
L++ ++ +P A +F ++K+ + + +TY+ ++
Sbjct: 263 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 322
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G ++V++ +L+ + + D ++ + + + + + + I +K
Sbjct: 323 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 500 D--YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
Y M K + + S + + I S M+ L+ +
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI--------SYLKEMEDLSIPLTKE 434
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMV---------NTFLSIFLAKGKLSLACKLFEIF 608
Y+S L + +V + S + M + L + A K AC+LF
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
G++P S +++M +F K G + + ++ M EK P A + I +
Sbjct: 495 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 554
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A ++ + L I + N +++ GK+G+++ + K F ++ +SG+ ++ TY L
Sbjct: 555 KRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAIL 614
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
+E G + + L+ M AG P++
Sbjct: 615 LEHLLAVGNWRKYIEVLEWMSGAGIQPSN 643
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 116/638 (18%), Positives = 241/638 (37%), Gaps = 66/638 (10%)
Query: 109 AVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP-LIYNSLLIASLRNNH 167
A+ ++N L+++ S N+ E L++ + + G P L+ +++++++ ++
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVC-----KKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 168 IPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFH 227
+S L EL + ++ FN ++ L K + +F+
Sbjct: 131 ---QYSKALSYFELMK------------GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 228 KLMDKKGFAL-DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCK 282
+ +K+ D + +H + G++ ++F M P++ +YN L+
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
G AL V D+ PD +YT L+ ++ + A +F M +P +
Sbjct: 236 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 295
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN+L+D ++EA ++F +M Q+G+K + + L+ ++ + T+ +
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
+G ++ Y+ + + D VT T L+ G
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG-------- 407
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGME-ASIKNPPSKKKDYSPM---FPSKGDFSEIMSIL 518
+ R+ K+ P+ + + ME SI P K+ YS + + +G +E SI
Sbjct: 408 -SCRMSKY-------PEAISYLKEMEDLSI---PLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
+ K+ E D + + + N + G A +LF ++
Sbjct: 457 ----------NQMKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEP---- 501
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
D + + F G+ S L ++ E + + I S+ + A
Sbjct: 502 --DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 559
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+I M L I N ++ GK G+ + + +++ G +++ Y L+ L
Sbjct: 560 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
G + + E M +GI P Y +I ++
Sbjct: 620 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSA 657
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 24/304 (7%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLR 164
IKQ+ ++ S+ LL+S S + ++ + ++ +P + YN+L+ A
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNV--VTYNALIDAYGS 305
Query: 165 NNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
N + A IF ++ + N ++ LL A ++ K+
Sbjct: 306 NGFLAEAVEIFRQMEQ----------------DGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
V +G L+T YN I ++ +L + +L+ M D T+ LIS
Sbjct: 350 VLSA-AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
C++ K +A+ +++ + Y++++ K ++ A IFNQM G P
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
I Y S+L + K +AC+LF +M G++ + L+ K G+P + L
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 528
Query: 401 LKKK 404
+++K
Sbjct: 529 MREK 532
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
D+ N + + + A LF + P + TY++++++ + G + A ++ +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
M +TYN +I G G A + ++ G D+V +N +++A +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD--AGCTPNHVTD 760
+ +FE MK + + PD T+N +I SK G A M + A C P+ VT
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 761 TTLDYL 766
T++ +L
Sbjct: 192 TSIMHL 197
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 209/508 (41%), Gaps = 82/508 (16%)
Query: 258 SFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+ +LF M P P + ++ L+ + KL K + + ++ L D +++TTLI
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
C+ ++ A +M GF P + + SL++ + EA L +++ G +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
+ YN +I L + G+ A + +KK G D +TY+
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN------------------- 223
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
SL+ + G W + R++ + + P V+ + A ++ K
Sbjct: 224 ----------------SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKE 267
Query: 494 PP--SKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
KK Y+ M S + N+ ++++ I L K+
Sbjct: 268 GQLLEAKKQYNEMIQR-------------SVNPNIVTYNSLINGLC--IHGLLDEAKKVL 312
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
N + S G+ T NT ++ + ++ K+ + +
Sbjct: 313 NVLVSKGFFPNAVT-------------------YNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL---GKIGRA 668
GVD ++TYN++ + + G F+ A ++ M D+ T+N+++ GL GKIG+A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
+ L+ L K + I+ YN +I L KA ++++ F + G++PDV+TY T+
Sbjct: 414 LVR---LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 729 IEVHSKAGLLKDAYK-FLKMMLDAGCTP 755
+ + L ++A++ + KM + G P
Sbjct: 471 MIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A L + G +P YN+I+ S +KG N A ++ M + D+ TYN +I
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
L G +++ IL +++ G D++ ++ LI+ GK G++ E K + +M +NP
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++VTYN+LI GLL +A K L +++ G PN VT TL
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N+ ++ G ++ ++ G+ P T+++++ + K+G EA
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM ++ +I TYN +I GL G D A +L+ L+ +G + + V YNTLIN KA
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
R+D+ K M G++ D TYNTL + + +AG A K L M+ G P+ T
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
S D+ T + F +LSLA + G +P T+ S+++ F F EA +
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
++ ++ ++ YN II L + G+ + A +L + K G D+V YN+LI L
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
+G + M GI+PDV+T++ LI+V+ K G L +A K M+ PN V
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 759 TDTTL 763
T +L
Sbjct: 291 TYNSL 295
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
++ + NT + KG+++ A + + + G+ P TYNS+++ G + + I+
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
++M D+ T++ +I GK G+ A + ++++ +IV YN+LIN L
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G +DE K + S G P+ VTYNTLI + KA + D K L +M G + T
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 761 TTL 763
TL
Sbjct: 363 NTL 365
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/444 (18%), Positives = 172/444 (38%), Gaps = 32/444 (7%)
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K + A +F M + P + ++ LL + K K LF + G+ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
LI + R A + + K G +T+ +V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G+ ++V +++ + + G+ + ++KH+++ + P V+ + + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI------------ 226
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+ +F S G + IL+ +SP + + + G
Sbjct: 227 --TRLFHS-GTWGVSARILSDMM-----------------RMGISPDVITFSALIDVYGK 266
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
QL + S + +I N+ ++ G L A K+ + G P + T
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
YN++++ + K ++ I+ M D TYN + QG + G+ A +L R++
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
G + D+ +N L++ L G+I + E ++ S ++TYN +I+ KA ++
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
DA+ + G +P+ +T T+
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITM 470
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 589 LSIFLAK-GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
L I +AK K LF G+ Y++ +++ F + + A + + +M +
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
I T+ ++ G + R A +++D+++ G ++V+YNT+I++L + G+++
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL-DYL 766
+ MK GI PDVVTYN+LI +G + + L M+ G +P+ +T + L D
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 767 GREIDKLRYQK 777
G+E L +K
Sbjct: 265 GKEGQLLEAKK 275
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ F++LL+A+ K + K E + ++ G + D + + I F L+ + S
Sbjct: 80 VDFSRLLIAIAKLN-KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLG 138
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M P + T+ L++ C + + +A+ + + + ++P+ Y T+I C+
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF---------------------------- 351
+++ A + M G RP + YNSL+ LF
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 352 -------KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
K ++ EA + + +M Q V + TYN LI+GL +G + A + L K
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 405 GQFVDGITYSIIV 417
G F + +TY+ ++
Sbjct: 319 GFFPNAVTYNTLI 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N N + +N L+ L + E ++V + L+ K GF + YN I+ + +
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK-GFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 260 SLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+ M D TYN L C+ GK A V + +C PD +T+ L+ G
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C KI A + + G I YN ++ L KA KV +A LF +A +GV
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
TY ++ GL + A+ L+ ++K+
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKE 493
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/534 (20%), Positives = 212/534 (39%), Gaps = 79/534 (14%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISV 279
+VF + M +G + + Y I+A+G G TS L +M P + TYN +I+
Sbjct: 162 EVFDE-MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA 220
Query: 280 LCKLGKVKDALI-VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
+ G + L+ ++ ++ QPD TY TL+ C D A +F M++ G P
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
Y+ L++ K ++ + C L +MA G +YN+L+ K+G + A +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
++ G + TYS+ L+ +
Sbjct: 341 HQMQAAGCTPNANTYSV-----------------------------------LLNLFGQS 365
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
GR+D +L ++ + P + +E +F G F E++++
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIE---------------VFGEGGYFKEVVTLF 410
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSD 578
HD E+ + P M+ + + G +++ Q +
Sbjct: 411 ----------HDMVEEN-------IEPDMETYEGIIFACGKGG---LHEDARKILQYMTA 450
Query: 579 SFDIDMVNTFLSIFLAKGKLSL---ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
+ + + + A G+ +L A F E G +P T++S++ SF + G E
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
+ AI++ + + P + T+N I+ + G+ + A + K D +++
Sbjct: 511 SEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
A +DE + FE+MK+S I P ++ Y ++ V+ K D + L+ ML
Sbjct: 571 VYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/524 (19%), Positives = 193/524 (36%), Gaps = 44/524 (8%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP-----GPDLCTYNCLISVLCKLGKVKDALIVWEDL 296
+ + F GD S LF M P+ Y +IS+L + G + L V++++
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+ F+YT LI + + + + + ++M N P + YN++++ +
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 357 SEA-CQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
E LF +M EG++ TYN L+ G + A +F + G D TYS
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 416 IVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGD 475
+V G + D+ + L+ K G + ++
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 476 LVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIED 535
P + + +F G + ++ + + +N D
Sbjct: 348 CTPNANTYSVLLN---------------LFGQSGRYDDVRQLFLEMKSSNTDPD------ 386
Query: 536 EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAK 595
+ + L GY ++ T ++ + DM T+ I A
Sbjct: 387 --------AATYNILIEVFGEGGYFKEVVT-----LFHDMVEENIEPDM-ETYEGIIFAC 432
Query: 596 GKLSL---ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
GK L A K+ + T + P S Y ++ +F + + EA M E I
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
T++ ++ + G + AIL RL+ G + +N I A + G+ +E K +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
M+ S +PD T ++ V+S A L+ + + + M + P+
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPS 596
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 186/484 (38%), Gaps = 46/484 (9%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+P+ YT +I + +D +F++M + G Y +L++ + + + +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRP-EAAYTLFCDLKKKGQFVDGITYSIIVLQX 420
L ++M E + S TYN +I+ + G E LF +++ +G D +TY+ ++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 421 XXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
G V DL T + L+ K R + L+ + G +P +
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 481 LRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE 540
+ +EA + G E M + Q A + +
Sbjct: 318 TSYNVLLEA---------------YAKSGSIKEAMGVFHQMQAAGCTPN--------ANT 354
Query: 541 WSLSPHMDKLANQVKSSGY---ASQLFTPTPGQRVQQKGSDSF-DIDMVNTFLSIFLAKG 596
+S+ L N SG QLF ++ K S++ D N + +F G
Sbjct: 355 YSV------LLNLFGQSGRYDDVRQLF-------LEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATY 655
LF E ++P TY I+ + K G +A I+ M + P+ A Y
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA-Y 460
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+I+ G+ + A + + + G I +++L+ + + G + E ++
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDY--LGREIDK 772
SGI + T+N IE + + G ++A K M + C P+ T + L R +D+
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Query: 773 LRYQ 776
R Q
Sbjct: 581 CREQ 584
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 21/253 (8%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALR 214
YN LL A ++ I A +F ++ A N+N+ S+ N + R
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQM------------QAAGCTPNANTYSVLLNLFGQSGR 367
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDL 270
D++ F ++ D D YNI I FG G +LFH M PD+
Sbjct: 368 YDDVRQLFLEMKSSNTDP-----DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
TY +I K G +DA + + + A P YT +I+ + + A FN
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
MH G P ++SLL + V E+ + ++ G+ + T+N I + G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 391 PEAAYTLFCDLKK 403
E A + D++K
Sbjct: 543 FEEAVKTYVDMEK 555
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
++N LL A K+ E VFH+ M G + Y++ ++ FG G LF +
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQ-MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M PD TYN LI V + G K+ + ++ D+ +PD TY +I C K
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ A +I M N P + Y +++ +A EA F M + G S +T++
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ + G + + + L G
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSG 522
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT-YNSIMSSFVKKGY 632
+KG S+D++ + LS +G ++ +F+ + +S + + F +G
Sbjct: 68 EKGKYSYDVESLINKLSSLPPRGSIARCLDIFK-------NKLSLNDFALVFKEFAGRGD 120
Query: 633 FNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
+ + + M ++ C + Y ++I LG+ G D + D + QG + Y
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL-LKDAYKFLKMMLD 750
LINA G+ GR + + ++MK+ I+P ++TYNT+I ++ GL + M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 751 AGCTPNHVTDTTL 763
G P+ VT TL
Sbjct: 241 EGIQPDIVTYNTL 253
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 212/534 (39%), Gaps = 54/534 (10%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLG 284
LM ++G ++ + ++ G L + + M P+L N I V +
Sbjct: 232 LMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN 291
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+++ AL E + P+ TY +I+G C ++++ A + MH+ G P + Y
Sbjct: 292 RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 345 SLLDVLFKATKVSEACQLFEKMAQE-GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
+++ L K ++ E L +KMA+E G+ TYN LIH L K+ + A D ++
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV-VDLVTITSLMVGIHKHGRWD 462
KG +D + YS IV +G D+VT T+++ G + G D
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS-KKKDYSPM------FPSKGDFSEIM 515
+L++ + P + + A + + S + ++ M P+ +S IM
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 516 SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQK 575
L E LS D + V F P P +
Sbjct: 532 HGLR-------------------REGKLSEACDVVREMVLKG------FFPGPVE----- 561
Query: 576 GSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
+N L G+ A K E G + +++ F + +
Sbjct: 562 ---------INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
A +++ +M AD+ TY ++ LGK GR A+ ++ ++L +G V Y T+I+
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
+ G++D++ E+M S + YN +IE G L++A L +L
Sbjct: 673 RYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVL 724
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 6/289 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ + +N L+ L K D E F K +KGF +D GY+ +HA G ++ + L
Sbjct: 382 DQVTYNTLIHMLTKHDHADE-ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 262 FHQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
++M PD+ TY +++ C+LG+V A + + ++ H+P+ +YT L+ G C
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+T K A + N + + P +I Y+ ++ L + K+SEAC + +M +G
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXX 436
N+L+ L ++GR A + KG ++ + ++ ++
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 437 XXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
D+ T T+L+ + K GR LMK + + P + ++
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 172/446 (38%), Gaps = 42/446 (9%)
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A ++ M G P ++ N+ +DV +A ++ +A + E+M G+ + TYN +I
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITY-SIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
G R E A L D+ KG D ++Y +I+ G V
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 380
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP-SKKKDY 501
D VT +L+ + KH D +K +E L + A + A K S+ KD
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 502 SPMFPSKG----DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
SKG D +++ G L D KL + +
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGF--CRLGEVDKA---------------KKLLQVMHTH 483
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
G+ + T L+ GK A ++ + E P S
Sbjct: 484 GHKPNTVSYT-------------------ALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
TY+ IM ++G +EA ++ EM K N+++Q L + GR A ++
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
L +G +++V + T+I+ + +D + M + DV TY TL++ K G
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 644
Query: 738 LKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ +A + +K ML G P VT T+
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTV 670
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 175/425 (41%), Gaps = 29/425 (6%)
Query: 63 LHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLH 122
L FF W P Y +L LS+ +K+ + P++F+ ++
Sbjct: 191 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELF 182
S + + L++L + QR ++P LI N+ + +R N + A FL+ +++
Sbjct: 251 SYSRAGQLRDALKVLT-LMQRAGVEPNL--LICNTTIDVFVRANRLEKALR-FLERMQVV 306
Query: 183 XXXXXXXXXXAAL-----------------DSNSNS---NSIAFNQLLVALRKADMKLEF 222
+ D +S + +++ ++ L K +E
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEV 366
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGC--WGDLATSFSLFHQMPG--PDLCTYNCLIS 278
+ + K+ + G D YN IH D A F Q G D Y+ ++
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVH 426
Query: 279 VLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR 337
LCK G++ +A + ++ + H PD TYT ++ G C+ ++D A ++ MH +G +
Sbjct: 427 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
P T+ Y +LL+ + + K EA ++ + + TY++++HGL + G+ A +
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 398 FCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHK 457
++ KG F + ++++ +G +++V T+++ G +
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 458 HGRWD 462
+ D
Sbjct: 607 NDELD 611
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+L A K+ + AGV+P N+ + FV+ +A + M ++ TY
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-K 714
N +I+G + R + A +L+ + +G D V Y T++ L K RI EV ++M K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
G+ PD VTYNTLI + +K +A FLK + G
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKG 413
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++++ LL + + LE +++ + + ++ ++ ++ Y++ +H G L+ + +
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 262 FHQM------PGPDLCTYNCLISVLCKLGKVKDALIVWED-LN-ACAHQPDHFTYTTLIQ 313
+M PGP N L+ LC+ G+ +A E+ LN CA + +TT+I
Sbjct: 547 VREMVLKGFFPGP--VEINLLLQSLCRDGRTHEARKFMEECLNKGCA--INVVNFTTVIH 602
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G C+ ++D A + + M+ Y +L+D L K +++EA +L +KM +G+
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 374 SCQTYNILIHGLIKNGR 390
+ TY +IH + G+
Sbjct: 663 TPVTYRTVIHRYCQMGK 679
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E G+ P TYN+++ K + +EA + + EK D Y+ I+ L K GR
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 670 LASAILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A +++ +L +G D+V Y ++N + G +D+ K + M + G P+ V+Y L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKL 773
+ + G +A + + M + +PN +T + + + R KL
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 593 LAKGKLSLACK-LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
L+K KL + + + G+ ++ +M S+ + G +A ++T M +
Sbjct: 217 LSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPN 276
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ N I + R + A L+R+ G ++V YN +I R++E + E
Sbjct: 277 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLE 336
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML-DAGCTPNHVTDTTLDYL 766
M S G PD V+Y T++ K + + +K M + G P+ VT TL ++
Sbjct: 337 DMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
DP+ Y S++ K + ++ M + ++ ++ + G+ A
Sbjct: 206 DPM--VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+L + + G ++++ NT I+ +A R+++ +F E+M+ GI P+VVTYN +I +
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGRE 769
+++A + L+ M GC P+ V+ T + YL +E
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ + KKG EA ++ +M K TY +I ++G+ D AIL++
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEK 689
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
++ + I YN +I L G+++E + ++ + D T L+E + K G+
Sbjct: 690 MISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747
Query: 738 LKDAYKFLKMMLDAGCTPN 756
AYK M + P+
Sbjct: 748 PLSAYKVACRMFNRNLIPD 766
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 220/538 (40%), Gaps = 74/538 (13%)
Query: 221 EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG-DLATSFSLFHQMP-----GPDLCTYN 274
E ++F + K GF LD+ + F C G +L + +F M P+ +Y+
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGF-CRGLNLRDALKVFDVMSKEVTCAPNSVSYS 270
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
LI LC++G++++A + + + QP TYT LI+ C ID A +F++M
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
G +P Y L+D L + K+ EA + KM ++ + S TYN LI+G K+GR A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
+ L ++K+ + T++ ++ G D+V+ L+ G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 455 IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ + G + +L+ + D+ P L + A + A K K D +
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ-------------GKADVASA 497
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
L + +L DE + + +D + K+ L T + +
Sbjct: 498 FLGLMLRKGISL------------DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
S + +DM++ + K +L++ K+ + G+ P TY +++ ++ G
Sbjct: 546 PHSLNVILDMLSKGCKV---KEELAMLGKI----NKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
++ I+ M C ++ Y +II GL + GR
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGR--------------------------- 631
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
++E K M+ SG++P+ VTY +++ + G L A + ++ M++ G
Sbjct: 632 --------VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 217/530 (40%), Gaps = 35/530 (6%)
Query: 251 CWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
C+ +L F P Y+ L+ L KL A + + + A Y T
Sbjct: 146 CFDELREVFGFRLNYP-----CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRT 200
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
++ CK + A +++ GF + + SLL + + +A ++F+ M++E
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260
Query: 371 VKA-SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
A + +Y+ILIHGL + GR E A+ L + +KG TY++++
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
RG ++ T T L+ G+ + G+ + + + + + + + P V+ + A
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA---- 376
Query: 490 SIKNPPSKKKDYSPMF------------PSKGDFSEIMSILTGSQDANLDSHDTKIEDEE 537
+ N K P F P+ F+E+M L H K +
Sbjct: 377 -LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 538 GDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDID----MVNTFLSIFL 593
G LSP D ++ V G + T + + + FDI+ ++ F
Sbjct: 436 G----LSP--DIVSYNVLIDGLCREGHMNTAYKLLSSM--NCFDIEPDCLTFTAIINAFC 487
Query: 594 AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIA 653
+GK +A + G+ T +++ K G +A I+ + +
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
+ N+I+ L K + A+L ++ K G +V Y TL++ L ++G I + E M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K SG P+V Y +I + G +++A K L M D+G +PNHVT T +
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+L A L + E G P + TY ++ + +G ++A+ + EM + C ++ TY
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
++I GL + G+ + A+ + +++K + ++ YN LIN K GR+ + M+
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGRE 769
P+V T+N L+E + G A LK MLD G +P+ V+ + +D L RE
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 33/329 (10%)
Query: 92 PAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCT 151
PAF + K + ++FN L+ L ++ + +L + +L G +
Sbjct: 389 PAFELLTVMEKRACKPNV-----RTFNELMEGLCRVGKPYKAVHLL-----KRMLDNGLS 438
Query: 152 PLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQL 209
P I YN L+ R H+ A+ + L + F + + + F +
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKL-LSSMNCF---------------DIEPDCLTFTAI 482
Query: 210 LVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPD 269
+ A K K + F LM +KG +LD I G + + +
Sbjct: 483 INAFCKQG-KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 270 LCT----YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHAT 325
+ T N ++ +L K KVK+ L + +N P TYTTL+ G ++ I +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 326 RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
RI M +G P Y +++ L + +V EA +L M GV + TY +++ G
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 386 IKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
+ NG+ + A + ++G ++ YS
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYS 690
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 126/645 (19%), Positives = 243/645 (37%), Gaps = 87/645 (13%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
S++ L+H L E + D + ++ GC P Y L+ A I AF+
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEK-----GCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++I N + L+ L + E V K++ +
Sbjct: 323 LFDEMIP----------------RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
F YN I+ + G + +F L M P++ T+N L+ LC++GK A
Sbjct: 367 IFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + + + PD +Y LI G C+ ++ A ++ + M+ P + + ++++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K K A M ++G+ T LI G+ K G+ A + L K
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMK 469
+ ++I+ G V +VT T+L+ G+ + G + R+++
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 470 HVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLD-S 528
++ +P V + + G E +L+ QD+ + +
Sbjct: 606 LMKLSGCLPNVYPYTIIING---------------LCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKS---SGYA--SQLFTP-TPGQRVQQKGSDS--- 579
H T +G + + +D+ V++ GY ++++ G + QKG D+
Sbjct: 651 HVTYTVMVKG--YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 580 ----------FDIDMVNTFLS-------------IFLA-----KGKLSLACKLFEIFTEA 611
D + +N +S IFL +G+ + L + E
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
GV + + IM S+ K + +IT + + ++ ++IQGL K G A+ A
Sbjct: 769 GV-FLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Query: 672 SAILDRLLKQGGYLD---IVMYNTLINALGKAGRIDEVNKFFEQM 713
++ LL G ++ ++ Y + + G EV +Q+
Sbjct: 828 RELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++ + G++ A +L + + P T+N +M + G +A ++ M +
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
DI +YN++I GL + G + A +L + D + + +INA K G+ D
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC-TPNHVTDTTLD 764
+ F M GI+ D VT TLI+ K G +DA L+ ++ T H + LD
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 765 YLGR 768
L +
Sbjct: 555 MLSK 558
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 126/590 (21%), Positives = 227/590 (38%), Gaps = 88/590 (14%)
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDL 270
K M +F F K++ +KGF NI + + + +++ M P +
Sbjct: 180 KKSMAEKFLLSFEKMI-RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
T+N ++ K G ++ +W ++ + TY LI G K K++ A R
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M +GF +N L++ K +A + ++M G+ + TYNI I L GR
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 391 PEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
+ A L + D+V+ +
Sbjct: 359 IDDARELLSSMAAP---------------------------------------DVVSYNT 379
Query: 451 LMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA-----SIKNPPSKKKDYSP-- 503
LM G K G++ L +R GD+ P ++ + ++ +++ K++ +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 504 MFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL 563
+FP ++ ++ ++ NL S T++ DE L +K GYA
Sbjct: 440 IFPDVITYTTLVKGFV--KNGNL-SMATEVYDE------------MLRKGIKPDGYAYT- 483
Query: 564 FTPTPGQRVQQKGSDSF--------------DIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
T G+ +F D+ + N + G L A +
Sbjct: 484 -TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
G+ P TY +++ +++ G F A + EM K + TY ++I G K GR +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + K+G +++ +N L+ + KAG IDE ++ +M+ GI P+ +Y LI
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL------DYLGREIDKL 773
+ ++ K K MLD P+ T L D+ RE++ L
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 37/322 (11%)
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL-------------------D 238
N + + +N L+ K + K+E + FH M + GFA+ D
Sbjct: 268 NIEFSEVTYNILINGFSK-NGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 239 TWG----------------YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCK 282
WG YNI I A +G + + L M PD+ +YN L+ K
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK 386
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
+GK +A ++++DL A P TY TLI G C++ ++ A R+ +M P I
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
Y +L+ K +S A +++++M ++G+K Y G ++ G + A+ L ++
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 403 KKGQFVDGIT-YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+T Y++ + G V D VT T+++ G ++G++
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 462 DWTDRLMKHVREGDLVPKVLRW 483
L + L P V+ +
Sbjct: 567 KMARNLYDEMLRKRLYPSVITY 588
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++ F GK+ A + +G Y++N ++ + K+G F++AW + EM
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRL---------------LKQGGYLD---- 686
+TYN+ I L GR D A +L + +K G +++
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 687 ------------IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
IV YNTLI+ L ++G ++ + E+M + I PDV+TY TL++ K
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
G L A + ML G P+ TT R + +LR
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTT-----RAVGELR 491
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVN----TFLSIFLAKGKLSLACKLFEIFTEAGV 613
GY ++ P RV K D FD D T L+I + + +L+LA K ++ E G+
Sbjct: 95 GYG-RVHRPFDSLRVFHKMKD-FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGL 152
Query: 614 DPVSYTYNSIMSSFVKK-GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
P + N ++ + + G + I EM ++ C D TY +I GL + GR D A
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+ ++++ +V Y +LIN L + +DE ++ E+MKS GI P+V TY++L++
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K G A + +MM+ GC PN VT TTL
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD--LATSFSLFHQMP 266
L + + + + L F+ F+K M + G N+ I A C D + +F +MP
Sbjct: 128 LAILVEENQLNLAFK--FYKNMREIGLPPTVASLNVLIKAL-CRNDGTVDAGLKIFLEMP 184
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
PD TY LIS LC+ G++ +A ++ ++ P TYT+LI G C + +D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A R +M + G P Y+SL+D L K + +A +LFE M G + + TY LI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
GL K + + A L + +G D Y ++
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 125/290 (43%), Gaps = 10/290 (3%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+ N L+ AL + D ++ M K+G D++ Y I +G + + LF +
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 265 MP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M P + TY LI+ LC V +A+ E++ + +P+ FTY++L+ G CK +
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A +F M G RP + Y +L+ L K K+ EA +L ++M +G+K Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI------IVLQXXXXXXXXXXXXXXX 434
+I G + A ++ G + +T++I V++
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL 397
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWK 484
RG V++ T+ SL+ + K G + +L+ + +P WK
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWK 447
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G + K+F + G DP SYTY +++S + G +EA + TEM EK C + TY
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+I GL D A L+ + +G ++ Y++L++ L K GR + + FE M +
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
G P++VTY TLI K +++A + L M G P+
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 9/257 (3%)
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEG---DEWSLSPHMDKLANQVKSSGYASQ 562
PS+ + +++IL NL K E G SL+ + L + +
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
+F P ++G D D T +S G++ A KLF E P TY S
Sbjct: 179 IFLEMP-----KRGCDP-DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+++ +EA + EM K ++ TY+ ++ GL K GR+ A + + ++ +G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
++V Y TLI L K +I E + ++M G+ PD Y +I ++A
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 743 KFLKMMLDAGCTPNHVT 759
FL M+ G TPN +T
Sbjct: 353 NFLDEMILGGITPNRLT 369
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A + E G++P +TY+S+M K G +A + M + C ++ TY +I
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL K + A +LDR+ QG D +Y +I+ + E F ++M GI P
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 721 DVVTYN 726
+ +T+N
Sbjct: 366 NRLTWN 371
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 92/213 (43%), Gaps = 3/213 (1%)
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
K + LIV + C D ++ +G + ++ + R+F++M + P Y
Sbjct: 68 KAAEDLIVRMKIENCVVSED--ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN-GRPEAAYTLFCDLKK 403
++L +L + +++ A + ++ M + G+ + + N+LI L +N G +A +F ++ K
Sbjct: 126 TVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
+G D TY ++ + +VT TSL+ G+ D
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPS 496
R ++ ++ + P V + + M+ K+ S
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 274 NCLIS-----VLCK-LGKVK---DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHA 324
NC++S +C+ G+V D+L V+ + P Y T++ + +++ A
Sbjct: 81 NCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLA 140
Query: 325 TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEA-CQLFEKMAQEGVKASCQTYNILIH 383
+ + M G P N L+ L + +A ++F +M + G TY LI
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLIS 200
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
GL + GR + A LF ++ +K +TY+ ++ +G
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 444 DLVTITSLMVGIHKHGR 460
++ T +SLM G+ K GR
Sbjct: 261 NVFTYSSLMDGLCKDGR 277
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 29/337 (8%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLR 164
+K+D VV + ++ L+ + + + ++ D +++R + +Y SL+ + R
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD---VHVYTSLISWNCR 341
Query: 165 NNHIPLAFSIFLKLIE------------LFXXXXXXXXXXAA-------LDSNSNSNSIA 205
++ AF +F +L E L AA N +
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG--DLATSFSLFH 263
FN L+ + M E ++ +M++KGF D + N F D A + LF
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYD-VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW-LFR 459
Query: 264 QMPGP---DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M G +Y LI V CK G V++A ++ ++++ QP+ TY +I CK K
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I A ++ M NG P + Y SL+ A V EA +LF +M +G+ + TY +
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+I GL K G+ + A+ L+ ++K+KG +D Y+ ++
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 193/472 (40%), Gaps = 36/472 (7%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM--PGPDLCTYNCLISV--LCKLGK 285
M KKG ++D + + A + +F +M G + Y+ I V LC+ G+
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V+ + + ++ + +P+ +TY T+I K + M +G + Y
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+++ K K+S+A +LF++M + G+++ Y LI + G + A+ LF +L +KG
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
TY ++ +G + V +L+ G + G D
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD--- 416
Query: 466 RLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDAN 525
E ++ V+ K G +A + + ++ + + ++ G +
Sbjct: 417 -------EASMIYDVMEQK-GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 526 LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV 585
S+ I D + ++++ A +LF + VQ
Sbjct: 469 TVSYTNLI-----DVYCKEGNVEE----------AKRLFVEMSSKGVQPNAI------TY 507
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + +GK+ A KL G+DP SYTY S++ +EA + +EMG
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
K + TY ++I GL K G++D A + D + ++G +D +Y LI ++
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 168/415 (40%), Gaps = 71/415 (17%)
Query: 386 IKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDL 445
+ NG E +F + KKG +D + + ++ G + +
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224
Query: 446 VTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF 505
++T ++ G+ + G + + +L+K + P+ + + A +K
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK------------- 271
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY--ASQL 563
+ DFS + +L K+ ++G ++ + + VK+ A +L
Sbjct: 272 --QRDFSGVEGVL-------------KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY--- 620
F ++++G +S D+ + + +S KG + A LF+ TE G+ P SYTY
Sbjct: 317 F-----DEMRERGIES-DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 621 --------------------------------NSIMSSFVKKGYFNEAWAIITEMGEKLC 648
N+++ + +KG +EA I M +K
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
AD+ T N I ++ R D A L R+++ G L V Y LI+ K G ++E +
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M S G+ P+ +TYN +I + K G +K+A K M G P+ T T+L
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 9/270 (3%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW-GDLATSFSLFHQMP- 266
LL+ L + K+ + M ++G D Y I ++ C G++ +F LF ++
Sbjct: 299 LLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI-SWNCRKGNMKRAFLLFDELTE 357
Query: 267 ---GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
P TY LI +CK+G++ A I+ ++ + + TLI G C+ +D
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A+ I++ M GF+ N++ + + EA Q +M + GVK S +Y LI
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
K G E A LF ++ KG + ITY++++ G
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVRE 473
D T TSL IH D D M+ E
Sbjct: 538 DSYTYTSL---IHGECIADNVDEAMRLFSE 564
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 169/445 (37%), Gaps = 38/445 (8%)
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
+ R+F+ M G L K ++ ++F +M GVK + + I+
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
+ GL + G E + L + KG + TY+ I+ G
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
V + VT T LM K+G+ ++L +RE G+E+ + Y
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE-----------RGIESDVHV-------Y 332
Query: 502 SPMFP---SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
+ + KG+ + + L ++ +D + +V G
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSS----------YTYGALIDGVC-KVGEMG 381
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
A L +Q KG + + + NT + + KG + A ++++ + G +
Sbjct: 382 AAEILMNE-----MQSKGVNITQV-VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T N+I S F + ++EA + M E +Y +I K G + A + +
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+G + + YN +I A K G+I E K M+++G++PD TY +LI A +
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
+A + M G N VT T +
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVM 580
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 188/482 (39%), Gaps = 36/482 (7%)
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G ++ L V++ + D + + K +ID IF +M ++G +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
+++ L + +V ++ +L ++ + +G+K TYN +I+ +K + +KK
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
G + +TY++++ RG D+ TSL+ + G
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQD 523
L + E L P + A ++ K + +EI+ S+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCK-------------VGEMGAAEILMNEMQSKG 394
Query: 524 ANLDS--HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFD 581
N+ +T I D + +D+ AS ++ ++QKG + D
Sbjct: 395 VNITQVVFNTLI-----DGYCRKGMVDE----------ASMIYDV-----MEQKGFQA-D 433
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+ NT S F + A + E GV + +Y +++ + K+G EA +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
EM K + TYN++I K G+ A + + G D Y +LI+ A
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
+DE + F +M G++ + VTY +I SKAG +A+ M G T ++ T
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 762 TL 763
L
Sbjct: 614 AL 615
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 162/402 (40%), Gaps = 49/402 (12%)
Query: 43 LTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLI--------------LRS 88
L V +LS PTL + FF R S+ L P +++ +RS
Sbjct: 60 LNSNVTRLVLSEPTLPTQSCIDFFKLLREFESN-LKPDLTAVVTLSHRLYSNRRFNEMRS 118
Query: 89 L----------SRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILD 138
L RP I ++ + F+ + + + F E L++ D
Sbjct: 119 LLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFD 178
Query: 139 YIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSN 198
Y+ ++ L + +++ L+A+ + I L IF ++++ + +
Sbjct: 179 YMVKKGLSIDERSCIVF---LVAAKKRRRIDLCLEIFRRMVD------------SGVKIT 223
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATS 258
S +I L R+ + +E + K KG + + YN I+A+ D +
Sbjct: 224 VYSLTIVVEGLC---RRGE--VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 259 FSLFHQMPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
+ M + TY L+ + K GK+ DA +++++ + D YT+LI
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ + A +F+++ G P + Y +L+D + K ++ A L +M +GV +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+N LI G + G + A ++ +++KG D T + I
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 200/485 (41%), Gaps = 57/485 (11%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH-ATRIFNQMHNN 334
LIS K+G + A+ + + +PD FTY +++ + A ++N+M
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
P + L+D L+K + S+A ++F+ M G+ + TY ILI GL + G + A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
LF +++ G + D + ++ ++ GFV+ L +SL+ G
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 455 IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ + R+ L ++ + ++ P ++ + ++ G +
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQG---------------LSKAGKIEDA 357
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
+ +L+ + S DT N V + L +++
Sbjct: 358 LKLLSSMPSKGI-SPDTYC-----------------YNAVIKALCGRGLLEEGRSLQLEM 399
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKG 631
++SF +T L + + L + EIFTE +G P T+N+++ K G
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAE--EIFTEIEKSGCSPSVATFNALIDGLCKSG 457
Query: 632 YFNEAWAIITEMGEKLCPADI---------ATYNMIIQGLGKIGRA--DLASAILDRLLK 680
EA ++ +M E PA + +++ +++ G I +A DLA
Sbjct: 458 ELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVES-GSILKAYRDLA-----HFAD 510
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
G DIV YN LIN +AG ID K ++ G++PD VTYNTLI + G ++
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 741 AYKFL 745
A+K
Sbjct: 571 AFKLF 575
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 180/471 (38%), Gaps = 67/471 (14%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+N +L + + ++ + M K + + + + I + G + + +F
Sbjct: 164 TYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M G P+ TY LIS LC+ G DA ++ ++ + PD + L+ G CK +
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ A + +GF G Y+SL+D LF+A + ++A +L+ M ++ +K Y I
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
LI GL K G+ E A L + KG D Y+ ++
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
D T T L+ + ++G + + + + P V + A ++ K+
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS------- 456
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
G+ E A L H ++ G
Sbjct: 457 --------GELKE----------ARLLLHKMEV------------------------GRP 474
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
+ LF R+ G+ SFD MV + G + A + F + G P +Y
Sbjct: 475 ASLFL-----RLSHSGNRSFDT-MVES--------GSILKAYRDLAHFADTGSSPDIVSY 520
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
N +++ F + G + A ++ + K D TYN +I GL ++GR + A
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/532 (20%), Positives = 190/532 (35%), Gaps = 117/532 (21%)
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
E+L + D + + LI K + A F +M RP YN +L V+ +
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE 175
Query: 354 TKVSE-ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
A ++ +M + + T+ IL+ GL K GR A +F D+
Sbjct: 176 EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM----------- 224
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
RG + VT T L+ G+ + G D +L ++
Sbjct: 225 ------------------------TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTK 532
P + A ++ F G E +L +
Sbjct: 261 TSGNYPDSVAHNALLDG---------------FCKLGRMVEAFELL-------------R 292
Query: 533 IEDEEGDEWSLSPHMDKLANQVKSSGY--ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS 590
+ +++G L + + ++ Y A +L+ + ++ DI + +
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP------DIILYTILIQ 346
Query: 591 IFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
GK+ A KL G+ P +Y YN+++ + +G E ++ EM E
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV---- 706
D T+ ++I + + G A I + K G + +N LI+ L K+G + E
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 707 -------------------NKFFEQMKSSGI----------------NPDVVTYNTLIEV 731
N+ F+ M SG +PD+V+YN LI
Sbjct: 467 HKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLING 526
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT----LDYLGREID--KLRYQK 777
+AG + A K L ++ G +P+ VT T L +GRE + KL Y K
Sbjct: 527 FCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK 578
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 5/206 (2%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S + +S+A N LL K +E ++ +L +K GF L GY+ I
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEAFELL-RLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 257 TSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+F L+ M PD+ Y LI L K GK++DAL + + + PD + Y +I
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
+ C ++ + +M P + L+ + + V EA ++F ++ + G
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLF 398
S T+N LI GL K+G + A L
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLL 466
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 61/299 (20%)
Query: 150 CTP--LIYNSLLIASLRNN-HIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAF 206
C P YN +L +R LAF+++ ++ L N + N F
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEM----------------LKCNCSPNLYTF 201
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
L+ L K + Q++F M +G + + Y I I G + LF++M
Sbjct: 202 GILMDGLYKKGRTSDAQKMFDD-MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 267 G----PDLCTYNCLISVLCKLGKV-----------KDALIV------------------- 292
PD +N L+ CKLG++ KD ++
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 293 -----WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
+ ++ +PD YT LIQG K KI+ A ++ + M + G P T YN+++
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 348 DVLFKATKVSEACQLFEKMAQ-EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L + E L +M++ E +C T+ ILI + +NG A +F +++K G
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDAC-THTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 116/336 (34%), Gaps = 97/336 (28%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALR 214
Y+SL+ R AF ++ + L N + I + L+ L
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANM----------------LKKNIKPDIILYTILIQGLS 349
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDL 270
KA K+E M KG + DT+ YN I A G L SL +M PD
Sbjct: 350 KAG-KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 271 CT-----------------------------------YNCLISVLCKLGKVKDA------ 289
CT +N LI LCK G++K+A
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 290 ------------------------------LIVWEDLNACA---HQPDHFTYTTLIQGCC 316
L + DL A PD +Y LI G C
Sbjct: 469 MEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFC 528
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+ ID A ++ N + G P ++ YN+L++ L + + EA +LF A++ + S
Sbjct: 529 RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPA 586
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
Y L+ + + A+ L+ KK +D T
Sbjct: 587 VYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDET 622
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/536 (20%), Positives = 201/536 (37%), Gaps = 140/536 (26%)
Query: 266 PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHAT 325
P P + + L++V+ K+ K + + + L D +T L+ C++ + A+
Sbjct: 68 PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 326 RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
+M GF P + + SL++ ++ EA + +M + G+K Y +I L
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 386 IKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDL 445
KNG A +LF ++ G D + Y
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMY-------------------------------- 215
Query: 446 VTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF 505
TSL+ G+ GRW D L++ + + + P V+ + A ++A +K
Sbjct: 216 ---TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK------------- 259
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
+G F LD+ ++L N++ A +FT
Sbjct: 260 --EGKF--------------LDA-------------------EELYNEMIRMSIAPNIFT 284
Query: 566 PTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMS 625
T + ++ F +G + A ++F + G P Y S+++
Sbjct: 285 YT-------------------SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
F K ++A I EM +K + TY +IQG G++G+ ++A + ++ +G
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKS---SGINPDVVTYNTLI------------- 729
+I YN L++ L G++ + FE M+ G+ P++ TYN L+
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 730 ----------------------EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ KAG +K+A + G PN VT TT+
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 186/457 (40%), Gaps = 41/457 (8%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
DL T N L++ C+ + A + +PD T+T+LI G C +++ A +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
NQM G +P ++Y +++D L K V+ A LF++M G++ Y L++GL +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
GR A +L + K+ D IT++ ++ ++ T
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF--- 505
TSL+ G G D ++ + P V+ + + + K K D +F
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK--CKKVDDAMKIFYEM 343
Query: 506 PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
KG LTG N ++ T I+ QV A ++F+
Sbjct: 344 SQKG--------LTG----NTITYTTLIQG---------------FGQVGKPNVAQEVFS 376
Query: 566 PTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA---GVDPVSYTYNS 622
+ V +I N L GK+ A +FE + GV P +TYN
Sbjct: 377 HMVSRGVPP------NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ G +A + +M ++ I TY +IIQG+ K G+ A + L +G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
++V Y T+I+ L + G E + F +MK G++
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 35/313 (11%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+F L++ + + E + +++ +++ G P ++Y +++ + +N H+ A S
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVN-----QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ E + + ++ NS R AD L + M K+
Sbjct: 199 LFDQM-ENYGIRPDVVMYTSLVNGLCNSGR---------WRDADSLL-------RGMTKR 241
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
D +N I AF G + L+++M P++ TY LI+ C G V +A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
++ + PD YT+LI G CK K+D A +IF +M G TI Y +L+
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
+ K + A ++F M GV + +TYN+L+H L NG+ + A +F D++K+ +D
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE--MD 419
Query: 410 GI-----TYSIIV 417
G+ TY++++
Sbjct: 420 GVAPNIWTYNVLL 432
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 165/420 (39%), Gaps = 33/420 (7%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGK 285
M K GF D + I+ F + + S+ +QM PD+ Y +I LCK G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V AL +++ + +PD YT+L+ G C + + A + M +P I +N+
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+D K K +A +L+ +M + + + TY LI+G G + A +F ++ KG
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
F D + Y+ ++ +G + +T T+L+ G + G+ +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 466 RLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDAN 525
+ H+ + P + + + N KK + I Q
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA---------------LMIFEDMQKRE 417
Query: 526 LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV 585
+D I W+ + + L K A +F + ++++ D I
Sbjct: 418 MDGVAPNI-------WTYNVLLHGLCYNGKLEK-ALMVF-----EDMRKREMDIGIITYT 464
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ A GK+ A LF GV P TY +++S ++G +EA + +M E
Sbjct: 465 IIIQGMCKA-GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+A+ L+ K + ++F++ M +KG +T Y I FG G + +F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYE-MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ---PDHFTYTTLIQGCC 316
M P++ TYN L+ LC GKVK AL+++ED+ P+ +TY L+ G C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K++ A +F M G I Y ++ + KA KV A LF + +GVK +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
TY +I GL + G A+ LF +K+ G
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 168/440 (38%), Gaps = 79/440 (17%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y +++ + + + A +F M + P I + LL+V+ K K L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
GV T N+L++ ++ +P A + + K
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK------------------------ 135
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
GF D+VT TSL+ G R + ++ + E + P V+ + +
Sbjct: 136 -----------LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
++ KN G + +S+ ++ + + + P +
Sbjct: 185 DSLCKN---------------GHVNYALSLF-----------------DQMENYGIRPDV 212
Query: 548 ---DKLANQVKSSGY---ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
L N + +SG A L ++++ D+ N + F+ +GK A
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP------DVITFNALIDAFVKEGKFLDA 266
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
+L+ + P +TY S+++ F +G +EA + M K C D+ Y +I G
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
K + D A I + ++G + + Y TLI G+ G+ + + F M S G+ P+
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 722 VVTYNTLIEVHSKAGLLKDA 741
+ TYN L+ G +K A
Sbjct: 387 IRTYNVLLHCLCYNGKVKKA 406
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N+I + L+ + Q+VF ++ + G + YN+ +H G + +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 261 LFHQMP-------GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+F M P++ TYN L+ LC GK++ AL+V+ED+ TYT +IQ
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
G CK K+ +A +F + + G +P + Y +++ LF+ EA LF KM ++GV
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y I+ + + FNEA + T M E I + ++ + K+ + D+ + D L
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
G D+ N L+N ++ + + F +M G PD+VT+ +LI ++
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
+A + M++ G P+ V TT+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTI 183
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 200/488 (40%), Gaps = 63/488 (12%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
A N L+ + K M E V+ K M + G + YN ++ + ++ +F
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRK-MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV 247
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M PD+ TYN +I CK G+ + A+ D+ H+ D TY T+IQ C
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
++ +M G + ++ ++ L K K++E +FE M ++G K + Y +
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
LI G K+G E A L + +G D +TYS++V G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
++ + +SL+ G+ K GR D +RL + + E + A ++A K+ +K D
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH---RKVD 484
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
E +++ ++E+EEG + ++ + L+ K
Sbjct: 485 ------------EAIALF------------KRMEEEEGCDQTVYTYTILLSGMFKEHRNE 520
Query: 561 SQL----------FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE 610
L TPT ++T L + GK++ ACK+ +
Sbjct: 521 EALKLWDMMIDKGITPTAAC-----------FRALSTGLCL---SGKVARACKILDELAP 566
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAI---ITEMGEKLCPADIATYNMIIQGLGKIGR 667
GV + ++++ K G EA + ITE G ++ P I T ++I L K+G+
Sbjct: 567 MGV-ILDAACEDMINTLCKAGRIKEACKLADGITERGREV-PGRIRT--VMINALRKVGK 622
Query: 668 ADLASAIL 675
ADLA ++
Sbjct: 623 ADLAMKLM 630
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 179/481 (37%), Gaps = 36/481 (7%)
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
N LI KLG V++ L VW + +P +TY L+ G +D A R+F M +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
+P + YN+++ KA + +A + M G +A TY +I + +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 394 AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMV 453
L+ ++ +KG V +S+++ +G ++ T L+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 454 GIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSE 513
G K G + RL+ + + P V+ + + KN
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN-------------------- 410
Query: 514 IMSILTGSQDANLDS-HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRV 572
G + LD H + + + S +D L + A +LF + +
Sbjct: 411 ------GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD-EAERLF-----EEM 458
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE-IFTEAGVDPVSYTYNSIMSSFVKKG 631
+KG + D N + F K+ A LF+ + E G D YTY ++S K+
Sbjct: 459 SEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
EA + M +K A + + GL G+ A ILD L G LD +
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED 577
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
+IN L KAGRI E K + + G +I K G A K + +
Sbjct: 578 -MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGI 636
Query: 752 G 752
G
Sbjct: 637 G 637
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ +N ++ KA + Q+ KL M+ +G D Y I A D + +L
Sbjct: 258 VTYNTMIKGYCKAG---QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 262 FHQMPGPDLCT----YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ +M + ++ +I LCK GK+ + V+E++ +P+ YT LI G K
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ ++ A R+ ++M + GF+P + Y+ +++ L K +V EA F +G+ +
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y+ LI GL K GR + A LF ++ +KG D Y+ ++
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 595 KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIAT 654
+GKL+ +FE G P Y ++ + K G +A ++ M ++ D+ T
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
Y++++ GL K GR + A G ++ + Y++LI+ LGKAGR+DE + FE+M
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYK-FLKMMLDAGCTPNHVTDTTL 763
G D YN LI+ +K + +A F +M + GC T T L
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
GY T ++++ + + D + T + A L++ E G+
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
+ ++ ++ K+G NE + + M K ++A Y ++I G K G + A +L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
R++ +G D+V Y+ ++N L K GR++E +F + G+ + + Y++LI+ KA
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 736 GLLKDAYKFLKMMLDAGCT 754
G + +A + + M + GCT
Sbjct: 446 GRVDEAERLFEEMSEKGCT 464
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 596 GKLSLACKLFEIF---TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
GKL + +L ++ E G++P YTYN +M+ V + + A + M DI
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA---------------- 696
TYN +I+G K G+ A L + +G D + Y T+I A
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 697 -------------------LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
L K G+++E FE M G P+V Y LI+ ++K+G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 738 LKDAYKFLKMMLDAGCTPNHVT 759
++DA + L M+D G P+ VT
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVT 399
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
NS+ ++ L+ L KA E +++F + M +KG D++ YN I AF + + +L
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEE-MSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 262 FHQMPGPDLC-----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
F +M + C TY L+S + K + ++AL +W+ + P + L G C
Sbjct: 490 FKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNS----LLDVLFKATKVSEACQLFEKMAQEGVK 372
+ K+ A +I +++ P ++ ++ +++ L KA ++ EAC+L + + + G +
Sbjct: 550 LSGKVARACKILDELA-----PMGVILDAACEDMINTLCKAGRIKEACKLADGITERGRE 604
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTL 397
+ ++I+ L K G+ + A L
Sbjct: 605 VPGRIRTVMINALRKVGKADLAMKL 629
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 557 SGYASQLFTPTPGQ--RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVD 614
+G S +F + + V + G DI NT + + G+ A + G +
Sbjct: 230 NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHE 289
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
TY +++ + F A+ EM EK ++++I GL K G+ + +
Sbjct: 290 ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ ++++G ++ +Y LI+ K+G +++ + +M G PDVVTY+ ++ K
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTL-DYLGR 768
G +++A + G N + ++L D LG+
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
P ++ N +I+ GK+G + + ++ + G + YN L+N L A +D +
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
FE M+S I PD+VTYNT+I+ + KAG + A + L+ M G + +T T+
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 188/457 (41%), Gaps = 49/457 (10%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD Y L++ LCK G V A+ + E + + + TY L++G C ++ + +
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++ G P Y+ LL+ +K EA +L +++ +G + + +YN+L+ G K
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
GR + A LF +L KG + ++Y+I++ +VT
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 318
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGD---------LVPKVLRWKAGMEASIKNPPSKK 498
L+ + HGR + +++K + +G+ P + R + + +
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 499 KDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG 558
Y P++G ++ I S L H++K+++ SLS N+ K
Sbjct: 379 MIYRRCKPNEGTYNAIGS---------LCEHNSKVQEAFYIIQSLS-------NKQKCCT 422
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
+ D + ++ KG A +L T G DP ++
Sbjct: 423 H-----------------------DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAH 459
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILDR 677
TY++++ +G F A +++ M E + C + +N +I GL KI R DLA + +
Sbjct: 460 TYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEM 519
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
++++ + Y L+ + ++ + ++++
Sbjct: 520 MVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 179/507 (35%), Gaps = 49/507 (9%)
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ D+ E L H+P+ T L+ CK ++ A R+ M ++G P Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ L K V A QL EKM G ++ TYN L+ GL G + L +KG
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+ TYS ++ +G +LV+ L+ G K GR D
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 466 RLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDAN 525
L + + V+ + + G + E S+L A
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRC---------------LCCDGRWEEANSLL-----AE 306
Query: 526 LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMV 585
+D GD + L N + G Q + KG+ F +
Sbjct: 307 MDG---------GDRAPSVVTYNILINSLAFHGRTEQALQVL---KEMSKGNHQFRVTAT 354
Query: 586 --NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
N ++ +GK+ L K + P TYN+I S EA+ II +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 644 G--EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+K C D Y +I L + G A +L + + G D Y+ LI L G
Sbjct: 415 SNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Query: 702 RIDEVNKFFEQM-KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT- 759
+ M +S P V +N +I K A + +MM++ PN T
Sbjct: 473 MFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Query: 760 ---------DTTLDYLGREIDKLRYQK 777
+ L+ +D+LR +K
Sbjct: 533 AILVEGIAHEDELELAKEVLDELRLRK 559
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 102/216 (47%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ L+ LCK ++K A+ V E + + PD YT L+ CK + +A ++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M ++G+ T+ YN+L+ L ++++ Q E++ Q+G+ + TY+ L+ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
+ A L ++ KG + ++Y++++ +GF ++V+
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
L+ + GRW+ + L+ + GD P V+ +
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 30/346 (8%)
Query: 80 SAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDY 139
SAY+ ++ L + ++ + ++N L+ L + + +++LQ ++
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE- 200
Query: 140 IQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS 197
L+Q G P Y+ LL A+ + A + ++I
Sbjct: 201 ----RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV----------------K 240
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLAT 257
N +++N LL K + +F +L KGF + YNI + C G
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFREL-PAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 258 SFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ--PDHFTYTTL 311
+ SL +M G P + TYN LI+ L G+ + AL V ++++ HQ +Y +
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
I CK K+D + ++M +P YN++ + +KV EA + + ++ +
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ Y +I L + G AA+ L ++ + G D TYS ++
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 190/476 (39%), Gaps = 36/476 (7%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + YN ++ L K G AL V+ED + T+ L++G CK +I+ I
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M N +P Y +++ L + + +++++M ++ +K Y L+ GL K
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
+GR E Y LF ++K K +D Y +++ G++ D+
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
+++ G+ + D +L + E +L P M A + ++ D+S +
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYV--VMNRLSDFSNVLER 463
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
G+ +S D DEE + +L + +K+ G+ S
Sbjct: 464 IGELGYPVS------DYLTQFFKLLCADEEKNAMALD-----VFYILKTKGHGS------ 506
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
+ + N + G + + LF + G +P S +Y+ + F
Sbjct: 507 --------------VSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK--QGGYL 685
V+KG A + ++ E C IA Y + +GL +IG D ++ L + G +
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
+ Y + + K ++V K ++M G+ + V Y +I SK G +K A
Sbjct: 613 EF-KYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVA 667
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
++E + G P + YN IM + VK GYF+ A A+ + E + T+ ++++GL
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
K GR + IL R+ + D+ Y +I L G +D + +++M+ I PDV+
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 724 TYNTLIEVHSKAGLLKDAYK-FLKM 747
Y TL+ K G ++ Y+ F++M
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEM 359
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+ N + + G LA ++E F E G+ S T+ ++ K G E I+ M
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRM 289
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
E LC D+ Y +I+ L G D + + D + + D++ Y TL+ L K GR+
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRV 349
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+ + F +MK I D Y LIE G ++ A + ++D+G
Sbjct: 350 ERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 166/458 (36%), Gaps = 70/458 (15%)
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
G++ YN+ L + A QL E M +G S + + ILI N R
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRV 212
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
Y ++ +KK G Y+ I+ G V + T L+ G
Sbjct: 213 YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 455 IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ K GR + +++ +RE P V + A ++ +
Sbjct: 273 LCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSE--------------------- 311
Query: 515 MSILTGSQDANLDSHDTKIEDE-EGDEWSLSPHMDKLANQVK-SSGYASQLFTPTPGQRV 572
G+ DA+L D DE + D + + L + GY +LF G+++
Sbjct: 312 -----GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY--ELFMEMKGKQI 364
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
D ++ + F+A GK+ AC L+E ++G YN+++
Sbjct: 365 L------IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQ 418
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL-------------- 678
++A+ + E+ D T + I+ + R S +L+R+
Sbjct: 419 VDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQF 478
Query: 679 --------------------LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
LK G+ + +YN L+ AL K G I + F +M+ G
Sbjct: 479 FKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGF 538
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
PD +Y+ I + G +K A F + +++ C P+
Sbjct: 539 EPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPS 576
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
YNI + A GD+ S SLF++M PD +Y+ I + G VK A E +
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKII 569
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV--LFKATK 355
+ P Y +L +G C+ +ID + + N G + + L V + K +
Sbjct: 570 EMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGN-VESGPMEFKYALTVCHVCKGSN 628
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+ ++ ++M QEGV + Y +I G+ K+G + A +F +LKK+
Sbjct: 629 AEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 22/241 (9%)
Query: 153 LIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVA 212
+YN ++ A ++N + LA +++ E L S + I L A
Sbjct: 229 FLYNRIMDALVKNGYFDLALAVYEDFKE------------DGLVEESTTFMILVKGLCKA 276
Query: 213 LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GP 268
R +M LE Q + + K D + Y I G+L S ++ +M P
Sbjct: 277 GRIEEM-LEILQRMRENLCKP----DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ Y L+ LCK G+V+ ++ ++ D Y LI+G K+ A ++
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN-ILIHGLIK 387
+ ++G+ +YN+++ L +V +A +LF+ +E ++ +T + I++ ++
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 388 N 388
N
Sbjct: 452 N 452
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 68/164 (41%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G++ ++ + E P + Y +++ + V +G + + + EM D+ Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
++ GL K GR + + + + +D +Y LI G++ +E +
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
SG D+ YN +I+ + AYK ++ ++ P+ T
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L + + + +N L+ AL K + +F++ M K GF D+ Y+I I F GD
Sbjct: 499 LKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYE-MRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA--LIVWEDLNACAHQPDHFTY 308
+ + S ++ P + Y L LC++G++ DA L+V E L P F Y
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKY 616
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ CK + ++ ++M+ G ++Y +++ + K + A ++F ++ +
Sbjct: 617 ALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKK 676
Query: 369 EGV 371
V
Sbjct: 677 RKV 679
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 218/540 (40%), Gaps = 44/540 (8%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
++FN ++ K ++ + F + K G + +NI I+ G +A + L
Sbjct: 223 VSFNSIMSGYCKLGF-VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
M PD TYN L LG + A V D+ PD TYT L+ G C+
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNS-LLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
ID + M + GF +I+ S +L L K ++ EA LF +M +G+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
+I+IHGL K G+ + A L+ ++ K + T+ ++L
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK--NPPS 496
G +D+V ++ G K G + L K V E + P V + + + K N
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 497 KKK--DYSPMF---PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
+K D ++ PS ++ +M DA + +TK +D+L
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM-------DAYANCGNTK-------------SIDELR 561
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACK--LFEIFT 609
++K+ G T + + +G + + V + ++ CK L ++ +
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV--------LRERIFEKCKQGLRDMES 613
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E G+ P TYN+I+ + + + A+ + M + A ATYN++I L G
Sbjct: 614 E-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + L +Q L Y TLI A G + K F Q+ G N + Y+ +I
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 138/676 (20%), Positives = 258/676 (38%), Gaps = 73/676 (10%)
Query: 107 QDAVVLHPQSFNPLL--HSLIISHNFHETLQILDYIQQRH--LLQPGCTPLIYNSLLIAS 162
+D SF+ LL H L F E IL+ + Q + T L+++ LL S
Sbjct: 75 RDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLS 134
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
R + + I K+ D N N ++ ++N +L R+ D +
Sbjct: 135 SRLRMVDDSLYILKKM----------------KDQNLNVSTQSYNSVLYHFRETD---KM 175
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCK 282
V+ ++ DK T +C L S + + GP + ++N ++S CK
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCK 234
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
LG V A + + C P +++ LI G C I A + + M+ +G P ++
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN L +S A ++ M +G+ TY IL+ G + G + L D+
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 403 KKGQFVDGIT-YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+G ++ I S+++ G DLV + ++ G+ K G++
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
D L + + ++P A + KG E S+L
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLG---------------LCQKGMLLEARSLL--- 456
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ--RVQQKGSDS 579
D+ + S +T +D + + GYA + +V + +
Sbjct: 457 -DSLISSGET---------------LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+ N+ + + ++ A K+ ++ G+ P +Y ++M ++ G +
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLK-----------QGGYLDI 687
EM + P TY++I +GL + + + + +L +R+ + +G D
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ YNT+I L + + F E MKS ++ TYN LI+ G ++ A F+
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680
Query: 748 MLDAGCTPNHVTDTTL 763
+ + + + TTL
Sbjct: 681 LQEQNVSLSKFAYTTL 696
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 77/143 (53%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++S K G +EA ++ +M D+ Y+++I GL K+G+ D+A + D + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
+ + L+ L + G + E + + SSG D+V YN +I+ ++K+G +++A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 743 KFLKMMLDAGCTPNHVTDTTLDY 765
+ K++++ G TP+ T +L Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIY 511
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 578 DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
++ DI + N + + G + A +LF++ E G+ P T+NS++ + K EA
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
I+ + + +Y ++ G + + +G V Y+ + L
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 698 GKAGRIDEVN-----KFFEQ-------MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
+ + + N + FE+ M+S GI PD +TYNT+I+ + L A+ FL
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 746 KMM----LDAGCTPNHVTDTTLDYLG--REIDKLRY 775
++M LDA ++ +L G R+ D Y
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 166/459 (36%), Gaps = 49/459 (10%)
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
Y++++D L + K+ +A + + S ++N ++ G K G + A + FC +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
K G +++I++ G D VT L G H G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEAS------------IKNPPSKKKDYSPMFPSKGD 510
+++ + + L P V+ + + +K+ S+ + + + P
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 511 FSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG--------YASQ 562
S + TG D L + D LSP D +A + G A
Sbjct: 370 LSGLCK--TGRIDEALSLFNQMKAD------GLSP--DLVAYSIVIHGLCKLGKFDMALW 419
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
L+ +R+ L KG L A L + +G YN
Sbjct: 420 LYDEMCDKRILPNSRTH------GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ + K G EA + + E +AT+N +I G K A ILD + G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA------- 735
+V Y TL++A G +++ +MK+ GI P VTY+ + + +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 736 -----GLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
+ + + L+ M G P+ +T +T + YL R
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVD---PV 616
A LF +R++Q D+ NT L G++ LA FEI + V P
Sbjct: 358 ARNLFDEMTNRRIEQ------DVFSYNTLLDAICKGGQMDLA---FEILAQMPVKRIMPN 408
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
+Y++++ F K G F+EA + EM D +YN ++ K+GR++ A IL
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ G D+V YN L+ GK G+ DEV K F +MK + P+++TY+TLI+ +SK G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
L K+A + + AG + V + L
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSAL 555
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+T + F G+ A LF G+ +YN+++S + K G EA I+ EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ TYN ++ G GK G+ D + + ++ +++ Y+TLI+ K G E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
+ F + KS+G+ DVV Y+ LI+ K GL+ A + M G +PN VT ++ +D
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 765 YLGR 768
GR
Sbjct: 593 AFGR 596
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 165/431 (38%), Gaps = 68/431 (15%)
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ +I + K+ A RIF G+ +++L+ ++ EA +F M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 369 EGVKASCQTYNILIHGLIKNGRP-EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
G++ + TYN +I K G + F ++++ G D IT++ ++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 428 XXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM 487
R D+ + +L+ I K G+ D ++ + ++P V+ + +
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
+ F G F E +++ G+ L +
Sbjct: 417 DG---------------FAKAGRFDEALNLF-------------------GEMRYLGIAL 442
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEI 607
D+++ NT LSI+ G+ A +
Sbjct: 443 DRVS---------------------------------YNTLLSIYTKVGRSEEALDILRE 469
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
G+ TYN+++ + K+G ++E + TEM + ++ TY+ +I G K G
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
A I G D+V+Y+ LI+AL K G + ++M GI+P+VVTYN+
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 728 LIEVHSKAGLL 738
+I+ ++ +
Sbjct: 590 IIDAFGRSATM 600
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 136/308 (44%), Gaps = 9/308 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQV--FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N + +N ++ A K M EF+QV F M + G D +N + G +
Sbjct: 302 NLVTYNAVIDACGKGGM--EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 260 SLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+LF +M D+ +YN L+ +CK G++ A + + P+ +Y+T+I G
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K + D A +F +M G + YN+LL + K + EA + +MA G+K
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXX 435
TYN L+ G K G+ + +F ++K++ + +TYS ++
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP 495
G D+V ++L+ + K+G L+ + + + P V+ + + ++A ++
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 496 -SKKKDYS 502
+ DYS
Sbjct: 600 MDRSADYS 607
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 587 TFLSIFLAKGKLSL----ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
T+ ++ A GK + K F+ GV P T+NS+++ + G + A + E
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
M + D+ +YN ++ + K G+ DLA IL ++ + ++V Y+T+I+ KAGR
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
DE F +M+ GI D V+YNTL+ +++K G ++A L+ M G + VT
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 763 L 763
L
Sbjct: 485 L 485
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ L++ G A LF+ T ++ ++YN+++ + K G + A+ I+ +M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K ++ +Y+ +I G K GR D A + + G LD V YNTL++ K GR +E
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+M S GI DVVTYN L+ + K G + K M PN +T +TL
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+ + +S GK+++A ++FE G Y +++++S++ + G EA ++ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 644 GEKLCPADIATYNMIIQGLGKIGRA-DLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
E ++ TYN +I GK G + D + + G D + +N+L+ + G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
+ F++M + I DV +YNTL++ K G + A++ L M PN V+ +T
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 763 L 763
+
Sbjct: 415 V 415
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 26/272 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+FN LL + + D + R + Q YN+LL A + + LAF I
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ---DVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 176 LKL-IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKG 234
++ ++ N ++++ ++ KA E +F + M G
Sbjct: 398 AQMPVKRIM-----------------PNVVSYSTVIDGFAKAGRFDEALNLFGE-MRYLG 439
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDAL 290
ALD YN + + G + + +M D+ TYN L+ K GK +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL 350
V+ ++ P+ TY+TLI G K A IF + + G R ++Y++L+D L
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 351 FKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
K V A L ++M +EG+ + TYN +I
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/519 (18%), Positives = 195/519 (37%), Gaps = 77/519 (14%)
Query: 246 IHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
I G +G + + +F G + ++ LIS + G ++A+ V+ +
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 302 QPDHFTYTTLIQGCCK-TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEAC 360
+P+ TY +I C K + + F++M NG +P I +NSLL V + A
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 361 QLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQX 420
LF++M ++ +YN L+ + K G+ + A+ + + K + ++YS ++
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 421 XXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
G +D V+ +L+ K GR + +++ + + V
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 481 LRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA----NLDSHDTKIEDE 536
+ + A + + +G + E+ + T + NL ++ T I+
Sbjct: 480 VTYNALLGG---------------YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 537 EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKG 596
+ L ++ + KS+G + D+ + + + G
Sbjct: 525 --SKGGLYKEAMEIFREFKSAGLRA-------------------DVVLYSALIDALCKNG 563
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
+ A L + T+ G+ P TYNSI+ +F + + + AD +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS-------------ADYSNG- 609
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID------EVN--- 707
G +S+ L L + G I ++ L D E++
Sbjct: 610 ---------GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL 660
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
+ F +M I P+VVT++ ++ S+ +DA L+
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
GF L+ + +NI ++ F G+++ + +F ++ P + ++N LI+ CK+G + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + +PD FTY+ LI CK K+D A +F++M G P +++ +L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
+ ++ + ++KM +G++ YN L++G KNG AA + + ++G D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMK 469
ITY+ ++ G +D V ++L+ G+ K GR +R ++
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 470 HVREGDLVPKVLRWKAGMEASIK 492
+ + P + + M+A K
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCK 497
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 100/184 (54%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
++ + N ++ F +G +S A K+F+ T+ + P ++N++++ + K G +E + +
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+M + D+ TY+ +I L K + D A + D + K+G + V++ TLI+ +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G ID + + +++M S G+ PD+V YNTL+ K G L A + M+ G P+ +T
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 760 DTTL 763
TTL
Sbjct: 418 YTTL 421
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 5/293 (1%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
LD+ N FN L+ K + Q+VF ++ K+ +N I+ + G+
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT-KRSLQPTVVSFNTLINGYCKVGN 290
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
L F L HQM PD+ TY+ LI+ LCK K+ A +++++ P+ +TT
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI G + +ID + +M + G +P ++YN+L++ K + A + + M + G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
++ TY LI G + G E A + ++ + G +D + +S +V
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
G D VT T +M K G +L+K ++ VP V+ +
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 1/194 (0%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
Q++ KG DI + NT ++ F G L A + + G+ P TY +++ F +
Sbjct: 369 QKMLSKGLQP-DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G A I EM + D ++ ++ G+ K GR A L +L+ G D V
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
Y +++A K G K ++M+S G P VVTYN L+ K G +K+A L ML
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 750 DAGCTPNHVTDTTL 763
+ G P+ +T TL
Sbjct: 548 NIGVVPDDITYNTL 561
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 202 NSIAFNQLLVA-LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N + F L+ R ++ L ++ + K++ KG D YN ++ F GDL + +
Sbjct: 344 NDVIFTTLIHGHSRNGEIDL-MKESYQKML-SKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
+ M PD TY LI C+ G V+ AL + ++++ + D ++ L+ G C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K ++ A R +M G +P + Y ++D K +L ++M +G S
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
TYN+L++GL K G+ + A L + G D ITY+ ++
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+AG Y +N +M+ F K+G ++A + E+ ++ + ++N +I G K+G D
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
+ ++ K D+ Y+ LINAL K ++D + F++M G+ P+ V + TLI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 730 EVHSKAG---LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
HS+ G L+K++Y + ML G P+ V TL
Sbjct: 353 HGHSRNGEIDLMKESY---QKMLSKGLQPDIVLYNTL 386
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G++ L + ++ G+ P YN++++ F K G A I+ M + D TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+I G + G + A I + + G LD V ++ L+ + K GR+ + + +M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+GI PD VTY +++ K G + +K LK M G P+ VT L
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGK 285
M ++G D Y I F GD+ T+ + +M D ++ L+ +CK G+
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V DA ++ +PD TYT ++ CK ++ +M ++G P + YN
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG 384
LL+ L K ++ A L + M GV TYN L+ G
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+K D+ + ++ + K+ A LF+ + G+ P + +++ + G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+ +M K DI YN ++ G K G A I+D ++++G D + Y TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
I+ + G ++ + ++M +GI D V ++ L+ K G + DA + L+ ML AG
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 754 TPNHVTDTTL 763
P+ VT T +
Sbjct: 482 KPDDVTYTMM 491
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
W E+ + P ++ +N+++ K G A + D + K+ +V +NTLIN
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
K G +DE + QM+ S PDV TY+ LI K + A+ M G PN
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 757 HVTDTTLDY---LGREIDKLR--YQK 777
V TTL + EID ++ YQK
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQK 370
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + F G + A ++ + + G++ +++++ K+G +A + EM
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
D TY M++ K G A +L + G +V YN L+N L K G++
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ + M + G+ PD +TYNTL+E H +
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHR 567
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%)
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+G S D N L+ + + A ++ + E G++P TYN+++ F + G
Sbjct: 188 RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIR 247
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
AW EM ++ C D+ TY ++ G G G A + D ++++G + YN +I
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
L K ++ FE+M G P+V TYN LI AG + ++ M + GC
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 755 PNHVT 759
PN T
Sbjct: 368 PNFQT 372
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 148/375 (39%), Gaps = 61/375 (16%)
Query: 58 HPSHKLHFFNWCRSHHSS------------------PLSPSAYSLI--LRSL----SRPA 93
H L FF++ +HH L P+ +SLI +RSL S
Sbjct: 69 HGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKT 128
Query: 94 FXXXXXXXXXSIKQDAVV-----LHPQ-------SFNPLLHSLIISHNFHETLQILDYIQ 141
F + K D V +H SFN +L L S + ++ ++
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188
Query: 142 QRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
R + YN +L P A + +++E N
Sbjct: 189 GRF----SVDTVTYNVILNGWCLIKRTPKALEVLKEMVE----------------RGINP 228
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +N +L +A ++ F M K+ +D Y +H FG G++ + ++
Sbjct: 229 NLTTYNTMLKGFFRAG-QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M P + TYN +I VLCK V++A++++E++ ++P+ TY LI+G
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ + +M N G P YN ++ + ++V +A LFEKM + T
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 378 YNILIHGLIKNGRPE 392
YNILI G+ R E
Sbjct: 408 YNILISGMFVRKRSE 422
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+FN +L L K+ + ++F L + F++DT YN+ ++ + + + +
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 265 MP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M P+L TYN ++ + G+++ A + ++ + D TYTT++ G +
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I A +F++M G P YN+++ VL K V A +FE+M + G + + TYN+
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
LI GL G L ++ +G + TY++++
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFT-EAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
D+ NT L + ++ A +LF VD V TYN I++ + +A +
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV--TYNVILNGWCLIKRTPKALEV 217
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ EM E+ ++ TYN +++G + G+ A + K+ +D+V Y T+++ G
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
AG I F++M G+ P V TYN +I+V K +++A + M+ G PN T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 760 DTTL 763
L
Sbjct: 338 YNVL 341
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPD----LCTYNCLISVLCKL 283
K M ++G + YN + F G + ++ F +M D + TY ++
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G++K A V++++ P TY +IQ CK +++A +F +M G+ P Y
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N L+ LF A + S +L ++M EG + + QTYN++I + E A LF +
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 404 KGQFVDGITYSIIV 417
+ TY+I++
Sbjct: 399 GDCLPNLDTYNILI 412
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 581 DIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
+ID+V T + F G++ A +F+ GV P TYN+++ KK A
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ EM + ++ TYN++I+GL G ++ R+ +G + YN +I
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
+ +++ FE+M S P++ TYN LI
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 218/540 (40%), Gaps = 44/540 (8%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
++FN ++ K ++ + F + K G + +NI I+ G +A + L
Sbjct: 223 VSFNSIMSGYCKLGF-VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
M PD TYN L LG + A V D+ PD TYT L+ G C+
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNS-LLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
ID + M + GF +I+ S +L L K ++ EA LF +M +G+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
+I+IHGL K G+ + A L+ ++ K + T+ ++L
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK--NPPS 496
G +D+V ++ G K G + L K V E + P V + + + K N
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 497 KKK--DYSPMF---PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
+K D ++ PS ++ +M DA + +TK +D+L
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM-------DAYANCGNTK-------------SIDELR 561
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACK--LFEIFT 609
++K+ G T + + +G + + V + ++ CK L ++ +
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV--------LRERIFEKCKQGLRDMES 613
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E G+ P TYN+I+ + + + A+ + M + A ATYN++I L G
Sbjct: 614 E-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + L +Q L Y TLI A G + K F Q+ G N + Y+ +I
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 138/676 (20%), Positives = 258/676 (38%), Gaps = 73/676 (10%)
Query: 107 QDAVVLHPQSFNPLL--HSLIISHNFHETLQILDYIQQRH--LLQPGCTPLIYNSLLIAS 162
+D SF+ LL H L F E IL+ + Q + T L+++ LL S
Sbjct: 75 RDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLS 134
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
R + + I K+ D N N ++ ++N +L R+ D +
Sbjct: 135 SRLRMVDDSLYILKKM----------------KDQNLNVSTQSYNSVLYHFRETD---KM 175
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCK 282
V+ ++ DK T +C L S + + GP + ++N ++S CK
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCK 234
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
LG V A + + C P +++ LI G C I A + + M+ +G P ++
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN L +S A ++ M +G+ TY IL+ G + G + L D+
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 403 KKGQFVDGIT-YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
+G ++ I S+++ G DLV + ++ G+ K G++
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 462 DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGS 521
D L + + ++P A + KG E S+L
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLG---------------LCQKGMLLEARSLL--- 456
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ--RVQQKGSDS 579
D+ + S +T +D + + GYA + +V + +
Sbjct: 457 -DSLISSGET---------------LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+ N+ + + ++ A K+ ++ G+ P +Y ++M ++ G +
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLK-----------QGGYLDI 687
EM + P TY++I +GL + + + + +L +R+ + +G D
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ YNT+I L + + F E MKS ++ TYN LI+ G ++ A F+
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680
Query: 748 MLDAGCTPNHVTDTTL 763
+ + + + TTL
Sbjct: 681 LQEQNVSLSKFAYTTL 696
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 77/143 (53%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++S K G +EA ++ +M D+ Y+++I GL K+G+ D+A + D + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
+ + L+ L + G + E + + SSG D+V YN +I+ ++K+G +++A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 743 KFLKMMLDAGCTPNHVTDTTLDY 765
+ K++++ G TP+ T +L Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIY 511
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 578 DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
++ DI + N + + G + A +LF++ E G+ P T+NS++ + K EA
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
I+ + + +Y ++ G + + +G V Y+ + L
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 698 GKAGRIDEVN-----KFFEQ-------MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
+ + + N + FE+ M+S GI PD +TYNT+I+ + L A+ FL
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 746 KMM----LDA-GCTPNHVTDTTLDY 765
++M LDA T N + D+ Y
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVY 668
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 166/459 (36%), Gaps = 49/459 (10%)
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
Y++++D L + K+ +A + + S ++N ++ G K G + A + FC +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
K G +++I++ G D VT L G H G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEAS------------IKNPPSKKKDYSPMFPSKGD 510
+++ + + L P V+ + + +K+ S+ + + + P
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 511 FSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSG--------YASQ 562
S + TG D L + D LSP D +A + G A
Sbjct: 370 LSGLCK--TGRIDEALSLFNQMKAD------GLSP--DLVAYSIVIHGLCKLGKFDMALW 419
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
L+ +R+ L KG L A L + +G YN
Sbjct: 420 LYDEMCDKRILPNSRTH------GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ + K G EA + + E +AT+N +I G K A ILD + G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA------- 735
+V Y TL++A G +++ +MK+ GI P VTY+ + + +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 736 -----GLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
+ + + L+ M G P+ +T +T + YL R
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 178/431 (41%), Gaps = 35/431 (8%)
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I+ + +F Q+ + G +P LL+ L K ++F+KM + GV A+ YN+
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+H K+G PE A L ++++KG F D TY+ ++ G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK-NPPSKKK 499
++VT S + G + GR RL + +++ D+ + + ++ + N +
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+ S+G FS ++T + D +I +
Sbjct: 328 RLREVMESRG-FSP--GVVTYNSILRKLCEDGRIRE------------------------ 360
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
A++L T G++++ D NT ++ + + A K+ + E+G+ Y+
Sbjct: 361 ANRLLTEMSGKKIEP------DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y +++ F K A + M EK ATY+ ++ G + D + +L+
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
K+G D+ +Y LI + K ++D FE M+ G+ D V + T+ + + G +
Sbjct: 475 KRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVT 534
Query: 740 DAYKFLKMMLD 750
+A +M +
Sbjct: 535 EASALFDVMYN 545
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 578 DSFDIDMVNTFLSIFLAK-GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA 636
D D+ V ++L I+ AK G ++ + +FE G+ P +++S VK+ +
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
W I +M + A+I YN+++ K G + A +L + ++G + DI YNTLI+
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
K E ++M+ SG+ P++VTYN+ I S+ G +++A + + + D T N
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTAN 306
Query: 757 HVTDTTL 763
HVT TTL
Sbjct: 307 HVTYTTL 313
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG- 267
LL +L K + ++F K++ K G + YN+ +HA GD + L +M
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMV-KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 268 ---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHA 324
PD+ TYN LISV CK +AL V + + P+ TY + I G + ++ A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 325 TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG 384
TR+F ++ ++ + Y +L+D + + EA +L E M G TYN ++
Sbjct: 293 TRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
L ++GR A L ++ K D IT + ++
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL E GV P +TYN+++S + KK EA ++ M +I TYN I
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
G + GR A+ + R +K + V Y TLI+ + IDE + E M+S G +P
Sbjct: 282 GFSREGRMREATRLF-REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
VVTYN+++ + G +++A + L M P+++T TL
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 4/276 (1%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+N L+ K M E V + M++ G A + YN IH F G + + LF +
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDR-MERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE 298
Query: 265 MPG---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
+ + TY LI C++ + +AL + E + + P TY ++++ C+ +I
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A R+ +M P I N+L++ K + A ++ +KM + G+K +Y L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
IHG K E A + +KG TYS +V RG
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLV 477
D+ L+ I K + D+ L + + + LV
Sbjct: 479 CADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLC 281
++M+ +GF+ YN + G + + L +M G PD T N LI+ C
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 282 KLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K+ + A+ V + + + D ++Y LI G CK ++++A M GF PG
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
Y+ L+D + K E +L E+ + G+ A Y LI + K + + A LF +
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 402 KKKGQFVDGITYSII 416
+KKG D + ++ +
Sbjct: 509 EKKGLVGDSVIFTTM 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI NT +S++ K A + + +GV P TYNS + F ++G EA +
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
E+ + + A+ TY +I G ++ D A + + + +G +V YN+++ L +
Sbjct: 297 REIKDDV-TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
GRI E N+ +M I PD +T NTLI + K + A K K M+++G
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 36/242 (14%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQP---------------------------- 303
++ L+ K G + D+++V+E + +C +P
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 304 -------DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+ Y L+ C K+ + A ++ ++M G P YN+L+ V K +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
EA + ++M + GV + TYN IHG + GR A LF ++K + +TY+ +
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT-ANHVTYTTL 313
Query: 417 VLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDL 476
+ RGF +VT S++ + + GR +RL+ + +
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 477 VP 478
P
Sbjct: 374 EP 375
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNS 622
F Q ++ + +I N+F+ F +G++ A +LF EI + + V+YT +
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYT--T 312
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ + + +EA + M + + TYN I++ L + GR A+ +L + +
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D + NTLINA K + K ++M SG+ D+ +Y LI K L++A
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 743 KFLKMMLDAGCTPNHVT 759
+ L M++ G +P + T
Sbjct: 433 EELFSMIEKGFSPGYAT 449
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 139/358 (38%), Gaps = 36/358 (10%)
Query: 36 PPQHKQLLTE-------PVILQILSNPTLHPSHKLHF--FNWCRSHHSSPLSPS--AYSL 84
P + ++LL+E P I + +++ +HF + S ++P+ Y+
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 85 ILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRH 144
+ SR IK D H ++ L+ ++ E L++ + ++ R
Sbjct: 279 FIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 145 LLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSI 204
PG + YNS+L + I A + ++ ++I
Sbjct: 338 F-SPGV--VTYNSILRKLCEDGRIREANRLLTEMS----------------GKKIEPDNI 378
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATS----FS 260
N L+ A K + + +V K+++ G LD + Y IH F +L + FS
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIES-GLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+ + P TY+ L+ K + + E+ D Y LI+ CK +
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQ 497
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+D+A +F M G ++++ ++ ++ KV+EA LF+ M + + + Y
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 133/613 (21%), Positives = 229/613 (37%), Gaps = 120/613 (19%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
G L+ YN I+ + GD+ + M ++ TY LI CK G +++A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
V+E L D Y L+ G C+T +I A R+ + M G R T + NSL++
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
K+ ++ EA Q+F +M +K TYN L+ G + G + A L CD + + V
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL-CDQMCQKEVVP 434
Query: 410 GI-TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM 468
+ TY+I++ RG D ++ ++L+ + K G ++ +L
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 469 KHVREGDLVPKVLRWKAGMEASIK----NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDA 524
++V L+ + + K N + D +F K ++
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL------- 547
Query: 525 NLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDM 584
SH + +++ +M++ +F PT I+M
Sbjct: 548 ---SHGYYKVGNLKEAFAVKEYMER-----------KGIF-PT--------------IEM 578
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
NT +S L+ L G+ P TY ++++ + G ++A+A EM
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRL----LKQGGYLDI------------- 687
EK ++ + I L ++ + D A +L ++ L GY +
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLK 698
Query: 688 ---------------------VMYNTLINALGKAGRIDEVNKFFEQMKSS---------- 716
++YN I L KAG++++ K F + SS
Sbjct: 699 TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Query: 717 --------------------------GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
GI P++VTYN LI+ K G + A + L +
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818
Query: 751 AGCTPNHVTDTTL 763
G TPN +T TL
Sbjct: 819 KGITPNAITYNTL 831
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDL-NACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
P+ YN I+ LCK GK++DA ++ DL ++ PD +TYT LI GC I+ A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+ ++M G P + YN+L+ L K V A +L K+ Q+G+ + TYN LI GL+
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 387 KNGRPEAAYTLFCDLKKKG 405
K+G A L + +KG
Sbjct: 837 KSGNVAEAMRLKEKMIEKG 855
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + L+ K + E + VF L +KK A D Y + + + G + + +
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA-DQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 262 FHQM------PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
M +C N LI+ CK G++ +A ++ +N + +PDH TY TL+ G
Sbjct: 354 HDNMIEIGVRTNTTIC--NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C+ +D A ++ +QM P + YN LL + + L++ M + GV A
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ + L+ L K G A L+ ++ +G D IT ++++
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N+I +N + L KA + +++F L+ F D + Y I IH GD+ +F+L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M P++ TYN LI LCKLG V A + L P+ TY TLI G K
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 318 TYKIDHATRIFNQMHNNGFRPGT 340
+ + A R+ +M G G+
Sbjct: 838 SGNVAEAMRLKEKMIEKGLVRGS 860
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 118/298 (39%), Gaps = 49/298 (16%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCK---LGKVKDALIVWE 294
Y H + G+L +F++ M P + YN LIS K L KV D +I
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI--- 600
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
+L A P TY LI G C ID A +M G + + + + LF+
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 355 KVSEACQLFEKMA------------QEGVKASCQT------------------------- 377
K+ EAC L +K+ +E ++AS T
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 378 -YNILIHGLIKNGRPEAAYTLFCDLKKKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXX 435
YN+ I GL K G+ E A LF DL +F+ D TY+I++
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
+G + ++VT +L+ G+ K G D RL+ + + + P + + ++ +K+
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDL 296
YN+ I G L + LF + PD TY LI G + A + +++
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
P+ TY LI+G CK +D A R+ +++ G P I YN+L+D L K+ V
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 357 SEACQLFEKMAQEGV 371
+EA +L EKM ++G+
Sbjct: 842 AEAMRLKEKMIEKGL 856
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEM--GEKLCPADIATYNMIIQGLGKIGRADLAS 672
P + YN ++ K G +A + +++ ++ P D TY ++I G G + A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAF 775
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+ D + +G +IV YN LI L K G +D + ++ GI P+ +TYNTLI+
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 733 SKAGLLKDAYKFLKMMLDAG 752
K+G + +A + + M++ G
Sbjct: 836 VKSGNVAEAMRLKEKMIEKG 855
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N ++ GKL A KLF ++ + P YTY ++ G N+A+ + EM
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K +I TYN +I+GL K+G D A +L +L ++G + + YNTLI+ L K+G +
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 705 EVNKFFEQMKSSGI 718
E + E+M G+
Sbjct: 843 EAMRLKEKMIEKGL 856
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+N+ N L+ K+ +E +Q+F + M+ D YN + + G + +
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSR-MNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 422
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
L QM P + TYN L+ ++G D L +W+ + D + +TL++
Sbjct: 423 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 482
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K + A +++ + G TI N ++ L K KV+EA ++ + + K + Q
Sbjct: 483 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 542
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
TY L HG K G + A+ + +++KG F
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 4/182 (2%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKL 283
K+M K+G D + + A GD + L+ + D T N +IS LCK+
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
KV +A + +++N +P TY L G K + A + M G P +Y
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N+L+ FK +++ L ++ G+ + TY LI G G + AY ++ +
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIE 639
Query: 404 KG 405
KG
Sbjct: 640 KG 641
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 569 GQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
G+ V+ SF + + L ++ KG + A +F+ G P + NS++S+ V
Sbjct: 142 GELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY-LDI 687
+KG A + +M D+ T ++++ + G D A G L++
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA---YKF 744
V YN+LIN G ++ + + M G++ +VVTY +LI+ + K GL+++A ++
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 745 LK------------MMLDAGCTPNHVTDTT 762
LK +++D C + D
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAV 351
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 242 YNICIHAFGCWGD--LATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWED 295
+NI I F W D L S +F +M P++ +YN LI+ LC GK+ +A+ + +
Sbjct: 299 FNILIDGF--WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 296 LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK 355
+ + QP+ TY LI G CK + A +F + G P T +YN L+D K K
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
+ + L E+M +EG+ TYN LI GL +NG EAA LF L KG D +T+ I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHI 475
Query: 416 IV 417
++
Sbjct: 476 LM 477
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 151/406 (37%), Gaps = 76/406 (18%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC------KTYKI 321
P++ T+N +I+ LCK GK+ A V ED+ P+ +Y TLI G C K YK
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 322 DH--------------------------------ATRIFNQMHNNGFRPGTIVYNSLLDV 349
D + ++F +M + +P I YNSL++
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
L K+SEA + +KM GV+ + TYN LI+G KN + A +F +K +G
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMK 469
Y++++ G V D+ T L+ G+ ++G + +L
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 470 HVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSH 529
+ L P ++ + ME + KG+ + +L
Sbjct: 461 QLTSKGL-PDLVTFHILMEG---------------YCRKGESRKAAMLL----------- 493
Query: 530 DTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL-FTPTPGQRVQQKGSDSFDIDMV--N 586
+E + L P L + GY + R Q + +++ N
Sbjct: 494 ------KEMSKMGLKPR--HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
L + KGKL A L E G+ P TY + V +G+
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N I +N L+ K DM E +F + +G T YN+ I A+ G + F+L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M PD+ TYNCLI+ LC+ G ++ A +++ L + PD T+ L++G C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCR 482
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG-VKASCQ 376
+ A + +M G +P + YN ++ K + A + +M +E ++ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+YN+L+ G + G+ E A L ++ +KG + ITY I+
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
LD + N I++N L+ L E + K++ G + YN I+ F C D
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA-GVQPNLITYNALINGF-CKND 380
Query: 255 -LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
L + +F + G P YN LI CKLGK+ D + E++ PD TY
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
LI G C+ I+ A ++F+Q+ + G P + ++ L++ + + +A L ++M++
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQ 419
G+K TYNI++ G K G +AA + ++K+ + + ++LQ
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 194/477 (40%), Gaps = 55/477 (11%)
Query: 221 EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP--GPDLCTYNC--L 276
+ +FH + +++ ++ + A+ F F + G L +C L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
+ L K + D V++++ QP+ FT+ +I CKT K++ A + M G
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 337 RPGTIVYNSLLDVLFK---ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
P + YN+L+D K K+ +A + ++M + V + T+NILI G K+
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 394 AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMV 453
+ +F ++ + + I+Y+ ++ G +L+T +L+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 454 GIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPP-------SKKKDYSPMFP 506
G K+ + V+ VP + ++A K ++ + + P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
G ++ +++ L ++ N+++ KL +Q+ S G
Sbjct: 435 DVGTYNCLIAGLC--RNGNIEAA------------------KKLFDQLTSKGLP------ 468
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
D+ + + + KG+ A L + ++ G+ P TYN +M
Sbjct: 469 --------------DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 627 FVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+ K+G A + T+M E+ ++A+YN+++QG + G+ + A+ +L+ +L++G
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 175/433 (40%), Gaps = 45/433 (10%)
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
G++ + L+ L K + ++ ++++M + ++ + T+N++I+ L K G+ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 395 YTLFCDLKKKGQFVDGITYSIIV---LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+ D+K G + ++Y+ ++ + +L T L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ G K + ++ K + + D+ P V+ + + + + G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING---------------LCNGGKI 347
Query: 512 SEIMSI----LTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
SE +S+ ++ NL +++ I ++ L +D + VK G
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDM-LKEALDMFGS-VKGQG-------AV 398
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
P R M N + + GK+ L E G+ P TYN +++
Sbjct: 399 PTTR------------MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
+ G A + ++ K P D+ T++++++G + G + A+ +L + K G
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQM-KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
+ YN ++ K G + QM K + +V +YN L++ +S+ G L+DA L
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565
Query: 747 MMLDAGCTPNHVT 759
ML+ G PN +T
Sbjct: 566 EMLEKGLVPNRIT 578
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 28/280 (10%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
S+N L++ L E + + D ++ G P + YN+L+ +N+ + A
Sbjct: 333 SYNSLINGLCNGGKISEAISMRD-----KMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F + + + +N L+ A K K++ + M+++
Sbjct: 388 MF----------------GSVKGQGAVPTTRMYNMLIDAYCKLG-KIDDGFALKEEMERE 430
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG---PDLCTYNCLISVLCKLGKVKDAL 290
G D YN I G++ + LF Q+ PDL T++ L+ C+ G+ + A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAA 490
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH-NNGFRPGTIVYNSLLDV 349
++ ++++ +P H TY +++G CK + AT + QM R YN LL
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
+ K+ +A L +M ++G+ + TY I+ ++ G
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG---LGKIGRAD 669
+ P +T+N ++++ K G N+A ++ +M C ++ +YN +I G LG G+
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A A+L +++ ++ +N LI+ K + K F++M + P+V++YN+LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G + +A M+ AG PN +T L
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N ++ G + A KLF+ T G+ P T++ +M + +KG +A ++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY-LDIVMYNTLINALGK 699
EM + TYN++++G K G A+ + ++ K+ +++ YN L+ +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
G++++ N +M G+ P+ +TY + E G + D
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 605 FEIFTEAGVDPVSYTYN-------SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
FE F +G Y Y +M + +K+ + + EM + ++ T+N+
Sbjct: 173 FEAFKRSGY----YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNV 228
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA---LGKAGRIDEVNKFFEQMK 714
+I L K G+ + A +++ + G ++V YNTLI+ LG G++ + + ++M
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ ++P++ T+N LI+ K L + K K MLD PN ++ +L
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT-YNSIMS 625
P + +Q S D D+ + S + +S++ +L + + Y+ S +
Sbjct: 66 NPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLD 125
Query: 626 SFVKKGYFNEAWAII--TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGG 683
FV+ G ++ +I M + +C I +M++ R +L R G
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGY 184
Query: 684 YLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
L + L+ AL K R +V +++M I P+V T+N +I K G + A
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 744 FLKMMLDAGCTPNHVTDTTL 763
++ M GC+PN V+ TL
Sbjct: 245 VMEDMKVYGCSPNVVSYNTL 264
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +AFN LL AL K+ + Q+VF + D+ F D+ Y+I + +G +L + +
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENMRDR--FTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M PD+ TY+ ++ +LCK G+V +AL + ++ +P F Y+ L+
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+++ A F +M +G + V+NSL+ KA ++ ++ ++M +GV + ++
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
NI++ LI+ G + A+ +F + K + D TY++++
Sbjct: 380 CNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADTYTMVI 418
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+L +N L+S LCK V+ A V+E++ PD TY+ L++G K + A +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +M + G P + Y+ ++D+L KA +V EA + M K + Y++L+H
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
R E A F ++++ G D ++ ++
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 569 GQRVQQKGSDSFDIDMVNTFLSIFLAKGK---LSLACKLFEIFTEAGVDPVSYTYNSIMS 625
Q V + D F D T+ + GK L A ++F +AG P TY+ ++
Sbjct: 222 AQEVFENMRDRFTPD-SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 626 SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
K G +EA I+ M +C Y++++ G R + A + + G
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
D+ ++N+LI A KA R+ V + ++MKS G+ P+ + N ++ + G +A+
Sbjct: 341 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF 400
Query: 746 KMMLDAGCTPNHVTDTTL 763
+ M+ C P+ T T +
Sbjct: 401 RKMIKV-CEPDADTYTMV 417
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 63/318 (19%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN LL +L S N + ++ + ++ R TP Y+ LL + ++P A
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRF------TPDSKTYSILLEGWGKEPNLPKARE 258
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++I D+ + + + ++ ++ L KA E + MD
Sbjct: 259 VFREMI----------------DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS-MDPS 301
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDA 289
T+ Y++ +H +G L + F +M D+ +N LI CK ++K+
Sbjct: 302 ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
Query: 290 LIVWEDLNA---------C-------------------------AHQPDHFTYTTLIQGC 315
V +++ + C +PD TYT +I+
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMF 421
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
C+ +++ A +++ M G P ++ L++ L + +AC L E+M + G++ S
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 376 QTYNILIHGLIKNGRPEA 393
T+ L LIK R +
Sbjct: 482 VTFGRLRQLLIKEEREDV 499
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + N+ + F ++ ++ + GV P S + N I+ +++G +EA+ +
Sbjct: 341 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF 400
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M K+C D TY M+I+ + + A + + K+G + + ++ LIN L +
Sbjct: 401 RKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEE 459
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
+ E+M GI P VT+ L ++ K +D KFL
Sbjct: 460 RTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE-REDVLKFL 503
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S ++ FN L+ A KA+ +V K M KG ++ NI + G+
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVL-KEMKSKGVTPNSKSCNIILRHLIERGEKD 394
Query: 257 TSFSLFHQMPG---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+F +F +M PD TY +I + C+ +++ A VW+ + P T++ LI
Sbjct: 395 EAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 454
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
G C+ A + +M G RP + + L +L K + L EKM
Sbjct: 455 GLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 284 GKVKDALIVWEDLNACAHQP--DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K++ ++W+ +NA + + T+ +++ + K+D A FN M P +
Sbjct: 145 AKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 204
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
+N LL L K+ V +A ++FE M ++ +TY+IL+ G K A +F ++
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 402 KKKGQFVDGITYSIIV 417
G D +TYSI+V
Sbjct: 264 IDAGCHPDIVTYSIMV 279
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/484 (20%), Positives = 179/484 (36%), Gaps = 106/484 (21%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P L T+N L++ LCK G ++ A + ++ P+ +Y TLI+G C +D A +
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 328 FNQMHNNGFRPGTIVYN---------------------------------------SLLD 348
FN M+ G RP + N L+D
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
FK V +A +++++M+Q+ V A YN++I GL +G AAY CD+ K+G
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 409 DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLM 468
D TY+ ++ G D ++ ++ G+ HG + + +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 469 KHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDS 528
+ + L+P+VL W ++ + GD S +S+L
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDG---------------YGRYGDTSSALSVL---------- 428
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTF 588
N + S G ++T N
Sbjct: 429 -----------------------NLMLSYGVKPNVYTN-------------------NAL 446
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
+ ++ G+L A + + P + TYN ++ + G+ A+ + EM + C
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
DI TY +++GL GR A ++L R+ G +D V + L + R E
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYL 566
Query: 709 FFEQ 712
+++
Sbjct: 567 VYKK 570
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 4/249 (1%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKL 283
K M +K D+ YN+ I G++ ++ M PD+ TYN LIS LCK
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
GK +A + + PD +Y +IQG C ++ A M + P +++
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N ++D + S A + M GVK + T N LIHG +K GR A+ + +++
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 404 KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
D TY++++ RG D++T T L+ G+ GR
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Query: 464 TDRLMKHVR 472
+ L+ ++
Sbjct: 529 AESLLSRIQ 537
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ NT +S +GK AC L GV P +Y I+ G N A +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M + ++ +N++I G G+ G A ++L+ +L G ++ N LI+ K
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
GR+ + +M+S+ I+PD TYN L+ G L+ A++ ML GC P+ +T
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Query: 761 TTL 763
T L
Sbjct: 514 TEL 516
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+M S K G +A + EM +K PAD YN+II+GL G A + ++K+G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D+ YNTLI+AL K G+ DE M++ G+ PD ++Y +I+ G + A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 743 KF 744
+F
Sbjct: 391 EF 392
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + G S A + + GV P YT N+++ +VK G +AW + EM
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D TYN+++ +G LA + D +L++G DI+ Y L+ L GR+ +
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
+++++GI D V + L + +++ +AY K L
Sbjct: 529 AESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 4/196 (2%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
DI + + G + A ++++ ++ V S YN I+ G A+
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ +M ++ D+ TYN +I L K G+ D A + + G D + Y +I L
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G ++ N+F M S + P+V+ +N +I+ + + G A L +ML G PN T
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYT 442
Query: 760 DTTL--DYL--GREID 771
+ L Y+ GR ID
Sbjct: 443 NNALIHGYVKGGRLID 458
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL--AT 257
N + +N L+ AL K + K + H M G A D Y + I GD+ A
Sbjct: 332 NPDVFTYNTLISALCK-EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 258 SFSLFHQMPG--PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
F L P++ +N +I + G AL V + + +P+ +T LI G
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K ++ A + N+M + P T YN LL + A QL+++M + G +
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
TY L+ GL GR + A +L ++ G +D + + I+
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF-NEAWAIITEM- 643
NT + + + A LF + G+ P T N I+ + +KG N ++ E+
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 644 --GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+ P DI +++ K G A + + ++ D V+YN +I L +G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ F M G+NPDV TYNTLI K G +A M + G P+ ++
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 43/230 (18%)
Query: 577 SDSFDID----MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
+ SFD D + ++ + +GKL A L + +GV P T+N +++ K GY
Sbjct: 112 TKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGY 171
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG---------- 682
+A ++ EM E + +YN +I+GL + D A + + + K G
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 683 -----------------------------GYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
LDIV+ L+++ K G + + + +++M
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ D V YN +I +G + AY F+ M+ G P+ T TL
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
+N+ I +G +GD +++ S+ + M P++ T N LI K G++ DA V ++
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
+ PD TY L+ C + A +++++M G +P I Y L+ L ++
Sbjct: 468 STKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLK 527
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+A L ++ G+ + IL + RP AY ++
Sbjct: 528 KAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVY 568
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF---GCWGD---- 254
N +++N L+ L + + +F+ M+K G + NI +HA G G+
Sbjct: 190 NCVSYNTLIKGLCSVNNVDKALYLFNT-MNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 255 LATSFSLFHQMPGP-DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
L Q P D+ L+ K G V AL VW++++ D Y +I+
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G C + + A M G P YN+L+ L K K EAC L M GV
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 374 SCQTYNILIHGLIKNG 389
+Y ++I GL +G
Sbjct: 369 DQISYKVIIQGLCIHG 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
++++++ C K+D A + +M +G PG I +N LL+ L KA + +A L +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ G +C +YN LI GL + A LF + K G + +T +IIV
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIV 233
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLG 284
LM G + + N IH + G L ++ + ++M PD TYN L+ C LG
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
++ A +++++ QPD TYT L++G C ++ A + +++ G + +
Sbjct: 490 HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFL 549
Query: 345 SLLDVLFKATKVSEACQLFEK-MAQEGVKASC 375
L + + EA +++K +A SC
Sbjct: 550 ILAKKYTRLQRPGEAYLVYKKWLATRNRGVSC 581
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 120/616 (19%), Positives = 225/616 (36%), Gaps = 98/616 (15%)
Query: 112 LHPQS-FNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPL 170
+H +S + L H L + F Q+LD + L P
Sbjct: 73 IHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPD--------------------- 111
Query: 171 AFSIFLKLIELFXXXXXXXXXXAALDSNSN----SNSIAFNQLLVALRKADMKLEFQQVF 226
+IF+ +I F + +D S + FN +L L K D+ + ++ F
Sbjct: 112 -DAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA-REFF 169
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCK 282
+ M G D + Y I + + F L M P+ YN L+ LCK
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
GKV A L + +P+ T+ LI C K+ + + + + GF P +
Sbjct: 230 NGKVGRA----RSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
+++VL +VSEA ++ E++ +G K N L+ G G+ A F +++
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
+KG + TY++++ + T +L+ G+ GR D
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 463 WTDRLMKHVREGDLVP---------------KVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
++++ +++ D V K RW+ +E +K +FP
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK--------MEKLFPR 457
Query: 508 KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
D S +++ + +D T + G+ G S + +
Sbjct: 458 AVDRS--FKLISLCEKGGMDDLKTAYDQMIGE-----------------GGVPSIIVSHC 498
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
R Q G ++++N ++ G P S T+N+++ F
Sbjct: 499 LIHRYSQHGKIEESLELINDMVT--------------------RGYLPRSSTFNAVIIGF 538
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K+ + +M E+ C D +YN +++ L G A + R++++ D
Sbjct: 539 CKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDP 598
Query: 688 VMYNTLINALGKAGRI 703
M+++L+ L + I
Sbjct: 599 SMWSSLMFCLSQKTAI 614
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE----------------- 645
KL +I +GV P + YN+++ + K G A ++++EM E
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQ 262
Query: 646 KLCPA--------------DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
KL + D+ T +++ L GR A +L+R+ +GG +D+V N
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
TL+ G++ +FF +M+ G P+V TYN LI + G+L A M
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTD 382
Query: 752 GCTPNHVTDTTL 763
N T TL
Sbjct: 383 AIRWNFATFNTL 394
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N +S + + KL + L E G P T +M +G +EA ++ +
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D+ N +++G +G+ +A + ++G ++ YN LI G +D
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
F MK+ I + T+NTLI S G D K L+MM D+
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDR 677
TY ++ F+ + ++ EM + + P D A + II+G G+ +++D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF-EQMKSSGINPDVVTYNTLIEVHSKAG 736
+ K G + ++N++++ L K ID +FF +M +SGI+ DV TY L++ S
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ D +K L++M +G PN V TL
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTE------AGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
NT + G+ K+ E+ + A +DP YN ++ F K+ + +A
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEF 447
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ +M EKL P + +I K G DL +A D+++ +GG I++ + LI+ +
Sbjct: 448 LLKM-EKLFPRAVDRSFKLISLCEKGGMDDLKTA-YDQMIGEGGVPSIIVSHCLIHRYSQ 505
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
G+I+E + M + G P T+N +I K + + KF++ M + GC P+
Sbjct: 506 HGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPD 562
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 588 FLSIFLAKGKLSLACKLF---EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
F++I G+ L ++ ++ ++ G+ P +NSI+ VK+ +M
Sbjct: 115 FVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMM 174
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
D+ TY ++++GL R +L + G + V+YNTL++AL K G++
Sbjct: 175 ASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG 234
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+MK P+ VT+N LI + L + L+ G P+ VT T +
Sbjct: 235 RARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ V + + +G++S A ++ E G N+++ + G A
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM K ++ TYN++I G +G D A + + + +NTLI L
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 701 GRIDEVNKFFEQMKSSGI--NPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
GR D+ K E M+ S + YN +I K +DA +FL M
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N+ LSI L +G+ +A LF E+ GV P SYT+N++++ F K +EA+ I +M
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGG--YLDIVMYNTLINALGKAGR 702
C D+ TYN II GL + G+ +A +L +LK+ + ++V Y TL+
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
IDE F M S G+ P+ VTYNTLI+ S+A
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ FN LL L K +F ++ G D++ +N I+ F + +F +F
Sbjct: 174 LTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFK 233
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDL--NACAHQPDHFTYTTLIQGCCK 317
M PD+ TYN +I LC+ GKVK A V + A P+ +YTTL++G C
Sbjct: 234 DMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCM 293
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL-------FEKMAQEG 370
+ID A +F+ M + G +P + YN+L+ L +A + E + F A +
Sbjct: 294 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDA 353
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
T+NILI G +AA +F ++ D +YS+++
Sbjct: 354 C-----TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
+N I ++G G S LF M P + T+N L+S+L K G+ A +++++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 298 AC-AHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
PD +T+ TLI G CK +D A RIF M P + YN+++D L +A KV
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 357 SEACQLFEKMAQEG--VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
A + M ++ V + +Y L+ G + A +F D+ +G + +TY+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 415 IIV 417
++
Sbjct: 321 TLI 323
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 195/497 (39%), Gaps = 98/497 (19%)
Query: 10 LLLVASITNSLSKSKSK---SCAPVLNLLP-----------PQHKQLLTEPVILQILSNP 55
+L A +TN +KSK S A +N P Q ++ +LQ L
Sbjct: 19 VLRAAKVTNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLI 78
Query: 56 TLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDA---VVL 112
+ P+ L FF+W S+ ++ L+L L R SI++ + V L
Sbjct: 79 KV-PADGLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKL 136
Query: 113 HPQSFNPLLHSLIISHNFHETLQILDYIQQRH--------------LLQPGCTPL----- 153
+ FN L+ S + F E++++ ++Q LL+ G T +
Sbjct: 137 QDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLF 196
Query: 154 --------------IYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDS-- 197
+N+L+ +N+ + AF IF K +EL+ +D
Sbjct: 197 DEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIF-KDMELYHCNPDVVTYNTIIDGLC 255
Query: 198 NSNSNSIAFNQLLVALRKAD-----------------MKLEFQQ---VFHKLMDKKGFAL 237
+ IA N L L+KA MK E + VFH ++ + G
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR-GLKP 314
Query: 238 DTWGYNICI------HAFGCWGDLAT----SFSLFHQMPGPDLCTYNCLISVLCKLGKVK 287
+ YN I H + D+ +F+ F PD CT+N LI C G +
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTF----APDACTFNILIKAHCDAGHLD 370
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF-------RPGT 340
A+ V++++ PD +Y+ LI+ C + D A +FN++ +P
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA 430
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
YN + + L K +A ++F ++ + GV+ +Y LI G + G+ + AY L
Sbjct: 431 AAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHCREGKFKPAYELLVL 489
Query: 401 LKKKGQFVDGITYSIIV 417
+ ++ D TY +++
Sbjct: 490 MLRREFVPDLETYELLI 506
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+NS++ S+ G F E+ + M + + T+N ++ L K GR +A + D +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 680 KQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+ G D +NTLIN K +DE + F+ M+ NPDVVTYNT+I+ +AG +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 739 KDAYKFLKMMLDAGCT--PNHVTDTTL 763
K A+ L ML PN V+ TTL
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTL 287
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ + + G + KLF+ + G+ P T+NS++S +K+G A + EM
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 646 KL-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
D T+N +I G K D A I + D+V YNT+I+ L +AG++
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 705 EVNKFFEQM--KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
+ M K++ ++P+VV+Y TL+ + + +A ML G PN VT T
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 763 L 763
L
Sbjct: 322 L 322
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 172/467 (36%), Gaps = 84/467 (17%)
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
+NSL+ A E+ +LF+ M Q G+ S T+N L+ L+K GR A+ LF +++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 403 KKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
+ TY G D T +L+ G K+ D
Sbjct: 201 R--------TY--------------------------GVTPDSYTFNTLINGFCKNSMVD 226
Query: 463 WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQ 522
R+ K + P V+ + ++ + G ++L+G
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCR---------------AGKVKIAHNVLSGML 271
Query: 523 DANLDSHDTKIE----------DEEGDEWSLSPHMDKLANQVKSSG--YASQLFTPTPGQ 570
D H + +E DE L H D L+ +K + Y + + +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH-DMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 571 RVQQ------KGSDSF-----DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
R + G+D+F D N + G L A K+F+ + P S +
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKL-------CPADIATYNMIIQGLGKIGRADLAS 672
Y+ ++ + + F+ A + E+ EK C A YN + + L G+ A
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+ +L+K+G D Y TLI + G+ + M PD+ TY LI+
Sbjct: 451 KVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKAS 779
K G A+ L+ ML + P TT + E+ K ++ S
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLP---VATTFHSVLAELAKRKFANES 553
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGV-DPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N A GK A K+F + GV DP SY ++++ ++G F A+ ++ M
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSY--KTLITGHCREGKFKPAYELLVLML 491
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI-VMYNTLINALGKAGRI 703
+ D+ TY ++I GL KIG A LA L R+L+ YL + +++++ L K
Sbjct: 492 RREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR-SSYLPVATTFHSVLAELAKRKFA 550
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+E M I ++ ++ + + + A+ ++++ D G
Sbjct: 551 NESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG 599
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
KL + G P + TYN ++ S+ + Y NEA + +M E C D TY +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K G D+A + R+ G D Y+ +IN LGKAG + +K F +M G P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLG 767
VTYN ++++H+KA ++A K + M +AG P+ VT ++ LG
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ ++ +L + F ++LD +++ GC P + YN L+ + R N++ A +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLD-----EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ E + + + + L+ KA L+ ++ M
Sbjct: 421 VFNQMQE----------------AGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAG 463
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G + DT+ Y++ I+ G G L + LF +M P+L TYN ++ + K ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L ++ D+ +PD TY+ +++ ++ A +F +M + P VY L+D+
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
KA V +A Q ++ M G++ + T N L+ ++ + AY L ++ G
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 410 GITYSIIV 417
TY++++
Sbjct: 644 LQTYTLLL 651
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ + + F ++ EM C + TYN +I G+ + A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + G D V Y TLI+ KAG +D +++M++ G++PD TY+ +I KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 738 LKDAYKFLKMMLDAGCTPNHVT 759
L A+K M+D GCTPN VT
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVT 506
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + I G L +A +++ G+ P ++TY+ I++ K G+ A + EM ++
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
C ++ TYN+++ K A + + G D V Y+ ++ LG G ++E
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ PD Y L+++ KAG ++ A+++ + ML AG PN T +L
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
NQ+L + L F F+ L + GF D Y + G L +M
Sbjct: 335 NQVLKQMNDYGNALGF---FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P+ TYN LI + + +A+ V+ + +PD TY TLI K +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A ++ +M G P T Y+ +++ L KA + A +LF +M +G + TYNI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K + A L+ D++ G D +TYSI++
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 570 QRVQQKG--SDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
QR+Q G D+F ++ ++ G L A KLF + G P TYN +M
Sbjct: 458 QRMQAGGLSPDTFTYSVI---INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K + A + +M D TY+++++ LG G + A A+ + ++ D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+Y L++ GKAG +++ ++++ M +G+ P+V T N+L+ + + +AY+ L+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 748 MLDAGCTPNHVTDTTL 763
ML G P+ T T L
Sbjct: 635 MLALGLRPSLQTYTLL 650
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 678 LLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
L +Q G+ D Y T++ LG+A + +NK ++M G P+ VTYN LI + +A
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
L +A M +AGC P+ VT TL
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL+ AG +P TY+ +M GY EA A+ TEM +K D Y +++
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GK G + A +L G ++ N+L++ + +I E + + M + G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
+ TY L+ + G K F ++ + P H+ + G + + +R +
Sbjct: 643 SLQTYTLLLSCCTD-GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701
Query: 781 LN 782
L+
Sbjct: 702 LD 703
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
KL + G P + TYN ++ S+ + Y NEA + +M E C D TY +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K G D+A + R+ G D Y+ +IN LGKAG + +K F +M G P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLG 767
VTYN ++++H+KA ++A K + M +AG P+ VT ++ LG
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ ++ +L + F ++LD +++ GC P + YN L+ + R N++ A +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLD-----EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ E + + + + L+ KA L+ ++ M
Sbjct: 421 VFNQMQE----------------AGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAG 463
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G + DT+ Y++ I+ G G L + LF +M P+L TYN ++ + K ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L ++ D+ +PD TY+ +++ ++ A +F +M + P VY L+D+
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
KA V +A Q ++ M G++ + T N L+ ++ + AY L ++ G
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 410 GITYSIIV 417
TY++++
Sbjct: 644 LQTYTLLL 651
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ + + F ++ EM C + TYN +I G+ + A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + G D V Y TLI+ KAG +D +++M++ G++PD TY+ +I KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 738 LKDAYKFLKMMLDAGCTPNHVT 759
L A+K M+D GCTPN VT
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVT 506
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + I G L +A +++ G+ P ++TY+ I++ K G+ A + EM ++
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
C ++ TYN+++ K A + + G D V Y+ ++ LG G ++E
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ PD Y L+++ KAG ++ A+++ + ML AG PN T +L
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
NQ+L + L F F+ L + GF D Y + G L +M
Sbjct: 335 NQVLKQMNDYGNALGF---FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P+ TYN LI + + +A+ V+ + +PD TY TLI K +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A ++ +M G P T Y+ +++ L KA + A +LF +M +G + TYNI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K + A L+ D++ G D +TYSI++
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 570 QRVQQKG--SDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
QR+Q G D+F ++ ++ G L A KLF + G P TYN +M
Sbjct: 458 QRMQAGGLSPDTFTYSVI---INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K + A + +M D TY+++++ LG G + A A+ + ++ D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+Y L++ GKAG +++ ++++ M +G+ P+V T N+L+ + + +AY+ L+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 748 MLDAGCTPNHVTDTTL 763
ML G P+ T T L
Sbjct: 635 MLALGLRPSLQTYTLL 650
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 678 LLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
L +Q G+ D Y T++ LG+A + +NK ++M G P+ VTYN LI + +A
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
L +A M +AGC P+ VT TL
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL+ AG +P TY+ +M GY EA A+ TEM +K D Y +++
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GK G + A +L G ++ N+L++ + +I E + + M + G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
+ TY L+ + G K F ++ + P H+ + G + + +R +
Sbjct: 643 SLQTYTLLLSCCTD-GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701
Query: 781 LN 782
L+
Sbjct: 702 LD 703
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
KL + G P + TYN ++ S+ + Y NEA + +M E C D TY +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K G D+A + R+ G D Y+ +IN LGKAG + +K F +M G P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLG 767
VTYN ++++H+KA ++A K + M +AG P+ VT ++ LG
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
++ ++ +L + F ++LD +++ GC P + YN L+ + R N++ A +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLD-----EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ E + + + + L+ KA L+ ++ M
Sbjct: 421 VFNQMQE----------------AGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAG 463
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G + DT+ Y++ I+ G G L + LF +M P+L TYN ++ + K ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L ++ D+ +PD TY+ +++ ++ A +F +M + P VY L+D+
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
KA V +A Q ++ M G++ + T N L+ ++ + AY L ++ G
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 410 GITYSIIV 417
TY++++
Sbjct: 644 LQTYTLLL 651
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ + + F ++ EM C + TYN +I G+ + A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + G D V Y TLI+ KAG +D +++M++ G++PD TY+ +I KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 738 LKDAYKFLKMMLDAGCTPNHVT 759
L A+K M+D GCTPN VT
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVT 506
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + I G L +A +++ G+ P ++TY+ I++ K G+ A + EM ++
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
C ++ TYN+++ K A + + G D V Y+ ++ LG G ++E
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ PD Y L+++ KAG ++ A+++ + ML AG PN T +L
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
NQ+L + L F F+ L + GF D Y + G L +M
Sbjct: 335 NQVLKQMNDYGNALGF---FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P+ TYN LI + + +A+ V+ + +PD TY TLI K +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A ++ +M G P T Y+ +++ L KA + A +LF +M +G + TYNI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K + A L+ D++ G D +TYSI++
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 570 QRVQQKG--SDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
QR+Q G D+F ++ ++ G L A KLF + G P TYN +M
Sbjct: 458 QRMQAGGLSPDTFTYSVI---INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K + A + +M D TY+++++ LG G + A A+ + ++ D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+Y L++ GKAG +++ ++++ M +G+ P+V T N+L+ + + +AY+ L+
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 748 MLDAGCTPNHVTDTTL 763
ML G P+ T T L
Sbjct: 635 MLALGLRPSLQTYTLL 650
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 678 LLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
L +Q G+ D Y T++ LG+A + +NK ++M G P+ VTYN LI + +A
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
L +A M +AGC P+ VT TL
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL+ AG +P TY+ +M GY EA A+ TEM +K D Y +++
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GK G + A +L G ++ N+L++ + +I E + + M + G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
+ TY L+ + G K F ++ + P H+ + G + + +R +
Sbjct: 643 SLQTYTLLLSCCTD-GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNF 701
Query: 781 LN 782
L+
Sbjct: 702 LD 703
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/507 (21%), Positives = 207/507 (40%), Gaps = 64/507 (12%)
Query: 149 GCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAF 206
GC P + YNSL+ RN I A S+ L+ + A+ + ++F
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSA-SLVLESLR------------ASHGFICKPDIVSF 132
Query: 207 NQLLVALRKADMKLE---FQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
N L K M E + V K TW I F G+L + FH
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTW-----IDTFCKSGELQLALKSFH 187
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
M P++ T+ CLI CK G ++ A+ +++++ + TYT LI G CK
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
++ A ++++M + P ++VY +++D F+ A + KM +G++ Y
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
++I GL NG+ + A + D++K D + ++ ++ R
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
GF D+V +++++ GI K+G+ + D++ VL ++A K
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL-----IDALCK------- 415
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
+GDF E+ + + +A L D++ + + L Q G
Sbjct: 416 --------EGDFIEVERLFSKISEAGLVP----------DKFMYTSWIAGLCKQ----GN 453
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
F R+ Q+G D+ T + +KG + A ++F+ +G+ P S
Sbjct: 454 LVDAFKLKT--RMVQEGL-LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAV 510
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEK 646
++ ++ ++ K+G A ++ +M +
Sbjct: 511 FDLLIRAYEKEGNMAAASDLLLDMQRR 537
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 215/518 (41%), Gaps = 66/518 (12%)
Query: 246 IHAFGC-WGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACA 300
+ +F C G + + + H MP PD+ +YN LI C+ G ++ A +V E L A +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA-S 120
Query: 301 H----QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
H +PD ++ +L G K +D ++ + P + Y++ +D K+ ++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
A + F M ++ + + T+ LI G K G E A +L+ ++++ ++ +TY
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY--- 236
Query: 417 VLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDL 476
T+L+ G K G + + + E +
Sbjct: 237 --------------------------------TALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 477 VPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKG-------DFSEIMSILTG-SQDANLDS 528
P L + ++ + S D + F +K D + I++G + L
Sbjct: 265 EPNSLVYTTIIDGFFQRGDS---DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 529 HDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPG-QRVQQKGSDSFDIDMVNT 587
+ED E + L P M + + + ++ ++ ++G + D+ ++T
Sbjct: 322 ATEIVEDMEKSD--LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP-DVVALST 378
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
+ G+L A F I E D + Y ++ + K+G F E + +++ E
Sbjct: 379 MIDGIAKNGQLHEAIVYFCI--EKANDVM---YTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
D Y I GL K G A + R++++G LD++ Y TLI L G + E
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEAR 493
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
+ F++M +SGI+PD ++ LI + K G + A L
Sbjct: 494 QVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 200/508 (39%), Gaps = 47/508 (9%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-------PDLC 271
+++F + M + G D YN I GD+ ++ + + PD+
Sbjct: 71 QVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIV 130
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
++N L + K+ K+ D + V+ + P+ TY+T I CK+ ++ A + F+ M
Sbjct: 131 SFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+ P + + L+D KA + A L+++M + + + TY LI G K G
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+ A ++ + + + + Y+ I+ +G +D+ +
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ G+ +G+ +++ + + DLVP ++ + M A K
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK------------------- 350
Query: 512 SEIMSILTGSQDANLDSHDTKIEDE-EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ 570
+G A ++ + IE E D +LS +D +A QL
Sbjct: 351 -------SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN-------GQLHEAIVYF 396
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
++ K +D M + +G +LF +EAG+ P + Y S ++ K+
Sbjct: 397 CIE-KANDV----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
G +A+ + T M ++ D+ Y +I GL G A + D +L G D ++
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGI 718
+ LI A K G + + M+ G+
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
+ G L +A L++ + TY +++ F KKG A + + M E +
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
Y II G + G +D A L ++L QG LDI Y +I+ L G++ E + E
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M+ S + PD+V + T++ + K+G +K A +++ G P+ V +T+
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
L+ K G P ++NS++S K G A I+ M C D+ +YN +I
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 660 QGLGKIGRADLASAILDRLLKQGGYL---DIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
G + G AS +L+ L G++ DIV +N+L N K +DEV + M
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+P+VVTY+T I+ K+G L+ A K M +PN VT T L
Sbjct: 159 -CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 2/202 (0%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+ F ++ A K+ ++HKL+++ GF D + I G L + F
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 264 QMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
D+ Y LI LCK G + ++ ++ PD F YT+ I G CK +
Sbjct: 398 IEKANDV-MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A ++ +M G + Y +L+ L + EA Q+F++M G+ +++LI
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 384 GLIKNGRPEAAYTLFCDLKKKG 405
K G AA L D++++G
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRG 538
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P ++NS+ + F K +E + + M K C ++ TY+ I K G LA
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ + ++V + LI+ KAG ++ +++M+ ++ +VVTY LI+ K
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G ++ A + M++ PN + TT+
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 191/463 (41%), Gaps = 33/463 (7%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
Q H +++ + +++ A + M N G P +I N +L++ + + A
Sbjct: 144 QKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 203
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
+F++M+ GV +Y +++ G ++G+ + A + ++G D T ++I+
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVL 481
GF +L+ TSL+ G+ K G +++ + P V
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 482 RWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL-TGSQDANLDSHDTKIEDEEGDE 540
A ++ K ++K F + ++ + + N+ ++ + I +
Sbjct: 324 THTALIDGLCKRGWTEKA-----------FRLFLKLVRSDTYKPNVHTYTSMIGGYCKE- 371
Query: 541 WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL 600
DKL A LF+ R++++G +++ T ++ G
Sbjct: 372 -------DKL-------NRAEMLFS-----RMKEQGLFP-NVNTYTTLINGHCKAGSFGR 411
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A +L + + G P YTYN+ + S KK EA+ ++ + AD TY ++IQ
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
K + A A R+ K G D+ + N LI A + ++ E + F+ + S G+ P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TY ++I + K G + A K+ M GC P+ T +L
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 176/416 (42%), Gaps = 33/416 (7%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD +Y ++ + GK+++A + PD+ T T ++ C+ ++ A
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +M + GF+P I + SL+D L K + +A ++ E+M + G K + T+ LI GL K
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGI-TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
G E A+ LF L + + + TY+ ++ +G ++
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFP 506
T T+L+ G K G + LM + + +P + + A +++ KK +P
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC------KKSRAP--- 445
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
E +L + L++ +G +++ N + A F
Sbjct: 446 ------EAYELLNKAFSCGLEA--------DGVTYTILIQEQCKQNDINQ---ALAFFC- 487
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
R+ + G ++ D+ + N ++ F + K+ + +LF++ G+ P TY S++S
Sbjct: 488 ----RMNKTGFEA-DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+ K+G + A M C D TY +I GL K D A + + ++ +G
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 8/290 (2%)
Query: 195 LDSNSNSNSIAFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
+D N I F L+ L +K +K F+ + + M + G+ + + + I G
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEML--EEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 254 DLATSFSLFHQMP-----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
+F LF ++ P++ TY +I CK K+ A +++ + P+ TY
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
TTLI G CK A + N M + GF P YN+ +D L K ++ EA +L K
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
G++A TY ILI K A FC + K G D +I++
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
G + T TS++ K G D + +++ VP
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 27/308 (8%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYN--SLLIASLRNNHIPLAFS 173
+F L+ L + + ++L+ +++ G P +Y +L+ + AF
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLE-----EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+FLKL+ N + ++ K D KL ++ M ++
Sbjct: 344 LFLKLVR---------------SDTYKPNVHTYTSMIGGYCKED-KLNRAEMLFSRMKEQ 387
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
G + Y I+ G ++ L + M P++ TYN I LCK + +A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ +C + D TYT LIQ CK I+ A F +M+ GF + N L+
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
+ K+ E+ +LF+ + G+ + +TY +I K G + A F ++K+ G D
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 410 GITYSIIV 417
TY ++
Sbjct: 568 SFTYGSLI 575
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 7/185 (3%)
Query: 227 HKLMDKK---GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
++L++K G D Y I I D+ + + F +M D+ N LI+
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
C+ K+K++ +++ + + P TYT++I CK ID A + F+ M +G P
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
+ Y SL+ L K + V EAC+L+E M G+ T L + K A L
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 400 DLKKK 404
L KK
Sbjct: 628 PLDKK 632
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 13/216 (6%)
Query: 549 KLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLA-KGKLSLACKLFEI 607
KL +V S+ Y F TP + +N L + ++ +G L A +LF+
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPK------------HLNRILDVLVSHRGYLQKAFELFKS 180
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
GV P + +YN +M +F + A+ + +M E+ D+ +Y ++IQG + G+
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
+ A +LD +L +G D + Y TL+N+L + ++ E K +MK G NPD+V YNT
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+I + DA K L ML GC+PN V+ TL
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+D + F KG+++ A +L + G P +Y ++++S +K EA+ ++
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M K C D+ YN +I G + RA A +LD +L G + V Y TLI L
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
G DE K+ E+M S G +P N L++ G +++A +++++ G T
Sbjct: 344 GMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 12/241 (4%)
Query: 159 LIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAA----LDSNSNSNSIAFNQLLVALR 214
++A R++ PL IF LI+++ + L+ N N++L L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL- 164
Query: 215 KADMKLEFQQVFHKLMDKK--GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----P 268
+ Q+ F + G +T YN+ + AF DL+ ++ LF +M P
Sbjct: 165 -VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ +Y LI C+ G+V A+ + +D+ PD +YTTL+ C+ ++ A ++
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G P + YN+++ + + +A ++ + M G + +Y LI GL
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 389 G 389
G
Sbjct: 344 G 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + F LS+A +LF E V P +Y ++ F +KG N A ++ +M
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D +Y ++ L + + A +L R+ +G D+V YNT+I + R +
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
K + M S+G +P+ V+Y TLI G+ + K+L+ M+ G +P+
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 202 NSIAFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N+ ++N L+ A D+ + +Q +F K++++ D Y I I F G + +
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQ-LFGKMLERD-VVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDA--LIVWEDLNACAHQPDHFTYTTLIQG 314
L M PD +Y L++ LC+ ++++A L+ L C PD Y T+I G
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC--NPDLVHYNTMILG 304
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ + A ++ + M +NG P ++ Y +L+ L E + E+M +G
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
N L+ G G+ E A + + K G+ + T+ +++
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDA--LIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
+ + PD+ T+N L++ CKLG V +A + W C PD+FTYT+ I G C+
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC--DPDYFTYTSFITGHCRR 203
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
++D A ++F +M NG + Y L+ LF+A K+ EA L KM + + +TY
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXX 438
+LI L +G+ A LF + + G D Y++++
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 439 RGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
G + +++T +L+ G K L K + E +LVP ++ +
Sbjct: 324 NGLMPNVITYNALIKGFCKKNVHKAMGLLSKML-EQNLVPDLITY 367
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 138/352 (39%), Gaps = 63/352 (17%)
Query: 63 LHFFNWCRSHHSS-------PLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQ 115
L ++CR+ L+P Y+ +L SL+R + +D V
Sbjct: 97 LFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIY 156
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFS 173
+FN L++ E Q + + L+Q GC P Y S + R + AF
Sbjct: 157 TFNTLVNGYCKLGYVVEAKQYVTW-----LIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 174 IFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKK 233
+F ++ + + + N +++ QL+ L +A E + K+ D
Sbjct: 212 VFKEMTQ----------------NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD- 254
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVW 293
N C P++ TY LI LC G+ +A+ ++
Sbjct: 255 ---------NCC----------------------PNVRTYTVLIDALCGSGQKSEAMNLF 283
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
+ ++ +PD YT LIQ C +D A+ + M NG P I YN+L+ K
Sbjct: 284 KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK 343
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
V +A L KM ++ + TYN LI G +G ++AY L +++ G
Sbjct: 344 -NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI NT ++ + G + A + +AG DP +TY S ++ ++ + A+ +
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM + C + +Y +I GL + + D A ++L ++ ++ Y LI+AL +
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G+ E F+QM SGI PD Y LI+ L +A L+ ML+ G PN +T
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 761 TTL 763
L
Sbjct: 334 NAL 336
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 571 RVQQKGSDSFDID------MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
R +KG DSF+I N LS G + +L+ E V P YT+N+++
Sbjct: 104 RTMRKG-DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
+ + K GY EA +T + + C D TY I G + D A + + + G +
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
Query: 685 LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKF 744
+ V Y LI L +A +IDE +MK P+V TY LI+ +G +A
Sbjct: 223 RNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 745 LKMMLDAGCTPNHVTDTTL 763
K M ++G P+ T L
Sbjct: 283 FKQMSESGIKPDDCMYTVL 301
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+ + Q G ++ +F AK K+ A L + P TY ++ +
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAK-KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G +EA + +M E D Y ++IQ D AS +L+ +L+ G +++
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVIT 332
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LI K + + +M + PD++TYNTLI +G L AY+ L +M
Sbjct: 333 YNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLME 391
Query: 750 DAGCTPNHVT 759
++G PN T
Sbjct: 392 ESGLVPNQRT 401
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
Q G D D +F++ + ++ A K+F+ T+ G +Y ++ +
Sbjct: 183 QAGCDP-DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+EA +++ +M + C ++ TY ++I L G+ A + ++ + G D MY L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
I + +DE + E M +G+ P+V+TYN LI+ K + K A L ML+
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNL 360
Query: 754 TPNHVTDTTL 763
P+ +T TL
Sbjct: 361 VPDLITYNTL 370
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
E+ KL P YN ++ L + G + + +L+ DI +NTL+N K G
Sbjct: 113 EIKYKLTPK---CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
+ E ++ + +G +PD TY + I H + + A+K K M GC N V+ T
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 762 TLDYLGREIDKLRYQKASILNEKDD 786
L Y E K+ + ++ KDD
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDD 254
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 28/309 (9%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAF 172
++ ++ +L + F E ++LD +++ GC P + YN L+ + R N++ A
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLD-----EMVRDGCKPNTVTYNRLIHSYGRANYLKEAM 414
Query: 173 SIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDK 232
++F ++ E + + + + L+ KA L+ ++ M +
Sbjct: 415 NVFNQMQE----------------AGCEPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQE 457
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKD 288
G + DT+ Y++ I+ G G L + LF +M G P+L T+N +I++ K +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
AL ++ D+ QPD TY+ +++ ++ A +F +M + P VY L+D
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
+ KA V +A Q ++ M Q G++ + T N L+ ++ R AY L + G
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Query: 409 DGITYSIIV 417
TY++++
Sbjct: 638 SLQTYTLLL 646
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
KL + G P + TYN ++ S+ + Y EA + +M E C D TY +I
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K G D+A + R+ + G D Y+ +IN LGKAG + ++ F +M G P++
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLG 767
VT+N +I +H+KA + A K + M +AG P+ VT ++ LG
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T + I G L +A +++ EAG+ P ++TY+ I++ K G+ A + EM +
Sbjct: 434 TLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
C ++ T+N++I K + A + + G D V Y+ ++ LG G ++E
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F +M+ PD Y L+++ KAG + A+++ + ML AG PN T +L
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ + + F E ++ EM C + TYN +I G+ A + ++
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + G D V Y TLI+ KAG +D +++M+ +G++PD TY+ +I KAG
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 738 LKDAYKFLKMMLDAGCTPNHVT 759
L A++ M+ GCTPN VT
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVT 501
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
NQ+L + L F F+ L + GF D Y + G L +M
Sbjct: 330 NQVLKQMDNYANALGF---FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMV 386
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P+ TYN LI + +K+A+ V+ + +PD TY TLI K +D
Sbjct: 387 RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A ++ +M G P T Y+ +++ L KA + A +LF +M +G + T+NI+I
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K E A L+ D++ G D +TYSI++
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
L A +F EAG +P TY +++ K G+ + A + M E D TY++
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
II LGK G A + ++ QG ++V +N +I KA + K + M+++G
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH-VTDTTLDYLGR--EIDK 772
PD VTY+ ++EV G L++A M P+ V +D G+ +DK
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 678 LLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
L +Q G+ D Y T++ LG+A + E+NK ++M G P+ VTYN LI + +A
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
LK+A M +AGC P+ VT TL
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTL 435
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N +++ A KL+ AG P TY+ +M G+ EA + EM
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQR 562
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D Y +++ GK G D A +L+ G ++ N+L++ + R+ E
Sbjct: 563 KNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
+ M + G++P + TY L+ + A
Sbjct: 623 AYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 215/541 (39%), Gaps = 35/541 (6%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGK---VKDALIVWE 294
++I + A+ G + +F +M P+L T N L+ L + + A V++
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN-GFRPGTIVYNSLLDVLFKA 353
D+ + T+ L+ G C K++ A + +M + P + YN++L + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
++S+ +L M + G+ + TYN L++G K G + A+ + +K+ D TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 414 SIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVRE 473
+I++ D+VT +L+ G + G +LM+ + E
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM-E 372
Query: 474 GDLVPK-------VLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL 526
D V L+W E + K K+ M D +++
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKR-EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 527 DSHDTKIEDEEGDEW------SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF 580
S ++ E G + +L+ +D L + K + L ++G F
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL------NSAHKRG---F 482
Query: 581 DIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
+D V T + F + K+ A ++++ + + P T+NS++ G A
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
E+ E D +T+N II G K GR + A + +K D N L+N L
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
K G ++ FF + D VTYNT+I K LK+AY L M + G P+
Sbjct: 603 KEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 759 T 759
T
Sbjct: 662 T 662
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 4/194 (2%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFE-IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
S ++ N ++ + +GKL A + E + +E V+P + TYN+I+ + KKG ++
Sbjct: 201 SLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL-DIVMYNTLINA 696
++ +M + + TYN ++ G K+G A I++ L+KQ L D+ YN LIN
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE-LMKQTNVLPDLCTYNILING 319
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
L AG + E + + MKS + PDVVTYNTLI+ + GL +A K ++ M + G N
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 757 HVT-DTTLDYLGRE 769
VT + +L +L +E
Sbjct: 380 QVTHNISLKWLCKE 393
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 197/510 (38%), Gaps = 51/510 (10%)
Query: 262 FHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK---T 318
H P P ++ +S GK AL +++ + +P+ T TL+ G + +
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS 182
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-GVKASCQT 377
+ I A +F+ M G +N L++ K+ +A + E+M E V T
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVT 242
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
YN ++ + K GR L D+KK G + +TY+ +V
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK 497
+ DL T L+ G+ G LM ++ L P V+ +
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN------------- 349
Query: 498 KKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKI-EDEEGDEWSLSPHMDKLANQVKS 556
+++ G + L K+ E E D ANQV
Sbjct: 350 ------------------TLIDGCFELGLSLEARKLMEQMENDGVK--------ANQVTH 383
Query: 557 SGYASQLFTPTPGQRVQQKGSD-------SFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
+ L + V +K + S DI +T + +L G LS A ++
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+ G+ + T N+I+ + K+ +EA ++ ++ D TY +I G + + +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + D + K + +N+LI L G+ + + F+++ SG+ PD T+N++I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ K G ++ A++F + P++ T
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 131/599 (21%), Positives = 227/599 (37%), Gaps = 89/599 (14%)
Query: 146 LQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIA 205
L P + +++ L A L +A IF K+I L N +
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRL----------------KLKPNLLT 168
Query: 206 FNQLLVALRKADMKLEF---QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
N LL+ L + ++VF ++ K G +L+ +N+ ++ + G L + +
Sbjct: 169 CNTLLIGLVRYPSSFSISSAREVFDDMV-KIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227
Query: 263 HQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M PD TYN ++ + K G++ D + D+ P+ TY L+ G CK
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287
Query: 318 TYKIDHATRIFNQMHN--------------NG---------------------FRPGTIV 342
+ A +I M NG +P +
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN+L+D F+ EA +L E+M +GVKA+ T+NI + L K + EA +L
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 403 KKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
F D +TY ++ +G ++ +T+ +++ + K +
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 462 DWTDRLMK----------HVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
D L+ V G L+ R + +E +++ KK + P+ F
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR-EEKVEKALEMWDEMKK--VKITPTVSTF 524
Query: 512 SEIMSILT--GSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPG 569
+ ++ L G + ++ D E E L P D N + GY +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFD------ELAESGLLPD-DSTFNSI-ILGYCKEGRVEKAF 576
Query: 570 QRVQQKGSDSFDID--MVNTFLSIFLAKGKLSLACKLFE-IFTEAGVDPVSYTYNSIMSS 626
+ + SF D N L+ +G A F + E VD V TYN+++S+
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV--TYNTMISA 634
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL 685
F K EA+ +++EM EK D TYN I L + G+ +L + + G +
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSM 693
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 174/447 (38%), Gaps = 62/447 (13%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
Y+ IL+++S+ +K++ +V + ++N L++ + E QI++ +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 141 QQRHLLQPGCTPLIYNSLL-----IASLRNNHIPLAFSIFLKL--------------IEL 181
+Q ++L CT YN L+ S+R + LKL EL
Sbjct: 302 KQTNVLPDLCT---YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 182 FXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWG 241
+ +N + N L L K + + + +L+D GF+ D
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCK--------------- 282
Y+ I A+ GDL+ + + +M + T N ++ LCK
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 283 ---------------LG-----KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
+G KV+ AL +W+++ P T+ +LI G C K +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A F+++ +G P +NS++ K +V +A + + + + K T NIL+
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
+GL K G E A F L ++ + VD +TY+ ++ +G
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMK 469
D T S + + + G+ TD L+K
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+ N+ + GK LA + F+ E+G+ P T+NSI+ + K+G +A+
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
E + D T N+++ GL K G + A + L+++ +D V YNT+I+A K
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKDK 639
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
++ E +M+ G+ PD TYN+ I + + G L + + LK
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N ++ G + +L + + P TYN+++ + G EA ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL-DIVMYNTLINALGK 699
+M A+ T+N+ ++ L K + + + + L+ G+ DIV Y+TLI A K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G + + +M GI + +T NT+++ K L +A+ L G + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 760 DTTL 763
TL
Sbjct: 489 YGTL 492
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 199/485 (41%), Gaps = 36/485 (7%)
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
AC PD F +L++ C + A + Q GF N+ + L ++
Sbjct: 143 ACGSSPDVFD--SLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEID 200
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+++++M G + T+N++I+ K + A ++F + K G + + +++++++
Sbjct: 201 RFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMI 260
Query: 418 --LQXXXXXXXXXXXXXXXXXXXRGFVV-DLVTITSLMVGIHKHGRWDWTDRLMKHVREG 474
FV + VT S++ G K GR D +R+ G
Sbjct: 261 DGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI-----RG 315
Query: 475 DLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKI- 533
D+V K+G++ + + + Y S + + N +++ +
Sbjct: 316 DMV------KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 534 -----EDEEG------DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI 582
D EG D S + +D+ + G + + +Q
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVE 429
Query: 583 DMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+V NT + F+ KL+ A ++ G+ + ++ +++ ++K+G A I
Sbjct: 430 DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M + +++ YN I+ GL K G A A A+++ + + DIV YNTL+N K
Sbjct: 490 DGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKT 545
Query: 701 GRIDEVNKFFEQMKSSGINPDV--VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
G ++E + +M+ V VT+N +I K G + A + LK M++ G P+ +
Sbjct: 546 GNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSI 605
Query: 759 TDTTL 763
T TL
Sbjct: 606 TYGTL 610
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 122/608 (20%), Positives = 235/608 (38%), Gaps = 57/608 (9%)
Query: 38 QHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAY--SLILRSLSRPAFX 95
Q LT P+I ++L P L F+NW ++ S + + S ++ L
Sbjct: 50 QFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHL---LVG 106
Query: 96 XXXXXXXXSIKQDAVVLHPQSFNPL--LHSLIISHNFHETLQILDYIQQRHLLQPGCTPL 153
SI + + + + +PL L LI S+ G +P
Sbjct: 107 SRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQ-----------------ACGSSPD 149
Query: 154 IYNSLLIASLRNNHIPLAFSIFLKL-IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVA 212
+++SL+ A +N A+ + + E F A N +
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVH-----------------ALNNFMGC 192
Query: 213 LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----P 268
L + F +V+ K MD G+ + +N+ I++F L + S+F++M P
Sbjct: 193 LLNVNEIDRFWKVY-KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWP 251
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ---PDHFTYTTLIQGCCKTYKIDHAT 325
++ ++N +I CK G ++ AL + + + P+ TY ++I G CK ++D A
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 326 RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
RI M +G Y +L+D +A EA +L ++M +G+ + YN +++ L
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 386 IKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDL 445
G E A ++ D+ K +D T +I+V + V D+
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Query: 446 VTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK--KDYSP 503
V +LM + + D+++ + L + + ++ +K ++ + Y
Sbjct: 432 VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Query: 504 MFPSKGDFSEIM--SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYAS 561
M + ++ SI+ G + + + E + L N+ +G
Sbjct: 492 MIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN--AMEIKDIVTYNTLLNESLKTGNVE 549
Query: 562 QLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
+ + +Q G S + N ++ G A ++ + E GV P S TY
Sbjct: 550 EA-DDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 622 SIMSSFVK 629
++++SF K
Sbjct: 609 TLITSFSK 616
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 202/524 (38%), Gaps = 54/524 (10%)
Query: 263 HQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNA-----CAHQPDHFTYTTLIQGCC- 316
+Q G ++ L+ + G + A V E A H ++F GC
Sbjct: 141 YQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNF------MGCLL 194
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
+ID +++ +M + G+ +N ++ K +K+ EA +F +M + GV +
Sbjct: 195 NVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKK-KGQFV--DGITYSIIVLQXXXXXXXXXXXXXX 433
++N++I G K G A L + G FV + +TY+ ++
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA-----GME 488
G + T +L+ + G D RL + LV + + + ME
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMD 548
I+ S +D + F++ + + ++ + +E E+
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV---------KEAVEFQRQISEK 425
Query: 549 KLANQV-------------KSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAK 595
KL + K A Q+ Q + S D T + +L +
Sbjct: 426 KLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGL------SLDAISFGTLIDGYLKE 479
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
GKL A ++++ + YNSI++ K+G A A++ M K DI TY
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTY 535
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGY--LDIVMYNTLINALGKAGRIDEVNKFFEQM 713
N ++ K G + A IL ++ KQ G + +V +N +IN L K G ++ + + M
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
G+ PD +TY TLI SK + + ++ G TP+
Sbjct: 596 VERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHE 639
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 572 VQQKGSDSFDIDM--VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
++Q ++ F + + +N F+ L ++ K+++ G T+N ++ SF K
Sbjct: 171 IEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL-LKQGGYL--D 686
+ EA ++ M + ++ ++NM+I G K G A +L ++ + G ++ +
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
V YN++IN KAGR+D + M SG++ + TY L++ + +AG +A +
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 747 MMLDAGCTPNHVTDTTLDY 765
M G N V ++ Y
Sbjct: 351 EMTSKGLVVNTVIYNSIVY 369
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 13/286 (4%)
Query: 214 RKADMKLEFQQVFHKLMDKKG-----FALDTWGYNICIHAFGCWGDLATSFSLFHQMP-- 266
R+ D LE VF K+ K+ D+ +N I G L + L +M
Sbjct: 343 RRVDEALE---VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 267 ---GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
P+ TYNCLI C+ GK++ A V + +P+ T T++ G C+ + ++
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A F M G + + Y +L+ + V +A +EKM + G + Y LI
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
GL + R A + LK+ G +D + Y++++ G
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
D +T +L+ KH ++ +R+M+ +RE L P V + A ++A
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 192/454 (42%), Gaps = 44/454 (9%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDL------NACAHQPDHFTYTTLIQGCCKTYKI 321
PD+ T LI+ LCK +V +AL V+E + + + D + TLI G CK ++
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 322 DHATRIFNQMH-NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A + +M P + YN L+D +A K+ A ++ +M ++ +K + T N
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
++ G+ ++ A F D++K+G + +TY ++ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
D +L+ G+ + R R+++ ++EG +L + +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI------------- 553
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+F K + ++ +LT D + E ++ D + + + S +
Sbjct: 554 --GLFCDKNNTEKVYEMLT----------DMEKEGKKPDSITYNTLI---------SFFG 592
Query: 561 SQLFTPTPGQRVQQKGSDSFD--IDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVS 617
+ + ++Q D D + + + + G+L A KLF ++ + V+P +
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
YN ++++F K G F +A ++ EM K+ ++ TYN + + L + + + ++D
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+++Q + + L+ L + + ++ KF +
Sbjct: 713 MVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 193/486 (39%), Gaps = 19/486 (3%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
IS LCK + A + DL + + L+ + I + +M
Sbjct: 265 FISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKM----AQEG--VKASCQTYNILIHGLIKNG 389
RP + L++ L K+ +V EA ++FEKM +G +KA +N LI GL K G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 390 RPEAAYTLFCDLKKKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
R + A L +K + + + +TY+ ++ ++VT+
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA--SIKNPPSKKKDYSPMFP 506
+++ G+ +H + + + + V+ + + A S+ N Y M
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 507 S--KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
+ D ++++G D HD E+ E S +D LA + + +
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRD-HDAIRVVEKLKEGGFS--LDLLAYNMLIGLFCDKNN 561
Query: 565 TPTPGQRV--QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
T + + +K D NT +S F ++ E E G+DP TY +
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 623 IMSSFVKKGYFNEAWAIITEMG--EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
++ ++ G +EA + +MG K+ P + YN++I K+G A ++ + +
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNP-NTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
+ ++ YN L L + + + + K ++M P+ +T L+E S + L
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Query: 741 AYKFLK 746
KF++
Sbjct: 741 LRKFMQ 746
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKK 630
++G S D+ N + +F K K++E+ T+ G P S TYN+++S F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTE---KVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLKQGGYLDIVM 689
F ++ +M E + TY +I +G D A + D L + V+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LINA K G + E+MK + P+V TYN L + ++ + K + M+
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 750 DAGCTPNHVT 759
+ C PN +T
Sbjct: 715 EQSCEPNQIT 724
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
+E EAG P + Y +++S + ++A ++ ++ E D+ YNM+I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
+ +L + K+G D + YNTLI+ GK + V + EQM+ G++P V T
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 725 YNTLIEVHSKAGLLKDAYKFLK-MMLDAGCTPNHV 758
Y +I+ + G L +A K K M L + PN V
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 595 KGKLSLACKLFEI---FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
KG+L K+ + F+ GV P S +SS K N AW I++++ + P +
Sbjct: 234 KGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLE 293
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+N ++ LG+ + ++ ++ + D+V LIN L K+ R+DE + FE
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 712 QMKSSG------INPDVVTYNTLIEVHSKAGLLKDAYKFL-KMMLDAGCTPNHVT 759
+M+ I D + +NTLI+ K G LK+A + L +M L+ C PN VT
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVT 408
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 114/303 (37%), Gaps = 32/303 (10%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIAS 162
IK D++ FN L+ L E ++L R L+ C P + YN L+
Sbjct: 366 IKADSI-----HFNTLIDGLCKVGRLKEAEELL----VRMKLEERCAPNAVTYNCLIDGY 416
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
R + A + ++ E N + N ++ + + L
Sbjct: 417 CRAGKLETAKEVVSRMKE----------------DEIKPNVVTVNTIVGGMCRHH-GLNM 459
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLIS 278
VF M+K+G + Y IHA ++ + + +M PD Y LIS
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
LC++ + DA+ V E L D Y LI C + + M G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+I YN+L+ K ++ E+M ++G+ + TY +I G + A LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 399 CDL 401
D+
Sbjct: 640 KDM 642
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMG-EKLCPADIATYNMIIQGLGKIGRADLASAIL 675
S +N+++ K G EA ++ M E+ C + TYN +I G + G+ + A ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
R+ + ++V NT++ + + ++ FF M+ G+ +VVTY TLI
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 736 GLLKDAYKFLKMMLDAGCTPN 756
++ A + + ML+AGC+P+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPD 510
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+V KL + GF+LD YN+ I F + + + M PD TYN LIS
Sbjct: 532 RVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH-NNGFRP 338
K + + E + P TY +I C ++D A ++F M ++ P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
T++YN L++ K +A L E+M + V+ + +TYN L L + + E L
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 399 CDLKKKGQFVDGITYSIIV 417
++ ++ + IT I++
Sbjct: 711 DEMVEQSCEPNQITMEILM 729
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
GY T + V + D ++ VNT + L++A F + GV
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
TY +++ + +A +M E C D Y +I GL ++ R A ++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 676 DRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
++L K+GG+ LD++ YN LI ++V + M+ G PD +TYNTLI K
Sbjct: 535 EKL-KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
+ + ++ M + G P T
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTT 618
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK------LCPADIATYNMIIQGLG 663
E + P T ++++ K +EA + +M K + AD +N +I GL
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 664 KIGRADLASAILDRL-LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K+GR A +L R+ L++ + V YN LI+ +AG+++ + +MK I P+V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
VT NT++ + L A F M G N VT TL
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSY 618
A ++F G+R D NT + G+L A +L + E P +
Sbjct: 348 ALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
TYN ++ + + G A +++ M E ++ T N I+ G+ + ++A +
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K+G ++V Y TLI+A +++ ++E+M +G +PD Y LI +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 739 KDAYKFLKMMLDAG 752
DA + ++ + + G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 223 QQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCL 276
++V+ L M+K+G D+ YN I FG D + + QM P + TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 277 ISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
I C +G++ +AL +++D+ + P+ Y LI K A + +M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
RP YN+L L + T+ +L ++M ++ + + T IL+ L
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + GKL A ++ E + P T N+I+ + N A +M +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ ++ TY +I + + A +++L+ G D +Y LI+ L + R +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
+ E++K G + D++ YN LI + + Y+ L M G P+ +T +T +
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 765 YLGREID 771
+ G+ D
Sbjct: 590 FFGKHKD 596
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++ E E G YN ++ F K + + ++T+M ++ D TYN +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK-SSGIN 719
GK + +++++ + G + Y +I+A G +DE K F+ M S +N
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
P+ V YN LI SK G A + M PN T L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 273 YNCLISVLCK---LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
+N L+S L + + ++ D ++ +++ +PD T LI CK+ ++D A +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKI---RPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 330 QMH------NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA-QEGVKASCQTYNILI 382
+M N + +I +N+L+D L K ++ EA +L +M +E + TYN LI
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G + G+ E A + +K+ + +T + IV
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 7/283 (2%)
Query: 214 RKADMKLE-FQQVFHKLMDKKG-FALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC 271
R+ D LE F+Q+ K D D+ +N I G L + L +M + C
Sbjct: 343 RRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC 402
Query: 272 -----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
TYNCLI C+ GK++ A V + +P+ T T++ G C+ + ++ A
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
F M G + + Y +L+ + V +A +EKM + G + Y LI GL
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+ R A + LK+ G +D + Y++++ G D +
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
T +L+ KH ++ +R+M+ +RE L P V + A ++A
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 191/454 (42%), Gaps = 44/454 (9%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDL------NACAHQPDHFTYTTLIQGCCKTYKI 321
PD+ T LI+ LCK +V +AL V+E + + + D + TLI G CK ++
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 322 DHATRIFNQMH-NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A + +M P + YN L+D +A K+ A ++ +M ++ +K + T N
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
++ G+ ++ A F D++K+G + +TY ++ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
D +L+ G+ + R R+++ ++EG +L + +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI------------- 553
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+F K + ++ +LT + +EG + P D + S +
Sbjct: 554 --GLFCDKNNAEKVYEMLTDME-------------KEGKK----P--DSITYNTLISFFG 592
Query: 561 SQLFTPTPGQRVQQKGSDSFD--IDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVS 617
+ + ++Q D D + + + + G+L A KLF ++ + V+P +
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
YN ++++F K G F +A ++ EM K+ ++ TYN + + L + + + ++D
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+++Q + + L+ L + + ++ KF +
Sbjct: 713 MVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 194/489 (39%), Gaps = 25/489 (5%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
IS LCK + A + DL + + L+ + I + +M
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKM----AQEG--VKASCQTYNILIHGLIKNG 389
RP + L++ L K+ +V EA ++FE+M +G +KA +N LI GL K G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 390 RPEAAYTLFCDLKKKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
R + A L +K + + V + +TY+ ++ ++VT+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA--SIKNPPSKKKDYSPMFP 506
+++ G+ +H + + + + V+ + + A S+ N Y M
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 507 S--KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK-----SSGY 559
+ D ++++G D HD E+ E S +D LA +
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRD-HDAIRVVEKLKEGGFS--LDLLAYNMLIGLFCDKNN 561
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
A +++ + K DS NT +S F ++ E E G+DP T
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSI---TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMG--EKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
Y +++ ++ G +EA + +MG K+ P + YN++I K+G A ++ +
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNP-NTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + ++ YN L L + + + + K ++M P+ +T L+E S +
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDE 737
Query: 738 LKDAYKFLK 746
L KF++
Sbjct: 738 LVKLRKFMQ 746
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKK 630
++G S D+ N + +F K A K++E+ T+ G P S TYN+++S F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLKQGGYLDIVM 689
F ++ +M E + TY +I +G D A + D L + V+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LINA K G + E+MK + P+V TYN L + ++ + K + M+
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 750 DAGCTPNHVT 759
+ C PN +T
Sbjct: 715 EQSCEPNQIT 724
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
+E EAG P + Y +++S + ++A ++ ++ E D+ YNM+I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
A+ +L + K+G D + YNTLI+ GK + V + EQM+ G++P V T
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 725 YNTLIEVHSKAGLLKDAYKFLK-MMLDAGCTPNHV 758
Y +I+ + G L +A K K M L + PN V
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
L F+ GV P S +SS K N AW I++++ + P + +N ++ LG
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 664 KIGRADLASAILDRLLKQGGYL---DIVMYNTLINALGKAGRIDEVNKFFEQMKSSG--- 717
+ D+ S + D +LK D+V LIN L K+ R+DE + FEQM+
Sbjct: 306 R--NMDI-SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDD 362
Query: 718 ---INPDVVTYNTLIEVHSKAGLLKDAYKFL-KMMLDAGCTPNHVT 759
I D + +NTLI+ K G LK+A + L +M L+ C PN VT
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT 408
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 114/303 (37%), Gaps = 32/303 (10%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIAS 162
IK D++ FN L+ L E ++L R L+ C P + YN L+
Sbjct: 366 IKADSI-----HFNTLIDGLCKVGRLKEAEELL----VRMKLEERCVPNAVTYNCLIDGY 416
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
R + A + ++ E N + N ++ + + L
Sbjct: 417 CRAGKLETAKEVVSRMKE----------------DEIKPNVVTVNTIVGGMCRHH-GLNM 459
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLIS 278
VF M+K+G + Y IHA ++ + + +M PD Y LIS
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
LC++ + DA+ V E L D Y LI C + + M G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+I YN+L+ K ++ E+M ++G+ + TY +I G + A LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 399 CDL 401
D+
Sbjct: 640 KDM 642
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMG-EKLCPADIATYNMIIQGLGKIGRADLASAIL 675
S +N+++ K G EA ++ M E+ C + TYN +I G + G+ + A ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
R+ + ++V NT++ + + ++ FF M+ G+ +VVTY TLI
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 736 GLLKDAYKFLKMMLDAGCTPN 756
++ A + + ML+AGC+P+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPD 510
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+V KL + GF+LD YN+ I F + + + M PD TYN LIS
Sbjct: 532 RVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH-NNGFRP 338
K + + E + P TY +I C ++D A ++F M ++ P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
T++YN L++ K +A L E+M + V+ + +TYN L L + + E L
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 399 CDLKKKGQFVDGITYSIIV 417
++ ++ + IT I++
Sbjct: 711 DEMVEQSCEPNQITMEILM 729
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
GY T + V + D ++ VNT + L++A F + GV
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
TY +++ + +A +M E C D Y +I GL ++ R A ++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 676 DRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
++L K+GG+ LD++ YN LI ++V + M+ G PD +TYNTLI K
Sbjct: 535 EKL-KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
+ + ++ M + G P T
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTT 618
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK------LCPADIATYNMIIQGLG 663
E + P T ++++ K +EA + +M K + AD +N +I GL
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 664 KIGRADLASAILDRL-LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K+GR A +L R+ L++ + V YN LI+ +AG+++ + +MK I P+V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
VT NT++ + L A F M G N VT TL
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 223 QQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCL 276
++V+ L M+K+G D+ YN I FG D + + QM P + TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 277 ISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
I C +G++ +AL +++D+ + P+ Y LI K A + +M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
RP YN+L L + T+ +L ++M ++ + + T IL+ L
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSY 618
A ++F G+R D NT + G+L A +L + E P +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
TYN ++ + + G A +++ M E ++ T N I+ G+ + ++A +
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K+G ++V Y TLI+A +++ ++E+M +G +PD Y LI +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 739 KDAYKFLKMMLDAG 752
DA + ++ + + G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + GKL A ++ E + P T N+I+ + N A +M +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ ++ TY +I + + A +++L+ G D +Y LI+ L + R +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
+ E++K G + D++ YN LI + + Y+ L M G P+ +T +T +
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 765 YLGREID 771
+ G+ D
Sbjct: 590 FFGKHKD 596
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++ E E G YN ++ F K + + ++T+M ++ D TYN +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK-SSGIN 719
GK + +++++ + G + Y +I+A G +DE K F+ M S +N
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
P+ V YN LI SK G A + M PN T L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 273 YNCLISVLCK---LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
+N L+S L + + ++ D ++ +++ +PD T LI CK+ ++D A +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKI---RPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 330 QMH------NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA-QEGVKASCQTYNILI 382
QM N + +I +N+L+D L K ++ EA +L +M +E + TYN LI
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G + G+ E A + +K+ + +T + IV
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L+ N + +A+N LL AL K+ ++F + M G D + + I IHA+ GD
Sbjct: 235 LERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE-MGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ +++ + +M P++ T+N +I LCK KV DA ++ +++ PD +TY +
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
++ C +++ AT++ ++M P YN +L +L + + A +++E M++
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 371 VKASCQTYNILIHGLI-KNGRPEAAYTLF 398
+ TY ++IHGL+ K G+ E A F
Sbjct: 414 FYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSL---ACKLFEIFTEAGVDPVSYTYNSIMSSFV 628
++ + + F+I F +F A + +L AC+ F E G+ P + ++ S
Sbjct: 126 IEAREYNYFEIS-SKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLC 184
Query: 629 KKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
K + N A + G + P+ TY+++++G +I A A + D +L++ +D+
Sbjct: 185 DKKHVNHAQEFFGKAKGFGIVPS-AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL 243
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ YN L++AL K+G +D K F++M + G+ PD ++ I + AG + AYK L
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 748 MLDAGCTPNHVT 759
M PN T
Sbjct: 304 MKRYDLVPNVYT 315
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLIS 278
++VF +++++ +D YN + A GD+ + +F +M PD ++ I
Sbjct: 228 RKVFDEMLERNC-VVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
C G V A V + + P+ +T+ +I+ CK K+D A + ++M G P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
T YNS++ +V+ A +L +M + TYN+++ LI+ GR + A ++
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 399 CDLKKKGQFVDGITYSIIV 417
+ ++ + TY++++
Sbjct: 407 EGMSERKFYPTVATYTVMI 425
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + K+ A L + + G +P ++TYNSIM+ N A +++ M
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL-GKAGRID 704
C D TYNM+++ L +IGR D A+ I + + ++ Y + Y +I+ L K G+++
Sbjct: 377 TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLE 436
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEV 731
E ++FE M GI P Y+T +E+
Sbjct: 437 EACRYFEMMIDEGIPP----YSTTVEM 459
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
F+ + G + A K+ + + P YT+N I+ + K ++A+ ++ EM +K
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
D TYN I+ + A+ +L R+ + D YN ++ L + GR D
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 708 KFFEQMKSSGINPDVVTYNTLIE-VHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +E M P V TY +I + K G L++A ++ +MM+D G P T
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
S A K+F+ E YN+++ + K G + + + EMG D ++ +
Sbjct: 225 SGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF 284
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
I G A +LDR+ + ++ +N +I L K ++D+ ++M G
Sbjct: 285 IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYLGR 768
NPD TYN+++ H + A K L M C P+ H + L L R
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%)
Query: 303 PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL 362
P TY+ L++G + A ++F++M + YN+LLD L K+ V ++
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 363 FEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
F++M G+K ++ I IH G +AY + +K+ + T++ I+
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 125/578 (21%), Positives = 244/578 (42%), Gaps = 63/578 (10%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
N LL L K+ E +Q+F K+ ++ F TW N I A+ L+ + LF P
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEF---TW--NTMIVAYSNSRRLSDAEKLFRSNP 86
Query: 267 GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
+ ++N LIS CK G +A ++ ++ + +P+ +T ++++ C + +
Sbjct: 87 VKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQ 146
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
I GF V N LL + + ++SEA LFE M EG K + T+ ++ G
Sbjct: 147 IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM--EGEKNNV-TWTSMLTGYS 203
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+NG A F DL+++G + T+ ++ GF + +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN-I 262
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFP 506
+ S ++ ++ R + R + EG V V+ W + + ++
Sbjct: 263 YVQSALIDMYAKCREMESARAL---LEGMEVDDVVSWNSMIVGCVR-------------- 305
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA---NQVKSSGYASQL 563
+G E +S+ + D KI D++++ ++ A ++K + A L
Sbjct: 306 -QGLIGEALSMF-----GRMHERDMKI-----DDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
T G ++ + + N + ++ +G + A K+FE E D +S+T ++
Sbjct: 355 IVKT--------GYATYKL-VNNALVDMYAKRGIMDSALKVFEGMIEK--DVISWT--AL 401
Query: 624 MSSFVKKGYFNEAWAIITEMG-EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ G ++EA + M + P I T + ++ ++ + + +K G
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRVGGITPDKIVTAS-VLSASAELTLLEFGQQVHGNYIKSG 460
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
+ + N+L+ K G +++ N F M+ D++T+ LI ++K GLL+DA
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----DLITWTCLIVGYAKNGLLEDAQ 516
Query: 743 KFLKMMLDA-GCTPN--HVTDTTLDYLGREIDKLRYQK 777
++ M G TP H +D GR D ++ ++
Sbjct: 517 RYFDSMRTVYGITPGPEHYA-CMIDLFGRSGDFVKVEQ 553
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + F G+ S A +L E ++P T+++++++FVK+ +EA I EM
Sbjct: 49 NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
Query: 646 -KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ P I TYN +I G K R D A +LD + +G D+V ++TLIN KA R+D
Sbjct: 109 WSIFPTTI-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ F +M GI + VTY TLI + G L A L M+ G P+++T
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
LF E G+ P TYN ++ SF G +++A ++ M EK DI T++ +I
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
K + A I +L+ + + YN++I+ K R+D+ + + M S G +PDVV
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
T++TLI + KA + + + M G N VT TTL
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 230 MDKKGFALDTWGYNICIHAF---GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGK 285
M +KG + YN I +F G W D + + PD+ T++ LI+ K K
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V +A +++++ + P TY ++I G CK ++D A R+ + M + G P + +++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ KA +V ++F +M + G+ A+ TY LIHG + G +AA L ++ G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 406 QFVDGITY 413
D IT+
Sbjct: 216 VAPDYITF 223
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ TYNC+I C G+ DA + + PD T++ LI K K+ A I
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+ +M P TI YNS++D K +V +A ++ + MA +G T++ LI+G K
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
R + +FC++ ++G + +TY+ ++
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI + ++ F+ + K+S A ++++ + P + TYNS++ F K+ ++A ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M K C D+ T++ +I G K R D I + ++G + V Y TLI+ +
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
G +D +M S G+ PD +T++ ++ L+ A+ L+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
+I+ K G A + TEM EK ++ TYN +I GR A +L ++++
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
DIV ++ LINA K ++ E + +++M I P +TYN++I+ K + DA
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 742 YKFLKMMLDAGCTPNHVTDTTL 763
+ L M GC+P+ VT +TL
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTL 156
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P TYN +I CK +V DA + + + + PD T++TLI G CK ++D+ I
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +MH G T+ Y +L+ + + A L +M GV T++ ++ GL
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 388 NGRPEAAYTLFCDLKK 403
A+ + DL+K
Sbjct: 233 KKELRKAFAILEDLQK 248
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
D+ ++ LCK G +A ++ +++ P+ TY +I C + + A ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M P + +++L++ K KVSEA +++++M + + + TYN +I G K
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
R + A + + KG D +T+S ++ RG V + VT
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
T+L+ G + G D L+ + + P + +
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
MG+ AD+ I+ L K G A + + ++G + +++ YN +I++ +GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ ++ M INPD+VT++ LI K + +A + K ML P +T
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 7/283 (2%)
Query: 214 RKADMKLE-FQQVFHKLMDKKG-FALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC 271
R+ D LE F+Q+ K D D+ +N I G L + L +M + C
Sbjct: 343 RRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC 402
Query: 272 -----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
TYNCLI C+ GK++ A V + +P+ T T++ G C+ + ++ A
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
F M G + + Y +L+ + V +A +EKM + G + Y LI GL
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+ R A + LK+ G +D + Y++++ G D +
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA 489
T +L+ KH ++ +R+M+ +RE L P V + A ++A
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 178/423 (42%), Gaps = 44/423 (10%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDL------NACAHQPDHFTYTTLIQGCCKTYKI 321
PD+ T LI+ LCK +V +AL V+E + + + D + TLI G CK ++
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 322 DHATRIFNQMH-NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A + +M P + YN L+D +A K+ A ++ +M ++ +K + T N
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
++ G+ ++ A F D++K+G + +TY ++ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
D +L+ G+ + R R+++ ++EG +L + +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI------------- 553
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+F K + ++ +LT + +EG + P D + S +
Sbjct: 554 --GLFCDKNNAEKVYEMLTDME-------------KEGKK----P--DSITYNTLISFFG 592
Query: 561 SQLFTPTPGQRVQQKGSDSFD--IDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVS 617
+ + ++Q D D + + + + G+L A KLF ++ + V+P +
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
YN ++++F K G F +A ++ EM K+ ++ TYN + + L + + + ++D
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 678 LLK 680
+++
Sbjct: 713 MVE 715
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
+E EAG P + Y +++S + ++A ++ ++ E D+ YNM+I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
A+ +L + K+G D + YNTLI+ GK + V + EQM+ G++P V T
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 725 YNTLIEVHSKAGLLKDAYKFLK-MMLDAGCTPNHV 758
Y +I+ + G L +A K K M L + PN V
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
L F+ GV P S +SS K N AW I++++ + P + +N ++ LG
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG------ 717
+ + ++ ++ + D+V LIN L K+ R+DE + FEQM+
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFL-KMMLDAGCTPNHVT 759
I D + +NTLI+ K G LK+A + L +M L+ C PN VT
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT 408
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 114/303 (37%), Gaps = 32/303 (10%)
Query: 105 IKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIAS 162
IK D++ FN L+ L E ++L R L+ C P + YN L+
Sbjct: 366 IKADSI-----HFNTLIDGLCKVGRLKEAEELL----VRMKLEERCVPNAVTYNCLIDGY 416
Query: 163 LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEF 222
R + A + ++ E N + N ++ + + L
Sbjct: 417 CRAGKLETAKEVVSRMKE----------------DEIKPNVVTVNTIVGGMCRHH-GLNM 459
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLIS 278
VF M+K+G + Y IHA ++ + + +M PD Y LIS
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
LC++ + DA+ V E L D Y LI C + + M G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+I YN+L+ K ++ E+M ++G+ + TY +I G + A LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 399 CDL 401
D+
Sbjct: 640 KDM 642
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMG-EKLCPADIATYNMIIQGLGKIGRADLASAIL 675
S +N+++ K G EA ++ M E+ C + TYN +I G + G+ + A ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
R+ + ++V NT++ + + ++ FF M+ G+ +VVTY TLI
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 736 GLLKDAYKFLKMMLDAGCTPN 756
++ A + + ML+AGC+P+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPD 510
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 6/183 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+V KL + GF+LD YN+ I F + + + M PD TYN LIS
Sbjct: 532 RVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH-NNGFRP 338
K + + E + P TY +I C ++D A ++F M ++ P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
T++YN L++ K +A L E+M + V+ + +TYN L L + + E L
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 399 CDL 401
++
Sbjct: 711 DEM 713
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 4/205 (1%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSF--DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
GY T + V + D ++ VNT + L++A F + GV
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 616 VSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
TY +++ + +A +M E C D Y +I GL ++ R A ++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 676 DRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
++L K+GG+ LD++ YN LI ++V + M+ G PD +TYNTLI K
Sbjct: 535 EKL-KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
+ + ++ M + G P T
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTT 618
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKK 630
++G S D+ N + +F K A K++E+ T+ G P S TYN+++S F K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAIL-DRLLKQGGYLDIVM 689
F ++ +M E + TY +I +G D A + D L + V+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
YN LINA K G + E+MK + P+V TYN L
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK------LCPADIATYNMIIQGLG 663
E + P T ++++ K +EA + +M K + AD +N +I GL
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 664 KIGRADLASAILDRL-LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K+GR A +L R+ L++ + V YN LI+ +AG+++ + +MK I P+V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
VT NT++ + L A F M G N VT TL
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSY 618
A ++F G+R D NT + G+L A +L + E P +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
TYN ++ + + G A +++ M E ++ T N I+ G+ + ++A +
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K+G ++V Y TLI+A +++ ++E+M +G +PD Y LI +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 739 KDAYKFLKMMLDAG 752
DA + ++ + + G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + GKL A ++ E + P T N+I+ + N A +M +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ ++ TY +I + + A +++L+ G D +Y LI+ L + R +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
+ E++K G + D++ YN LI + + Y+ L M G P+ +T +T +
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 765 YLGREID 771
+ G+ D
Sbjct: 590 FFGKHKD 596
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++ E E G YN ++ F K + + ++T+M ++ D TYN +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK-SSGIN 719
GK + +++++ + G + Y +I+A G +DE K F+ M S +N
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
P+ V YN LI SK G A + M PN T L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 273 YNCLISVLCK---LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
+N L+S L + + ++ D ++ +++ +PD T LI CK+ ++D A +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKI---RPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 330 QMH------NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA-QEGVKASCQTYNILI 382
QM N + +I +N+L+D L K ++ EA +L +M +E + TYN LI
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G + G+ E A + +K+ + +T + IV
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 223 QQVFHKL--MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCL 276
++V+ L M+K+G D+ YN I FG D + + QM P + TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 277 ISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
I C +G++ +AL +++D+ + P+ Y LI K A + +M
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
RP YN+L L + T+ +L ++M +
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/516 (21%), Positives = 207/516 (40%), Gaps = 51/516 (9%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
YN ++ +L K K + +W+++ +P + TY TLI K HA +M
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 249
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA------SCQTYNILIHGLI 386
G +P + +L + KA + +A + F+K + + KA S TYN +I
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
K+G+ + A F + ++G +T++ ++ G L
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMI-------------------HIYGNNGQLG 350
Query: 447 TITSLMVGIHKHGRWD---WTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSP 503
+TSLM + H D + + H + D+ +K + +K P +
Sbjct: 351 EVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLY 410
Query: 504 MFPSKGDFSEIMSILTGSQDANLDSHDTK--------IEDEEGDE-WSLSPHMDKLANQV 554
F + E ++ D N++ + +E E ++ WS +A +
Sbjct: 411 AFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF-HVAGNM 469
Query: 555 KSSGYASQLFTPTPGQR----------VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKL 604
S GY++ + G+R + + + + N + + AC+L
Sbjct: 470 SSEGYSANI--DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACEL 527
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
FE GV P TYN+++ ++ + +M E +D Y +I K
Sbjct: 528 FESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
+G+ ++A + +++ D+V+Y LINA G + + + E MK +GI + V
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 725 YNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
YN+LI++++K G L +A + +L + C D
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPD 682
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/587 (19%), Positives = 222/587 (37%), Gaps = 108/587 (18%)
Query: 196 DSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL 255
DS+ +S +N ++ K+ E + F +++++ G T +N IH +G G L
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE-GIVPTTVTFNTMIHIYGNNGQL 349
Query: 256 ATSFSLFHQMP---GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
SL M PD TYN LIS+ K ++ A ++++ +PD +Y TL+
Sbjct: 350 GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEK------M 366
+ ++ A + +M ++ ++L + +A + ++ F++ M
Sbjct: 410 YAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM 469
Query: 367 AQEGVKAS-------------------CQ--------TYNILIHGLIKNGRPEAAYTLFC 399
+ EG A+ CQ YN++I + E A LF
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFE 529
Query: 400 DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG 459
+ G D TY+ +V G+V D + +++ K G
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 460 RWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILT 519
+ + + + K + E ++ P V+ + + A F G+ + MS +
Sbjct: 590 QLNMAEEVYKEMVEYNIEPDVVVYGVLINA---------------FADTGNVQQAMSYVE 634
Query: 520 GSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDS 579
++A + PG V
Sbjct: 635 AMKEAGI-----------------------------------------PGNSV------- 646
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVD---PVSYTYNSIMSSFVKKGYFNEA 636
+ N+ + ++ G L A ++ ++ P YT N +++ + ++ +A
Sbjct: 647 ----IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
AI M ++ A+ T+ M++ K GR + A+ I ++ + D + YN+++
Sbjct: 703 EAIFDSMKQR-GEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK 743
GR E + F++M SSGI PD T+ +L + K G+ K A +
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVR 808
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + ++ F G + A E EAG+ S YNS++ + K GY +EA AI
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 641 TEMGE---KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
++ + K D+ T N +I + A AI D + KQ G + + ++
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMY 727
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
K GR +E + +QM+ I D ++YN+++ + + G K+A + K M+ +G P+
Sbjct: 728 KKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD- 786
Query: 758 VTDTTLDYLGREIDKLRYQKASI 780
D+T LG + KL K ++
Sbjct: 787 --DSTFKSLGTILMKLGMSKKAV 807
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 14/276 (5%)
Query: 520 GSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ---QKG 576
G A L++ D+ IED E +LSP ++L+N+ ++ Q+ + + KG
Sbjct: 126 GCIPAILEALDS-IEDVED---ALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSKG 181
Query: 577 SDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA 636
++ N L I K L++ G+ P++ TY +++ + K G A
Sbjct: 182 CYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHA 241
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI------VMY 690
+ +M + D T +++Q K A + D Y
Sbjct: 242 LCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTY 301
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
NT+I+ GK+G+I E ++ F++M GI P VT+NT+I ++ G L + +K M
Sbjct: 302 NTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-K 360
Query: 751 AGCTPNHVTDTTLDYLGREIDKLRYQKASILNEKDD 786
C P+ T L L + + + A KDD
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD 396
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
SYTYN+++ ++ K G EA M E+ T+N +I G G+ ++++
Sbjct: 298 SYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM- 356
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ +K D YN LI+ K I+ +F++MK G+ PD V+Y TL+ S
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
++++A + M D + T + L + E + L
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
NT + + G++ A + F+ E G+ P + T+N+++ + G E +++ M
Sbjct: 302 NTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-- 359
Query: 646 KL-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
KL C D TYN++I K + A A + G D V Y TL+ A ++
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLD 764
E +M + D T + L ++ +A +L+ ++ + K AG + +D
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 765 YLGR 768
G
Sbjct: 480 AYGE 483
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 10/189 (5%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISV 279
++F K + L+ YNI + G SL+ +M P TY LI V
Sbjct: 172 EIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDV 231
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
K G AL ++ QPD T ++Q K + A F + + +
Sbjct: 232 YSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKAD 291
Query: 340 TIV------YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
+ V YN+++D K+ ++ EA + F++M +EG+ + T+N +IH NG+
Sbjct: 292 SHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGE 351
Query: 394 AYTLFCDLK 402
+L +K
Sbjct: 352 VTSLMKTMK 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ T NC+I++ + V+ A +++ + + + FT+ ++ K + + AT+I
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
QM + YNS+L + + EA + F++M G++ T+ L L+K
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 388 NGRPEAAYTLFCDLKKK 404
G + A +++KK
Sbjct: 800 LGMSKKAVRKIEEIRKK 816
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N+ ++ +G L + + G++ + TYN+++ S Y++E I+
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 641 TEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILD---RLLKQGGYLDIVMYNTLINA 696
M + CP + TYN++I GL K A L S +D ++L+Q DIV YNT++ A
Sbjct: 338 NIMYQTSYCPT-VITYNILINGLCK---ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ K G +D+ + +K++ P ++TYN++I+ +K GL+K A + MLDAG P+
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 757 HVTDTTLDY 765
+T +L Y
Sbjct: 454 DITRRSLIY 462
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ NT + G A + ++ + G P TY ++ + A ++
Sbjct: 208 DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVL 267
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + C DI TYN ++ + G + ++++ +L G L+ V YNTL+++L
Sbjct: 268 EDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSH 327
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT- 759
DEV + M + P V+TYN LI KA LL A F ML+ C P+ VT
Sbjct: 328 EYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Query: 760 DTTLDYLGRE 769
+T L + +E
Sbjct: 388 NTVLGAMSKE 397
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 179/467 (38%), Gaps = 42/467 (8%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+ D T ++ C K+ A ++ M + P ++L+ L + ++ +A
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
+ M G TYN++I L K G A L D+ G D ITY+ ++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH-GRWDWTDRLMKHVREGDLVPKV 480
G ++T T L+ + ++ G + L EG P +
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG-CYPDI 279
Query: 481 LRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMS----ILTGSQDANLDSHDTKIEDE 536
+ + + + + + +G+ E+ S IL+ + N +++T +
Sbjct: 280 VTYNSLVNYNCR---------------RGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 537 EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKG 596
E+ ++++ N + + Y + T N ++
Sbjct: 325 CSHEYW--DEVEEILNIMYQTSYCPTVIT-------------------YNILINGLCKAR 363
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
LS A F E P TYN+++ + K+G ++A ++ + CP + TYN
Sbjct: 364 LLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+I GL K G A + ++L G + D + +LI +A ++E + ++ +
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G TY +I+ K ++ A + +++ML GC P+ T +
Sbjct: 484 GNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A ++ E G P TYNS+++ ++G E ++I + + TYN ++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
L D IL+ + + ++ YN LIN L KA + FF QM P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGRE 769
D+VTYNT++ SK G++ DA + L ++ + C P +T ++ +D L ++
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKK 432
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 23/275 (8%)
Query: 149 GCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAF 206
GC P I YNSL+ + R ++ S+ + L N++ +
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI----------------LSHGLELNTVTY 317
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
N LL +L + E +++ + +M + + YNI I+ L+ + F+QM
Sbjct: 318 NTLLHSLCSHEYWDEVEEILN-IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 267 G----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
PD+ TYN ++ + K G V DA+ + L P TY ++I G K +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A +++QM + G P I SL+ +A V EA Q+ ++ + G TY ++I
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
GL K E A + + G D Y+ IV
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD TYN +I LCK G ++ AL++ ED++ PD TY T+I+ + A R
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+ NG P I Y L++++ + + A ++ E MA EG TYN L++ +
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G E ++ + G ++ +TY+ ++
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 168/441 (38%), Gaps = 51/441 (11%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
+ L+ L + D +L+ ++M G DT YN+ I G + T+ L M
Sbjct: 143 SNLVRGLARID-QLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 267 ----GPDLCTYNCLISVLCKLGKVKDALIVWED--LNACAHQPDHFTYTTLIQGCCKTYK 320
PD+ TYN +I + G + A+ W+D N C P TYT L++ C+
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP--PFMITYTVLVELVCRYCG 259
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A + M G P + YNSL++ + + E + + + G++ + TYN
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+H L + + + + + ITY+I++ +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK-- 498
+ D+VT +++ + K G D L+ ++ P ++ + + ++ K KK
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 499 KDYSPMFPSKGDFSEIM---SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVK 555
+ Y M + G F + + S++ G ANL ++ E + N ++
Sbjct: 440 ELYHQMLDA-GIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR----------GNGIR 488
Query: 556 SSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDP 615
S Y R+ +G K ++ +A ++ EI G P
Sbjct: 489 GSTY-----------RLVIQG---------------LCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 616 VSYTYNSIMSSFVKKGYFNEA 636
Y +I+ + G +EA
Sbjct: 523 DETIYTAIVKGVEEMGMGSEA 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 9/197 (4%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
I +N L+ L KA + F++++++K D YN + A G + + L
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLP-DIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+ P L TYN +I L K G +K AL ++ + PD T +LI G C+
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 320 KIDHATRIFNQMHN--NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
++ A ++ + N NG R T Y ++ L K ++ A ++ E M G K
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGST--YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETI 526
Query: 378 YNILIHGLIKNGRPEAA 394
Y ++ G+ + G A
Sbjct: 527 YTAIVKGVEEMGMGSEA 543
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 2/201 (0%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHF-TYTTLIQGCCKTYKIDHATRIFNQ 330
T N ++ LC GK+ DA + E + A +Q HF + + L++G + ++D A I
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVM-ARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M +G P TI YN ++ L K + A L E M+ G TYN +I + G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 391 PEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
E A + D + G ITY+++V G D+VT S
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 451 LMVGIHKHGRWDWTDRLMKHV 471
L+ + G + +++H+
Sbjct: 285 LVNYNCRRGNLEEVASVIQHI 305
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 196 DSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL 255
D + N + ++ L+ L K+ + ++ H+ MD K + ++ I A+ G L
Sbjct: 76 DRGISPNVVTYSSLITGLCKSGRLADAERRLHE-MDSKKINPNVITFSALIDAYAKRGKL 134
Query: 256 ATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
+ S++ M P++ TY+ LI LC +V +A+ + + + + P+ TY+TL
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
G K+ ++D ++ + M G T+ N+L+ F+A K+ A +F M G+
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
+ ++YNI++ GL NG E A + F ++K +D ITY+I++
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYD 314
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL----MKHVREGDLVP 478
+ D T ++ +++ G D L KHVR+ + P
Sbjct: 315 LFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAP 365
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ LI LCK V AL V + + P+ TY++LI G CK+ ++ A R
Sbjct: 47 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 106
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
++M + P I +++L+D K K+S+ +++ M Q + + TY+ LI+GL +
Sbjct: 107 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
R + A + + KG + +TYS + RG + V+
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 226
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
+L+ G + G+ D + ++ L+P + +
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL-ACKLFEIF 608
L+N +K + Y + GQ +K D+ +V+T L L K +L + A ++ +
Sbjct: 25 LSNSIKDAVYVA-------GQ--MEKMGIKRDV-VVDTILIDTLCKNRLVVPALEVLKRM 74
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
+ G+ P TY+S+++ K G +A + EM K ++ T++ +I K G+
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
++ +++ ++ Y++LI L R+DE K + M S G P+VVTY+TL
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K+ + D K L M G N V+ TL
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G++P T +S+++ F +A + +M + D+ ++I L K A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+L R+ +G ++V Y++LI L K+GR+ + + +M S INP+V+T++ LI+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
++K G L KMM+ PN T ++L Y
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIY 161
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ + + +GKLS ++++ + +DP +TY+S++ +EA ++ M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K C ++ TY+ + G K R D +LD + ++G + V NTLI +AG+ID
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 706 VNKFFEQMKSSGINPDVVTYNTLI 729
F M S+G+ P++ +YN ++
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVL 265
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+R++ +G S ++ ++ ++ G+L+ A + ++P T+++++ ++ K
Sbjct: 72 KRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
+G ++ ++ M + ++ TY+ +I GL R D A +LD ++ +G ++V
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
Y+TL N K+ R+D+ K + M G+ + V+ NTLI+ + +AG + A M
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 750 DAGCTPN 756
G PN
Sbjct: 251 SNGLIPN 257
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 155/381 (40%), Gaps = 40/381 (10%)
Query: 365 KMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXX 424
KM + G++ T + L++G + + A + ++K G D + +I++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 425 XXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWK 484
RG ++VT +SL+ G+ K GR +R + + + P V+ +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 485 AGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSI----LTGSQDANLDSHDTKIEDEEGDE 540
A ++A + +G S++ S+ + S D N+ ++ + I
Sbjct: 123 ALIDA---------------YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI------- 160
Query: 541 WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSL 600
+ L H N+V + L KG ++ +T + F ++
Sbjct: 161 YGLCMH-----NRVDEAIKMLDLMI--------SKGCTP-NVVTYSTLANGFFKSSRVDD 206
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
KL + + GV + + N+++ + + G + A + M +I +YN+++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GL G + A + + + K LDI+ Y +I+ + KA + E F ++K + P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 721 DVVTYNTLIEVHSKAGLLKDA 741
D Y +I ++AG+ +A
Sbjct: 327 DFKAYTIMIAELNRAGMRTEA 347
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 72/142 (50%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A K+ ++ G P TY+++ + F K ++ ++ +M ++ A+ + N +I+
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
G + G+ DLA + + G +I YN ++ L G +++ FE M+ + +
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 721 DVVTYNTLIEVHSKAGLLKDAY 742
D++TY +I KA ++K+AY
Sbjct: 292 DIITYTIMIHGMCKACMVKEAY 313
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+PD T ++L+ G C + I A + QM G + +V L+D L K V A +
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
+ ++M G+ + TY+ LI GL K+GR A ++ K + IT+S ++
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVL 481
++ T +SL+ G+ H R D +++ + P V+
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 482 RW 483
+
Sbjct: 190 TY 191
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ T + L++ C +KDA+ V + + D T LI CK + A +
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M + G P + Y+SL+ L K+ ++++A + +M + + + T++ LI K
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G+ +++ + + + TYS ++ +G ++VT
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 448 ITSLMVGIHKHGRWDWTDRLM 468
++L G K R D +L+
Sbjct: 191 YSTLANGFFKSSRVDDGIKLL 211
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDA 289
GF D + YN + F + + ++ +M PD TYN LI L K G+V++A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
+ + + ++PD TYT+L+ G C+ + A + +M G P YN+LL
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
L KA + + +L+E M GVK Y L+ L+K+G+ AY +F D
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSD 439
Query: 410 GITYSII 416
YS +
Sbjct: 440 ASAYSTL 446
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDALIV 292
DT+ YN + DL + +M PDL ++ LI +C +++A+ +
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYL 252
Query: 293 WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
L +PD F Y T+++G C K A ++ +M G P I YN+L+ L K
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
A +V EA + M G + TY L++G+ + G A +L +++ +G + T
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372
Query: 413 YSIIV 417
Y+ ++
Sbjct: 373 YNTLL 377
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 572 VQQKGSDSFDID--MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
V + G+ F D + NT + F K S A +++ E GV+P TYN+++ K
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G EA + M + D ATY ++ G+ + G + A ++L+ + +G +
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YNTL++ L KA +D+ + +E MKSSG+ + Y TL+ K+G + +AY+ +
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Query: 750 DAGCTPNHVTDTTLDYLGREIDKLRYQ 776
D+ + +TL+ + + K + Q
Sbjct: 433 DSKSLSDASAYSTLETTLKWLKKAKEQ 459
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 577 SDSFDIDMVNTFLSI--FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
++ + D V T +++ G++ A L + TE P +YTYN ++ K +
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 635 EAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+ + EM + D+ ++ ++I + A ++ +L G D +YNT+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
+ + E +++MK G+ PD +TYNTLI SKAG +++A +LK M+DAG
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 754 TPNHVTDTTL 763
P+ T T+L
Sbjct: 332 EPDTATYTSL 341
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD YN ++ C L K +A+ V++ + +PD TY TLI G K +++ A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M + G+ P T Y SL++ + + + A L E+M G + TYN L+HGL K
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ L+ +K G ++ Y+ +V
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
E+ + V P ++ ++ + EA +++++G D YN I++G +
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
+ A + ++ ++G D + YNTLI L KAGR++E + + M +G PD TY
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+L+ + G A L+ M GC PN T TL
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD T + + LC+ G+V +A + ++L PD +TY L++ CK +
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 328 FNQMHNN-GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
++M ++ +P + + L+D + + + EA L K+ G K C YN ++ G
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+ A ++ +K++G D ITY+ ++ G+ D
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 447 TITSLMVGIHKHG 459
T TSLM G+ + G
Sbjct: 337 TYTSLMNGMCRKG 349
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
SF L+ ++ S N E + ++ + +P C +YN+++ + A ++
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGF-KPDC--FLYNTIMKGFCTLSKGSEAVGVY 288
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
K+ E + I +N L+ L KA ++E +++ K M G+
Sbjct: 289 KKMKE----------------EGVEPDQITYNTLIFGLSKAG-RVEEARMYLKTMVDAGY 331
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALI 291
DT Y ++ G+ + SL +M P+ CTYN L+ LCK + +
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
++E + + + + Y TL++ K+ K+ A +F+
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+++ + G+ P +YT+N + + F F E + +M E+ D+ TYN ++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
+ GR A + + ++ D+V Y +LI L K GR+ E ++ F +M GI PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++YNTLI + K G+++ + K L ML P+ T
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 8/289 (2%)
Query: 120 LLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLK-L 178
LLH L+ S F +Q L + L ++ L+ A+ N P+ F + +K
Sbjct: 119 LLHILVSSKKFPLAMQFL--CELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGY 176
Query: 179 IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALD 238
++L LDS + + + N LL L K D+ + QV+ +M + G +
Sbjct: 177 LKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY-SVMCRVGIHPN 235
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWE 294
T+ +NI + F + +M PDL TYN L+S C+ G++K+A +++
Sbjct: 236 TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 295
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
+ PD TYT+LI+G CK ++ A + F++M + G +P + YN+L+ K
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 355
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
+ ++ +L +M V T +++ G ++ GR +A +L++
Sbjct: 356 MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 7/269 (2%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSN--SIAFNQLLVA 212
Y LL + + PLA +LIEL + + N + F+ L+
Sbjct: 116 YCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKG 175
Query: 213 LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----P 268
K + E +VF +++D GF++ N ++ + + ++ M P
Sbjct: 176 YLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHP 234
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+ T+N L +V C ++ E + +PD TY TL+ C+ ++ A ++
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
M+ P + Y SL+ L K +V EA Q F +M G+K C +YN LI+ K
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G + + L ++ D T +IV
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIV 383
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++F E E G +P TYN+++SS+ ++G EA+ + M
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ D+ TY +I+GL K GR A R++ +G D + YNTLI A K G + +
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
K +M + + PD T ++E + G L A F+
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 7/264 (2%)
Query: 222 FQQV--FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNC 275
F++V F + M+++GF D YN + ++ G L +F L+ M PDL TY
Sbjct: 252 FREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTS 311
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
LI LCK G+V++A + + +PD +Y TLI CK + + ++ ++M N
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
P +++ + ++ A ++ + V + + LI L + G+P AA
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 396 TLFCD-LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
L ++++G TY+ ++ + V+D T +L+
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 455 IHKHGRWDWTDRLMKHVREGDLVP 478
+ + GR + LM + + ++ P
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKP 515
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E DPV ++ ++ ++K G E + + E+ + + T N ++ GL K+ +
Sbjct: 161 ECNWDPV--VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
+ + + G + + +N L N EV+ F E+M+ G PD+VTYNTL+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ + G LK+A+ K+M P+ VT T+L
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 593 LAKG--KLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
L KG KL L + F +F E +G T N +++ +K + W + + M
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVG 231
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
+ T+N++ L+++ ++G D+V YNTL+++ + GR+ E
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
++ M + PD+VTY +LI+ K G +++A++ M+D G P+ ++ TL Y
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIY 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
NT + + +G + + KL V P +T I+ FV++G A + E+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY-LDIVMYNTLINALGKAGRID 704
+ +I L + G+ A +LDR++++ G+ YN LI +L + I+
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLD 764
E ++K+ D TY LI + G ++A + M D+ P+ L
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
Query: 765 Y 765
Y
Sbjct: 525 Y 525
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 121 LHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIE 180
L+ LI S + + ++L Y + LQP I+N L+ +N I AF + ++
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQP--NTCIFNILVKHHCKNGDINFAFLVVEEM-- 222
Query: 181 LFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTW 240
S NSI ++ L+ L E ++F ++ K+G + D
Sbjct: 223 -------------KRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDL 296
+N+ I+ F G++ + + M P++ Y+ L++ CK+GK+++A ++++
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+ D YTTL+ C+ + D A ++ +M + R T+ YN +L L +
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
EA Q+ ++ EGV + +Y I+++ L NG E A + ++G + T++ +
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 417 VLQ 419
V++
Sbjct: 450 VVR 452
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F GK+ A + F+ + G+ + Y ++M+ F + G +EA ++ EM C AD
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TYN+I++GL GR++ A +LD+ +G +L+ Y ++NAL G +++ KF
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
M GI P T+N L+ ++G + + L L G P
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFE-IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+T + A + A +LFE + ++ G+ P T+N +++ F + G A I+ M
Sbjct: 236 STLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMK 295
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ C ++ Y+ ++ G K+G+ A D + K G LD V Y TL+N + G D
Sbjct: 296 KNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD 355
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
E K +MK+S D +TYN ++ S G ++A + L
Sbjct: 356 EAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 596 GKLSLACKLFEIFTEAGVD-PVSYTYNSIMSSFVKKGYFNEAWAIITEM--GEKLCPADI 652
G ++ A + E +G+ P S TY+++M EA + +M E + P D
Sbjct: 210 GDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP-DP 268
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
T+N++I G + G + A ILD + K G ++ Y+ L+N K G+I E + F++
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+K +G+ D V Y TL+ + G +A K L M + C + +T
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++ F G++ A K+ + + G +P Y Y+++M+ F K G EA E+ +
Sbjct: 272 NVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKK 331
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D Y ++ + G D A +L + D + YN ++ L GR +E
Sbjct: 332 TGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +Q S G++ + +Y ++ G L+ A KFL +M + G P+H T
Sbjct: 392 ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR-PGTIVYNSLLDVLFKATKVSEAC 360
QP+ + L++ CK I+ A + +M +G P +I Y++L+D LF ++ EA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 361 QLFEKM-AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQ 419
+LFE M ++EG+ T+N++I+G + G E A + +KK G + YS ++
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 420 XXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
G +D V T+LM ++G D +L+ ++
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTE--AGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
++ ++T L++ + G+++L+ KL ++ + G+ P + +N ++ K G N A+ +
Sbjct: 160 LNAISTCLNLLIDSGEVNLSRKLL-LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLV 218
Query: 640 ITEMGEK-LCPADIATYNMIIQGLGKIGRADLASAILDRLL-KQGGYLDIVMYNTLINAL 697
+ EM + + TY+ ++ L R+ A + + ++ K+G D V +N +IN
Sbjct: 219 VEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGF 278
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
+AG ++ K + MK +G NP+V Y+ L+ K G +++A + + G +
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 758 VTDTTL 763
V TTL
Sbjct: 339 VGYTTL 344
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/540 (19%), Positives = 217/540 (40%), Gaps = 47/540 (8%)
Query: 243 NICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWED-LNACAH 301
N + F +G+L ++ +F +M +L ++N L+ K G +A+ ++ L
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+PD +T+ +++ C + + + G+ V N+L+ + K V A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
LF++M + + ++N +I G +NG LF ++ D +T + ++
Sbjct: 253 LFDRMPRRDI----ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVL 481
GF VD+ SL G W ++L + D+V
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS--- 365
Query: 482 RWKAGMEASIKN-PPSKKKDYSPMFPS---KGDFSEIMSILT-----GSQDANLDSHDTK 532
W + N P K D M K D + ++L+ G D ++ H
Sbjct: 366 -WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 533 IEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS-- 590
I+ ++ ++ + ++ K A +F P + V S + + N
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 591 IFLAKGKLSLA--------------------C--KLFEIFTEAGVDPVSYTYNSIMSSFV 628
IFL + K++L C ++ GV + N+++ +V
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 629 KKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
+ G N AW+ + D+ ++N+++ G + G+ + + DR++K D +
Sbjct: 545 RCGRMNTAWSQFNSQKK-----DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ +L+ K+ + + +F +M+ G+ P++ Y ++++ +AG L++A+KF++ M
Sbjct: 600 TFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 570 QRVQQKGS----------DSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
+R Q++GS S +++ N FL++F+ G L A +F +E + ++
Sbjct: 107 KRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNL----FS 162
Query: 620 YNSIMSSFVKKGYFNEAWAIITEM----GEKLCPADIATYNMIIQGLGKIGRADLASAIL 675
+N ++ + K+GYF+EA + M G K D+ T+ +++ G I +
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK---PDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 676 DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
+++ G LDI + N LI K G + F++M D++++N +I + +
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR----DIISWNAMISGYFEN 275
Query: 736 GLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G+ + + M P+ +T T++
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 8/180 (4%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
DID+VN +++++ G + A LF+ + ++N+++S + + G +E +
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI----ISWNAMISGYFENGMCHEGLEL 284
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
M D+ T +I +G L I ++ G +DI + N+L
Sbjct: 285 FFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLN 344
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
AG E K F +M+ D+V++ T+I + L A +MM P+ +T
Sbjct: 345 AGSWREAEKLFSRME----RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKV 286
H + + G LD + N + + G + T++S F+ D+ ++N L++ + G+
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQG 579
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
+ +++ + +PD T+ +L+ GC K+ + F++M + G P Y +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 347 LDVLFKATKVSEACQLFEKM 366
+D+L +A ++ EA + +KM
Sbjct: 640 VDLLGRAGELQEAHKFIQKM 659
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALI 291
+ G+ LD N I + GD+ ++ LF +MP D+ ++N +IS + G + L
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH----NNGFRPGTIVYNSLL 347
++ + + PD T T++I C ++ R+ +H GF V NSL
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISAC----ELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
+ A EA +LF +M ++ + ++ +I G N P+ A + + +
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDI----VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 408 VDGITYSIIV 417
D IT + ++
Sbjct: 396 PDEITVAAVL 405
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + FL K ACK+F+ E V P TYNS++ + +A +++ +M +
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K + T+ ++++GL G + A ++ + +G +V Y L++ LGK GRIDE
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+MK I PDVV YN L+ + +AY+ L M GC PN T
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 24/306 (7%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
S++ L++ L S NF QIL ++ R++ C ++ L+ + + A +F
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVR---CRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
K+ + D S+ L+ + + +LE + F
Sbjct: 140 HKI--------------TSFDCVRTIQSL---NTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALI 291
++ +NI I F D + +F +M P + TYN LI LC+ + A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
+ ED+ +P+ T+ L++G C + + A ++ M G +PG + Y L+ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
K ++ EA L +M + +K YNIL++ L R AY + +++ KG +
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 412 TYSIIV 417
TY +++
Sbjct: 363 TYRMMI 368
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ + + A L E + + P + T+ +M KG +NEA ++ +M
Sbjct: 225 NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEY 284
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ C + Y +++ LGK GR D A +L + K+ D+V+YN L+N L R+ E
Sbjct: 285 RGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPE 344
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +M+ G P+ TY +I+ + L ML + P T
Sbjct: 345 AYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPAT 398
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 25/279 (8%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
SFN L+ + ++ ++ D + + + QP + + YNSL+ RN+ + A S+
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEV-QP--SVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
+I+ N++ F L+ L E +++ M+ +G
Sbjct: 245 EDMIK----------------KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD-MEYRGC 287
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALI 291
Y I + G G + + L +M PD+ YN L++ LC +V +A
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
V ++ +P+ TY +I G C+ D + N M + P + ++ L
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGL-IKNG 389
K + AC + E M ++ + + L+ L IK+G
Sbjct: 408 KGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A LF + E G +Y+S++ K F+ I+ + + + + +IQ
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GK G D A + ++ I NTLIN L G +++ FF+ K + P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGREID 771
+ V++N LI+ + A K ML+ P+ VT ++ + +L R D
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
A+NQ++ L KA+ KLE K + G +DT YN + F G +F ++
Sbjct: 245 AYNQVIQYLAKAE-KLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 265 MPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M D TY +I L K G++ A +++ + +P +++L+ K +
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+D + +++ +M G RP ++ SL+D KA K+ A +L+++M + G + + Y +
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+I K+G+ E A T+F D++K G TYS ++
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLL 460
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIF-----TEAGVDPVSYTYNSIM 624
++ Q+ G D N + +FL KG L K FEI+ T++ +D TY I+
Sbjct: 267 KKAQESGCK-IDTQTYNNLMMLFLNKG---LPYKAFEIYESMEKTDSLLD--GSTYELII 320
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
S K G + A+ + +M E+ + ++ ++ +GK GR D + + + G
Sbjct: 321 PSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR 380
Query: 685 LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKF 744
M+ +LI++ KAG++D + +++MK SG P+ Y +IE H+K+G L+ A
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 745 LKMMLDAGCTPNHVTDTTL 763
K M AG P T + L
Sbjct: 441 FKDMEKAGFLPTPSTYSCL 459
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 592 FLAKG-KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
+LAK KL +A F+ E+G + TYN++M F+ KG +A+ I M +
Sbjct: 252 YLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL 311
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D +TY +II L K GR D A + ++ ++ ++++L++++GKAGR+D K +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+M+ G P + +LI+ ++KAG L A + M +G PN
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
A +S ++ +N L++ + + +++ M+K LD Y + I + G
Sbjct: 269 AQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES-MEKTDSLLDGSTYELIIPSLAKSG 327
Query: 254 DLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
L +F LF QM P ++ L+ + K G++ ++ V+ ++ H+P +
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+LI K K+D A R++++M +GFRP +Y +++ K+ K+ A +F+ M +
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
G + TY+ L+ +G+ ++A ++ + G
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
++ + + G G L TS ++ +M G P + LI K GK+ AL +W+++
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMK 410
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
+P+ YT +I+ K+ K++ A +F M GF P Y+ LL++ + +V
Sbjct: 411 KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
A +++ M G++ +Y L+ L + A + ++K G VD
Sbjct: 471 SAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
YN ++ K A+ + E C D TYN ++ G A I + +
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K LD Y +I +L K+GR+D K F+QMK + P +++L++ KAG L
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
+ K M G P+ +L
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSL 389
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 38/210 (18%)
Query: 246 IHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
I ++ G L T+ L+ +M P+ Y +I K GK++ A+ V++D+
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVL----------- 350
P TY+ L++ + ++D A +I+N M N G RPG Y SLL +L
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGK 509
Query: 351 -----------------------FKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
K V A + M G+K + L +K
Sbjct: 510 ILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMK 569
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
NG ++A L L VD + Y+ I+
Sbjct: 570 NGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/560 (20%), Positives = 222/560 (39%), Gaps = 31/560 (5%)
Query: 214 RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----D 269
R+ DM ++ F + M +G + Y IHA+ D+ + S +M
Sbjct: 321 RRGDMH-RARETFER-MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 270 LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQP-DHFTYTTLIQGCCKTYKIDHATRIF 328
L TY+ ++ K G +A W D H+ + Y +I C+T ++ A +
Sbjct: 379 LVTYSVIVGGFSKAGHA-EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G +Y++++D + +F+++ + G + TY LI+ K
Sbjct: 438 REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
G+ A + +K++G + TYS+++ G D++
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK-DYSPMFPS 507
+++ G D + +K +++ P + + K+ ++ + M
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 508 KGDFSEIMS---ILTGSQDANLDSHDTKIEDE------EGDEWSLSPHMDKLANQVKSSG 558
G + + ++ G + +I DE +E + + M A+ V +G
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS-VGDTG 676
Query: 559 YASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
A + FT R+Q +G D DI L G++ A + + + + S+
Sbjct: 677 KAFEYFT-----RLQNEGLD-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
YN ++ + ++G EA +I +M ++ DI TY I K G + A+ ++ +
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
G +I Y TLI +A ++ +E+MK+ GI PD Y+ L+ +
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 739 KDAYKF------LKMMLDAG 752
+AY + K M++AG
Sbjct: 851 AEAYIYSGVMTICKEMVEAG 870
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++ + K ++ A ++ + T AGV +TY IM + G +A+ T +
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ DI TY +++ K GR A A+ + + + +YN LI+ + G + E
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+QMK G+ PD+ TY + I SKAG + A + ++ M G PN T TTL
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
+T+ I + K FE FT G+D +TY +++ + K G A A+ E
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
M + P + YN++I G + G A+ ++ ++ K+G DI Y + I+A KAG
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
++ + E+M++ G+ P++ TY TLI+ ++A L + A + M G P+
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
+F+ E G P TY +++ + K G ++A + M E+ ++ TY+M+I G
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
K+ A A+ + ++K+G D+++YN +I+A G +D + ++M+ P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYLGREIDKLRYQKA-SIL 781
T+ +I ++K+G ++ + + MM GC P H + ++ L ++K + +KA IL
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL---VEKRQMEKAVEIL 647
Query: 782 NE 783
+E
Sbjct: 648 DE 649
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAF 172
++F P++H S + +L++ D +++ GC P + +N L+ + + A
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRR-----CGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 173 SIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDK 232
I ++ A + +N ++ + Q ++ E+ F +L ++
Sbjct: 645 EILDEMT------------LAGVSANEHTYT-KIMQGYASVGDTGKAFEY---FTRLQNE 688
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKD 288
G +D + Y + A G + ++ ++ +M ++ YN LI + G V +
Sbjct: 689 -GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A + + + +PD TYT+ I C K ++ AT+ +M G +P Y +L+
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+A+ +A +E+M G+K Y+ L+ L+ AY
Sbjct: 808 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%)
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
+ + +G + A + FE G+ P S Y S++ ++ +EA + + +M E+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
+ TY++I+ G K G A+ A D + L+ +Y +I A + ++
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLG 767
+M+ GI+ + Y+T+++ ++ K K + + G TP VT L L
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 768 REIDKL 773
++ K+
Sbjct: 495 TKVGKI 500
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
++++ GK+S A ++ + E GV TY+ +++ FVK + A+A+ +M ++
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
D+ YN II +G D A + + K + +I+ K+G +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ F+ M+ G P V T+N LI + ++ A + L M AG + N T T +
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
Y I+ + + A A++ EM E+ A IA Y+ ++ G + + RL
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ G +V Y LIN K G+I + + MK G+ ++ TY+ +I K
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 740 DAYKFLKMMLDAGCTPN 756
+A+ + M+ G P+
Sbjct: 537 NAFAVFEDMVKEGMKPD 553
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D N + GK A +L + + G +P TYN+++ F K N+A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 641 TEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
++ +C D+ TY +I G K G+ AS++LD +L+ G Y V +N L++ K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
AG + + +M S G PDVVT+ +LI+ + + G + ++ + M G PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 760 DTTL 763
+ L
Sbjct: 385 YSIL 388
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 27/306 (8%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAF 172
++FN L+ L + L++L + GC P I YN+L+ ++N + A
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGF-----GCEPDIVTYNTLIQGFCKSNELNKAS 261
Query: 173 SIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDK 232
+F + S + + + + ++ KA E + ++ +
Sbjct: 262 EMFKDVKS---------------GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML-R 305
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKD 288
G +N+ + + G++ T+ + +M PD+ T+ LI C++G+V
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
+WE++NA P+ FTY+ LI C ++ A + Q+ + P +YN ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
KA KV+EA + E+M ++ K T+ ILI G GR A ++F + G
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 409 DGITYS 414
D IT S
Sbjct: 486 DKITVS 491
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/518 (20%), Positives = 195/518 (37%), Gaps = 65/518 (12%)
Query: 246 IHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQP-- 303
IH W S +++P DLC C L K + I +E + + P
Sbjct: 34 IHCPEAWLVKIVSTLFVYRVPDSDLC--------FCYLSKNLNPFISFEVVKKLDNNPHI 85
Query: 304 ----------------DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
+TY L + CK D A ++F M ++G P + L+
Sbjct: 86 GFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV 145
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
+ K+ A L + + V+ C N L++ L+K R E A LF + +
Sbjct: 146 SSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 408 VDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL 467
D T++I++ G D+VT +L+ G K + +
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 468 MKHVREGDLV-PKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL 526
K V+ G + P V+ + + + K G E S+L
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCK---------------AGKMREASSLLD------- 301
Query: 527 DSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ-RVQQKGSDSF-DIDM 584
D L + + V GYA T + R + F D+
Sbjct: 302 ------------DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+ + + G++S +L+E G+ P ++TY+ ++++ + +A ++ ++
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K YN +I G K G+ + A+ I++ + K+ D + + LI GR+
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
E F +M + G +PD +T ++L+ KAG+ K+AY
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 180/467 (38%), Gaps = 71/467 (15%)
Query: 58 HPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSF 117
+P F+ + R + S Y+L+ RSL + +K D V P
Sbjct: 82 NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV--SPN-- 137
Query: 118 NPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLK 177
N LL L+ S L + + GC ++ NSLL ++ + + A +F
Sbjct: 138 NRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC-MVVNSLLNTLVKLDRVEDAMKLF-- 194
Query: 178 LIELFXXXXXXXXXXAALDSNSNSNSIAFNQL---LVALRKADMKLEFQQVFHKLMDKKG 234
L S +++ FN L L + KA+ LE V M G
Sbjct: 195 --------------DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV----MSGFG 236
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDA 289
D YN I F +L + +F + PD+ TY +IS CK GK+++A
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 290 LIVWEDL------------------NACAHQ-----------------PDHFTYTTLIQG 314
+ +D+ A A + PD T+T+LI G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ ++ R++ +M+ G P Y+ L++ L ++ +A +L ++A + +
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
YN +I G K G+ A + +++KK D IT++I+++
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREG---DLVP 478
G D +T++SL+ + K G L + R+G ++VP
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
AS++F + V+ S D+ + +S + GK+ A L + G+ P + T
Sbjct: 260 ASEMF-----KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD---------- 669
+N ++ + K G A I +M C D+ T+ +I G ++G+
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 670 -------------LASAIL--DRLLKQGGYL------DIV----MYNTLINALGKAGRID 704
L +A+ +RLLK L DI+ MYN +I+ KAG+++
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
E N E+M+ PD +T+ LI H G + +A M+ GC+P+ +T ++L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
LA ++FE GV P + ++SSF +KG + A A++ + E N ++
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLL 178
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
L K+ R + A + D L+ D +N LI L G+ ++ + M G
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG-CTPNHVTDTTL 763
PD+VTYNTLI+ K+ L A + K + C+P+ VT T++
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D N + GK A +L + + G +P TYN+++ F K N+A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 641 TEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
++ +C D+ TY +I G K G+ AS++LD +L+ G Y V +N L++ K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
AG + + +M S G PDVVT+ +LI+ + + G + ++ + M G PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 760 DTTL 763
+ L
Sbjct: 385 YSIL 388
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 27/306 (8%)
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAF 172
++FN L+ L + L++L + GC P I YN+L+ ++N + A
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGF-----GCEPDIVTYNTLIQGFCKSNELNKAS 261
Query: 173 SIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDK 232
+F + S + + + + ++ KA E + ++ +
Sbjct: 262 EMFKDVKS---------------GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML-R 305
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKD 288
G +N+ + + G++ T+ + +M PD+ T+ LI C++G+V
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
+WE++NA P+ FTY+ LI C ++ A + Q+ + P +YN ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
KA KV+EA + E+M ++ K T+ ILI G GR A ++F + G
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 409 DGITYS 414
D IT S
Sbjct: 486 DKITVS 491
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/518 (20%), Positives = 195/518 (37%), Gaps = 65/518 (12%)
Query: 246 IHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQP-- 303
IH W S +++P DLC C L K + I +E + + P
Sbjct: 34 IHCPEAWLVKIVSTLFVYRVPDSDLC--------FCYLSKNLNPFISFEVVKKLDNNPHI 85
Query: 304 ----------------DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
+TY L + CK D A ++F M ++G P + L+
Sbjct: 86 GFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV 145
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
+ K+ A L + + V+ C N L++ L+K R E A LF + +
Sbjct: 146 SSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 408 VDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL 467
D T++I++ G D+VT +L+ G K + +
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 468 MKHVREGDLV-PKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANL 526
K V+ G + P V+ + + + K G E S+L
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCK---------------AGKMREASSLLD------- 301
Query: 527 DSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQ-RVQQKGSDSF-DIDM 584
D L + + V GYA T + R + F D+
Sbjct: 302 ------------DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+ + + G++S +L+E G+ P ++TY+ ++++ + +A ++ ++
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K YN +I G K G+ + A+ I++ + K+ D + + LI GR+
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
E F +M + G +PD +T ++L+ KAG+ K+AY
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 180/467 (38%), Gaps = 71/467 (15%)
Query: 58 HPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSF 117
+P F+ + R + S Y+L+ RSL + +K D V P
Sbjct: 82 NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV--SPN-- 137
Query: 118 NPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLK 177
N LL L+ S L + + GC ++ NSLL ++ + + A +F
Sbjct: 138 NRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC-MVVNSLLNTLVKLDRVEDAMKLF-- 194
Query: 178 LIELFXXXXXXXXXXAALDSNSNSNSIAFNQL---LVALRKADMKLEFQQVFHKLMDKKG 234
L S +++ FN L L + KA+ LE V M G
Sbjct: 195 --------------DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV----MSGFG 236
Query: 235 FALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDA 289
D YN I F +L + +F + PD+ TY +IS CK GK+++A
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 290 LIVWEDL------------------NACAHQ-----------------PDHFTYTTLIQG 314
+ +D+ A A + PD T+T+LI G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C+ ++ R++ +M+ G P Y+ L++ L ++ +A +L ++A + +
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
YN +I G K G+ A + +++KK D IT++I+++
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREG---DLVP 478
G D +T++SL+ + K G L + R+G ++VP
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
AS++F + V+ S D+ + +S + GK+ A L + G+ P + T
Sbjct: 260 ASEMF-----KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD---------- 669
+N ++ + K G A I +M C D+ T+ +I G ++G+
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 670 -------------LASAIL--DRLLKQGGYL------DIV----MYNTLINALGKAGRID 704
L +A+ +RLLK L DI+ MYN +I+ KAG+++
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
E N E+M+ PD +T+ LI H G + +A M+ GC+P+ +T ++L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
LA ++FE GV P + ++SSF +KG + A A++ + E N ++
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLL 178
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
L K+ R + A + D L+ D +N LI L G+ ++ + M G
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG-CTPNHVTDTTL 763
PD+VTYNTLI+ K+ L A + K + C+P+ VT T++
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/499 (20%), Positives = 204/499 (40%), Gaps = 51/499 (10%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + YN ++ + + + A +++++ A PD +TY+TLI K D A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M + ++Y++L+++ + S+A +F ++ + G+ YN +I+ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
A L ++ + G + ++YS ++ +DL T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 448 ITSLMVGIHKHGRWDWT---DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPM 504
++M+ ++ G+ D DRL +R+ D+ P V+ + + +
Sbjct: 333 -CNIMIDVY--GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR---------------V 374
Query: 505 FPSKGDFSEIMSILTGSQ----DANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+ F E + + Q + N+ +++T I K+ + A
Sbjct: 375 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI---------------KIYGKTMEHEKA 419
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
+ L Q +Q +G + I +T +SI+ GKL A LF+ +GV+ Y
Sbjct: 420 TNLV-----QEMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
+++ ++ + G A ++ E+ P +I I L K GR + A+ + + +
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELK---LPDNIPR-ETAITILAKAGRTEEATWVFRQAFE 529
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
G DI ++ +IN + R V + FE+M+++G PD ++ + K +
Sbjct: 530 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
Query: 741 AYKFLKMMLDAGCT-PNHV 758
A + M + GC P+ V
Sbjct: 590 ADTVYREMQEEGCVFPDEV 608
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%)
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
+ EA P + YN ++ + ++ F+ A + EM ++ D TY+ +I GK G
Sbjct: 145 VHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEG 204
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
D A + L ++ + D+V+Y+ LI + + F ++K SGI PD+V YN
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 727 TLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++I V+ KA L ++A +K M +AG PN V+ +TL
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
D+ N+ ++++ K KL +L + EAGV P + +Y++++S +V+ F EA ++
Sbjct: 259 DLVAYNSMINVY-GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSV 317
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
EM E C D+ T N++I G++ A + L K ++V YNT++ G+
Sbjct: 318 FAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
A E F M+ I +VVTYNT+I+++ K + A ++ M G PN +T
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 437
Query: 760 DTTL 763
+T+
Sbjct: 438 YSTI 441
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
+ D+ N + ++ + A +LF + ++P +YN+I+ + + F EA
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ M K ++ TYN +I+ GK + A+ ++ + +G + + Y+T+I+ G
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
KAG++D F++++SSG+ D V Y T+I + + GL+ A + L + P
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 506
Query: 759 TDTTLDYLGR 768
T L GR
Sbjct: 507 AITILAKAGR 516
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L L + +A LF+ + + P YTY+++++SF K+G F+ A + + +M +
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ Y+ +I+ ++ A +I RL + G D+V YN++IN GKA E
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLD 764
++M +G+ P+ V+Y+TL+ V+ + +A M + C + T + +D
Sbjct: 279 ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 338
Query: 765 YLG-----REIDKL 773
G +E D+L
Sbjct: 339 VYGQLDMVKEADRL 352
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 154/362 (42%), Gaps = 28/362 (7%)
Query: 63 LHFFNWCRSHHSSPLSPS--AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPL 120
L +W H + +PS AY+++LR++ R ++Q A+ +++ L
Sbjct: 139 LALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196
Query: 121 LHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIE 180
+ S F L L ++Q + ++Y++L+ S R A SIF +L
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRV---SGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 253
Query: 181 LFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTW 240
S + +A+N ++ KA + E ++ K M++ G +T
Sbjct: 254 ----------------SGITPDLVAYNSMINVYGKAKLFRE-ARLLIKEMNEAGVLPNTV 296
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDL 296
Y+ + + + S+F +M DL T N +I V +L VK+A ++ L
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+P+ +Y T+++ + A +F M + YN+++ + K +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+A L ++M G++ + TY+ +I K G+ + A TLF L+ G +D + Y +
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 417 VL 418
++
Sbjct: 477 IV 478
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 175/474 (36%), Gaps = 72/474 (15%)
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+ P YN +L + +A + A LF++M Q + TY+ LI K G ++A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 396 TLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGI 455
+ +++ D + YS ++ G DLV S M+ +
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS-MINV 269
Query: 456 HKHGRWDWTDRLM-KHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
+ + RL+ K + E ++P + + + ++N F E
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK---------------FLEA 314
Query: 515 MSILTGSQDAN--LDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRV 572
+S+ ++ N LD I M + Q+ A +LF +
Sbjct: 315 LSVFAEMKEVNCALDLTTCNI-------------MIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
+ ++ NT L ++ A LF + ++ TYN+++ + K
Sbjct: 362 EP------NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNT 692
+A ++ EM + + TY+ II GK G+ D A+ + +L G +D V+Y T
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 693 LINA-------------------------------LGKAGRIDEVNKFFEQMKSSGINPD 721
+I A L KAGR +E F Q SG D
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYLG--REIDK 772
+ + +I ++S+ + + + M AG P+ +V L+ G RE +K
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 6/229 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQV---FHKLMDKKGFALDTWGYNICIHAFGC 251
++ N S + + + +R+ ++ + F ++ G DT N + A
Sbjct: 192 MNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVK 251
Query: 252 WGDLATSFSLFHQM---PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
+ + +F ++ PD T+N LI CK K DA + + + PD TY
Sbjct: 252 ENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTY 311
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
T+ ++ CK + +M NG P + Y ++ L K+ +V+EA ++EKM +
Sbjct: 312 TSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE 371
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+G + Y+ LIH L K GR + A +F D+ +G D + Y+ ++
Sbjct: 372 DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+++IA N L+ AL K + +VF KL D D +NI IH F + +
Sbjct: 237 TDTIAMNSLMDALVKENSIEHAHEVFLKLFD--TIKPDARTFNILIHGFCKARKFDDARA 294
Query: 261 LFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
+ M PD+ TY + CK G + + E++ P+ TYT ++
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K+ ++ A ++ +M +G P Y+SL+ +L K + +A ++FE M +GV+
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVL 414
Query: 377 TYNILIHGLIKNGRPEAAYTLF 398
YN +I + + R E A L
Sbjct: 415 VYNTMISAALHHSRDEMALRLL 436
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D N + F K A + ++ P TY S + ++ K+G F ++
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM E C ++ TY +++ LGK + A + +++ + G D Y++LI+ L K
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEV---HSKAGLLKDAYKFLKMMLD---AGCT 754
GR + + FE M + G+ DV+ YNT+I HS+ + A + LK M D C+
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEM---ALRLLKRMEDEEGESCS 448
Query: 755 PN 756
PN
Sbjct: 449 PN 450
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 159/420 (37%), Gaps = 64/420 (15%)
Query: 42 LLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLS--RPAFXXXXX 99
++TE ++LQ+L + + FF W S S Y+ ++ L R
Sbjct: 129 VVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWEL 188
Query: 100 XXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLL 159
+ +++ ++ + + ++ L S +++ + +++ + ++ + NSL+
Sbjct: 189 VNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAM--NSLM 246
Query: 160 IASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMK 219
A ++ N I A +FLKL + ++ FN L+ KA K
Sbjct: 247 DALVKENSIEHAHEVFLKLFDTI-----------------KPDARTFNILIHGFCKA-RK 288
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNC 275
+ + LM F D Y + A+ GD + +M P++ TY
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
++ L K +V +AL V+E + PD Y++LI KT + A IF M N G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-------------------------- 369
R +VYN+++ ++ A +L ++M E
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 370 ------------GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
V TY +LI GL +G+ E A F + +KG T ++V
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%)
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
+ P + T+N ++ F K F++A A++ M D+ TY ++ K G +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
+L+ + + G ++V Y ++++LGK+ ++ E +E+MK G PD Y++LI +
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 733 SKAGLLKDAYKFLKMMLDAG 752
SK G KDA + + M + G
Sbjct: 389 SKTGRFKDAAEIFEDMTNQG 408
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 108/282 (38%), Gaps = 20/282 (7%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWG-----------YNICIHAFGCWG 253
A +L R D+ E +K + K LDT YN + AF
Sbjct: 171 AMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL--- 227
Query: 254 DLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
++ S+ + D N L+ L K ++ A V+ L +PD T+ LI
Sbjct: 228 EMEKSYGV-----KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI-KPDARTFNILIH 281
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G CK K D A + + M F P + Y S ++ K ++ E+M + G
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
+ TY I++H L K+ + A ++ +K+ G D YS ++
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 434 XXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGD 475
+G D++ +++ H R + RL+K + + +
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDR 677
T + +M K G +N+A EM + D N ++ L K + A + +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
L D +N LI+ KA + D+ + MK + PDVVTY + +E + K G
Sbjct: 265 LFDTIKP-DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 738 LKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ + L+ M + GC PN VT T +
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIV 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGE----KLCPADIATYNMIIQGLGKIGRADLA-S 672
+TYN+++ K F+ W ++ EM + KL D T + +++ L K G+ + A
Sbjct: 167 HTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVD 224
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
A L+ G D + N+L++AL K I+ ++ F ++ + I PD T+N LI
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGF 283
Query: 733 SKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
KA DA + +M TP+ VT T+
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSF 314
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/470 (19%), Positives = 166/470 (35%), Gaps = 105/470 (22%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TYN ++ VL GK ++ ++WE +N + K +D +++ ++
Sbjct: 168 TYNAMVDVL---GKCRNFDLMWELVNEMNKNEE-----------SKLVTLDTMSKVMRRL 213
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+G YN +D + K GVK N L+ L+K
Sbjct: 214 AKSG------KYNKAVDAFLEMEK------------SYGVKTDTIAMNSLMDALVKENSI 255
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
E A+ +F L D I D T L
Sbjct: 256 EHAHEVFLKL------FDTIK------------------------------PDARTFNIL 279
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDF 511
+ G K ++D +M ++ + P V+ + + +EA K +GDF
Sbjct: 280 IHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK---------------EGDF 324
Query: 512 SEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQR 571
+ +L EE E +P++ + S G + Q+
Sbjct: 325 RRVNEML-----------------EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
++ D ++ + I G+ A ++FE T GV YN+++S+ +
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Query: 632 YFNEAWAIITEM----GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
A ++ M GE C ++ TY +++ + L +L ++K +D+
Sbjct: 428 RDEMALRLLKRMEDEEGES-CSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDV 486
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
Y LI L +G+++E FFE+ G+ P T L++ K +
Sbjct: 487 STYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNM 536
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 192/488 (39%), Gaps = 77/488 (15%)
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK---ATKVSEACQLF 363
TY +++ + D + + N+ + P N +D+L A + + ++F
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNS-YPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 364 EKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI-TYSIIVLQXXX 422
++ GVK S ++ N L++ LI+N R + + +F + K+ I T +++V
Sbjct: 144 LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 203
Query: 423 XXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLR 482
G V +LVT T+++ G G + R+++ + + P
Sbjct: 204 KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT 263
Query: 483 WKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWS 542
+ M+ K G FSE +++ D + + E +E +
Sbjct: 264 YTVLMDGYCK---------------LGRFSEAATVM----------DDMEKNEIEPNEVT 298
Query: 543 LSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLAC 602
+ L + K SG A +F D + +F+ SL C
Sbjct: 299 YGVMIRALCKE-KKSGEARNMF----------------DEMLERSFMP------DSSLCC 335
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
K ++ + + +EA + +M + C D A + +I L
Sbjct: 336 K-------------------VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K GR A + D ++G ++ YNTLI + + G + E + ++ M P+
Sbjct: 377 CKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT----DTTLDYLGREIDKLRYQKA 778
TYN LIE SK G +K+ + L+ ML+ GC PN T L LG+E D ++
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Query: 779 SILNEKDD 786
+++N K D
Sbjct: 496 AVMNGKVD 503
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 227 HKLMDK---KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+K++D+ G + Y + + GD+ ++ + +M PD TY L+
Sbjct: 211 YKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDG 270
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
CKLG+ +A V +D+ +P+ TY +I+ CK K A +F++M F P
Sbjct: 271 YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPD 330
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
+ + ++D L + KV EAC L+ KM + + LIH L K GR A LF
Sbjct: 331 SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF- 389
Query: 400 DLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHG 459
D +KG +TY+ ++ R + T L+ G+ K+G
Sbjct: 390 DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Query: 460 RWDWTDRLMKHVREGDLVP 478
R+++ + E P
Sbjct: 450 NVKEGVRVLEEMLEIGCFP 468
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICI-------------HA 248
N + + ++ AL K E + +F +++++ F D+ ++C A
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLER-SFMPDS---SLCCKVIDALCEDHKVDEA 350
Query: 249 FGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G W + + + PD + LI LCK G+V +A ++++ P TY
Sbjct: 351 CGLWRKMLKNNCM------PDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTY 403
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
TLI G C+ ++ A R+++ M+ +P YN L++ L K V E ++ E+M +
Sbjct: 404 NTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAA 394
G + T+ IL GL K G+ E A
Sbjct: 464 IGCFPNKTTFLILFEGLQKLGKEEDA 489
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
F F + P L TYN LI+ +C+ G++ +A +W+D+ +P+ FTY LI+G K
Sbjct: 389 FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
+ R+ +M G P + L + L K K +A ++ G
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/497 (20%), Positives = 195/497 (39%), Gaps = 49/497 (9%)
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQ---PDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
+S+L L + + VW D + PD Y L Q C K ++ ++M +
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
G +P +Y + L + K+ EA ++FE M + GV + TY+ +I G K G
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 394 AYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMV 453
AY L+ ++ + + + +V G +L L+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 454 GIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGM-------EASIKNPPSKKKDYSPMFP 506
G K G L+ + +L P V + + + + N +K +FP
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
S ++ S++ G E+++ +D L +++ +SG + T
Sbjct: 408 SSATYN---SLIHGY----------------CKEYNMEQALD-LCSEMTASGVEPNIITF 447
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
+ +++ + ++ K + L FE+ T G+ P TY +++ +
Sbjct: 448 ST---------------LIDGYCNVRDIKAAMGL---YFEM-TIKGIVPDVVTYTALIDA 488
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD 686
K+ EA + ++M E + T+ ++ G K GR +A +Q +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
V + LI L + G I ++FF M+S GI PD+ +Y ++++ H + + D
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 747 MMLDAGCTPNHVTDTTL 763
M+ G PN + + L
Sbjct: 609 DMIKTGILPNLLVNQLL 625
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 254 DLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+L T+ SLF M P+L YNCLI CK G + +A+ + ++ + PD FTYT
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
LI G C ++ A R+F +M N P + YNSL+ K + +A L +M
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
GV+ + T++ LI G +AA L+ ++ KG D +TY+ ++
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 4/266 (1%)
Query: 217 DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCT 272
D K+E + +LM K G + + Y+ I + G++ ++ L+ ++ P++
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
+ L+ CK ++ A ++ + P+ + Y LI G CK+ + A + ++M
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
+ P Y L++ L +V+EA +LF+KM E + S TYN LIHG K E
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 393 AAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLM 452
A L ++ G + IT+S ++ +G V D+VT T+L+
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 453 VGIHKHGRWDWTDRLMKHVREGDLVP 478
K RL + E + P
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHP 512
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M+ + D + Y I I+ +A + LF +M P TYN LI CK
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
++ AL + ++ A +P+ T++TLI G C I A ++ +M G P + Y +
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
L+D FK + EA +L+ M + G+ + T+ L+ G K GR A +
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + F L+ KA + + +F M K G + + YN IH G++ + L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVH-MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M PD+ TY LI+ LC +V +A +++ + P TY +LI G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
Y ++ A + ++M +G P I +++L+D + A L+ +M +G+ T
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y LI K + A L+ D+ + G + T++ +V
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
V ++LM +G D Y + G + L +M P++ Y I L
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
C+ K+++A ++E + P+ +TY+ +I G CKT + A ++ ++ P
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+V+ +L+D KA ++ A LF M + GV + YN LIHG K+G A L +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 401 LKKKGQFVDGITYSIIV 417
++ D TY+I++
Sbjct: 365 MESLNLSPDVFTYTILI 381
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 488 EASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHM 547
E S ++ SK D FS ++ +LTG+ L K +
Sbjct: 62 ETSSRSRVSKSNDLQ-------SFSAVIHVLTGAHKYTLARCLIK------------SLI 102
Query: 548 DKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE- 606
++L + S + +LF ++ S F I + + + FL G LFE
Sbjct: 103 ERLKRHSEPSNMSHRLFNA-----LEDIQSPKFSIGVFSLLIMEFLEMG-------LFEE 150
Query: 607 ---IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
+ E P S SI++ V++ F+ W M + D+ Y ++ Q
Sbjct: 151 ALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCF 210
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
K G +LD + G ++ +Y I L + +++E K FE MK G+ P++
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TY+ +I+ + K G ++ AY K +L A PN V TL
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLAT 257
N + + + L+ L D E ++F K+ +++ F + YN IH + ++
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP-SSATYNSLIHGYCKEYNMEQ 427
Query: 258 SFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+ L +M P++ T++ LI C + +K A+ ++ ++ PD TYT LI
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
K + A R+++ M G P + L+D +K ++S A +++ Q+
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
+ + LI GL +NG A F D++ G D +Y
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDL 270
KA M L F+ M KG D Y I A ++ + L+ M P+
Sbjct: 461 KAAMGLYFE------MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
T+ CL+ K G++ A+ +++ N +H +T LI+G C+ I A+R F+
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M + G P Y S+L + ++++ L M + G+ + +L NG
Sbjct: 575 MRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGY 634
Query: 391 PEAA 394
++A
Sbjct: 635 VKSA 638
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 95/182 (52%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
++ N ++S L +G++ +A + + + P YT N +MS + + G ++ ++
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+M A +YN +I G + G A + + + K G ++V +NTLI+ +A
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
++ E +K F +MK+ + P+ VTYNTLI +S+ G + A++F + M+ G + +T
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 762 TL 763
L
Sbjct: 383 AL 384
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 156/392 (39%), Gaps = 47/392 (11%)
Query: 32 LNLLPPQHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSR 91
LN L + V+L+I + L L FFNW ++ + S ++++L +L++
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLL----SLEFFNWAKTRNPGSHSLETHAIVLHTLTK 127
Query: 92 -PAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGC 150
F + V L + F+ LL+S + E
Sbjct: 128 NRKFKSAESILRDVLVNGGVDLPAKVFDALLYS------YREC---------------DS 166
Query: 151 TPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLL 210
TP +++SL A F+++ + L + + N A+ L
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDY-----------GFLPTVESCN--AYMSSL 213
Query: 211 VALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL 270
+ + D+ L F ++ M + + + + N+ + + G L L M
Sbjct: 214 LGQGRVDIALRF----YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 271 ----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
+YN LI+ C+ G + AL + + QP+ T+ TLI G C+ K+ A++
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+F +M P T+ YN+L++ + A + +E M G++ TYN LI GL
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
K + A +L K+ + T+S +++
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + + N +S L G+V AL + ++ C P+ +T ++ G C++ K+D +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M GFR + YN+L+ + +S A +L M + G++ + T+N LIHG +
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
+ + A +F ++K + +TY+ ++ G D++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+L+ G+ K + + +K + + +LVP
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+N +S + GKL +L + G +YN++++ +KG + A + MG
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ ++ T+N +I G + + AS + + + V YNTLIN + G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+F+E M +GI D++TYN LI K + A +F+K + PN T + L
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
Q +++ G + D+ NT ++ KG LS A KL + ++G+ P T+N+++ F +
Sbjct: 262 QDMERLGFRATDVS-YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
EA + EM + TYN +I G + G ++A + ++ G DI+
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LI L K + + +F +++ + P+ T++ LI ++ K M+
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 750 DAGCTPNHVT 759
+GC PN T
Sbjct: 441 RSGCHPNEQT 450
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M++ GF YN I G L+++ L + M P++ T+N LI C+ K
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+++A V+ ++ A P+ TY TLI G + + A R + M NG + + YN+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+ L K K +A Q +++ +E + + T++ LI G + + L+ + + G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+ T++++V R +D T+ + G+ G+
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 466 RLMKHV 471
+L++ +
Sbjct: 504 KLLQEM 509
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 202 NSIAFNQLLVALRKADMKL-EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N + FN L+ +A MKL E +VF + M A +T YN I+ + GD +F
Sbjct: 307 NVVTFNTLIHGFCRA-MKLQEASKVFGE-MKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 261 LFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
+ M D+ TYN LI LCK K + A ++L+ P+ T++ LI G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
D ++ M +G P +N L+ + A Q+ +M + + +
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKK 404
T + + +GL G+ + L +++ K
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+ ++ F K A F + G P + N+ MSS + +G + A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+ T NM++ G + G+ D +L + + G V YNTLI + G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K M SG+ P+VVT+NTLI +A L++A K M PN VT TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
NT + F KL A K+F V P + TYN++++ + ++G A+ +M
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
DI TYN +I GL K + A+ + L K+ + ++ LI D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
+ ++ M SG +P+ T+N L+ + A + L+ M+
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 185/477 (38%), Gaps = 55/477 (11%)
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
++L+++ ++ +P++FT+ + + C + + + + + F V + +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
D+ K V A ++FE+M + T+N ++ G ++G + A++LF +++
Sbjct: 95 DMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 408 VDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL 467
D +T ++ G V + + + K G D +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 468 MKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLD 527
+ + GD V+ W + MF + F E DA
Sbjct: 211 FEAIDRGD--RTVVSWNS------------------MFKAYSVFGEAF-------DA-FG 242
Query: 528 SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQK----GSDSFDID 583
+ + +E P + N S L T G+ + G+D DI+
Sbjct: 243 LYCLMLREE------FKPDLSTFINLAASCQNPETL---TQGRLIHSHAIHLGTDQ-DIE 292
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+NTF+S++ A LF+I T VS+T ++S + +KG +EA A+ M
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTC--VSWTV--MISGYAEKGDMDEALALFHAM 348
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY-NTLINALGKAGR 702
+ D+ T +I G GK G + I R G D VM N LI+ K G
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
I E F+ VVT+ T+I ++ G+ +A K M+D PNH+T
Sbjct: 409 IHEARDIFDNTP----EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 95/182 (52%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
++ N ++S L +G++ +A + + + P YT N +MS + + G ++ ++
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+M A +YN +I G + G A + + + K G ++V +NTLI+ +A
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
++ E +K F +MK+ + P+ VTYNTLI +S+ G + A++F + M+ G + +T
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 762 TL 763
L
Sbjct: 383 AL 384
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 156/392 (39%), Gaps = 47/392 (11%)
Query: 32 LNLLPPQHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSR 91
LN L + V+L+I + L L FFNW ++ + S ++++L +L++
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLL----SLEFFNWAKTRNPGSHSLETHAIVLHTLTK 127
Query: 92 -PAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGC 150
F + V L + F+ LL+S + E
Sbjct: 128 NRKFKSAESILRDVLVNGGVDLPAKVFDALLYS------YREC---------------DS 166
Query: 151 TPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLL 210
TP +++SL A F+++ + L + + N A+ L
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDY-----------GFLPTVESCN--AYMSSL 213
Query: 211 VALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL 270
+ + D+ L F ++ M + + + + N+ + + G L L M
Sbjct: 214 LGQGRVDIALRF----YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 271 ----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
+YN LI+ C+ G + AL + + QP+ T+ TLI G C+ K+ A++
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+F +M P T+ YN+L++ + A + +E M G++ TYN LI GL
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
K + A +L K+ + T+S +++
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + + N +S L G+V AL + ++ C P+ +T ++ G C++ K+D +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M GFR + YN+L+ + +S A +L M + G++ + T+N LIHG +
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
+ + A +F ++K + +TY+ ++ G D++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
+L+ G+ K + + +K + + +LVP
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+N +S + GKL +L + G +YN++++ +KG + A + MG
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ ++ T+N +I G + + AS + + + V YNTLIN + G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+F+E M +GI D++TYN LI K + A +F+K + PN T + L
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
Q +++ G + D+ NT ++ KG LS A KL + ++G+ P T+N+++ F +
Sbjct: 262 QDMERLGFRATDVS-YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
EA + EM + TYN +I G + G ++A + ++ G DI+
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LI L K + + +F +++ + P+ T++ LI ++ K M+
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 750 DAGCTPNHVT 759
+GC PN T
Sbjct: 441 RSGCHPNEQT 450
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M++ GF YN I G L+++ L + M P++ T+N LI C+ K
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+++A V+ ++ A P+ TY TLI G + + A R + M NG + + YN+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L+ L K K +A Q +++ +E + + T++ LI G + + L+ + + G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+ T++++V R +D T+ + G+ G+
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 466 RLMKHV 471
+L++ +
Sbjct: 504 KLLQEM 509
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 202 NSIAFNQLLVALRKADMKL-EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N + FN L+ +A MKL E +VF + M A +T YN I+ + GD +F
Sbjct: 307 NVVTFNTLIHGFCRA-MKLQEASKVFGE-MKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 261 LFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
+ M D+ TYN LI LCK K + A ++L+ P+ T++ LI G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
D ++ M +G P +N L+ + A Q+ +M + + +
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 377 TYNILIHGLIKNGRPEAAYTLFCDLKKK 404
T + + +GL G+ + L +++ K
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+ ++ F K A F + G P + N+ MSS + +G + A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+ T NM++ G + G+ D +L + + G V YNTLI + G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K M SG+ P+VVT+NTLI +A L++A K M PN VT TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
NT + F KL A K+F V P + TYN++++ + ++G A+ +M
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
DI TYN +I GL K + A+ + L K+ + ++ LI D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
+ ++ M SG +P+ T+N L+ + A + L+ M+
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + + F G+ + A +L E ++P T+++++++ VK+G +EA I
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + TYN +I G K R + A +LD + + D+V ++TLIN KA
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
R+D + F +M GI + VTY TLI + G L A L +M+ +G PN++T
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ TY+ +I C+ G+ DA + D+ PD T++ LI K K+ A I
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+ M G P TI YNS++D K ++++A ++ + MA + T++ LI+G K
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
R + +FC++ ++G + +TY+ ++
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 196 DSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF---GCW 252
+++ ++ + +N ++ L K + Q +F ++ DK G D Y+ I +F G W
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDVITYSGMIDSFCRSGRW 127
Query: 253 GDLATSF-SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
D + + PD+ T++ LI+ L K GKV +A ++ D+ P TY ++
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
I G CK +++ A R+ + M + P + +++L++ KA +V ++F +M + G+
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
A+ TY LIHG + G +AA L + G + IT+
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A LF + G+ P TY+ ++ SF + G + +A ++ +M E+ D+ T++ +I
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
L K G+ A I +L++G + + YN++I+ K R+++ + + M S +P
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
DVVT++TLI + KA + + + M G N VT TTL
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
++N + + L+L K+ E +A V YN+I+ K G+ A + TEM
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHV----VIYNAIIDRLCKDGHHIHAQNLFTEM 102
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+K D+ TY+ +I + GR A +L ++++ D+V ++ LINAL K G++
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
E + + M GI P +TYN++I+ K L DA + L M C+P+ VT +TL
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + ++ + +GK+S A +++ G+ P + TYNS++ F K+ N+A ++
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M K C D+ T++ +I G K R D I + ++G + V Y TLI+ +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
G +D M SSG+ P+ +T+ +++ L+ A+ L+
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
M + G D + ++ C G + + +L +M Y +I+ LCK+G + A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
L + + + Y +I CK HA +F +MH+ G P I Y+ ++D
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVD 409
++ + ++A QL M + + T++ LI+ L+K G+ A ++ D+ ++G F
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 410 GITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD 462
ITY+ ++ + D+VT ++L+ G K R D
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
Y I+ GD ++ +L +M + YN +I LCK G A ++ +++
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
PD TY+ +I C++ + A ++ M P + +++L++ L K KVS
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
EA +++ M + G+ + TYN +I G K R A + + K D +T+S ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 418 LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLV 477
RG V + VT T+L+ G + G D L+ + +
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 478 PKVLRWKAGMEASIKNPPSKKKDYS 502
P + +++ M AS+ + +K ++
Sbjct: 284 PNYITFQS-MLASLCSKKELRKAFA 307
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ T ++ +G++ A L + E G P Y +I++ K G A ++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
++M E A + YN II L K G A + + +G + D++ Y+ +I++ ++
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
GR + + M INPDVVT++ LI K G + +A + ML G P +T
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 132/342 (38%), Gaps = 36/342 (10%)
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+PD T+TTL+ G C ++ A + ++M G +P Y ++++ L K A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
L KM + +KA YN +I L K+G A LF ++ KG F D ITYS ++
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVL 481
R D+VT ++L+ + K G+ + + + + P +
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 482 RWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEW 541
+ + ++ K + D M S S ++T S N ++++ G E
Sbjct: 183 TYNSMIDGFCKQ--DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN--GMEI 238
Query: 542 SLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
H G + T T T + F G L A
Sbjct: 239 FCEMH---------RRGIVANTVTYT-------------------TLIHGFCQVGDLDAA 270
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
L + +GV P T+ S+++S K +A+AI+ ++
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
E G P T+ ++M+ +G +A A++ M E+ Y II GL K+G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE----GHQPYGTIINGLCKMGD 56
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
+ A +L ++ + +V+YN +I+ L K G F +M GI PDV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+I+ ++G DA + L+ M++ P+ VT + L
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P TYN +I CK ++ DA + + + + + PD T++TLI G CK ++D+ I
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +MH G T+ Y +L+ + + A L M GV + T+ ++ L
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 388 NGRPEAAYTLFCDLKK 403
A+ + DL+K
Sbjct: 299 KKELRKAFAILEDLQK 314
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMP-----GPDLCTYNCLISVLCKLGKVKDALIVWED 295
+N + A+ L + F ++P PDL TYN +I LC+ G + D L ++E+
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 296 LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK 355
L +PD ++ TL++ + RI++ M + P YNS + L + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
++A L + M EG+ TYN LI + E + ++K+KG D +TY +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 416 IV 417
++
Sbjct: 339 LI 340
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 26/291 (8%)
Query: 483 WKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWS 542
+K A+ K+ + + S FPSK S S+ G Q +N D+ D+K
Sbjct: 16 FKESSIATAKSAKPRSQTKSTKFPSKLKAS-TASVGDGGQSSN-DAKDSK-------NSK 66
Query: 543 LSPHMDKLANQVKSSGY----------------ASQLFTPTPGQRVQQKGSDSFDIDMVN 586
L+ ++K +S + A + T + Q+K D D V
Sbjct: 67 LTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVI 126
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
+ ++ G A KLF+ E + ++N+++S++V +EA E+ EK
Sbjct: 127 RIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 647 L-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
L D+ TYN +I+ L + G D +I + L K G D++ +NTL+ + E
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
++ ++ MKS ++P++ +YN+ + ++ DA + +M G +P+
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ NT + KG + +FE + G +P ++N+++ F ++ F E I
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M K +I +YN ++GL + + A ++D + +G D+ YN LI A
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
++EV K + +MK G+ PD VTY LI + K G L A
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 4/189 (2%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+FN LL A + E + F +L +K G D YN I A G + S+F +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 265 MPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+ PDL ++N L+ + + +W+ + + P+ +Y + ++G + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
A + + M G P YN+L+ + E + + +M ++G+ TY +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 381 LIHGLIKNG 389
LI L K G
Sbjct: 339 LIPLLCKKG 347
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 204 IAFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAF----------GCW 252
+ +N ++ AL RK M + +F +L +K GF D +N + F W
Sbjct: 194 VTYNTMIKALCRKGSMD-DILSIFEEL-EKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
DL S +L P++ +YN + L + K DAL + + + PD TY LI
Sbjct: 252 -DLMKSKNL-----SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
++ + +N+M G P T+ Y L+ +L K + A ++ E+ + +
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
+ Y ++ L+ G+ + A L + K + F
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYF 400
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
K + A L ++ G+ P +TYN++++++ E EM EK D TY
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
M+I L K G D A + + +K MY ++ L AG+IDE + + K
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 22/230 (9%)
Query: 549 KLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDI-DMVNTFLSIFLAKGKLSLACKLFEI 607
K +Q KS+ + S+L T V G S D D N+ L+ + K K S + F
Sbjct: 28 KPRSQTKSTKFPSKLKASTAS--VGDGGQSSNDAKDSKNSKLTQKVEKFKRSCESESFR- 84
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE-KLCPADIATYNMIIQGL---G 663
+ + S+F+++ + ++ I E+ + + DI + + +I+ + G
Sbjct: 85 -----------QVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYG 133
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDV 722
G A+ A + D + + + +N L++A + ++DE K F+++ GI PD+
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL--DYLGREI 770
VTYNT+I+ + G + D + + G P+ ++ TL ++ RE+
Sbjct: 194 VTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRREL 243
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G+ P TYNS++ + K +A+ +I +M E+ D+ TY +I GLG IG+ D A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+L + + G Y D+ YN I A R+ + +K ++M G++P+ TYN V
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPN 756
S A L +++ ML C PN
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPN 385
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
++ FN LL L + + + V+H L K F D +NI + W + +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL--KHQFQPDLQTFNILLSG---WKSSEEAEAF 233
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M G PD+ TYN LI V CK +++ A + + + PD TYTT+I G
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ D A + +M G P YN+ + A ++ +A +L ++M ++G+ + T
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 378 YNILIHGL 385
YN+ L
Sbjct: 354 YNLFFRVL 361
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
G+ L P D+ TYN +I K + A ++D++ ++ D++ Y T+I LG G+
Sbjct: 239 GKGLKP-DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
D+ + ++MK G PDV YN I A L DA K + M+ G +PN T
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D +N L+ LC+ + DA V+ L QPD T+ L+ G + + +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGWKSSEEAEAFF--- 234
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G +P + YNSL+DV K ++ +A +L +KM +E TY +I GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G+P+ A + ++K+ G + D Y+ +
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M KG D YN I + ++ ++ L +M PD+ TY +I L +G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
A V +++ PD Y I+ C ++ A ++ ++M G P YN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
VL A + + +L+ +M + Q+ LI ++ + + A L+ D+ KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 260 SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
SL HQ PDL T+N L+S ++A +E++ +PD TY +LI CK
Sbjct: 205 SLKHQFQ-PDLQTFNILLS---GWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDR 260
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+I+ A ++ ++M P I Y +++ L + +A ++ ++M + G YN
Sbjct: 261 EIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYN 320
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
I R A L ++ KKG + TY++
Sbjct: 321 AAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 573 QQKGSDSFDIDMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
+Q D F D++ N L GK+ +LF+ G P SYTYN ++ K
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKG 302
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
A + M E + Y +I GL + G + LD ++K G D+V Y
Sbjct: 303 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCY 362
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
+I +G +D+ + F +M G P+V TYN++I AG ++A LK M
Sbjct: 363 TVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 751 AGCTPNHVTDTTLDYLGREIDKLRYQKASI 780
GC PN V +TL R+ KL + I
Sbjct: 423 RGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E G+DP Y +++ + G + EM + C D+ Y ++I G G D
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A + + +G ++ YN++I L AG E ++M+S G NP+ V Y+TL+
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 730 EVHSKAGLLKDAYKFLKMMLDAG 752
KAG L +A K ++ M+ G
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ TYN L+ +LGK+ +++++ PD +TY L+ K K A
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF-EKMAQEGVKASCQTYNILIHGLI 386
N M G P + Y +L+D L +A + EAC+ F ++M + G + Y ++I G +
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+G + A +F ++ KGQ + TY+ ++ RG + V
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFV 430
Query: 447 TITSLMVGIHKHGRWDWTDRLMKH-VREG---DLVPKVLRWK 484
++L+ + K G+ ++++ V++G LVPK+++++
Sbjct: 431 VYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYR 472
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P ++YN+I++S + + + +M E D+ TYN+++ ++G+ D +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
D + + G D YN L++ LGK + MK GI+P V+ Y TLI+ S+
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
AG L+ FL M+ AGC P+ V T +
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
T+N LI + G K A++ + ++P +Y ++ + ++ QM
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+GF P + YN LL ++ K+ +LF++MA++G TYNIL+H L K +P
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
AA T +K+ G + Y+ ++ G D+V T +
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
+ G G D + + + +P V + +
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 36/186 (19%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA------- 671
+Y+ +M F + G + W ++ EM + P T+N++I G+ G A A
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 672 ------------SAILD----------------RLLKQGGYLDIVMYNTLINALGKAGRI 703
+AIL+ ++L+ G D++ YN L+ + G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
D ++ F++M G +PD TYN L+ + K A L M + G P+ + TTL
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 764 -DYLGR 768
D L R
Sbjct: 331 IDGLSR 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ ++ ++ G+L A ++F T G P +TYNS++ G F EA ++
Sbjct: 358 DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
EM + C + Y+ ++ L K G+ A ++ ++K+G Y+ +V
Sbjct: 418 KEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 121/585 (20%), Positives = 220/585 (37%), Gaps = 98/585 (16%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFG----------CWGDLATSFSLFHQMPGPDLCTY 273
+VF + + + YNI + A G CW ++A H P TY
Sbjct: 130 RVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMA------HNGVLPTNNTY 183
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
L+ V K G VK+AL+ + + H PD T T+++ + + D A R F
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFK---- 239
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEA-----------CQLFEKMAQEGVKAS-------- 374
G+ G + + LD + K A +LF+ A+ ++ S
Sbjct: 240 -GWCAGKVDLD--LDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSD 296
Query: 375 --------CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
T+N LI K GR A LF ++ K G +D +T++ ++
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
+G D T L+ G + + +R+ L P + +A
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
+ + + +E+ +++ A +D + +I DE S+
Sbjct: 417 LH---------------ILCQRKMVAEVEAVI-----AEMDRNSIRI-----DEHSVPVI 451
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKG-SDSFDIDMV---NTFLSIFLAKGKLSLAC 602
M N+ G VQ K + F +D V T ++ + L
Sbjct: 452 MQMYVNE---------------GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWV 496
Query: 603 KLFEIF----TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
+ +F +G YN ++ ++ K +A ++ M + D TYN +
Sbjct: 497 EAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
Q L + D A IL +L G Y +I + + G + + +E M+ +G+
Sbjct: 557 FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV 616
Query: 719 NPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
P+ V Y +LI +++G++++A ++ +MM + G NH+ T+L
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 138/722 (19%), Positives = 263/722 (36%), Gaps = 89/722 (12%)
Query: 36 PPQHKQLLTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFX 95
P KQ L+ + NP LHF + S P S ++ ++ +
Sbjct: 265 PVNLKQFLSMELFKVGARNPI---EKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 96 XXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTP--L 153
+ + V + +FN ++H+ + E +L ++++ G +P
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK-----GISPDTK 376
Query: 154 IYNSLLIASLRNNHIPLAFSIFLKL--IELFXXXXXXXXXXAALDSNSNSNSIAFNQLLV 211
YN LL I A + K+ + LF +++ +L
Sbjct: 377 TYNILLSLHADAGDIEAALEYYRKIRKVGLF------------------PDTVTHRAVLH 418
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC 271
L + M E + V + MD+ +D + + + G + + +LF + +
Sbjct: 419 ILCQRKMVAEVEAVIAE-MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL 477
Query: 272 TYNCLISVLCKLGK----VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
+ L +V+ + V+ + + N + D Y +I+ K + A +
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F M N G P YNSL +L V EA ++ +M G K C+TY +I ++
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
G A L+ ++K G + + Y ++ G + +
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS 507
+TSL+ K G + R+ +++ + P V + +
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV---------------AASNSMLSLCAD 702
Query: 508 KGDFSEIMSILTGSQD---ANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
G SE SI ++ ++ S T + +G + ++A +++ SG S
Sbjct: 703 LGIVSEAESIFNALREKGTCDVISFATMMYLYKG--MGMLDEAIEVAEEMRESGLLS--- 757
Query: 565 TPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSI 623
D N ++ + A G+LS C+LF E+ E + T+ ++
Sbjct: 758 ----------------DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTL 801
Query: 624 MSSFVKKGYFNEAWA-IITEMGEKLCPADIATYNMIIQGLGKIGRA-----DLASAILDR 677
+ K G +EA + + T E A A + +G A +L S + R
Sbjct: 802 FTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPR 861
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ YN +I +G ID K + +M+ G+ PD+VT L+ ++ KAG+
Sbjct: 862 --------EHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGM 913
Query: 738 LK 739
++
Sbjct: 914 VE 915
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 170/463 (36%), Gaps = 38/463 (8%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNC 275
+E + VF+ + G D YN+ I A+G + SLF M PD CTYN
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
L +L + V +A + ++ +P TY +I + + A ++ M G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+P +VY SL++ ++ V EA Q F M + GV+++ LI K G E A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 396 TLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGI 455
++ D K + + S +L D+++ ++M
Sbjct: 676 RVY-DKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLY 734
Query: 456 HKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIM 515
G D + + +RE L+ + M + + G SE
Sbjct: 735 KGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC---------------YAADGQLSECC 779
Query: 516 SILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQK 575
+ H+ +E + +W L +K G S+ + ++Q
Sbjct: 780 ELF----------HEMLVERKLLLDWGT---FKTLFTLLKKGGVPSEAVS-----QLQTA 821
Query: 576 GSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
+++ + ++F A G + A + + T + + YN+++ ++ G +
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
A M EK DI T ++ GK G + + RL
Sbjct: 882 ALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 594 AKGKLSL---ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
A GK L A LF+ G P TYNS+ +EA I+ EM + C
Sbjct: 524 AYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
TY +I ++G A + + + K G + V+Y +LIN ++G ++E ++F
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M+ G+ + + +LI+ +SK G L++A + M D+ P+ ++
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
++ ++ G LS A L+E + GV P Y S+++ F + G EA M E
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
++ +I+ K+G + A + D++ G D+ N++++ G + E
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
F ++ G DV+++ T++ ++ G+L +A + + M ++G
Sbjct: 710 ESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
T+ S+F + L + I E +G P TY ++++S+V+ G ++A + M
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+ + Y +I G + G + A + + G + ++ +LI A K G +
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+E + +++MK S PDV N+++ + + G++ +A + + G T + ++ T+
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATM 730
Query: 764 DYL 766
YL
Sbjct: 731 MYL 733
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ ++ F G + A + F + E GV S++ ++ K G EA + +M +
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+A N ++ +G A +I + L++ G D++ + T++ G +DE
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFN-ALREKGTCDVISFATMMYLYKGMGMLDE 742
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
+ E+M+ SG+ D ++N ++ ++ G L + + ML
Sbjct: 743 AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/525 (20%), Positives = 205/525 (39%), Gaps = 64/525 (12%)
Query: 300 AHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEA 359
+H P+ FT+ L++ C K + + Q+ GF +L+ + K +V++A
Sbjct: 26 SHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA 85
Query: 360 CQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQ 419
++ ++M + G+ + N + GL++NG A+ +F D + G ++ +T + ++
Sbjct: 86 LKVLDEMPERGIA----SVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVL-- 139
Query: 420 XXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK 479
GF +++ TSL+ + G W R+ + V +V
Sbjct: 140 -GGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTY 198
Query: 480 VLRWKAGMEASIKNPPSKKKDYSPMFPSK--GDFSEIMSILTGSQDANLDS----HDTKI 533
ME + N + F S+ D + + +I + NL H +
Sbjct: 199 NAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM 258
Query: 534 EDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFL 593
+ E E + + + ++ + A +FT D+ ++ N+ +S +
Sbjct: 259 KKEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL---------KDTRNLISWNSVISGMM 309
Query: 594 AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM---------- 643
G+ A +LFE G+ P S T+NS++S F + G EA+ M
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 644 -----------------GEKL--------CPADIATYNMIIQGLGKIGRADLASAILDRL 678
G+++ DI +I K G + A I DR
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+ D V +N +I+ GK G + + FE ++ + P + T+ ++ S G +
Sbjct: 430 EPKPK--DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNV 487
Query: 739 KDAYKFLKMMLDA-GCTPN--HVTDTTLDYLGREIDKLRYQKASI 780
+ + ++M + G P+ H+ +D LGR +LR K I
Sbjct: 488 EKGSQIFRLMQEEYGYKPSTEHI-GCMIDLLGRS-GRLREAKEVI 530
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
VF +L D + L +W N I G T+ LF ++ PD T+N LIS
Sbjct: 288 VFTELKDTRN--LISW--NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
+LGKV +A +E + + P T+L+ C + + + I +
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
V SL+D+ K S A ++F++ E +N++I G K+G E+A +F
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRF--EPKPKDPVFWNVMISGYGKHGECESAIEIFEL 461
Query: 401 LKKK 404
L+++
Sbjct: 462 LREE 465
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S S NS+ +L D++ Q H L K GF ++ + + + G+
Sbjct: 126 SGSGMNSVTVASVLGGC--GDIEGGMQ--LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV 181
Query: 257 TSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNA-CAHQPDHFTYTTLIQGC 315
+ +F ++P + TYN IS L + G + V+ + + +P+ T+ I C
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
+ + ++ + F+ T+V +L+D+ K A +F ++ +
Sbjct: 242 ASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD---TRNL 298
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++N +I G++ NG+ E A LF L +G D T++ ++
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLI 340
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/523 (19%), Positives = 198/523 (37%), Gaps = 34/523 (6%)
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQM------PGPDL-CTYNCLISVLCKLGKVKDALI 291
+GY I+ G+ + +L ++ G DL ++ C K+K A
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAES 304
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
V ++ D + +I CK + A ++M G + ++ + +L
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
K EA + F++ + YN+ L K GR E A+ L ++K +G D I
Sbjct: 365 KMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI 424
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
Y+ ++ G DL+T L+ G+ ++G + + + +
Sbjct: 425 NYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 472 REGDLVPKVLRWKAGMEA-SIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHD 530
+ P + +E + +D+ K ++ S + G +A L
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK-ASFVKGYCEAGLSKKA 543
Query: 531 TKIEDEEGDEWSLSPHMDKLANQVKSSGY---ASQLFTPTPGQRVQQKGSDSFDIDMVNT 587
K S ++ KL + GY A + RV+ S M
Sbjct: 544 YKAFVRLEYPLRKSVYI-KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS------MCGK 596
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
+ F + A LF+ E G+ P +TY ++ ++ + +A ++ +M ++
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 648 CPADIATYNMIIQGL--------------GKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
D+ TY +++ G++G+ AS +L G LD+V Y L
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK-ASEVLREFSAAGIGLDVVCYTVL 715
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
I+ K +++ + F++M SG+ PD+V Y TLI + + G
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + +L K DM LE + F + D F LD YN+ A G + +F L
Sbjct: 352 NCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIF-LDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+M PD+ Y LI C GKV DAL + +++ PD TY L+ G +
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE--GVKASC 375
+ I+ +M G +P + + +++ L A KV EA F + Q+ KAS
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKAS- 529
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLK 402
+ G + G + AY F L+
Sbjct: 530 -----FVKGYCEAGLSKKAYKAFVRLE 551
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 217 DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCL 276
+MK++ + M++ GF LD + I + +L + +M G L NC+
Sbjct: 296 EMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGL-KVNCV 354
Query: 277 ISVL-----CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
I L CK+ +AL +++ D Y K +++ A + +M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
+ G P I Y +L+D KV +A L ++M G+ TYN+L+ GL +NG
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIV 417
E ++ +K +G + +T S+I+
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVII 500
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A + F+ F + + YN + K G EA+ ++ EM ++ D+ Y +I
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
G G+ A ++D ++ G D++ YN L++ L + G +EV + +E+MK+ G P
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ VT + +IE A +K+A F L+ C N +
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFS-SLEQKCPENKAS 529
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 28/219 (12%)
Query: 215 KADMKLEF---QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC 271
KA ++LE+ + V+ KL F+L GY H D+ S + PG +C
Sbjct: 545 KAFVRLEYPLRKSVYIKLF----FSLCIEGYLEKAH------DVLKKMSAYRVEPGRSMC 594
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
+I CKL V++A ++++ + PD FTYT +I C+ ++ A +F M
Sbjct: 595 GK--MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 332 HNNGFRPGTIVYNSLLDVLFK-------------ATKVSEACQLFEKMAQEGVKASCQTY 378
G +P + Y LLD K +A ++ + + G+ Y
Sbjct: 653 KQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCY 712
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+LI K E A LF + G D + Y+ ++
Sbjct: 713 TVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%)
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D YN+ L K+GR + A +L + +G D++ Y TLI+ G++ +
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++M +G++PD++TYN L+ ++ G ++ + + M G PN VT++ +
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/534 (19%), Positives = 218/534 (40%), Gaps = 52/534 (9%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
LF +M + + +IS K + AL ++E++ A P+ FT++++++ C
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
I + R+ + GF ++V +SL D+ K + EAC+LF + A ++ +
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN----ADTISWTM 195
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
+I L+ + A + ++ K G + T+ + +L RG
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTF-VKLLGASSFLGLEFGKTIHSNIIVRG 254
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
+++V TSL+ + + + R++ E D V W + + ++N +K+
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD----VFLWTSVVSGFVRNLRAKEAV 310
Query: 501 YS-------PMFPSKGDFSEIMSILTGSQDAN----LDSHDTKIEDEEGDEWS---LSPH 546
+ + P+ +S I+S+ + + + + S K+ E+ + + +
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 547 MDKLANQVKSSGYASQLFTPTP--------GQRVQQKGSDSFDIDM----------VNTF 588
M A++V++S + +P G D F + M V T
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 589 LSIFLAKGKLSLACKLFEI---FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ A KL ++ EI VD NS++ ++ + AW +I M
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ D TY ++ ++G+ ++A ++++ + G +D + I+A G ++
Sbjct: 491 R----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
SG + N+L++++SK G L+DA K + + TP+ V+
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVS 596
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
LE + H K GF+ N + + G L + +F ++ PD+ ++N L+S
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN-NGFRP 338
L G + AL +E++ +PD T+ L+ C D F M P
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKM 366
Y L+ +L +A ++ EA + E M
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETM 691
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
++D+ N LS++L + A KLF+ + V + + ++S+F K F A ++
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV----FAWTVMISAFTKSQEFASALSLF 112
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM + T++ +++ + + ++K G + V+ ++L + K
Sbjct: 113 EEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKC 172
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G+ E + F ++ N D +++ +I A ++A +F M+ AG PN T
Sbjct: 173 GQFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 761 TTL----DYLGREIDK 772
L +LG E K
Sbjct: 229 VKLLGASSFLGLEFGK 244
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 243 NICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ 302
N + A+ + ++++ M D TY L++ +LGK + AL V + +
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIR 525
Query: 303 PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL 362
D + I ++ + +GF V NSL+D+ K + +A ++
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 363 FEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
FE++A V ++N L+ GL NG +A + F +++ K D +T+ I++
Sbjct: 586 FEEIATPDV----VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILL 636
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PG 267
A R D + LM G D +I + + G + + L ++
Sbjct: 132 ACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSP 191
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH----QPDHFTYTTLIQGCCKTYKIDH 323
PD TYN L+ LCK KD +V+E ++ +PD ++T LI C + +
Sbjct: 192 PDTYTYNFLLKHLCK---CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE 248
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A + +++ N GF+P +YN+++ +K SEA +++KM +EGV+ TYN LI
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
GL K GR E A + G D TY+ ++
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 577 SDSFDIDMVNTFLSI--FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
++ + D V T +++ G++ A L + TE P +YTYN ++ K +
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 635 EAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+ + EM + D+ ++ ++I + A ++ +L G D +YNT+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
+ + E +++MK G+ PD +TYNTLI SKAG +++A +LK M+DAG
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 754 TPNHVTDTTL 763
P+ T T+L
Sbjct: 332 EPDTATYTSL 341
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCK 282
K + +K DT+ YN + DL + +M PDL ++ LI +C
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
+++A+ + L +PD F Y T+++G C K A ++ +M G P I
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
YN+L+ L KA +V EA + M G + TY L++G+ + G
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD T + + LC+ G+V +A + ++L PD +TY L++ CK +
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 328 FNQMHNN-GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
++M ++ +P + + L+D + + + EA L K+ G K C YN ++ G
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+ A ++ +K++G D ITY+ ++ G+ D
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 447 TITSLMVGIHKHG 459
T TSLM G+ + G
Sbjct: 337 TYTSLMNGMCRKG 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
E+ + V P ++ ++ + EA +++++G D YN I++G +
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
+ A + ++ ++G D + YNTLI L KAGR++E + + M +G PD TY
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 726 NTLIEVHSKAG 736
+L+ + G
Sbjct: 339 TSLMNGMCRKG 349
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
D +NT + LA+G+ A + + E + P YN+++ K +EA ++
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
++ + AD TY +II GL + D+A D ++ G D +Y + L +
Sbjct: 542 FGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQ 601
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+G + + F + SG P+VV YNT+I S++GL ++AY+ L+ M G P+ VT
Sbjct: 602 SGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Query: 760 DTTLDYLGREID 771
LD L +D
Sbjct: 662 WRILDKLHDSMD 673
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 12/266 (4%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSF-----SLFHQMPGPDLCTYNCLISVLCK 282
+LM +K A T YNI + C D T S+ PD T N +I+ LCK
Sbjct: 401 ELMLRKEGADRTRIYNIYLRGL-CVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 283 LGKVKDALIVWEDLNA---CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ-MHNNGFRP 338
+G+V DA+ V +D+ CA PD T T++ G + + A + N+ M N +P
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCA--PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
G + YN+++ LFK K EA +F ++ + V A TY I+I GL + + A +
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
D+ D Y+ + G + ++V +++ +
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRS 637
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWK 484
G ++++ +R+ P + W+
Sbjct: 638 GLKREAYQILEEMRKNGQAPDAVTWR 663
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 5/227 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L + + N ++ L K + +V +M K A D N + G
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 255 LATSFSLFHQ-MP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+ + ++ MP P + YN +I L KL K +A+ V+ L + D TY
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYA 558
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+I G C T K+D A + ++ + R VY + L L ++ +S+AC +A
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADS 618
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
G + YN +I ++G AY + +++K GQ D +T+ I+
Sbjct: 619 GAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 173/447 (38%), Gaps = 34/447 (7%)
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A RI + + G+RP ++ +S++ L A + EA + F G +T N++
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 382 IHGLIKNGRPEAAYTLFCDLKK-KGQFVDGIT-YSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I L+ + P + + L K +FV +T Y+ ++ Q R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK 499
G + D+VT T+L+ G + + ++ +R + P L +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI------------ 239
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGY 559
G F ++ + TG + L + E D + L + + GY
Sbjct: 240 ---------GGFLKMRDVETGRK---LMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287
Query: 560 ASQLFTPTPGQRVQQKGSDSFDID-MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
+ +F + + + F M+++ G A ++ I G+ P
Sbjct: 288 FNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHG----AARIVYIMKSKGLKPRRT 343
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+YN+I+ K G A+ ++ E E + P++ TY ++++ L K A +L+
Sbjct: 344 SYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY-TYKLLMESLCKELDTGKARNVLEL 402
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+L++ G +YN + L E+ M PD T NT+I K G
Sbjct: 403 MLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGR 462
Query: 738 LKDAYKFL-KMMLDAGCTPNHVTDTTL 763
+ DA K L MM C P+ VT T+
Sbjct: 463 VDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASA 673
P YT N++++ K G ++A ++ +M K C D T N ++ GL GRA+ A
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 674 ILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE-- 730
+L+R++ + +V YN +I L K + DE F Q++ + + D TY +I+
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 731 --------------------------VHS-------KAGLLKDAYKFLKMMLDAGCTPNH 757
V++ ++G L DA FL + D+G PN
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 758 VTDTTL 763
V T+
Sbjct: 625 VCYNTV 630
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG------PDLCTYNCLISVLCKLGKVK 287
GF D N+ I ++ + H++ G P L YN L++ LC + +V
Sbjct: 120 GFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVI 179
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
DA + D+ H PD T+TTLI G C+ +++ A ++F++M G RP ++ + L+
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 348 DVLFKATKVSEACQLFEKM 366
K V +L +++
Sbjct: 240 GGFLKMRDVETGRKLMKEL 258
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 142/395 (35%), Gaps = 73/395 (18%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P +YN +I LCK G A + E+ + P +TY L++ CK A +
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
M T +YN L L +E + M Q + T N +I+GL K
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
GR + A + D+ G+F D VT
Sbjct: 460 MGRVDDAMKVLDDM-MTGKFC---------------------------------APDAVT 485
Query: 448 ITSLMVGIHKHGRWDWT-DRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFP 506
+ ++M G+ GR + D L + + E + P V+ + A + K
Sbjct: 486 LNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK-------------L 532
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA--NQVK-SSGYASQL 563
KGD E MS+ + A++ + D + + +D L N+V + + +
Sbjct: 533 HKGD--EAMSVFGQLEKASVTA----------DSTTYAIIIDGLCVTNKVDMAKKFWDDV 580
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
P S D + FL G LS AC ++G P YN++
Sbjct: 581 IWP----------SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 624 MSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
++ + G EA+ I+ EM + D T+ ++
Sbjct: 631 IAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
S ++ + N + +F L + KLF+ E G+ P + T+ +I+S + G A
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+M C D T +I G+ G D+A ++ DR + +D V ++TLI G
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
+G D +E+MK+ G+ P++V YN LI+ +A A K ++ G TPN
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW- 350
Query: 759 TDTTLDYLGREIDKLRY 775
+T L R + RY
Sbjct: 351 --STYAALVRAYGRARY 365
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
YN+ + F DL S LF +M PD T+ +IS + G K A+ +E ++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
+ +PD+ T +I + +D A ++++ +R + +++L+ + +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++E+M GVK + YN LI + + RP A ++ DL G + TY+ +V
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 133/341 (39%), Gaps = 8/341 (2%)
Query: 144 HLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXX-XAALDSNSNSN 202
++ P PL+ N+LL +++ + + +++ +K+ L+ +
Sbjct: 151 NMTNPETAPLVLNNLL-ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPD 209
Query: 203 SIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
+ F ++ R+ + + F K M G D I A+G G++ + SL+
Sbjct: 210 NATFTTIISCARQNGVPKRAVEWFEK-MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLY 268
Query: 263 HQMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
+ D T++ LI + G L ++E++ A +P+ Y LI +
Sbjct: 269 DRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+ A I+ + NGF P Y +L+ +A +A ++ +M ++G+ + Y
Sbjct: 329 KRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILY 388
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKK-KGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
N L+ N + A+ +F D+K + D T+S ++
Sbjct: 389 NTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
GF L +TS++ K + D R V E + P
Sbjct: 449 EAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGC--WGDLATSF 259
N + +N+L+ ++ +A + + ++ L+ GF + Y + A+G +GD A
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYGDDA--L 370
Query: 260 SLFHQMPGPDLCT----YNCLISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQG 314
+++ +M L YN L+S+ V +A +++D+ C PD +T+++LI
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
+ ++ A QM GF P V S++ KA +V + + F+++ + G+
Sbjct: 431 YACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKK---GQFV 408
+ L++ + + E + C K K GQ V
Sbjct: 491 DRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVV 527
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G P TY +++ ++ + Y ++A AI EM EK + YN ++ D A
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 672 SAILDRLLK-QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
I + + D +++LI +GR+ E QM+ +G P + ++I+
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Query: 731 VHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ KA + D + +L+ G TP+
Sbjct: 465 CYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT---YNSIMSSFVKKGYFNEAWAIITE 642
+T+ ++ A G+ I+ E +S T YN+++S Y +EA+ I +
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 643 MGE-KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
M + C D T++ +I GR A A L ++ + G + + ++I GKA
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 702 RIDEVNKFFEQMKSSGINPD 721
++D+V + F+Q+ GI PD
Sbjct: 471 QVDDVVRTFDQVLELGITPD 490
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G + +A L++ + T+++++ + G ++ I EM ++ Y
Sbjct: 259 GNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIY 318
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N +I +G+ R A I L+ G + Y L+ A G+A D+ + +MK
Sbjct: 319 NRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKE 378
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA-GCTPNHVTDTTL 763
G++ V+ YNTL+ + + + +A++ + M + C P+ T ++L
Sbjct: 379 KGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSL 427
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 221/523 (42%), Gaps = 64/523 (12%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCK---LGKVKDALIVWEDLNA 298
YN I + G+ + LF +MP DL ++N +I + LGK ++ + + +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV 157
Query: 299 CAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSE 358
C ++ T++ G + +D A +F++M + +N+LL + +K+ E
Sbjct: 158 C-------SWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEE 206
Query: 359 ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
AC LF+ + ++N L+ G +K + A F + + D ++++ I+
Sbjct: 207 ACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIIT 258
Query: 419 QXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVRE-GDLV 477
V D+ T T+++ G + +R+++ RE D +
Sbjct: 259 GYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQ-------NRMVEEARELFDKM 307
Query: 478 PKV--LRWKAGMEASIKNPPSK-KKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIE 534
P+ + W A + ++ + K+ + P + + S +++TG S +
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLF 366
Query: 535 DEEGDEWSLSPHMDKLANQVKSSGY--------ASQLFTPTPGQRVQQKGSDSFDIDMVN 586
D+ P D ++ +GY A +LF +++++G + +
Sbjct: 367 DK-------MPKRDPVSWAAMIAGYSQSGHSFEALRLFV-----QMEREGG-RLNRSSFS 413
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
+ LS L L +L + G + + N+++ + K G EA + EM K
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
DI ++N +I G + G ++A + + ++G D +++A G +D+
Sbjct: 474 ----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 707 NKFFEQM-KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
++F M + G+ P+ Y ++++ +AGLL+DA+ +K M
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/301 (18%), Positives = 126/301 (41%), Gaps = 27/301 (8%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
S+N LL + E Q D + R ++ +N+++ ++ I A +F
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS-------WNTIITGYAQSGKIDEARQLF 273
Query: 176 -----------LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQ 224
++ + D N +++N +L + + ++E +
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGE-RMEMAK 332
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLG 284
+M + + TW N I + G ++ + +LF +MP D ++ +I+ + G
Sbjct: 333 ELFDVMPCRN--VSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+AL ++ + + + ++++ + C ++ ++ ++ G+ G V N
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+LL + K + EA LF++MA + + ++N +I G ++G E A F +K++
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDI----VSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 405 G 405
G
Sbjct: 505 G 505
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 131/304 (43%), Gaps = 47/304 (15%)
Query: 104 SIKQDAVVLHPQSFNPLLHSLIISH---NFHE----TLQILDYIQQRHLLQPGCTPLIYN 156
++ + A LH S N L +H NFH T + Q + LL+ G + +
Sbjct: 8 ALSRRAQQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEW 67
Query: 157 SLLIAS-LRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVA-LR 214
++ I+S +R A +F ++ +S+++N ++ LR
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRW--------------------SSVSYNGMISGYLR 107
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYN 274
+ +L +++F ++ ++ D +N+ I + +L + LF MP D+C++N
Sbjct: 108 NGEFELA-RKLFDEMPER-----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWN 161
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
++S + G V DA V++ + + + ++ L+ + K++ A +F N
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
+ +N LL K K+ EA Q F+ M V ++N +I G ++G+ + A
Sbjct: 218 AL----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEA 269
Query: 395 YTLF 398
LF
Sbjct: 270 RQLF 273
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ YN +++ K G + AL ++ + +PD T+ LI G C++ K D A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +M G P + +N+L+ + K+ E ++ +M + G + S T IL+ GL +
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
GR + A L DL K Y +V + +G +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
T+L+ G+ K GR + M+ + ++P
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 122/315 (38%), Gaps = 42/315 (13%)
Query: 214 RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPD 269
RK D L +L+D K + YN ++ + GD+ + + +M PD
Sbjct: 171 RKMDYALLAFDTMKRLIDGKP---NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPD 227
Query: 270 LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
+CT+N LI+ C+ K AL ++ ++ +P+ ++ TLI+G + KI+ ++
Sbjct: 228 VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAY 287
Query: 330 QMHNNGFR-----------------------------------PGTIVYNSLLDVLFKAT 354
+M G R P Y SL++ L
Sbjct: 288 EMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGEN 347
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
K A ++ E++ ++G L+ GL K+GR E A + G D +T++
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 415 IIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREG 474
+++ +G+ D T L+ G K GR + L+ + +
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 475 DLVPKVLRWKAGMEA 489
D++P + + M+
Sbjct: 468 DMLPDIFTYNRLMDG 482
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 35/214 (16%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ N ++ + K LA LF E G +P ++N+++ F+ G E +
Sbjct: 227 DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAI-------------------------- 674
EM E C AT +++ GL + GR D A +
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGE 346
Query: 675 ---------LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
++ L K+G + TL+ L K+GR ++ + F E+M ++GI PD VT+
Sbjct: 347 NKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTF 406
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
N L+ + DA + + G P+ T
Sbjct: 407 NLLLRDLCSSDHSTDANRLRLLASSKGYEPDETT 440
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 148/368 (40%), Gaps = 47/368 (12%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHN--NGFRPGTIVYNSLLDVLFKATKVSEACQLFEK 365
+ + I C+ K+D+A F+ M +G +P VYN++++ K+ + +A + +++
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 366 MAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXX 425
M +E K T+NILI+G ++ + + A LF ++K+KG + ++++ ++
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 426 XXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
G T L+ G+ + GR D L+ DL+ K +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL-----DLLNKRV---- 329
Query: 486 GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDE----- 540
PS+ D+ ++ L G A + ++G
Sbjct: 330 -------------------LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 541 -WSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLS 599
+L + K K+SG+ ++ D N L + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMN----------AGILPDSVTFNLLLRDLCSSDHST 420
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
A +L + + G +P TY+ ++S F K+G E ++ EM +K DI TYN ++
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Query: 660 QGLGKIGR 667
GL G+
Sbjct: 481 DGLSCTGK 488
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
++ YN ++ G K G D A R+ K+ D+ +N LIN ++ + D F
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGRE 769
+MK G P+VV++NTLI +G +++ K M++ GC + T + +D L RE
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCRE 311
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 4/236 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP--GPDLCTYNC--LISVLCKLGK 285
M +KG + +N I F G + + ++M G C L+ LC+ G+
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V DA + DL P F Y +L++ C K A + ++ G P I +
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ L K+ + +A EKM G+ T+N+L+ L + A L KG
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRW 461
D TY ++V + + D+ T LM G+ G++
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
++ + NT ++ ++ G + A + ++ + P T+N +++ + + F+ A +
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM EK C ++ ++N +I+G G+ + + +++ G L++ L +
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCRE 311
Query: 701 GRIDE--------VNK---------------------------FFEQMKSSGINPDVVTY 725
GR+D+ +NK E++ G P +
Sbjct: 312 GRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIAC 371
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
TL+E K+G + A F++ M++AG P+ VT
Sbjct: 372 TTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVT 405
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P YN++++ +VK G ++A MG++ D+ T+N++I G + + DLA +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ ++G ++V +NTLI +G+I+E K +M G T L++ +
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKL 773
G + DA + +L+ P+ DY G ++KL
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSE-----FDY-GSLVEKL 343
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQ-GGYLDIVMYNTLINALGKAGRIDEV 706
CP + I + + D A D + + G ++ +YNT++N K+G +D+
Sbjct: 153 CPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKA 212
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+F+++M PDV T+N LI + ++ A + M + GC PN V+ TL
Sbjct: 213 LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ F L+ L K E ++ H ++ G Y I A G+L+ +F L
Sbjct: 186 TGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Query: 262 ----FHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ D Y+ LIS L K G+ + ++ E+++ +PD TY LI G C
Sbjct: 246 KDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A R+ ++M G +P I YN +L V F+ K EA LFE M + G +
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKG 405
Y I+ GL + + E A + ++ KG
Sbjct: 366 YRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+LS A KL + E + + Y++++SS +K G NE I+ EM EK C D TY
Sbjct: 237 GELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N++I G ++ A+ +LD ++++G D++ YN ++ + + +E FE M
Sbjct: 297 NVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR 356
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
G +PD ++Y + + + ++A L ML G P
Sbjct: 357 RGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRR 398
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVW 293
D YNI IH G + LF +M P T+ LI LCK +VK+AL +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 294 ED-LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
D L +P Y +LI+ C+ ++ A ++ ++ + + +Y++L+ L K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
A + +E + E+M+++G K TYN+LI+G E+A + ++ +KG D I+
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 413 YSIIV 417
Y++I+
Sbjct: 331 YNMIL 335
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
GV P + Y S++ + + G + A+ + E E D A Y+ +I L K GR++
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
S IL+ + ++G D V YN LIN + N+ ++M G+ PDV++YN ++ V
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ ++A + M GC+P+ ++
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMII 659
A KLF+ + V P T+ +++ K EA + +M + + Y +I
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
+ L +IG A + D + +D +Y+TLI++L KAGR +EV+ E+M G
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
PD VTYN LI + A + L M++ G P+ ++
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + Y LI LC++G++ A + ++ + D Y+TLI K + + + I
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M G +P T+ YN L++ A ++ ++M ++G+K +YN+++ +
Sbjct: 281 LEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFR 340
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+ E A LF D+ ++G D ++Y I+
Sbjct: 341 IKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P + TYN ++ + G F++A + EM +K T+ +I GL K R A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 675 LDRLLKQGGYLDIV-MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+LK G V +Y +LI AL + G + K ++ I D Y+TLI
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
KAG + L+ M + GC P+ VT L
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVL 299
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+G D + +T +S + G+ + + E +E G P + TYN +++ F +
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
A ++ EM EK D+ +YNMI+ +I + + A+ + + + ++G D + Y +
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINP 720
+ L + + +E ++M G P
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 114/302 (37%), Gaps = 51/302 (16%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
+F L+H L E L++ + + + ++P T IY SL+ A + + AF +
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP--TVHIYASLIKALCQIGELSFAFKL- 245
Query: 176 LKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF 235
A + ++ ++ L+ +L KA E + ++ +K
Sbjct: 246 ---------------KDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK--- 287
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWED 295
GC PD TYN LI+ C + A V ++
Sbjct: 288 --------------GC---------------KPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 296 LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK 355
+ +PD +Y ++ + K + AT +F M G P T+ Y + D L + +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSI 415
EA + ++M +G K + L ++G+ E + L +G D +S+
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSV 437
Query: 416 IV 417
++
Sbjct: 438 MI 439
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 190/489 (38%), Gaps = 94/489 (19%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK-VSEACQLFEKM 366
Y I G + + D A ++ M P + L+ L KA + E ++FEKM
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
+++GVK S + GL+K+ FCD +G+ +V+Q
Sbjct: 336 SEKGVKWSQDVFG----GLVKS---------FCD--------EGLKEEALVIQTEMEK-- 372
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
+G + + +LM +K + + L +R+ L P +
Sbjct: 373 ------------KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPH 546
M+A + M P D E ++L +D L E + S +
Sbjct: 421 MDAYARR----------MQP---DIVE--TLLREMEDLGL----------EPNVKSYTCL 455
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKG----SDSFDIDMVNTFLSIFLAKGKLSLAC 602
+ K S A+ F R+++ G S S+ + + G A
Sbjct: 456 ISAYGRTKKMSDMAADAFL-----RMKKVGLKPSSHSY-----TALIHAYSVSGWHEKAY 505
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKG---YFNEAWAIITEMGEKLCPADIATYNMII 659
FE + G+ P TY S++ +F + G E W ++ + EK+ I TYN ++
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM--LREKIKGTRI-TYNTLL 562
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
G K G A ++ K G ++ YN L+NA + G+ ++ + ++M + +
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRY---Q 776
PD +TY+T+I + K A+ + KMM+ +G P+ R +KLR
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDP----------RSYEKLRAILED 672
Query: 777 KASILNEKD 785
KA N KD
Sbjct: 673 KAKTKNRKD 681
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 148/381 (38%), Gaps = 31/381 (8%)
Query: 63 LHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLH 122
L+F+ W S SP A S++ L R ++ + +N +
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAIS 281
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRN--NHIPLAFSIFLKLIE 180
L S + + ++ + + + ++ T I LI +LR + IF K+ E
Sbjct: 282 GLSASQRYDDAWEVYEAMDKINVYPDNVTCAI----LITTLRKAGRSAKEVWEIFEKMSE 337
Query: 181 ------------LFXXXXXXXXXXAAL-------DSNSNSNSIAFNQLLVALRKADMKLE 221
L AL SN+I +N L+ A K++ E
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 222 FQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLI 277
+ +F ++ DK G YNI + A+ +L +M P++ +Y CLI
Sbjct: 398 VEGLFTEMRDK-GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI 456
Query: 278 SVLCKLGKVKD-ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
S + K+ D A + + +P +YT LI + + A F +M G
Sbjct: 457 SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT 396
+P Y S+LD ++ + ++++ M +E +K + TYN L+ G K G A
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARD 576
Query: 397 LFCDLKKKGQFVDGITYSIIV 417
+ + K G +TY++++
Sbjct: 577 VVSEFSKMGLQPSVMTYNMLM 597
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY-FNEAWAI 639
D+ + N +S A + A +++E + V P + T ++++ K G E W I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+M EK + +++ G + A I + K+G + ++YNTL++A K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ I+EV F +M+ G+ P TYN L++ +++ L+ M D G PN +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 760 DTTL 763
T L
Sbjct: 452 YTCL 455
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M K G + Y IHA+ G +++ F +M P + TY ++ + G
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ +W+ + + TY TL+ G K A + ++ G +P + YN
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNM 595
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L++ + + ++ QL ++MA +K TY+ +I+ ++ + A+ + K G
Sbjct: 596 LMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Query: 406 QFVDGITY 413
Q D +Y
Sbjct: 656 QVPDPRSY 663
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
+D + +A N +L L ++ K + ++FH +M KG + Y I I F
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ T+ F M PD Y CLI+ K+ + +++ H PD TY
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI+ +HATRI+N+M N P +N ++ F A ++E+M ++G
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
+ +Y +LI GLI G+ A ++ KG I Y+
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+S +N ++ L K V ++ K ++T + I + AF + + +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMKAFAAAKERKKAVGI 251
Query: 262 FHQMPGPD----LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F M + T NCL+ L + K+A ++++ L P+ TYT L+ G C+
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCR 310
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A RI+N M + G +P + +N +L+ L ++ K S+A +LF M +G + ++
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y I+I K E A F D+ G D Y+ ++
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 113/275 (41%), Gaps = 5/275 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + LL + +E ++++ ++D+ G D +N+ + + + L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 262 FHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
FH M P P++ +Y +I CK ++ A+ ++D+ QPD YT LI G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+D + +M G P YN+L+ ++ A +++ KM Q ++ S T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N+++ E ++ ++ KKG D +Y++++
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
+G L+ H+ G+ + + L + +
Sbjct: 536 DKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ TY L++ C++ + +A +W D+ +PD + +++G ++ K A ++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F+ M + G P Y ++ K + + A + F+ M G++ Y LI G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ + Y L ++++KG DG TY+ ++
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F + + A + F+ ++G+ P + Y +++ F + + + ++ EM EK P D
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TYN +I+ + + A+ I +++++ I +N ++ + A + +E
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWE 497
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+M GI PD +Y LI G ++A ++L+ MLD G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 19/396 (4%)
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
GF + YNS++ +L K + + E+M +G+ + +T+ I +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+ A +F +L KK +F G+ +L F +++T T L
Sbjct: 246 KKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF---PSK 508
+ G + R+ + + L P ++ +E +++ KK D +F SK
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS--RKKSDAIKLFHVMKSK 362
Query: 509 GDFSEIMSILTGSQD-ANLDSHDTKIE--DEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
G + S +D S +T IE D+ D L P D +G+ +Q
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQP--DAAVYTCLITGFGTQKKL 419
Query: 566 PTPGQ---RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
T + +Q+KG D N + + + A +++ + ++P +T+N
Sbjct: 420 DTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 623 IMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
IM S+ + A+ EM +K +CP D +Y ++I+GL G++ A L+ +L +
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDD-NSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
G ++ YN + G+ + + ++ K SG
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
+ F ++D G D Y I FG L T + L +M PD TYN LI +
Sbjct: 389 EYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
+ + A ++ + +P T+ +++ + ++ +M G P
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
Y L+ L K EAC+ E+M +G+K YN + G+PE +F
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----IFE 563
Query: 400 DLKKKGQF 407
+L ++ +F
Sbjct: 564 ELAQRAKF 571
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N L L K S A KLF + G P +Y ++ F K+ A
Sbjct: 332 DIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + D A Y +I G G + D +L + ++G D YN LI +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
+ + + +M + I P + T+N +++ + A + + M+ G P+ +
Sbjct: 452 KMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
Query: 761 TTL 763
T L
Sbjct: 512 TVL 514
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
L K L KL E FT P TY +++ + + EA I +M ++ DI
Sbjct: 279 LGKEAQVLFDKLKERFT-----PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDI 333
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+N++++GL + + A + + +G ++ Y +I K ++ ++F+
Sbjct: 334 VAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M SG+ PD Y LI L Y+ LK M + G P+ T L
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMII 659
A +++ + G+ P +N ++ ++ ++A + M K CP ++ +Y ++I
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP-NVRSYTIMI 375
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
+ K + A D ++ G D +Y LI G ++D V + ++M+ G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
PD TYN LI++ + + + A + M+ P+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 164/455 (36%), Gaps = 35/455 (7%)
Query: 264 QMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
+ PG N ++ LCK ++ A + D PD TY TLI+G + ID
Sbjct: 7 KFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDE 66
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A + +M G P YNSL+ K ++ QLF++M G+ +YN L+
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
K GR A+ + + V GI I+L
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP 186
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSP 503
+L+T L+ G+ K R D +M+ +++ P + + ++ K +K
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 504 MFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL 563
+ K + T AN I+ +E H
Sbjct: 247 LKMKKEGY-------TFDGFANCAVVSALIKTGRAEEAYECMH----------------- 282
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
+ + G+ S DI NT L+++ G L L E G+ P YT+ I
Sbjct: 283 -------ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 624 MSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGG 683
++ + G A + +GE + T N +I GL K G D A RL
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM----RLFASME 391
Query: 684 YLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
D Y ++++ L K GR+ +K + G+
Sbjct: 392 VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 138/335 (41%), Gaps = 22/335 (6%)
Query: 139 YIQQRHLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALD 196
Y R + + G P + YNSL+ + +N + +F ++ L
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM----------------LH 111
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S + + ++N L+ K E ++ H+ + G YNI + A G
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 257 TSFSLFHQMPG---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+ LF + P+L TYN LI+ LCK +V + +L + P+ TYTT+++
Sbjct: 172 NAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
KT +I+ ++F +M G+ +++ L K + EA + ++ + G ++
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 374 S-CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
+YN L++ K+G +A L +++ KG D T++IIV
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKH 351
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRL 467
G +VT L+ G+ K G D RL
Sbjct: 352 LACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+R+++ G + D+ N+ +S L+ +LF+ +G+ P ++YN++MS + K
Sbjct: 72 RRMREAGIEP-DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 630 KGYFNEAWAIITE--MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
G EA+ I+ E L P I TYN+++ L K G D A + L K ++
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPG-IDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPEL 188
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYK-FLK 746
+ YN LIN L K+ R+ V+ ++K SG P+ VTY T+++++ K ++ + FLK
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 747 M 747
M
Sbjct: 249 M 249
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
EAG++P TYNS++S K N + EM D+ +YN ++ K+GR
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 670 LASAILDRLLKQGGYL-DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A IL + G + I YN L++AL K+G D + F+ +KS + P+++TYN L
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNIL 194
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
I K+ + ++ + +G TPN VT TT+
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
GV P TYN+++ + + +EA+A+ M E D+ TYN +I G K +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF-EQMKSSGINPDVVTYNTLIE 730
+ D +L G D+ YNTL++ K GR E K E + +G+ P + TYN L++
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 731 VHSKAGLLKDAYKFLK--------------MMLDAGCTPNHVTDTTLDYLGREIDKLRYQ 776
K+G +A + K ++++ C V ++D++ RE+ K Y
Sbjct: 163 ALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRV--GSVDWMMRELKKSGYT 220
Query: 777 KASI 780
++
Sbjct: 221 PNAV 224
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 10/214 (4%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S N++ + +L K + Q+F K M K+G+ D + + A G
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK-MKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 257 TSFSLFHQM-----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
++ H++ D+ +YN L+++ K G + + E++ +PD +T+T +
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
+ G A + + G +P + N L+D L KA V A +LF M
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDE 395
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
TY ++H L K+GR A L KG
Sbjct: 396 ----FTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 586 NTFLSIFLAKGKLSLACK-LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
NT +S + G+ A K L E AG+ P TYN ++ + K G+ + A + +
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
++ P ++ TYN++I GL K R ++ L K G + V Y T++ K RI+
Sbjct: 182 SRVKP-ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIE 240
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+ + F +MK G D ++ K G ++AY+ + ++ +G
Sbjct: 241 KGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
++G P + TY +++ + K + + +M ++ D ++ L K GRA+
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 670 LASAILDRLLKQGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A + L++ G DIV YNTL+N K G +D V+ E+++ G+ PD T+ +
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 729 IEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ G A K L + + G P+ VT
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N+ + L K + A +L ++ G D++ YNTLI + IDE +M+
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+GI PDV TYN+LI +K +L + ML +G +P+ + TL
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 24/205 (11%)
Query: 547 MDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE 606
+D + ++K SGY T T T L ++ ++ +LF
Sbjct: 207 VDWMMRELKKSGYTPNAVTYT-------------------TMLKMYFKTKRIEKGLQLFL 247
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM---GEKLCPADIATYNMIIQGLG 663
+ G + +++S+ +K G EA+ + E+ G + DI +YN ++
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR--SQDIVSYNTLLNLYF 305
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
K G D +L+ + +G D + ++N L G K + G+ P VV
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMM 748
T N LI+ KAG + A + M
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASM 390
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNC 275
AD++L + H ++ + GF + N +H + GD+A+++ +F +MP DL +N
Sbjct: 135 ADVRL--GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 192
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
+I+ + GK ++AL ++ ++N+ +PD FT +L+ C K + R+ M G
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
N LLD+ + +V EA LF++M V + ++ LI GL NG + A
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 396 TLF 398
LF
Sbjct: 309 ELF 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 255 LATSFSLFHQMPGP-DLCTYNCLISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLI 312
++ + +F ++ P ++ +N LI ++G A ++ ++ +PD TY LI
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
+ + I + + +GF V NSLL + V+ A ++F+KM ++ +
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
A +N +I+G +NG+PE A L+ ++ KG DG T
Sbjct: 189 A----WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ L ++ G ++ A K+F+ E + +NS+++ F + G EA A+ TEM
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D T ++ KIG L + ++K G ++ N L++ + GR++E
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA-GCTPNHVTDTTLD 764
F++M ++ + V++ +LI + G K+A + K M G P +T +
Sbjct: 276 AKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331
Query: 765 Y 765
Y
Sbjct: 332 Y 332
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
+P Y +++ + + G +EA + EM ++ TY+++I L + G+ A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+ +L G + + +N L+ KAGR ++V + + QMK G PD +TYN LIE H
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
+ L++A K L M+ C V +T + + R I+K R
Sbjct: 372 RDENLENAVKVLNTMIKKKC---EVNASTFNTIFRYIEKKR 409
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
F L+ +A + E F++ M+ G D ++I I + + S F +
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNR-MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 266 PG---PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
PD+ Y L+ C+ G++ +A V++++ +P+ +TY+ +I C+ +I
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A +F M ++G P I +N+L+ V KA + + Q++ +M + G + TYN LI
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
++ E A + + KK V+ T++ I
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLG 284
LM + + + I I + G + + F++M PD ++ +IS L +
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR 235
Query: 285 KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
+ +A ++ L +PD YT L++G C+ +I A ++F +M G P Y+
Sbjct: 236 RASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYS 294
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
++D L + ++S A +F M G + T+N L+ +K GR E ++ +KK
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 405 GQFVDGITYSIIV 417
G D ITY+ ++
Sbjct: 355 GCEPDTITYNFLI 367
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ IAF+ ++ L + E Q F L D+ F D Y + + G+++ + +
Sbjct: 220 DKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNLVRGWCRAGEISEAEKV 277
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M P++ TY+ +I LC+ G++ A V+ D+ P+ T+ L++ K
Sbjct: 278 FKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVK 337
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ + +++NQM G P TI YN L++ + + A ++ M ++ + + T
Sbjct: 338 AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAST 397
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+N + + K A+ ++ + + + +TY+I++
Sbjct: 398 FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 578 DSFDIDMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNE 635
D F+ D++ + + G++S A K+F+ AG++P YTY+ ++ + + G +
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
A + +M + C + T+N +++ K GR + + +++ K G D + YN LI
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
A + ++ K M + T+NT+ K + A++ M++A C P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 756 NHVT 759
N VT
Sbjct: 429 NTVT 432
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G++S A +F ++G P + T+N++M VK G + + +M + C D TY
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N +I+ + + A +L+ ++K+ ++ +NT+ + K ++ ++ + +M
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ P+ VTYN L+ + + K K M D PN
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + + G+ +++ + G +P + TYN ++ + + A ++ M +
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K C + +T+N I + + K + A + ++++ + V YN L+ + D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC-TPN 756
V K ++M + P+V TY L+ + G +AYK K M++ C TP+
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPS 500
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+ YN ++ K F+ AW +I M + I T+ ++I+ + G A A +R
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ G D + ++ +I+ L + R E FF+ +K PDV+ Y L+ +AG
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 738 LKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
+ +A K K M AG PN T +D L R
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 139/348 (39%), Gaps = 26/348 (7%)
Query: 77 LSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQI 136
+S +++++R R ++ V +F+ ++ +L E
Sbjct: 184 ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 137 LDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALD 196
D ++ R +P ++Y +L+ R I A +F ++ A ++
Sbjct: 244 FDSLKDR--FEPDV--IVYTNLVRGWCRAGEISEAEKVFKEM------------KLAGIE 287
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
N + SI + AL + VF ++D G A + +N + G
Sbjct: 288 PNVYTYSIVID----ALCRCGQISRAHDVFADMLDS-GCAPNAITFNNLMRVHVKAGRTE 342
Query: 257 TSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+++QM PD TYN LI C+ +++A+ V + + + T+ T+
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
+ K ++ A R++++M P T+ YN L+ + + ++ ++M + V+
Sbjct: 403 RYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT-YSIIVLQ 419
+ TY +L+ G AY LF ++ ++ ++ Y +++ Q
Sbjct: 463 PNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/520 (19%), Positives = 202/520 (38%), Gaps = 51/520 (9%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D T+ +I +L ++ K+ A + D+ D + LI+ K + + +IF
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M + G YNSL V+ + + A + F KM EGV+ + TYN+++ G +
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTI 448
R E A F D+K +G D T++ ++ +V+
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 449 TSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPS- 507
T+++ G R D R+ + +R + P YS + P
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNA------------------TTYSTLLPGL 370
Query: 508 --KGDFSEIMSILTGSQDANLDSHDTKI-------EDEEGDEWSLSPHMDKLA------- 551
G E +IL ++ D I + + GD + + + +A
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAE 430
Query: 552 ---------NQVKSSGY--ASQLFTPTPGQRVQQKGSDSFDID--MVNTFLSIFLAKGKL 598
NQ K+S Y A +L + + + D+ +++ N + G+
Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQT 490
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
+ A LF + GV N+++ K+G + ++ I+ M + P + Y ++
Sbjct: 491 AKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELL 549
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM--KSS 716
I+ G A LD +++ G D ++ ++I +L + GR+ ++ M K+
Sbjct: 550 IKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
GI ++ ++E G +++A + ++ G T +
Sbjct: 610 GIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD 649
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/538 (20%), Positives = 219/538 (40%), Gaps = 55/538 (10%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M +KG D + + I ++G G + S +F +M + +YN L V+ + G+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
A + + + +P TY ++ G + +++ A R F M G P +N+
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+++ + K+ EA +LF +M + S +Y +I G + R + +F +++ G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWD--W 463
+ TYS ++ G +V+ I M+ H + + +
Sbjct: 356 IEPNATTYSTLL----------------PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQD 523
L+ + GD+ KA + N P++ Y + ++ S + +
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKA---MATLNVPAEAGHYGVLIENQCKAS--------AYN 448
Query: 524 ANLDSHDTKIEDE---------EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
+ DT IE E E + + +P ++ L N +++ A LF + VQ
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAK-AEVLFRQLMKRGVQ- 506
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
D D +N + +G + ++ +I + GV S Y ++ S++ KG
Sbjct: 507 ------DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPG 560
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL-KQGGYLD-IVMYNT 692
+A + M E D + + +I+ L + GR AS ++ ++ K G D + +
Sbjct: 561 DAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAK 620
Query: 693 LINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
++ AL G ++E + + +G D+ ++L+ V S+ G A K L L+
Sbjct: 621 ILEALLMRGHVEEALGRIDLLNQNGHTADL---DSLLSVLSEKGKTIAALKLLDFGLE 675
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
+D DM + + G + + K+F+ + GV+ +YNS+ +++G + A
Sbjct: 183 WDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRY 242
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+M + TYN+++ G R + A + + +G D +NT+IN +
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++DE K F +MK + I P VV+Y T+I+ + + D + + M +G PN T
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 760 DTTL 763
+TL
Sbjct: 363 YSTL 366
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
F L+ + KA + E ++F K+ D G YN G + F++M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDL-GVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P TYN ++ +++ AL +ED+ PD T+ T+I G C+ K+
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A ++F +M N P + Y +++ +V + ++FE+M G++ + TY+ L
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 382 IHGLIKNGRPEAAYTLFCDLKKK 404
+ GL G+ A + ++ K
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAK 389
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNC 275
AD++L + H ++ + GF + N +H + GD+A+++ +F +MP DL +N
Sbjct: 2 ADVRL--GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 59
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
+I+ + GK ++AL ++ ++N+ +PD FT +L+ C K + R+ M G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
N LLD+ + +V EA LF++M V + ++ LI GL NG + A
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAI 175
Query: 396 TLF 398
LF
Sbjct: 176 ELF 178
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ L ++ G ++ A K+F+ E + +NS+++ F + G EA A+ TEM
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D T ++ KIG L + ++K G ++ N L++ + GR++E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA-GCTPNHVTDTTLD 764
F++M ++ + V++ +LI + G K+A + K M G P +T +
Sbjct: 143 AKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 198
Query: 765 Y 765
Y
Sbjct: 199 Y 199
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 586 NTFLSIFLAKGKL---SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
NTF +F ++ A KL E EAG P ++TY + + +F + G +EA +
Sbjct: 269 NTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDF 328
Query: 643 M---GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
M G + T+ ++I L K +A+ ++ R++ G D+ Y +I +
Sbjct: 329 MITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCM 388
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
A ++DE KF ++M + G PD+VTYN + V + +A K M+++ C P+ T
Sbjct: 389 AEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQT 448
Query: 760 DTTLDYLGREID 771
L + E+D
Sbjct: 449 YNMLISMFFEMD 460
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM-------PGPDLCTYNCLISVLCK 282
M + G + + Y I F G + + LF M P T+ +I L K
Sbjct: 294 MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAK 353
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
K ++ + + + PD TY +I+G C K+D A + ++M N G+ P +
Sbjct: 354 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVT 413
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
YN L VL + K EA +L+ +M + S QTYN+LI + P+ A+ + ++
Sbjct: 414 YNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMD 473
Query: 403 KKGQFVDGITYSIIV 417
K+ D TY ++
Sbjct: 474 KRDCVQDVETYCAMI 488
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 4/216 (1%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ +N L+ LCK G VK+ + + +PD T+ L G C+ A ++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRV-KPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS---CQTYNILIHG 384
+M G +P Y + +D +A V EA LF+ M +G S +T+ ++I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD 444
L KN + E + L + G D TY ++ +G+ D
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 445 LVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
+VT + + ++ + D +L + E P V
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSV 446
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N FL + K A KL+ E+ P TYN ++S F + + A+
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
TEM ++ C D+ TY +I GL RA A +L+ ++ +G L ++++ + L +
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 701 GRIDEVNKFFEQMK 714
G + ++K E MK
Sbjct: 530 GNLKAIHKVSEHMK 543
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ TY +I +C KV +A ++++ + PD TY ++ C+ K D A ++
Sbjct: 374 PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+ +M + P YN L+ + F+ A + +M + +TY +I+GL
Sbjct: 434 YGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFD 493
Query: 388 NGRPEAAYTLFCDLKKKG 405
R + A L ++ KG
Sbjct: 494 CHRAKEACFLLEEVVNKG 511
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
F ++VAL K D E ++ +++ G D Y I + ++ +M
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMIST-GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
PD+ TYNC + VLC+ K +AL ++ + P TY LI +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A + +M Y ++++ LF + EAC L E++ +G+K + ++
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 382 IHGLIKNGRPEAAYTLFCDLKK 403
+ L + G +A + + +KK
Sbjct: 523 LMRLSEVGNLKAIHKVSEHMKK 544
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 39/183 (21%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P +N ++ + K G E A++ M ++ P D T+N++ G ++ A +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKP-DANTFNVLFFGWCRVRDPKKAMKL 290
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE----------------------- 711
L+ +++ G + Y I+ +AG +DE F+
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 712 ---------------QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+M S+G PDV TY +IE A + +AYKFL M + G P+
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 757 HVT 759
VT
Sbjct: 411 IVT 413
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 181/497 (36%), Gaps = 100/497 (20%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ +N LI + + K+A ++ L + P TY LI+ C I+ A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M N+ P TI GV YN I GL+K
Sbjct: 235 LVEMQNHHVSPKTI----------------------------GV----TVYNAYIEGLMK 262
Query: 388 N-GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
G E A +F +K+ TY++++ ++
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFP 506
T T+L+ + G + + + + ++E L P V + A ME+ YS
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES-----------YSRAGY 371
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
G +EI S++ D I + L + + ++K G A P
Sbjct: 372 PYGA-AEIFSLMQ-HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA-----P 424
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
T + LS + ++ + + +E GV+P ++ NS+++
Sbjct: 425 TMKSHM--------------LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD 686
+ + G F + I+ EM C ADI+TYN+
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNI----------------------------- 501
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
LIN GKAG ++ + + F ++K PDVVT+ + I +S+ L + +
Sbjct: 502 ------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 747 MMLDAGCTPNHVTDTTL 763
M+D+GC P+ T L
Sbjct: 556 EMIDSGCAPDGGTAKVL 572
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG---DLATS 258
N + L+ A + + + +++F +L + G D + YN + ++ G A
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 259 FSLFHQMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
FSL M PD +YN ++ + G DA V+E++ P ++ L+ K
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ I +M NG P T V NS+L++ + + ++ ++ +M A T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
YNILI+ K G E LF +LK+K D +T++
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
+ N ++++ K ++ KL+ P TY +++++F ++G +A I +
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
+ E D+ YN +++ + G A+ I + G D YN +++A G+AG
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDT 761
+ FE+MK GI P + ++ L+ +SKA + +K M + G P+ V ++
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 762 TLDYLGR 768
L+ GR
Sbjct: 467 MLNLYGR 473
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 40/237 (16%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
+ +K S D+ N + + K + A L+ E+ P TY ++ ++ G
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 632 YFNEAWAIITEM-GEKLCPADIAT--YNMIIQGLGKI-GRADLASAILDRLLKQGGYLDI 687
A ++ EM + P I YN I+GL K G + A + R+ +
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 688 VMYNTLINALGKA-----------------------------------GRIDEVNKFFEQ 712
YN +IN GKA G ++ + FEQ
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
++ G+ PDV YN L+E +S+AG A + +M GC P+ + + +D GR
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWE 294
T YN+ I+ +G S+ L+ +M P++CTY L++ + G + A ++E
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
L +PD + Y L++ + A IF+ M + G P YN ++D +A
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
S+A +FE+M + G+ + +++ +L+ K
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
D++N + + L K S+ I ++ P +N ++ ++ +K + EA ++ +
Sbjct: 143 DLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQ 202
Query: 643 MGEKLCPADIATYNMIIQGL---GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ E TY ++I+ G I RA++ + + + +YN I L K
Sbjct: 203 LLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK 262
Query: 700 -AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
G +E F++MK P TYN +I ++ KA ++K M C PN
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322
Query: 759 TDTTL 763
T T L
Sbjct: 323 TYTAL 327
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 181/497 (36%), Gaps = 100/497 (20%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ +N LI + + K+A ++ L + P TY LI+ C I+ A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+M N+ P TI GV YN I GL+K
Sbjct: 213 LVEMQNHHVSPKTI----------------------------GV----TVYNAYIEGLMK 240
Query: 388 N-GRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
G E A +F +K+ TY++++ ++
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFP 506
T T+L+ + G + + + + ++E L P V + A ME+ YS
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES-----------YSRAGY 349
Query: 507 SKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTP 566
G +EI S++ D I + L + + ++K G A P
Sbjct: 350 PYGA-AEIFSLMQ-HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA-----P 402
Query: 567 TPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSS 626
T + LS + ++ + + +E GV+P ++ NS+++
Sbjct: 403 TMKSHM--------------LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 627 FVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD 686
+ + G F + I+ EM C ADI+TYN+
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNI----------------------------- 479
Query: 687 IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
LIN GKAG ++ + + F ++K PDVVT+ + I +S+ L + +
Sbjct: 480 ------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 747 MMLDAGCTPNHVTDTTL 763
M+D+GC P+ T L
Sbjct: 534 EMIDSGCAPDGGTAKVL 550
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG---DLATS 258
N + L+ A + + + +++F +L + G D + YN + ++ G A
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 259 FSLFHQMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
FSL M PD +YN ++ + G DA V+E++ P ++ L+ K
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ I +M NG P T V NS+L++ + + ++ ++ +M A T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
YNILI+ K G E LF +LK+K D +T++
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N ++++ K ++ KL+ P TY +++++F ++G +A I ++ E
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ YN +++ + G A+ I + G D YN +++A G+AG +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLD 764
FE+MK GI P + ++ L+ +SKA + +K M + G P+ V ++ L+
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 765 YLGR 768
GR
Sbjct: 448 LYGR 451
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 40/237 (16%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
+ +K S D+ N + + K + A L+ E+ P TY ++ ++ G
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 632 YFNEAWAIITEM-GEKLCPADIAT--YNMIIQGLGKI-GRADLASAILDRLLKQGGYLDI 687
A ++ EM + P I YN I+GL K G + A + R+ +
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 688 VMYNTLINALGKA-----------------------------------GRIDEVNKFFEQ 712
YN +IN GKA G ++ + FEQ
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
++ G+ PDV YN L+E +S+AG A + +M GC P+ + + +D GR
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 239 TWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWE 294
T YN+ I+ +G S+ L+ +M P++CTY L++ + G + A ++E
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 295 DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKAT 354
L +PD + Y L++ + A IF+ M + G P YN ++D +A
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 355 KVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
S+A +FE+M + G+ + +++ +L+ K
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
D++N + + L K S+ I ++ P +N ++ ++ +K + EA ++ +
Sbjct: 121 DLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQ 180
Query: 643 MGEKLCPADIATYNMIIQGL---GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
+ E TY ++I+ G I RA++ + + + +YN I L K
Sbjct: 181 LLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK 240
Query: 700 -AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
G +E F++MK P TYN +I ++ KA ++K M C PN
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 759 TDTTL 763
T T L
Sbjct: 301 TYTAL 305
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 115/548 (20%), Positives = 215/548 (39%), Gaps = 108/548 (19%)
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
G L + LF MP ++ T N +++ K ++ +A ++ ++ + ++T ++
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVML 145
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
C + + A +F++M + +N+L+ L + + +A Q+F+ M V
Sbjct: 146 TALCDDGRSEDAVELFDEMPERN----VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV- 200
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
++N +I G I+N E A LF D+ +K
Sbjct: 201 ---VSWNAMIKGYIENDGMEEAKLLFGDMSEK---------------------------- 229
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK 492
++VT TS++ G ++G RL + E ++V W A +
Sbjct: 230 -----------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS----WTAMISGFAW 274
Query: 493 NPPSK---------KKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEE-GDEWS 542
N + KKD + P+ G+ ++ G ++ + + W
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPN-GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 543 LSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLAC 602
H +LA + +S L Q ++SFD+ N ++ +L G L A
Sbjct: 334 TVDHDGRLAKSLVHMYASSGLIASA-----QSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 603 KLFEI----------------FTEAGV------------DPVSYTYNSIMSSFVKKGYFN 634
LFE + EAG D T+ ++S V+ F
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFA 448
Query: 635 EAWAIITEMGE-KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD--IVMYN 691
EA +++++M L P + +TY++++ G D I + K D +++ N
Sbjct: 449 EAASLLSDMVRCGLKPLN-STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
+L++ K G I++ + F +M + D V++N++I S GL A K MLD+
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 752 GCTPNHVT 759
G PN VT
Sbjct: 564 GKKPNSVT 571
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
T A DP NS++S + K G +A+ I +M +K D ++N +I GL G A
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLA 550
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNT 727
D A + +L G + V + +++A +G I + F+ MK + I P + Y +
Sbjct: 551 DKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS 610
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+I++ +AG LK+A +F+ + TP+H
Sbjct: 611 MIDLLGRAGKLKEAEEFISAL---PFTPDHTV 639
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/516 (20%), Positives = 197/516 (38%), Gaps = 51/516 (9%)
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH--QPDHFTYTT 310
G+L + +F +MP D+ ++ +I +ALI++ + H PD +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
+++ C ++ I + + V +SLLD+ + K+ ++C++F +M
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
T+ +I GL+ GR + T F ++ + + D T++I +
Sbjct: 174 A----VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP---------KVL 481
RGFV L SL + G L +++ E D+V ++
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 482 RWKAGMEASIK----NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEE 537
+ +E IK P ++ ++ MF + S + + G Q H +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL---VWGEQ-----LHCNVLSLGL 341
Query: 538 GDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGK 597
D S+S M K+ + + AS LF G R + DI +T + + G
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLF---QGMRCR-------DIISWSTIIGGYCQAGF 391
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMS-----SFVKKGYFNEAWAIITEMGEKLCPADI 652
K F ++G P + S++S + ++ G A A+ + + +
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-----NS 446
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+ +I K G AS I + DIV +IN + G+ E FE+
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRD----DIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
G PD VT+ +++ + +G L + + MM
Sbjct: 503 SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM 538
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAG----VDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
N L ++ GK L K+ E+F A VD +SY N+I++++ K + + I
Sbjct: 703 NVLLDVY---GKAKLFKKVNELFLLAKRHGVVDVISY--NTIIAAYGKNKDYTNMSSAIK 757
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
M + YN ++ GK + + +IL R+ K D YN +IN G+ G
Sbjct: 758 NMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDT 761
IDEV +++K SG+ PD+ +YNTLI+ + G++++A +K M P+ VT T
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYT 877
Query: 762 TL 763
L
Sbjct: 878 NL 879
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
+ + + ++ + +T + I+ G+ S A KL+ +GV ++ ++ +VK G
Sbjct: 549 KMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGS 608
Query: 633 FNEAWAIITEMGEK--LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
EA +++ M E+ + P D+ + +++ K D + R+ K G + + MY
Sbjct: 609 LEEACSVLEIMDEQKDIVP-DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMY 667
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
N +IN +A +DE++ FE+M G P+ VT+N L++V+ KA L K
Sbjct: 668 NCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+++++ ++G A +I+ M +I YN +I G GKI + + A + RL G
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D Y ++I G+A +E +++++K G P+ TLI + +K G A
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 743 KFLKMMLDAGC 753
K ++ M GC
Sbjct: 440 KTIEDMTGIGC 450
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
YN+++ ++ K + +I+ M + D TYN++I G+ G D + +L L
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+ G D+ YNTLI A G G ++E ++M+ I PD VTY L+ +
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 739 KDAYKFLKMMLDAG 752
+A K+ M G
Sbjct: 890 LEAIKWSLWMKQMG 903
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 34/212 (16%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT-------------------------- 619
NT + KG + LA K F + E GV P T
Sbjct: 214 NTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK 273
Query: 620 --------YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
Y+S+++ + + +++A +I M + + + +++ + G+ +LA
Sbjct: 274 FGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELA 333
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+IL + G +I+ YNTLI GK +++ F ++ + G+ PD +Y ++IE
Sbjct: 334 ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+A ++A + + + G PN TL
Sbjct: 394 WGRADNYEEAKHYYQELKRCGYKPNSFNLFTL 425
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 6/191 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N++ FN LL KA + + ++F L+ K+ +D YN I A+G D S
Sbjct: 698 NTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSA 755
Query: 262 FHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
M L YN L+ K +++ + + + PDH+TY +I +
Sbjct: 756 IKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
ID + ++ +G P YN+L+ V EA L ++M + T
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 378 YNILIHGLIKN 388
Y L+ L +N
Sbjct: 876 YTNLVTALRRN 886
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 5/172 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
I++N ++ A K K M GF++ YN + A+G + S+
Sbjct: 734 ISYNTIIAAYGKNKDYTNMSSAI-KNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 264 QM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M GPD TYN +I++ + G + + V ++L PD +Y TLI+
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
++ A + +M P + Y +L+ L + + EA + M Q G+
Sbjct: 853 MVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 11/187 (5%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKD 288
G LD G++I + + G L + S+ M PD+ + ++ + K
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDK 647
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
++ + + Y +I C + +D + F +M GF P T+ +N LLD
Sbjct: 648 LQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
V KA + +LF + GV +YN +I KN YT K QF
Sbjct: 708 VYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKN----KDYTNMSSAIKNMQF- 761
Query: 409 DGITYSI 415
DG + S+
Sbjct: 762 DGFSVSL 768
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 589 LSIFLAKGKLSLACKLFEIFTE-AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
+ +++ G L AC + EI E + P Y + ++ + K ++ + + +
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSG 659
Query: 648 CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVN 707
+ YN +I + D S + +++ G + V +N L++ GKA +VN
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVN 719
Query: 708 KFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK-MMLDAGCTPNHVTDTTLDYL 766
+ F K G+ DV++YNT+I + K + +K M D +T LD
Sbjct: 720 ELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAY 778
Query: 767 G--REIDKLR 774
G ++++K R
Sbjct: 779 GKDKQMEKFR 788
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 10/259 (3%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
F +L +K D++ + Q +++++ K G + YN I+ L F +M
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIR-KSGIHWNQEMYNCVINCCARALPLDELSGTFEEM 690
Query: 266 P----GPDLCTYNCLISVL--CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
P+ T+N L+ V KL K + L + + D +Y T+I K
Sbjct: 691 IRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV---DVISYNTIIAAYGKNK 747
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
+ + M +GF YN+LLD K ++ + + ++M + TYN
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I+I+ + G + + +LK+ G D +Y+ ++ R
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 440 GFVVDLVTITSLMVGIHKH 458
+ D VT T+L+ + ++
Sbjct: 868 NIIPDKVTYTNLVTALRRN 886
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 142/383 (37%), Gaps = 68/383 (17%)
Query: 43 LTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXX 102
L+ ++ +L+ L + FF+W +YS+ILR+L R
Sbjct: 115 LSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL 174
Query: 103 XSIKQDAVVLHPQSFNPLLHSLIISHN----FHETLQILDYIQQRHLLQPGCTPLIYNSL 158
+ + V NP L L I+ + H + ++ ++ C+ +N+L
Sbjct: 175 KGMVCEGV-------NPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNAL 227
Query: 159 LIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADM 218
L +H+ A S+F N+ +I F
Sbjct: 228 LRCLCERSHVSAAKSVF----------------------NAKKGNIPF------------ 253
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYN 274
D+ YNI I + G++ + +M GPD +Y+
Sbjct: 254 -------------------DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYS 294
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
LI L + G++ D++ +++++ + PD Y +I D + R + +M +
Sbjct: 295 HLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDE 354
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
P Y+ L+ L K KVS+A ++FE+M GV + + L G P AA
Sbjct: 355 ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAA 414
Query: 395 YTLFCDLKKKGQFVDGITYSIIV 417
++ +K G + Y +++
Sbjct: 415 MVIYQKSRKAGCRISESAYKLLL 437
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D++ + + F+ + A +LFE GV + ++N+++ ++ + + A ++
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+ P D +YN++I G K+G + +L +++ G D + Y+ LI LG+
Sbjct: 245 NAKKGNI-PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
GRI++ + F+ +K G PD YN +I A ++ ++ + MLD C PN T
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 761 TTL 763
+ L
Sbjct: 364 SKL 366
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 577 SDSFDI----DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV-SYTYNSIMSSFVKKG 631
S+SF + + N L + +S A +F + G P S +YN ++S + K G
Sbjct: 212 SESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLG 269
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
E ++ EM E D +Y+ +I+GLG+ GR + + I D + +G D +YN
Sbjct: 270 EVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYN 329
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
+I A DE +++ +M P++ TY+ L+ K + DA + + ML
Sbjct: 330 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Query: 752 GCTP 755
G P
Sbjct: 390 GVLP 393
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 196/478 (41%), Gaps = 42/478 (8%)
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
++ LI C + K++ A ++ ++ G P V SLL + + + A + E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
G + ++ I +G + + L +K G D + +++ + +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
G D V+++S++ G K G+ + +L+ R L P + + +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSF 379
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIMSI--------LTGSQDA--NLDSHDTKIEDE 536
+ S M + F EI + T D NL D +
Sbjct: 380 L--------SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 537 EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRV-QQKGSDSFDIDMVNTFLSIFLAK 595
S +P L G S+ + + + V + ++ +D+V T+ ++
Sbjct: 432 GALLKSGNP--PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV-TYNNLMHGY 488
Query: 596 GKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPAD 651
GK K+FE+ E AG+ P TYN ++ S V +GY +EA II+E+ + P+
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 652 IATYNMIIQGLGKIGRADLASAIL------DRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+A + +I G K R D A + D +K D+V + L++ KA R+++
Sbjct: 549 LA-FTDVIGGFSK--RGDFQEAFILWFYMADLRMKP----DVVTCSALLHGYCKAQRMEK 601
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F ++ +G+ PDVV YNTLI + G ++ A + + +M+ G PN T L
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+I + ++FLS + G + A +F+ E G+ P Y +++ + G ++A+
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+ + P + T ++I + G A ++ + +G LD+V YN L++ GK
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
++++V + ++M+S+GI+PDV TYN LI G + +A + + ++ G P+ +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 761 TTLDYLGREIDKLRYQKASIL 781
T D +G + +Q+A IL
Sbjct: 552 T--DVIGGFSKRGDFQEAFIL 570
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 2/296 (0%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+AF + L KA E V KL G + D+ + I F G + L H
Sbjct: 307 VAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH 365
Query: 264 QMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P++ Y+ +S +C G + A +++++ PD YTT+I G C + D
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A + F + +G P L+ + +S+A +F M EG+K TYN L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
HG K + + L +++ G D TY+I++ RGFV
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
+ T ++ G K G + L ++ + + P V+ A + K +K
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 160/421 (38%), Gaps = 35/421 (8%)
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ I+ C D + M + G RP + + +D L KA + EA + K+
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
G+ + + +I G K G+PE A L + + YS +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI---FVYSSFLSNICSTGDMLR 391
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
G + D V T+++ G GR TD+ ++ G L+ K+G
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR---TDKAFQYF--GALL------KSG-- 438
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMD 548
NPPS + + + F I DA + K E + D + +
Sbjct: 439 ----NPPSLTTS-TILIGACSRFGSI-------SDAESVFRNMKTEGLKLDVVTYN---- 482
Query: 549 KLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 608
N + G QL + S D+ N + + +G + A ++
Sbjct: 483 ---NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
G P + + ++ F K+G F EA+ + M + D+ T + ++ G K R
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
+ A + ++LL G D+V+YNTLI+ G I++ + M G+ P+ T++ L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Query: 729 I 729
+
Sbjct: 660 V 660
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 40/202 (19%)
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLIS 278
+ VF M +G LD YN +H +G L F L +M PD+ TYN LI
Sbjct: 463 ESVFRN-MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 279 VLC-----------------------------------KLGKVKDALIVWEDLNACAHQP 303
+ K G ++A I+W + +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 304 DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF 363
D T + L+ G CK +++ A +FN++ + G +P ++YN+L+ + +AC+L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 364 EKMAQEGVKASCQTYNILIHGL 385
M Q G+ + T++ L+ GL
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL 663
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 168/435 (38%), Gaps = 36/435 (8%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNC 275
LE + F + M +G L+ ++ I + G + L M PD+ +
Sbjct: 252 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
I LCK G +K+A V L D + +++I G CK K + A ++ +H+
Sbjct: 312 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFR 368
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
RP VY+S L + + A +F+++ + G+ C Y +I G GR + A+
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 396 TLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGI 455
F L K G T +I++ G +D+VT +LM G
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 456 HKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI-------KNPPSKKKDYSPMFPSK 508
K + + L+ +R + P V + + + + N + PS
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 509 GDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP 568
F++++ + D + + L +M L + ++ L
Sbjct: 549 LAFTDVIGGFSKRGDFQ-------------EAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 569 GQRVQQ------KGSDSF---DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
QR+++ K D+ D+ + NT + + + G + AC+L + + G+ P T
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Query: 620 YNSIMSSFVKKGYFN 634
+++++ K + N
Sbjct: 656 HHALVLGLEGKRFVN 670
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+ A + F ++G P T ++ + + G ++A ++ M + D+ TY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N ++ G GK + + ++D + G D+ YN LI+++ G IDE N+ ++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRY 775
G P + + +I SK G ++A+ M D P+ VT + L L R
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL--LHGYCKAQRM 599
Query: 776 QKASILNEK 784
+KA +L K
Sbjct: 600 EKAIVLFNK 608
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 196/478 (41%), Gaps = 42/478 (8%)
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
++ LI C + K++ A ++ ++ G P V SLL + + + A + E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXX 426
G + ++ I +G + + L +K G D + +++ + +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
G D V+++S++ G K G+ + +L+ R L P + + +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSF 379
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIMSI--------LTGSQDA--NLDSHDTKIEDE 536
+ S M + F EI + T D NL D +
Sbjct: 380 L--------SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 537 EGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRV-QQKGSDSFDIDMVNTFLSIFLAK 595
S +P L G S+ + + + V + ++ +D+V T+ ++
Sbjct: 432 GALLKSGNP--PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV-TYNNLMHGY 488
Query: 596 GKLSLACKLFEIFTE---AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPAD 651
GK K+FE+ E AG+ P TYN ++ S V +GY +EA II+E+ + P+
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 652 IATYNMIIQGLGKIGRADLASAIL------DRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+A + +I G K R D A + D +K D+V + L++ KA R+++
Sbjct: 549 LA-FTDVIGGFSK--RGDFQEAFILWFYMADLRMKP----DVVTCSALLHGYCKAQRMEK 601
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F ++ +G+ PDVV YNTLI + G ++ A + + +M+ G PN T L
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+I + ++FLS + G + A +F+ E G+ P Y +++ + G ++A+
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+ + P + T ++I + G A ++ + +G LD+V YN L++ GK
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
++++V + ++M+S+GI+PDV TYN LI G + +A + + ++ G P+ +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 761 TTLDYLGREIDKLRYQKASIL 781
T D +G + +Q+A IL
Sbjct: 552 T--DVIGGFSKRGDFQEAFIL 570
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 2/296 (0%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+AF + L KA E V KL G + D+ + I F G + L H
Sbjct: 307 VAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH 365
Query: 264 QMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
P++ Y+ +S +C G + A +++++ PD YTT+I G C + D
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A + F + +G P L+ + +S+A +F M EG+K TYN L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFV 442
HG K + + L +++ G D TY+I++ RGFV
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 443 VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK 498
+ T ++ G K G + L ++ + + P V+ A + K +K
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 160/421 (38%), Gaps = 35/421 (8%)
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ I+ C D + M + G RP + + +D L KA + EA + K+
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXX 428
G+ + + +I G K G+PE A L + + YS +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI---FVYSSFLSNICSTGDMLR 391
Query: 429 XXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGME 488
G + D V T+++ G GR TD+ ++ G L+ K+G
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR---TDKAFQYF--GALL------KSG-- 438
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMD 548
NPPS + + + F I DA + K E + D + +
Sbjct: 439 ----NPPSLTTS-TILIGACSRFGSI-------SDAESVFRNMKTEGLKLDVVTYN---- 482
Query: 549 KLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIF 608
N + G QL + S D+ N + + +G + A ++
Sbjct: 483 ---NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 609 TEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
G P + + ++ F K+G F EA+ + M + D+ T + ++ G K R
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
+ A + ++LL G D+V+YNTLI+ G I++ + M G+ P+ T++ L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Query: 729 I 729
+
Sbjct: 660 V 660
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 40/202 (19%)
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLIS 278
+ VF M +G LD YN +H +G L F L +M PD+ TYN LI
Sbjct: 463 ESVFRN-MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 279 VLC-----------------------------------KLGKVKDALIVWEDLNACAHQP 303
+ K G ++A I+W + +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 304 DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF 363
D T + L+ G CK +++ A +FN++ + G +P ++YN+L+ + +AC+L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 364 EKMAQEGVKASCQTYNILIHGL 385
M Q G+ + T++ L+ GL
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL 663
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 168/435 (38%), Gaps = 36/435 (8%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNC 275
LE + F + M +G L+ ++ I + G + L M PD+ +
Sbjct: 252 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
I LCK G +K+A V L D + +++I G CK K + A ++ +H+
Sbjct: 312 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFR 368
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
RP VY+S L + + A +F+++ + G+ C Y +I G GR + A+
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 396 TLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGI 455
F L K G T +I++ G +D+VT +LM G
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 456 HKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI-------KNPPSKKKDYSPMFPSK 508
K + + L+ +R + P V + + + + N + PS
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 509 GDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP 568
F++++ + D + + L +M L + ++ L
Sbjct: 549 LAFTDVIGGFSKRGDFQ-------------EAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 569 GQRVQQ------KGSDSF---DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYT 619
QR+++ K D+ D+ + NT + + + G + AC+L + + G+ P T
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Query: 620 YNSIMSSFVKKGYFN 634
+++++ K + N
Sbjct: 656 HHALVLGLEGKRFVN 670
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+ A + F ++G P T ++ + + G ++A ++ M + D+ TY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N ++ G GK + + ++D + G D+ YN LI+++ G IDE N+ ++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRY 775
G P + + +I SK G ++A+ M D P+ VT + L L R
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL--LHGYCKAQRM 599
Query: 776 QKASILNEK 784
+KA +L K
Sbjct: 600 EKAIVLFNK 608
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 125/303 (41%), Gaps = 29/303 (9%)
Query: 108 DAVVLHPQ--SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRN 165
D L+P +F L+ L+ + N + ++I + + + + P++Y+ L++ ++N
Sbjct: 193 DNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV---VDPVVYSYLMMGCVKN 249
Query: 166 NHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQV 225
+ ++ +L E + + + QL+ +M+ E +
Sbjct: 250 SDADGVLKLYQELKEKLGGFV--------------DDGVVYGQLMKGYFMKEMEKEAMEC 295
Query: 226 FHKLM-DKKGFALDTWGYNICIHAFGCWGDLATSFSLF------HQMP---GPDLCTYNC 275
+ + + + + YN + A G + LF H P +L T+N
Sbjct: 296 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 355
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
+++ C GK ++A+ V+ + PD ++ L+ C + A +++ +M
Sbjct: 356 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 415
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+P Y L+D FK K+ E ++ M + ++ + YN L LIK G+ + A
Sbjct: 416 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Query: 396 TLF 398
+ F
Sbjct: 476 SFF 478
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWA 638
+ ++ N ++ + A GK A ++F + P + ++N++M+ EA
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ EM EK D TY +++ K G+ D +A +++ ++ +YN L + L
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 466
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
KAG++D+ FF+ M S + D Y ++ S+AG L + K + MLD V
Sbjct: 467 KAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV--RV 523
Query: 759 TDTTLDYLGREIDK 772
++ +++ E+ K
Sbjct: 524 SEELQEFVKEELRK 537
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY-----TYNSIMSSFVKKGYFNEAWAII 640
N L GK A KLF+ + P T+N +++ + G F EA +
Sbjct: 314 NYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+MG+ C D ++N ++ L A + + ++ D Y L++ K
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
G+IDE +++ M S + P++ YN L + KAG L DA F MM+
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCP-----AD 651
K ++ C + + V + YN ++ + + G F+EA + + ++ P +
Sbjct: 290 KEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN 349
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ T+N+++ G G+ + A + ++ D + +N L+N L + E K +
Sbjct: 350 LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYG 409
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+M+ + PD TY L++ K G + + + K M+++ PN
Sbjct: 410 EMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P + Y+ ++S KKG A + +EM C D + YN +I + D A A
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALI--TAHLHTRDKAKA- 187
Query: 675 LDRLLKQGGYLD-----------IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
L K GYLD +V YN L+ A ++G++D+VN F+ + S ++PDV
Sbjct: 188 ---LEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR--EIDKLRYQKASI 780
T+N +++ + K G++K+ L M C P+ +T + +D G+ E +K+ S+
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 781 LNEKDDPS 788
+ K+ P+
Sbjct: 305 MRSKEKPT 312
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L F GK+ LF+ + V P YT+N +M ++ K G E A++T M
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
C DI T+N++I GK + L++ + +N++I GKA ID+
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
F++M P +TY +I ++ G + A + +
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV----KKGYFNEA 636
D + + +S+ KG+ +A LF +G P + YN+++++ + K +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 637 WAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
+ +M G + C ++ TYN++++ + G+ D +A+ L D+ +N +++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
A GK G I E+ +M+S+ PD++T+N LI+ + K + + K ++ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P TYN ++ +F + G ++ A+ ++ D+ T+N ++ GK G A+
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
L R+ DI+ +N LI++ GK +++ + F+ + S P + T+N++I + K
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
A ++ A K M D P+ +T
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFIT 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 13/296 (4%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG- 267
L L K+D L+ +VF + ++ + D Y+ I G G + LF +M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 268 ---PDLCTYNCLISV-------LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
PD YN LI+ L KV+ L + + C QP+ TY L++ +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC--QPNVVTYNILLRAFAQ 220
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ K+D +F + + P +N ++D K + E + +M K T
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N+LI K E F L + + T++ +++
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
++ +T +++ G + + V E D V K A +E +N
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N + + K + + F+ + P T+NS++ ++ K ++A +
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + TY +I G G A I + + + L N ++ +
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
G E +K F + ++PD TY L + ++KA + + +K M G PN
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA---GVDPVSYTYNSIMSSFVK 629
+Q D F D++ T+ + A +L +L+ + E G P YTYN ++
Sbjct: 246 EQMLEDGFTPDVL-TYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
A ++ M E + + +I GL + G+ + +D +K G D+V
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
Y +I G +++ + F++M G P+V TYN++I AG K+A LK M
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 750 DAGCTPNHVTDTTL 763
GC PN V +TL
Sbjct: 425 SRGCNPNFVVYSTL 438
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 216 ADMKLEFQQVFHKLMD---KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----P 268
A+ +L ++L+D K GF+ D + YNI +H + +L + M P
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+ + LI L + GK++ ++ PD YT +I G +++ A +F
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+M G P YNS++ A K EAC L ++M G + Y+ L++ L
Sbjct: 386 KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNA 445
Query: 389 GRPEAAYTLFCDLKKKGQFVDGIT 412
G+ A+ + D+ +KG +V I+
Sbjct: 446 GKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEA---GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
TF + G+ LA + E F ++ P ++YN+I+ S + + + +M
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
E D+ TYN+++ ++G+ D +LD ++K G D+ YN L++ L +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M+ G+ P V+ + TLI+ S+AG L+ F+ + GCTP+ V T +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 764 --DYL-GREIDK 772
Y+ G E++K
Sbjct: 369 ITGYISGGELEK 380
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLIS 278
K + + H L+ K + L W Y + PD+ TYN ++
Sbjct: 222 KHSYNAILHSLLGVKQYKLIDWVYE----------------QMLEDGFTPDVLTYNIVMF 265
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
+LGK + +++ PD +TY L+ K A + N M G P
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ----TYNILIHGLIKNGRPEAA 394
G I + +L+D L +A K+ EAC+ F E VK C Y ++I G I G E A
Sbjct: 326 GVIHFTTLIDGLSRAGKL-EACKYF---MDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 395 YTLFCDLKKKGQFVDGITYSIIV 417
+F ++ +KGQ + TY+ ++
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMI 404
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L L + L ++E E G P TYN +M + + G + + ++ EM +
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK 285
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ TYN+++ L + A +L+ + + G ++ + TLI+ L +AG+++
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
F ++ G PDVV Y +I + G L+ A + K M + G PN T
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 593 LAKGKLSLAC-KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
LA G LA L E GV+P + +++ + G + E + C D
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ Y ++I G G + A + + ++G ++ YN++I AG+ E +
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+M+S G NP+ V Y+TL+ AG + +A++ +K M++ G
Sbjct: 422 EMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCK 282
++ M + GF D YNI + A G + L +M PDL TYN L+ L
Sbjct: 245 YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
K AL + + +P +TTLI G + K++ ++ G P +
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
Y ++ ++ +A ++F++M ++G + TYN +I G G+ + A L +++
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 403 KKGQFVDGITYSIIV 417
+G + + YS +V
Sbjct: 425 SRGCNPNFVVYSTLV 439
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 86/215 (40%)
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
CT+N LI + G +D + + ++P +Y ++ + ++ Q
Sbjct: 188 CTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQ 247
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M +GF P + YN ++ F+ K +L ++M ++G TYNIL+H L +
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 391 PEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITS 450
P AA L +++ G I ++ ++ G D+V T
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 451 LMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
++ G G + + + K + E +P V + +
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 58/108 (53%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ ++ +++ G+L A ++F+ TE G P +TYNS++ F G F EA A++
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
EM + C + Y+ ++ L G+ A ++ ++++G Y+ ++
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLI 468
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+S +N ++ L K V ++ K ++T + I + AF + + +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMKAFAAAKERKKAVGI 250
Query: 262 FHQMPGPD----LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F M + T NCL+ L + K+A ++++ L P+ TYT L+ G C+
Sbjct: 251 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCR 309
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ A RI+N M ++G +P + +N +L+ L ++ K S+A +LF M +G + ++
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Y I+I K E A F D+ G D Y+ ++
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
+D + +A N +L L ++ K + ++FH +M KG + Y I I F
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ T+ F M PD Y CLI+ K+ + +++ H PD TY
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI+ +H TRI+N+M N P +N ++ F A ++++M ++G
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
+ +Y +LI GLI G+ A ++ KG I Y+
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 111/275 (40%), Gaps = 5/275 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + LL + +E ++++ ++D G D +N+ + + + L
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 262 FHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
FH M P P++ +Y +I CK ++ A+ ++D+ QPD YT LI G
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+D + +M G P YN+L+ ++ +++ KM Q ++ S T
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N+++ E ++ ++ KKG D +Y++++
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
+G L+ H+ G+ + + L + +
Sbjct: 535 DKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 569
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ TY L++ C++ + +A +W D+ +PD + +++G ++ K A ++
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F+ M + G P Y ++ K + + A + F+ M G++ Y LI G
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ + Y L ++++KG DG TY+ ++
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F + + A + F+ ++G+ P + Y +++ F + + + ++ EM EK P D
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TYN +I+ + + + I +++++ I +N ++ + A + ++
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 496
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+M GI PD +Y LI G ++A ++L+ MLD G
Sbjct: 497 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 160/396 (40%), Gaps = 19/396 (4%)
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
GF + YNS++ +L K + + E+M +G+ + +T+ I +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 244
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+ A +F +L KK +F G+ +L F +++T T L
Sbjct: 245 KKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF---PSK 508
+ G + R+ + + L P ++ +E +++ KK D +F SK
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS--MKKSDAIKLFHVMKSK 361
Query: 509 GDFSEIMSILTGSQD-ANLDSHDTKIE--DEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
G + S +D S +T IE D+ D L P D +G+ +Q
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQP--DAAVYTCLITGFGTQKKL 418
Query: 566 PTPGQ---RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
T + +Q+KG D N + + + +++ + ++P +T+N
Sbjct: 419 DTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 623 IMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
IM S+ + A+ EM +K +CP D +Y ++I+GL G++ A L+ +L +
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDD-NSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
G ++ YN + G+ + + ++ K SG
Sbjct: 537 GMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N L L K S A KLF + G P +Y ++ F K+ A
Sbjct: 331 DIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 390
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + D A Y +I G G + D +L + ++G D YN LI +
Sbjct: 391 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
+ + + +M + I P + T+N +++ + A + M+ G P+ +
Sbjct: 451 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 510
Query: 761 TTL 763
T L
Sbjct: 511 TVL 513
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
L K L KL E FT P TY +++ + + EA I +M + DI
Sbjct: 278 LGKEAQVLFDKLKERFT-----PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDI 332
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+N++++GL + + A + + +G ++ Y +I K ++ ++F+
Sbjct: 333 VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 392
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M SG+ PD Y LI L Y+ LK M + G P+ T L
Sbjct: 393 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P + Y+ ++S KKG A + +EM C D + YN +I + D A A
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA--HLHTRDKAKA- 187
Query: 675 LDRLLKQGGYLD-----------IVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
L K GYLD +V YN L+ A ++G++D+VN F+ + S ++PDV
Sbjct: 188 ---LEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR--EIDKLRYQKASI 780
T+N +++ + K G++K+ L M C P+ +T + +D G+ E +K+ S+
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 781 LNEKDDPS 788
+ K+ P+
Sbjct: 305 MRSKEKPT 312
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N L F GK+ LF+ + V P YT+N +M ++ K G E A++T M
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
C DI T+N++I GK + L++ + +N++I GKA ID+
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
F++M P +TY +I ++ G + A
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 367
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV----KKGYFNEA 636
D + + +S+ KG+ +A LF +G P + YN+++++ + K +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 637 WAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
+ +M G + C ++ TYN++++ + G+ D +A+ L D+ +N +++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
A GK G I E+ +M+S+ PD++T+N LI+ + K + + K ++ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P TYN ++ +F + G ++ A+ ++ D+ T+N ++ GK G A+
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
L R+ DI+ +N LI++ GK +++ + F+ + S P + T+N++I + K
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVT 759
A ++ A K M D P+ +T
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFIT 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 13/296 (4%)
Query: 209 LLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG- 267
L L K+D L+ +VF + ++ + D Y+ I G G + LF +M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 268 ---PDLCTYNCLISV-------LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
PD YN LI+ L KV+ L + + C QP+ TY L++ +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC--QPNVVTYNILLRAFAQ 220
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+ K+D +F + + P +N ++D K + E + +M K T
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N+LI K E F L + + T++ +++
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKN 493
++ +T +++ G + + V E D V K A +E +N
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N + + K + + F+ + P T+NS++ ++ K ++A +
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + TY +I G G A I + + + L N ++ +
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
G E +K F + ++PD TY L + ++KA + + +K M G PN
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQM--PG----PDLCTYNCLISVLCKLG------- 284
D + YN I+A G+ + L QM PG PD TY LIS C+ G
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258
Query: 285 ----KVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
++ +A ++ ++ PD TY LI GCCKT +I A +F M G P
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQ--EGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+ YNS + ++ A ++ M + GV S TY LIH L++ R A L
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS-STYTPLIHALVETRRAAEARDLV 377
Query: 399 CDLKKKGQFVDGITYSII 416
++ + G TY ++
Sbjct: 378 VEMVEAGLVPREYTYKLV 395
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 255 LATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLN--ACAHQPDHFTYTTLI 312
LAT + + PD+ YN +I+ LC++G K A + + + + PD +TYT LI
Sbjct: 185 LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILI 244
Query: 313 QGCCK-----------TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
C+ ++ A R+F +M GF P + YN L+D K ++ A +
Sbjct: 245 SSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALE 304
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDG-ITYSIIV 417
LFE M +G + TYN I E A + +KK G V G TY+ ++
Sbjct: 305 LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+M ++G+ EA A M E C D+ YN II L ++G A +LD++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 683 GYL--DIVMYNTLINALGKAG-----------RIDEVNKFFEQMKSSGINPDVVTYNTLI 729
D Y LI++ + G R+ E N+ F +M G PDVVTYN LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ K + A + + M GC PN VT
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
++ G + + + +G + A F E P Y YN+I+++ + G
Sbjct: 156 RENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGN 215
Query: 633 FNEAWAIITEM---GEKLCPADIATYNMIIQGLGKIG-----------RADLASAILDRL 678
F +A ++ +M G + P D TY ++I + G R A+ + +
Sbjct: 216 FKKARFLLDQMQLPGFRY-PPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREM 274
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
L +G D+V YN LI+ K RI + FE MK+ G P+ VTYN+ I +S +
Sbjct: 275 LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEI 334
Query: 739 KDAYKFLKMMLDAG 752
+ A + ++ M G
Sbjct: 335 EGAIEMMRTMKKLG 348
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
CL+ L + G VK+AL + + +PD + Y T+I C+ A + +QM
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 334 NGFR--PGTIVYNSLLDVLFK-----------ATKVSEACQLFEKMAQEGVKASCQTYNI 380
GFR P T Y L+ + ++ EA ++F +M G TYN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
LI G K R A LF D+K KG + +TY+ +
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 238 DTWGYNICIHAF-------GCWGDLATSF----SLFHQM--PG--PDLCTYNCLISVLCK 282
DT+ Y I I ++ GC + +F +M G PD+ TYNCLI CK
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR-PGTI 341
++ AL ++ED+ P+ TY + I+ T +I+ A + M G PG+
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS 355
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
Y L+ L + + +EA L +M + G+ TY ++ L G
Sbjct: 356 TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 181/454 (39%), Gaps = 60/454 (13%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
+ + + F + + + +MP PD + CL+ LCK G VKDA ++ED+
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 298 ACAHQPDHFTY-TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
P + Y T+L+ G C+ K+ A + QM+ GF P + Y +LL A K+
Sbjct: 246 M--RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
++A L M + G + + Y +LI L K R E A +F ++++ Y
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER---------YEC- 353
Query: 417 VLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDL 476
D+VT T+L+ G K G+ D ++ + + L
Sbjct: 354 -------------------------EADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 477 VPKVLRWKAGMEASIKNPP-------SKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSH 529
+P L + M A K +K P G ++ ++ + +
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK---E 445
Query: 530 DTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDS-FDIDMVNT- 587
++ + E +E LSP +D + +G ASQ ++ + F + T
Sbjct: 446 AVRLWN-EMEENGLSPGVDTFVIMI--NGLASQGCLLEASDHFKEMVTRGLFSVSQYGTL 502
Query: 588 --FLSIFLAKGKLSLACKLFEIFTEAGVDPVSY-TYNSIMSSFVKKGYFNEAWAIITEMG 644
L+ L KL +A ++ T G ++ ++ + + KGY EA + EM
Sbjct: 503 KLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMI 562
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
E T+ +++GL K+ + A I +++
Sbjct: 563 EMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKV 596
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP---DLCTYNCLISVLCKLGKV 286
M K GF D + + + A G + + LF M +L + L+ C++GK+
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
+A V +N +PD YT L+ G K+ A + M GF P Y L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
+ L K ++ EA ++F +M + +A TY L+ G K G+ + Y + D+ KKG
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 407 FVDGITYSIIVL 418
+TY I++
Sbjct: 389 MPSELTYMHIMV 400
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 574 QKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
Q F+ D+V+ LS + GK++ A L G +P + Y ++ + K
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
EA + EM C AD+ TY ++ G K G+ D +LD ++K+G + Y
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
++ A K +E + E+M+ +PD+ YN +I + K G +K+A + M +
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 752 GCTP 755
G +P
Sbjct: 457 GLSP 460
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 137/349 (39%), Gaps = 30/349 (8%)
Query: 64 HFFNWCRSHHSSPLSPSAYSLILRSLSR-PAFXXXXXXXXXSIKQDAVVLHPQSFNPLLH 122
FF W S Y +++ LS+ F K++ ++ P+ F L+
Sbjct: 132 RFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQ 191
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPGCTP--LIYNSLLIASLRNNHIPLAFSIFLKLIE 180
+ + +++LD + + G P ++ LL A ++ + A +F +
Sbjct: 192 RFASADMVKKAIEVLD-----EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 246
Query: 181 LFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTW 240
F N F LL + +E + V + M++ GF D
Sbjct: 247 RFPV-----------------NLRYFTSLLYGWCRVGKMMEAKYVLVQ-MNEAGFEPDIV 288
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDL 296
Y + + G +A ++ L M P+ Y LI LCK+ ++++A+ V+ ++
Sbjct: 289 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 297 NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
+ D TYT L+ G CK KID + + M G P + Y ++ K
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
E +L EKM Q YN++I K G + A L+ ++++ G
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M ++GF + Y + I A + + +F +M D+ TY L+S CK GK
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+ IV +D+ P TY ++ K + + +M + P +YN
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
++ + K +V EA +L+ +M + G+ T+ I+I+GL G A F ++ +G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 406 QF 407
F
Sbjct: 493 LF 494
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTY-NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIAT 654
G + A KLFE PV+ Y S++ + + G EA ++ +M E DI
Sbjct: 232 GSVKDAAKLFEDMRMRF--PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD 289
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
Y ++ G G+ A +L + ++G + Y LI AL K R++E K F +M+
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
DVVTY L+ K G + Y L M+ G P+ +T
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
GK+ A + EAG +P Y +++S + G +A+ ++ +M + + Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
++IQ L K+ R + A + + + D+V Y L++ K G+ID+ + M
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
G+ P +TY ++ H K ++ + ++ M
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G +P Y + ++ + K G +A + +M + P ++ + ++ G ++G+ A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEA 271
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+L ++ + G DIV Y L++ AG++ + M+ G P+ Y LI+
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K +++A K M C + VT T L
Sbjct: 332 LCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPADIATY 655
++ A K+F + TY +++S F K G ++ + ++ +M +K L P+++ TY
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL-TY 395
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
I+ K + +++++ + + DI +YN +I K G + E + + +M+
Sbjct: 396 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+G++P V T+ +I + G L +A K M+ G
Sbjct: 456 NGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK-KGYFNEAWAI 639
DI + LS + GK++ A L + G +P Y ++ + + + +EA +
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
EM C ADI TY +I G K G D ++LD + K+G V Y ++ A K
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
+ +E + E+MK G +PD++ YN +I + K G +K+A + M G +P
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 4/255 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG---PDLCTYNCLISVLCKLGKV 286
M K G D + + + A G + + +F M P+L + L+ C+ GK+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
+A V + +PD +T L+ G K+ A + N M GF P Y L
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 347 LDVLFKATK-VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+ L + K + EA ++F +M + G +A TY LI G K G + Y++ D++KKG
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 406 QFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTD 465
+TY I++ RG DL+ ++ K G
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 466 RLMKHVREGDLVPKV 480
RL + L P V
Sbjct: 433 RLWNEMEANGLSPGV 447
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 26/305 (8%)
Query: 106 KQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRN 165
K + ++ P+ F L+ ++ + +++LD + ++ L+P ++ LL A +N
Sbjct: 159 KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP-KYGLEP--DEYVFGCLLDALCKN 215
Query: 166 NHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQV 225
+ A +F + E F N F LL + +E ++V
Sbjct: 216 GSVKEASKVFEDMREKFP-----------------PNLRYFTSLLYGWCREGKLMEAKEV 258
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLC 281
+ M + G D + + + G +A ++ L + M P++ Y LI LC
Sbjct: 259 LVQ-MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 282 KLGKVKD-ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
+ K D A+ V+ ++ + D TYT LI G CK ID + + M G P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+ Y ++ K + E +L EKM + G YN++I K G + A L+ +
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 401 LKKKG 405
++ G
Sbjct: 438 MEANG 442
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
+ N N ++ L ++ D E +VF + M++ G D Y I F WG
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMD---EAMRVFVE-MERYGCEADIVTYTALISGFCKWG 356
Query: 254 DLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+ +S+ M P TY ++ K + ++ L + E + PD Y
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+I+ CK ++ A R++N+M NG PG + +++ + EAC F++M
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 370 GVKASCQ--TYNILIHGLIKNGRPEAA 394
G+ ++ Q T L++ L+++ + E A
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
++ A ++F G + TY +++S F K G ++ ++++ +M +K TY
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 657 MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
I+ K + + +++++ ++G + D+++YN +I K G + E + + +M+++
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG--CTPNHVT-DTTLDYLGREIDKL 773
G++P V T+ +I + G L +A K M+ G P + T + L+ L R+ DKL
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD-DKL 500
Query: 774 RYQK 777
K
Sbjct: 501 EMAK 504
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+ +++ + + ++ + F + + A ++ + + G++P Y + ++ + K
Sbjct: 155 EEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCK 214
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G EA + +M EK P ++ + ++ G + G+ A +L ++ + G DIV+
Sbjct: 215 NGSVKEASKVFEDMREKF-PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 273
Query: 690 YNTLINALGKAG------------------------------------RIDEVNKFFEQM 713
+ L++ AG R+DE + F +M
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ G D+VTY LI K G++ Y L M G P+ VT
Sbjct: 334 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVT 379
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI +S F G + + + + GV P TY IM + KK F E +I
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + C D+ YN++I+ K+G A + + + G + + +IN
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQ 460
Query: 701 GRIDEVNKFFEQMKSSGI 718
G + E F++M S GI
Sbjct: 461 GFLIEACNHFKEMVSRGI 478
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 203 SIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
S +N ++ L K V ++ K ++T + I + AF + + +F
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMKAFAAAKERKKAVGIF 252
Query: 263 HQMPGPD----LCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
M + T NCL+ L + K+A ++++ L P+ TYT L+ G C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRV 311
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+ A RI+N M ++G +P + +N +L+ L ++ K S+A +LF M +G + ++Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
I+I K E A F D+ G D Y+ ++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
+D + +A N +L L ++ K + ++FH +M KG + Y I I F
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 255 LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ T+ F M PD Y CLI+ K+ + +++ H PD TY
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI+ +H TRI+N+M N P +N ++ F A ++++M ++G
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYS 414
+ +Y +LI GLI G+ A ++ KG I Y+
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 111/275 (40%), Gaps = 5/275 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + LL + +E ++++ ++D G D +N+ + + + L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 262 FHQM----PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
FH M P P++ +Y +I CK ++ A+ ++D+ QPD YT LI G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K+D + +M G P YN+L+ ++ +++ KM Q ++ S T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
+N+++ E ++ ++ KKG D +Y++++
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
+G L+ H+ G+ + + L + +
Sbjct: 536 DKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ TY L++ C++ + +A +W D+ +PD + +++G ++ K A ++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F+ M + G P Y ++ K + + A + F+ M G++ Y LI G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ + Y L ++++KG DG TY+ ++
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F + + A + F+ ++G+ P + Y +++ F + + + ++ EM EK P D
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TYN +I+ + + + I +++++ I +N ++ + A + ++
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 497
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+M GI PD +Y LI G ++A ++L+ MLD G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 160/396 (40%), Gaps = 19/396 (4%)
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
GF + YNS++ +L K + + E+M +G+ + +T+ I +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL 451
+ A +F +L KK +F G+ +L F +++T T L
Sbjct: 246 KKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 452 MVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMF---PSK 508
+ G + R+ + + L P ++ +E +++ KK D +F SK
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS--MKKSDAIKLFHVMKSK 362
Query: 509 GDFSEIMSILTGSQD-ANLDSHDTKIE--DEEGDEWSLSPHMDKLANQVKSSGYASQLFT 565
G + S +D S +T IE D+ D L P D +G+ +Q
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQP--DAAVYTCLITGFGTQKKL 419
Query: 566 PTPGQ---RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
T + +Q+KG D N + + + +++ + ++P +T+N
Sbjct: 420 DTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 623 IMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
IM S+ + A+ EM +K +CP D +Y ++I+GL G++ A L+ +L +
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDD-NSYTVLIRGLISEGKSREACRYLEEMLDK 537
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
G ++ YN + G+ + + ++ K SG
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
DI N L L K S A KLF + G P +Y ++ F K+ A
Sbjct: 332 DIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + D A Y +I G G + D +L + ++G D YN LI +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
+ + + +M + I P + T+N +++ + A + M+ G P+ +
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 511
Query: 761 TTL 763
T L
Sbjct: 512 TVL 514
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
L K L KL E FT P TY +++ + + EA I +M + DI
Sbjct: 279 LGKEAQVLFDKLKERFT-----PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDI 333
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
+N++++GL + + A + + +G ++ Y +I K ++ ++F+
Sbjct: 334 VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M SG+ PD Y LI L Y+ LK M + G P+ T L
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 27/320 (8%)
Query: 118 NPLLHSLIISHNFHETL---QILDYIQQRHLLQPGCTPLIY-----NSLLIASLRNNHIP 169
N + I++H F T + I Q HLL+ CT L +S L++ L +
Sbjct: 16 NSIRRCFILNHRFFSTELTPTTITPINQDHLLRV-CTILYQQQNSPDSRLVSKLSSTKFQ 74
Query: 170 LAFSIFLKLIELFXXXXXXXXXXAALDSNSNSN----SIAFNQLLVAL---RKADMKLEF 222
L FL++ F + + S N++L + R D+ E
Sbjct: 75 LTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWEL 134
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLIS 278
Q + K+G D + I + +L + FH M G ++ T N +
Sbjct: 135 AQE----IGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVE 189
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
LCK V++A V+ L +PD TY T+IQG C + A +++N M + GF
Sbjct: 190 TLCKEKLVEEAKFVFIKLKEFI-KPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDV 248
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKM-AQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
+++ L K + EA ++F M ++ G Y ++I L KNGR + A +
Sbjct: 249 DIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKV 308
Query: 398 FCDLKKKGQFVDGITYSIIV 417
F +++++G +VD +T++ ++
Sbjct: 309 FDEMRERGVYVDNLTWASLI 328
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA----WAIIT 641
T + F G L A KL+ + + G D IM + +KK F+EA + +++
Sbjct: 219 RTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVS 278
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+ G L D Y ++I L K GR D+A + D + ++G Y+D + + +LI L
Sbjct: 279 KRGGDL---DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
R+ E E ++ NPD+ Y+ LI+ K +A + + M+ GC P
Sbjct: 336 RVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEP 385
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
Y +I LCK G++ A V++++ D+ T+ +LI G ++ A + +
Sbjct: 289 YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE 348
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG-LIKNGR 390
N P +Y+ L+ L K + SEA ++F KM Q G + TY +L+ G L + GR
Sbjct: 349 N----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGR 403
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
+L +Y+ +IS LCK G+V+++ +++ PD Y LI+ CCK I A +++
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
++M G + YN L+ L + + E+ +LF+KM + G++ Y LI GL K
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 389 GRPEAAYTLF 398
+ EAA +F
Sbjct: 516 TKIEAAMEVF 525
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCK 282
++L+ KG+ + Y++ I G + S++ +M PD+ YN LI CK
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
++ A +W+++ + + TY LI+ + + + + R+F++M G P +
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 343 YNSLLDVLFKATKVSEACQLFEK-MAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
Y SL++ L K TK+ A ++F K M ++ + + + + L NG A L
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
K +E+ + G +Y+ ++S K G E++ + EM ++ D++ YN +I+
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
K A + D + +G +++ YN LI L + G +E + F++M GI PD
Sbjct: 443 CKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
Y +LIE K ++ A + + ++
Sbjct: 503 TIYMSLIEGLCKETKIEAAMEVFRKCME 530
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 254 DLATSFSLFHQMPG--PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTL 311
D A F ++ G P + T + L LC+ K + +E L++ + + +Y+ +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
I CK ++ + +M G P +YN+L++ KA + A +L+++M EG
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
K + TYN+LI L + G E + LF + ++G D Y
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
KGYF+E + +Y+++I L K GR + L + K+G D+ +
Sbjct: 391 KGYFSE----------------LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSL 434
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
YN LI A KA I K +++M G ++ TYN LI S+ G +++ + ML
Sbjct: 435 YNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKML 494
Query: 750 DAGCTPNHVTDTTL 763
+ G P+ +L
Sbjct: 495 ERGIEPDETIYMSL 508
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/503 (18%), Positives = 186/503 (36%), Gaps = 76/503 (15%)
Query: 234 GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGKVKDA 289
G++ D+ Y+ + + +LF Q+ D Y LI L K + A
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 290 LIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDV 349
V E+ + + L+ G D+A ++F +M + G T+ + +
Sbjct: 137 FWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGW 196
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILI-HGLIKNGRPEAAYTLFCDLKKKGQFV 408
++++ ++ +L +++ + + + +LI H L K R A+ + +L+
Sbjct: 197 FCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKP 256
Query: 409 DGITYSIIVL----------QXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSL-----MV 453
D + Y +I + R F++DL++ L +
Sbjct: 257 DFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVA 316
Query: 454 GIHKHGRW----DWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKG 509
+ G++ D D L+ V D P ++ S G
Sbjct: 317 EVIVSGKFPMDNDILDALIGSVSAVD-------------------PDSAVEFLVYMVSTG 357
Query: 510 DFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPG 569
I ++ S+ NL HD S H+ K + S GY S+L
Sbjct: 358 KLPAIRTLSKLSK--NLCRHDK------------SDHLIKAYELLSSKGYFSEL------ 397
Query: 570 QRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
S+ + +S G++ + + + G+ P YN+++ + K
Sbjct: 398 --------QSYSL-----MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
A + EM + C ++ TYN++I+ L + G A+ + + D++L++G D +
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 690 YNTLINALGKAGRIDEVNKFFEQ 712
Y +LI L K +I+ + F +
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRK 527
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
PA I T + + + L + ++D + L +G + ++ Y+ +I+ L KAGR+ E
Sbjct: 360 PA-IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYT 418
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
++MK G+ PDV YN LIE KA +++ A K M GC N T L
Sbjct: 419 ALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVL 473
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 215/524 (41%), Gaps = 34/524 (6%)
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
G +A + +F M +L T++ +I + + ++ ++ + PD F + ++
Sbjct: 129 GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
QGC ++ I + + G V NS+L V K ++ A + F +M + V
Sbjct: 189 QGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI 248
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
A +N ++ +NG+ E A L +++K+G +T++I++
Sbjct: 249 A----WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 433 XXXXXXRGFVVDLVTITSLMVG-IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
G D+ T T+++ G IH R+ D K G +VP + + + A
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG-VVPNAVTIMSAVSACS 363
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIED--------EEGDEWSL 543
+ K F I +L G+ ++ S K+ED + D ++
Sbjct: 364 CLKVINQGSEVHSIAVKMGF--IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTW 421
Query: 544 SPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACK 603
+ + Q G A +LFT Q + +I NT +S ++ G A
Sbjct: 422 NSMITGYC-QAGYCGKAYELFTR------MQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 604 LFEIFTEAG-VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG-EKLCPADIATYNMIIQG 661
LF+ + G V + T+N I++ +++ G +EA + +M + P + +++
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIV--MYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
+G A + I +L++ LD + + N L + K+G I+ F M++
Sbjct: 535 ANLLG-AKMVREIHGCVLRRN--LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK--- 588
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
D++T+N+LI + G A M G TPN T +++
Sbjct: 589 -DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/604 (20%), Positives = 230/604 (38%), Gaps = 54/604 (8%)
Query: 177 KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFA 236
KL+ ++ DS N ++ ++ A + + E ++F +LM K G
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF-RLMMKDGVL 178
Query: 237 LDTWGYNICIHAFGCWGDLATSFSLFHQMP---GPDLC--TYNCLISVLCKLGKVKDALI 291
D + + + GD+ + H + G C N +++V K G++ A
Sbjct: 179 PDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 292 VWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLF 351
+ + + D + +++ C+ K + A + +M G PG + +N L+
Sbjct: 238 FFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
+ K A L +KM G+ A T+ +I GLI NG A +F + G + +
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
T V GF+ D++ SL+ K G+ + ++ V
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 472 REGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSH-- 529
+ D V W + + + G + + T QDANL +
Sbjct: 414 KNKD----VYTWNSMITG---------------YCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 530 --DTKI-----EDEEGDEWSLSPHMDKLANQVKSSG-----YASQLFTPTPGQRVQQKGS 577
+T I +EG+ L M+K +++ A + + ++
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 578 DSFDIDMVN--TFLSIFLAKGKLSLACKLFEI---FTEAGVDPVSYTYNSIMSSFVKKGY 632
F M N T LS+ A L A + EI +D + N++ ++ K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNT 692
+ I M K DI T+N +I G G A A+ +++ QG + ++
Sbjct: 575 IEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 693 LINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
+I A G G +DE K F + + I P + + ++ ++ +A L++A +F++ M
Sbjct: 631 IILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQ 690
Query: 752 GCTP 755
TP
Sbjct: 691 SETP 694
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI---ITEMGEKLCPADIATYNMII 659
KLF + + GV P + + I+ G I + ++G C + N I+
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC---LRVSNSIL 223
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
K G D A+ R+ ++ D++ +N+++ A + G+ +E + ++M+ GI+
Sbjct: 224 AVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQ 776
P +VT+N LI +++ G A ++ M G T + T T + G + +RYQ
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM-ISGLIHNGMRYQ 335
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 233 KGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIV 292
KGF D + Y + FG G + + +S+FH M K K LI
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLM-------------------KEKGVLI- 155
Query: 293 WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
D TYT+LI + +D A R++ +M +NG P + Y + + +LF
Sbjct: 156 -----------DTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFA 204
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
+V EA +++++M + V +C TY +L+ L+ G+ E A +F +++ G D
Sbjct: 205 DGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAA 264
Query: 413 YSIIV 417
+I++
Sbjct: 265 CNILI 269
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
VFH LM +KG +DT Y IH GD+ + L+ +M P + +Y + +L
Sbjct: 144 VFH-LMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKML 202
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
G+V++A V++++ P+ TYT L++ T K + A IF +M G +P
Sbjct: 203 FADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDK 262
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
N L+ K + S ++ M + GV Y I + L
Sbjct: 263 AACNILIAKALKFGETSFMTRVLVYMKENGV---VLRYPIFVEAL 304
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
TY ++ G+ GR ++ + ++G +D V Y +LI+ + +G +D + +E+M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYL 766
+ +G P VV+Y +++ G +++A + K ML + +PN H ++YL
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+TY +++ F + G +++ M EK D TY +I + G D A + +
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ G +V Y + L GR++E + +++M S ++P+ TY L+E G
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 738 LKDAYKFLKMMLDAGCTPN 756
++A M + G P+
Sbjct: 243 CEEALDIFFKMQEIGVQPD 261
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 135/329 (41%), Gaps = 26/329 (7%)
Query: 74 SSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHET 133
S LSP+ +L+ LS Q ++N L+ SL F
Sbjct: 89 SVKLSPALIEEVLKKLSNAGVLALSVFKWAE-NQKGFKHTTSNYNALIESLGKIKQFKLI 147
Query: 134 LQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXA 193
++D ++ + LL LI R + A F K+ E
Sbjct: 148 WSLVDDMKAKKLLSKETFALISRRYA----RARKVKEAIGAFHKMEEF------------ 191
Query: 194 ALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWG 253
S FN++L L K+ + Q+VF K M KK F D Y I + +G
Sbjct: 192 ----GFKMESSDFNRMLDTLSKSRNVGDAQKVFDK-MKKKRFEPDIKSYTILLEGWGQEL 246
Query: 254 DLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
+L + +M PD+ Y +I+ CK K ++A+ + ++ +P +
Sbjct: 247 NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFC 306
Query: 310 TLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
+LI G K++ A F + ++GF YN+L+ + ++ +A + ++M +
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLF 398
GV + +TY+I++H LI+ R + AY ++
Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVY 395
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 234 GFALDTWGYNICIHAFGCWGD-LATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKD 288
GF L+ YN + A+ CW + ++ +M GP+ TY+ ++ L ++ + K+
Sbjct: 332 GFPLEAPTYNALVGAY-CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
A V++ ++ +P TY +++ C ++D A +I+++M G PG +++SL+
Sbjct: 391 AYEVYQTMSC---EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC--DLKKKGQ 406
L K+ EAC+ F +M G++ ++ L L+ GR + L D +K Q
Sbjct: 448 ALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQ 507
Query: 407 FV 408
V
Sbjct: 508 LV 509
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVL 280
FHK M++ GF +++ +N + ++ + +F +M PD+ +Y L+
Sbjct: 184 AFHK-MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW 242
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
+ + V ++ +PD Y +I CK K + A R FN+M +P
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
++ SL++ L K+++A + FE+ G TYN L+ + R E AY +
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE 362
Query: 401 LKKKGQFVDGITYSIIV 417
++ KG + TY II+
Sbjct: 363 MRLKGVGPNARTYDIIL 379
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T+ I + + EA +M E + + +N ++ L K A + D++
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 679 LKQGGYLDIVMYNTLINALGKAG---RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
K+ DI Y L+ G+ R+DEVN+ +MK G PDVV Y +I H KA
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNR---EMKDEGFEPDVVAYGIIINAHCKA 280
Query: 736 GLLKDAYKFLKMMLDAGCTPN-HVTDTTLDYLGRE 769
++A +F M C P+ H+ + ++ LG E
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 44/212 (20%)
Query: 597 KLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYN 656
K+ A F E G S +N ++ + K +A + +M +K DI +Y
Sbjct: 177 KVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYT 236
Query: 657 MIIQGLGK---IGRADLASAILDRLLKQGGYL-DIVMYN--------------------- 691
++++G G+ + R D ++R +K G+ D+V Y
Sbjct: 237 ILLEGWGQELNLLRVDE----VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 692 --------------TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+LIN LG ++++ +FFE+ KSSG + TYN L+ + +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 738 LKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
++DAYK + M G PN T D L +L R
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
+ G +P Y I+++ K + EA EM ++ C + +I GLG + +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
A +R G L+ YN L+ A + R+++ K ++M+ G+ P+ TY+ ++
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 730 EVHSKAGLLKDAYKFLKMMLDAGCTP 755
+ K+AY+ + M C P
Sbjct: 380 HHLIRMQRSKEAYEVYQTM---SCEP 402
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + + ++ A K + GV P + TY+ I+ ++ EA+ + M
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS- 399
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
C ++TY ++++ R D+A I D + +G + M+++LI AL ++DE
Sbjct: 400 --CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 706 VNKFFEQMKSSGINP 720
++F +M GI P
Sbjct: 458 ACEYFNEMLDVGIRP 472
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 273 YNCLISVLCKLGKVKDALIVW---EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFN 329
YN LI LGK+K ++W +D+ A T+ + + + K+ A F+
Sbjct: 131 YNALIE---SLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFH 186
Query: 330 QMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
+M GF+ + +N +LD L K+ V +A ++F+KM ++ + ++Y IL+ G +
Sbjct: 187 KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQEL 246
Query: 390 RPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ ++K +G D + Y II+
Sbjct: 247 NLLRVDEVNREMKDEGFEPDVVAYGIII 274
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 594 AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIA 653
++ KL+ A + FE +G + TYN+++ ++ +A+ + EM K +
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
TY++I+ L ++ R+ A + + + + Y ++ R+D K +++M
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
K G+ P + +++LI L +A ++ MLD G P
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII-TEMGEKLCP--ADI 652
GK + A +F +G +P + TY I+ +FV+ F EA + T + EK P D
Sbjct: 188 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 247
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
Y+M+I K G + A + ++ +G V YN+L++ EV+K ++Q
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQ 304
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
M+ S I PDVV+Y LI+ + +A ++A + MLDAG P H
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D M + + ++ G A K+F GV + TYNS+MS + + E I
Sbjct: 246 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIY 302
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M D+ +Y ++I+ G+ R + A ++ + +L G YN L++A +
Sbjct: 303 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G +++ F+ M+ I PD+ +Y T++ + A ++ A KF K + G PN VT
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 761 TTL 763
TL
Sbjct: 423 GTL 425
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL--DTWGYNICIHAFGCWGD 254
S ++I + +L + D E ++VF L+D+K L D Y++ I+ + G+
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 255 LATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ +F M G + TYN L+S +V +++ + QPD +Y
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYAL 319
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI+ + + + A +F +M + G RP YN LLD + V +A +F+ M ++
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ +Y ++ + E A F +K G + +TY ++
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 39/268 (14%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLG 284
++ K G + Y + ++G G + ++F +M P P TY ++ +
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 285 KVKDALIVWE---DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K K+A V+E D +PD Y +I K + A ++F+ M G T+
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 342 VYNSLL-----------------------DVLF---------KATKVSEACQLFEKMAQE 369
YNSL+ DV+ +A + EA +FE+M
Sbjct: 284 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
GV+ + + YNIL+ +G E A T+F +++ F D +Y+ ++
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHK 457
GF ++VT +L+ G K
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M + D Y + I A+G + S+F +M P YN L+ G
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V+ A V++ + PD ++YTT++ ++ A + F ++ +GF P + Y +
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKAS 374
L+ KA V + +++EKM G+KA+
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S+ + +++ L+ A +A + E VF +++D G YNI + AF G +
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVE 366
Query: 257 TSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+ ++F M PDL +Y ++S ++ A ++ + +P+ TY TLI
Sbjct: 367 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
+G K ++ ++ +M +G + + +++D + A +++M GV
Sbjct: 427 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 486
Query: 373 ASCQTYNILI 382
+ N+L+
Sbjct: 487 PDQKAKNVLL 496
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A +FE +AGV P YN ++ +F G +A + M D+ +Y ++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
+ A R+ G +IV Y TLI KA ++++ + +E+M+ SGI
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQK--A 778
+ T+++ + A + K M G P+ L L D+L K
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 512
Query: 779 SILNE 783
I NE
Sbjct: 513 GIRNE 517
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
LI+ KLG A V L+ P+ +YT L++ + K ++A IF +M ++G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG---VKASCQTYNILIHGLIKNGRPE 392
P I Y +L + K EA ++FE + E +K + Y+++I+ K G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 393 AAYTLFCDLKKKGQFVDGITYS 414
A +F + KG +TY+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYN 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 637 WAIITEMGEKLCPADIATYN-----MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
W +++E+ E L + ++ M+I GK+G + A +L L K G +++ Y
Sbjct: 119 WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYT 178
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
L+ + G+ G+ + F +M+SSG P +TY +++ + K+A + + +LD
Sbjct: 179 ALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE 238
Query: 752 GCTP 755
+P
Sbjct: 239 KKSP 242
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+++++ K G FN A +++ + + ++ +Y +++ G+ G+ + A AI R+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQM---KSSGINPDVVTYNTLIEVHSKAGLLK 739
+ Y ++ + + E + FE + K S + PD Y+ +I ++ KAG +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
A K M+ G + VT +L
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSL 288
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVL 280
VF+K++ K+ ++ + + + G+ + ++ LF + D YN L
Sbjct: 348 VFNKMLKKRK-RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
KLGKV++A+ ++ ++ PD YTTLI GCC K A + +M G P
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
++YN L L EA + + M GVK + T+N++I GLI G + A +
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 401 LKKKGQ 406
L+ K +
Sbjct: 527 LEHKSR 532
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
+SI+ + + G F+EA+ + E E D YN+ LGK+G+ + A + +
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
+G D++ Y TLI G+ + +M +G PD+V YN L + GL ++
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQE 484
Query: 741 AYKFLKMMLDAGCTPNHVT 759
A++ LKMM + G P +VT
Sbjct: 485 AFETLKMMENRGVKPTYVT 503
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVW 293
D Y I I+ + DL ++LF M PD+ TY L+ K K +
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-------KNKPERNLS 749
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
++ A +PD F YT LI CK + A RIF+QM +G P Y +L+ K
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+ EA +F++M + GVK Y LI G +NG A L ++ +KG
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 182/480 (37%), Gaps = 29/480 (6%)
Query: 294 EDLNACAHQPD-HFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
D N + D Y +++G C +I+ A + M +G P VY+++++ K
Sbjct: 279 RDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK 338
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
+ +A +F KM ++ + +C + ++ + G AY LF + ++ +D +
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
Y++ +G D++ T+L+ G G+ LM +
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKK-DYSPMFPSKGDFSEIMS---ILTGSQDA-NLD 527
P ++ + N +++ + M ++G ++ ++ G DA LD
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 528 SHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFT----PTPGQRVQQKGSDSFDID 583
+ E E M K +A + F P P S F +
Sbjct: 519 KAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPK-------SVYFTL- 570
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
F S+ K +S A L + + GV+P Y ++ ++ + +A +
Sbjct: 571 ----FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
K D+ TY ++I ++ A A+ + + ++ D+V Y+ L+N+
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------- 679
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
D +M++ + PDVV Y +I + LK Y K M P+ VT T L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 27/265 (10%)
Query: 142 QRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
++H + P +Y++++ +N +IP A +F K+ L
Sbjct: 318 EKHGIDPDV--YVYSAIIEGHRKNMNIPKAVDVFNKM----------------LKKRKRI 359
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + + +L + E +F + + +LD YN+ A G G + + L
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRE-TNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
F +M G PD+ Y LI C GK DA + +++ PD Y L G
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
A M N G +P + +N +++ L A ++ +A +E + + +
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS- 537
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLK 402
++ G G + A+ F L+
Sbjct: 538 ---MVKGFCAAGCLDHAFERFIRLE 559
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
Y ++ LC +++DA V D+ PD + Y+ +I+G K I A +FN+M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
R ++ +S+L + SEA LF++ + + YN+ L K G+
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 392 EAAYTLFCDLKKKGQFVDGITYSIIV 417
E A LF ++ KG D I Y+ ++
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLI 438
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
D+ Y ++I KIG A I D++++ G D Y LI K G + E F
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREI 770
++M SG+ PDVV Y LI + G + A K +K ML+ G P + + + Y +
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKA 879
Query: 771 DKLR 774
LR
Sbjct: 880 KGLR 883
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ Y LI CK+G + +A +++ + PD YT LI CCK + A I
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
F++M +G +P + Y +L+ + V +A +L ++M ++G+K +
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 100/521 (19%), Positives = 185/521 (35%), Gaps = 119/521 (22%)
Query: 196 DSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL 255
++N + + + +N AL K E ++F + M KG A D Y I G
Sbjct: 389 ETNISLDRVCYNVAFDALGKLGKVEEAIELFRE-MTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 256 ATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY--- 308
+ +F L +M G PD+ YN L L G ++A + + +P + T+
Sbjct: 448 SDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 309 ----------------------------TTLIQGCCKTYKIDHATRIF------------ 328
++++G C +DHA F
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 329 ---------------------NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
++M G P +Y L+ + V +A + FE +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXX 427
+ + TY I+I+ + P+ AY LF D+K++ D +TYS+++
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL---------N 678
Query: 428 XXXXXXXXXXXRGF-VVDLVTITSLMVGIHKH-GRWDWTDRLMKHVREGDLVPKVLRWKA 485
F V+ V ++M+ + H L K ++ ++VP V+ +
Sbjct: 679 SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT- 737
Query: 486 GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSP 545
+KN P + NL S + K D + D + +
Sbjct: 738 ---VLLKNKPER---------------------------NL-SREMKAFDVKPDVFYYTV 766
Query: 546 HMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF 605
+D ++ G A ++F ++ + G D D ++ G L A +F
Sbjct: 767 LID-WQCKIGDLGEAKRIF-----DQMIESGVDP-DAAPYTALIACCCKMGYLKEAKMIF 819
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
+ E+GV P Y ++++ + G+ +A ++ EM EK
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 112/274 (40%), Gaps = 18/274 (6%)
Query: 156 NSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIA-FNQLLVALR 214
+ LLI+ RN P F +L IE L ++N + + L +A R
Sbjct: 241 SRLLISETRN---PCVF--YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYR 295
Query: 215 KA------DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP 268
K +M++E + M+K G D + Y+ I ++ + +F++M
Sbjct: 296 KVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Query: 269 DLCTYNCLI--SVL---CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
NC+I S+L C++G +A ++++ D Y K K++
Sbjct: 356 RK-RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEE 414
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A +F +M G P I Y +L+ K S+A L +M G YN+L
Sbjct: 415 AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
GL NG + A+ ++ +G +T+++++
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI 508
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII-TEMGEKLCP--ADI 652
GK + A +F +G +P + TY I+ +FV+ F EA + T + EK P D
Sbjct: 195 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 254
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
Y+M+I K G + A + ++ +G V YN+L++ EV+K ++Q
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQ 311
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
M+ S I PDVV+Y LI+ + +A ++A + MLDAG P H
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D M + + ++ G A K+F GV + TYNS+MS + + E I
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIY 309
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M D+ +Y ++I+ G+ R + A ++ + +L G YN L++A +
Sbjct: 310 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTD 760
G +++ F+ M+ I PD+ +Y T++ + A ++ A KF K + G PN VT
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 761 TTL 763
TL
Sbjct: 430 GTL 432
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL--DTWGYNICIHAFGCWGD 254
S ++I + +L + D E ++VF L+D+K L D Y++ I+ + G+
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 255 LATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTT 310
+ +F M G + TYN L+S +V +++ + QPD +Y
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYAL 326
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI+ + + + A +F +M + G RP YN LLD + V +A +F+ M ++
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ +Y ++ + E A F +K G + +TY ++
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 39/268 (14%)
Query: 229 LMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLG 284
++ K G + Y + ++G G + ++F +M P P TY ++ +
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 285 KVKDALIVWE---DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
K K+A V+E D +PD Y +I K + A ++F+ M G T+
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 342 VYNSLL-----------------------DVLF---------KATKVSEACQLFEKMAQE 369
YNSL+ DV+ +A + EA +FE+M
Sbjct: 291 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 370 GVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXX 429
GV+ + + YNIL+ +G E A T+F +++ F D +Y+ ++
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 430 XXXXXXXXXRGFVVDLVTITSLMVGIHK 457
GF ++VT +L+ G K
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M + D Y + I A+G + S+F +M P YN L+ G
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V+ A V++ + PD ++YTT++ ++ A + F ++ +GF P + Y +
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKAS 374
L+ KA V + +++EKM G+KA+
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A +FE +AGV P YN ++ +F G +A + M D+ +Y ++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
+ A R+ G +IV Y TLI KA ++++ + +E+M+ SGI
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQK--A 778
+ T+++ + A + K M G P+ L L D+L K
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 519
Query: 779 SILNE 783
I NE
Sbjct: 520 GIRNE 524
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S+ + +++ L+ A +A + E VF +++D G YNI + AF G +
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVE 373
Query: 257 TSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+ ++F M PDL +Y ++S ++ A ++ + +P+ TY TLI
Sbjct: 374 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
+G K ++ ++ +M +G + + +++D + A +++M GV
Sbjct: 434 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 493
Query: 373 ASCQTYNILI 382
+ N+L+
Sbjct: 494 PDQKAKNVLL 503
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
LI+ KLG A V L+ P+ +YT L++ + K ++A IF +M ++G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG---VKASCQTYNILIHGLIKNGRPE 392
P I Y +L + K EA ++FE + E +K + Y+++I+ K G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 393 AAYTLFCDLKKKGQFVDGITYS 414
A +F + KG +TY+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYN 293
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 637 WAIITEMGEKLCPADIATYN-----MIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
W +++E+ E L + ++ M+I GK+G + A +L L K G +++ Y
Sbjct: 126 WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYT 185
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
L+ + G+ G+ + F +M+SSG P +TY +++ + K+A + + +LD
Sbjct: 186 ALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE 245
Query: 752 GCTP 755
+P
Sbjct: 246 KKSP 249
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+++++ K G FN A +++ + + ++ +Y +++ G+ G+ + A AI R+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQM---KSSGINPDVVTYNTLIEVHSKAGLLK 739
+ Y ++ + + E + FE + K S + PD Y+ +I ++ KAG +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 740 DAYKFLKMMLDAGCTPNHVTDTTL 763
A K M+ G + VT +L
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSL 295
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKL 283
K+M + +DT GYNI IH G + ++F + PD+ TYN +I L
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSL 61
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G+ + ++ ++ PD TY ++I G CK K+ A ++ +
Sbjct: 62 GRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTF 109
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
N+L++ KAT+V + LF +M + G+ A+ TY LIHG + G A +F ++
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 404 KGQFVDGITYSIIVLQ 419
G + IT+ I+ Q
Sbjct: 170 NGVYSSSITFRDILPQ 185
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG 663
+F++ E+ +D + YN I+ K G F+EA I T + D+ TYNM+I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 664 KIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVV 723
+GRA+ A ++++G D + YN++I+ L K ++ + K ++
Sbjct: 60 SLGRAEKLYA---EMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREI 770
T+NTLI + KA +KD M G N +T TTL + R++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV 154
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
+V ++ + D N + GK A +F +G+ P TYN +M F
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFSSL 61
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
G + +A + G L P D TYN +I GL K + A + +
Sbjct: 62 GRAEKLYAEMIRRG--LVP-DTITYNSMIHGLCKQNKLAQARKVSK---------SCSTF 109
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
NTLIN KA R+ + F +M GI +V+TY TLI + G A + M+
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 751 AGCTPNHVT 759
G + +T
Sbjct: 170 NGVYSSSIT 178
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 221 EFQQVFHKLMDKKGFALDTWGYNIC--IHAFGCWGDLATSFSLFHQMPGPDLC-----TY 273
+++ ++ L K +LD G +C I +G G + + LF+ +P C Y
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 274 NCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN 333
N L+ LC + A + + +PD TY L+ G C K+ A ++M
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
GF P + L++ L A + A ++ KM + G QT+NILI + K+G E
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 394 AYTLFCDLKKKGQFVDGITYSIIV 417
++ K G VD TY ++
Sbjct: 306 CIEMYYTACKLGLCVDIDTYKTLI 329
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 594 AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIA 653
+ GK+ A + + + G +P + + ++ + GY A ++++M + DI
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
T+N++I+ + K G + + K G +DI Y TLI A+ K G+IDE +
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G P Y +I+ + G+ DA+ F M PN T L
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTML 398
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 147/377 (38%), Gaps = 30/377 (7%)
Query: 43 LTEPVILQILSNPTLHPSHKLHFFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXX 102
+T + ++L + + L FFNW RS+ S + Y + +SL+
Sbjct: 75 VTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKIL 134
Query: 103 XSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGC--TPLIYNSLLI 160
+K ++ + ++ ++ + + + +++ + + + GC T +YNSLL
Sbjct: 135 KQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPK----TLGCQQTVDVYNSLLH 190
Query: 161 ASLRNNHIPLAFSIFLKLIEL---------------FXXXXXXXXXXAALDSNS----NS 201
A A+++ ++I + LD S N
Sbjct: 191 ALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNP 250
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ + L+ L A +++ K M K GF D +NI I A G++ +
Sbjct: 251 PARGRDLLIEGLLNAGYLESAKEMVSK-MTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 262 FHQMPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
++ LC TY LI + K+GK+ +A + + H+P Y +I+G C+
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR 369
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
D A F+ M P VY L+ + + K +A +M + G+ +
Sbjct: 370 NGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRC 429
Query: 378 YNILIHGLIKNGRPEAA 394
++++ GL G+ + A
Sbjct: 430 FDMVTDGLKNGGKHDLA 446
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG---YFNEAWAIITEMGEKLC 648
L G L A ++ T+ G P T+N ++ + K G + E + ++G LC
Sbjct: 262 LLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG--LC 319
Query: 649 PADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNK 708
DI TY +I + KIG+ D A +L+ ++ G +Y +I + + G D+
Sbjct: 320 -VDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFS 378
Query: 709 FFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
FF MK P+ Y LI + + G DA +L M + G P
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQG 661
K+ + + +D T I+ + K G+ ++A + + + L C + YN ++
Sbjct: 132 KILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHA 191
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
L + A A++ R++++G D Y L+N AG++ E +F ++M G NP
Sbjct: 192 LCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPP 251
Query: 722 VVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ LIE AG L+ A + + M G P+
Sbjct: 252 ARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
YN +HA +++L +M PD TY L++ C GK+K+A ++++
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
P LI+G ++ A + ++M GF P +N L++ + K+ +V
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
+++ + G+ TY LI + K G+ + A+ L + + G
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 123/597 (20%), Positives = 234/597 (39%), Gaps = 70/597 (11%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLIS 278
+L F H+ + GF+ D + + ++ + +G LA + +F +M D+ + +I
Sbjct: 61 RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIG 120
Query: 279 VLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
+ G V +A + ++ +P T ++ G + ++ F ++ GF
Sbjct: 121 CYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL-QCLHDFAVIY--GFDC 177
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
V NS+L++ K V +A LF++M Q + ++N +I G G L
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV----SWNTMISGYASVGNMSEILKLL 233
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
++ G D T+ + GF VD+ T+L+ K
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKK--DYSPMFPSKGDFSE--I 514
G+ + + R+++ + D+V W + ++ ++K +S M S D S I
Sbjct: 294 GKEEASYRVLETIPNKDVVC----WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Query: 515 MSILT-----GSQDANLDSH----------DTKIEDEEGDEWSLSPHMDK---------- 549
S++ GS D H DT + ++ H+DK
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE 409
Query: 550 ---LANQVKSSGYASQ--------LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKL 598
++ SGYA LF + VQQ DSF V + L + G L
Sbjct: 410 RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ--VDSFT---VVSLLQACSSAGAL 464
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
+ + I + + P S +++ + K GY A + K D+ ++ ++
Sbjct: 465 PVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK----DVVSWGIL 520
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-KSSG 717
I G G G+ D+A I L G + V++ ++++ G + + K F M + G
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFG 580
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLR 774
+ P+ ++++ +A ++DA+KF K + T ++D LG +D R
Sbjct: 581 VEPNHEHLACVVDLLCRAKRIEDAFKFYK---------ENFTRPSIDVLGIILDACR 628
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/612 (18%), Positives = 245/612 (40%), Gaps = 82/612 (13%)
Query: 155 YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALR 214
+N+++ +LRN + F +F ++ F +S ++ +L A
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGF----------------QKPDSYTYSSVLAACA 262
Query: 215 KADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYN 274
+ KL F +V + K G A D + + + G +A + +F ++P P + ++
Sbjct: 263 SLE-KLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
++S K AL +++++ + ++ T T++I C + + A+++ + +
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
GF + V +L+ + K+ + + Q+FE + + N++I ++ +P A
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQ---NIVNVMITSFSQSKKPGKA 437
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
LF + ++G D +S+ L G V+DL +SL
Sbjct: 438 IRLFTRMLQEGLRTD--EFSVCSL-LSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTL 494
Query: 455 IHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
K G + + +L + + D A + S +Y + + G FSE+
Sbjct: 495 YSKCGSLEESYKLFQGIPFKD------------NACWASMISGFNEYGYLREAIGLFSEM 542
Query: 515 MSILTGSQDANL-------DSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPT 567
+ T ++ L SH + +E ++L +DK
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK------------------ 584
Query: 568 PGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
+D+ + ++++ G L LA ++++ E +DPVS + S++S +
Sbjct: 585 -------------GMDLGSALVNMYSKCGSLKLARQVYDRLPE--LDPVSCS--SLISGY 627
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI 687
+ G + + + +M D + I++ + L + + + K G +
Sbjct: 628 SQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEP 687
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ ++L+ K G ID+ K F Q+ PD++ + LI +++ G +A + +
Sbjct: 688 SVGSSLLTMYSKFGSIDDCCKAFSQIN----GPDLIAWTALIASYAQHGKANEALQVYNL 743
Query: 748 MLDAGCTPNHVT 759
M + G P+ VT
Sbjct: 744 MKEKGFKPDKVT 755
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVK 287
K+G + Y I F G+ A + H M P + Y +I LC K
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
+A ++++L + PD YTT+I+G C+ + A +++ +M G RP YN ++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
FK ++S + +M + G + + N +I G +G+ + A+ +F ++ + G
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 408 VDGITYSIIV 417
+ ITY+ ++
Sbjct: 421 PNAITYNALI 430
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 267 GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
PD Y +I C+ G + A +W ++ +P+ F Y +I G K +I
Sbjct: 315 APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEA 374
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+N+M NG+ + N+++ K EA ++F+ M++ GV + TYN LI G
Sbjct: 375 FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K + E L+ +LK G G+ Y+ +V
Sbjct: 435 KENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 593 LAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI 652
+ K +L C +F+ + G P Y +++ F +KG+ A + EM +K +
Sbjct: 295 MNKKQLEAYC-IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNE 353
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
YN++I G K G L A + +L+ G ++ NT+I G+ DE + F+
Sbjct: 354 FAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 713 MKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
M +G+ P+ +TYN LI+ K ++ K K + G P+ + L
Sbjct: 414 MSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+ +++ L +LE +F L DK G+A D Y I F G L ++ L+ +M
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDK-GYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P+ YN +I K G++ + ++ + + T+I+G C K
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
D A IF M G P I YN+L+ K KV + +L++++ G+K S Y L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 382 IHGL 385
+ L
Sbjct: 465 VRNL 468
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 35/219 (15%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN----- 634
FD + + + G +S +L + + G+DP Y Y ++S F + G +
Sbjct: 211 FDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV 270
Query: 635 ------------------------------EAWAIITEMGEKLCPADIATYNMIIQGLGK 664
EA+ I + +K D Y +I+G +
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT 724
G A + ++K+G + YN +I+ K G I V F+ +M +G +++
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 725 YNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
NT+I+ G +A++ K M + G TPN +T L
Sbjct: 391 CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGK 285
M KKG + + YN+ IH G+++ + +++M G + + N +I C GK
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
+A ++++++ P+ TY LI+G CK K++ +++ ++ G +P + Y +
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 346 LLDVLFKATKVSEACQL 362
L+ L + V+ + L
Sbjct: 464 LVRNLKMSDSVATSLNL 480
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D + T + F KG L A KL+ + G+ P + YN ++ K+G + A
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
EM + + N +I+G G++D A I + + G + + YN LI K
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
++++ K ++++K+ G+ P + Y L+
Sbjct: 437 NKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 198/498 (39%), Gaps = 48/498 (9%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+F + P++ N + K+ D L ++E + C PD F++ +I+ +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ A + GF V N ++D+ K V A ++F++++Q K S +N+
Sbjct: 122 LFQAL-----VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR--KGS--DWNV 172
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
+I G K G E A LF D+ + D +++++++ +
Sbjct: 173 MISGYWKWGNKEEACKLF-DMMPEN---DVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA-SIKNPPSKKK 499
+V+ +++ G ++G + RL + + P W + A S + PS +
Sbjct: 229 ----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
Query: 500 DYSPMFPSKGDFSEIMSILTGSQDANLDSHD--------TKIEDEEGDEWSLSPHMDKLA 551
+ K + + + A LD H +I +E G + +L ++
Sbjct: 285 SLVKLIDEKR-----VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 552 --NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
++ A QLF P + V N+ ++ + G+ +LA + FE
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVS----------WNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 610 EAG-VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA 668
+ G P T S++S+ I+ + + + + Y +I + G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A + D + ++ D+V YNTL A G E +MK GI PD VTY ++
Sbjct: 450 WEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 729 IEVHSKAGLLKDAYKFLK 746
+ ++AGLLK+ + K
Sbjct: 506 LTACNRAGLLKEGQRIFK 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCK 282
+++F++L ++ L TW N I + GD++++ LF MP ++ ++N LI+
Sbjct: 319 RRIFNELGTQRN--LVTW--NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 283 LGKVKDALIVWEDL-NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
G+ A+ +ED+ + +PD T +++ C ++ I + + N +
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDS 434
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
Y SL+ + + + EA ++F++M + V +YN L NG L +
Sbjct: 435 GYRSLIFMYARGGNLWEAKRVFDEMKERDV----VSYNTLFTAFAANGDGVETLNLLSKM 490
Query: 402 KKKGQFVDGITYSIIV 417
K +G D +TY+ ++
Sbjct: 491 KDEGIEPDRVTYTSVL 506
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 42/203 (20%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
D + + I F DL + F +MP + ++N ++S + G +DAL ++ D+
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 298 ACAHQPDHFTYTTLIQGC-----------------------------------CKTYKID 322
+P+ T+ +I C K I
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A RIFN++ G + + +N+++ + +S A QLF+ M + V ++N LI
Sbjct: 317 SARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLI 369
Query: 383 HGLIKNGRPEAAYTLFCDLKKKG 405
G NG+ A F D+ G
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYG 392
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASA 673
DP Y N IM +VK A + ++ ++ + +N++I G K G + A
Sbjct: 135 DP--YVRNVIMDMYVKHESVESARKVFDQISQR----KGSDWNVMISGYWKWGNKEEACK 188
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
+ D + + D+V + +I K ++ K+F++M VV++N ++ ++
Sbjct: 189 LFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKS----VVSWNAMLSGYA 240
Query: 734 KAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ G +DA + ML G PN T
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETT 266
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+I N + + K K+ A ++ + E GV P + TYN+I + +V+KG A + +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 641 TE---MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
E M EK P + T +++ G + GR + R+ + ++V++N+LIN
Sbjct: 247 VEKMVMKEKAKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ D +++ MK + DV+TY+T++ S AG ++ A + K M+ AG P+
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 364
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
++G S +N+++++F + G +A + +M E +TYN +I+G G G+ +
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 670 LASAILDRLLKQGGY---LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
+S +LD +L++G +I +N L+ A K +++E + ++M+ G+ PD VTYN
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 727 TLIEVHSKAG--LLKDAYKFLKMMLDAGCTPNHVTDTTL--DYL--GREIDKLRY 775
T+ + + G + ++ KM++ PN T + Y GR D LR+
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+GS + +++ + +G+ A +F+ E G P +Y +++++ + +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
+I++E+ + D +N +I + G + A L ++ + G YNTLI
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 695 NALGKAGRIDEVNKFFEQMKSSG---INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
G AG+ + ++ + M G + P++ T+N L++ K +++A++ +K M +
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 752 GCTPNHVTDTTL 763
G P+ VT T+
Sbjct: 218 GVRPDTVTYNTI 229
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 45/264 (17%)
Query: 197 SNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLA 256
S + +SI FN ++ A ++ + Q K M + G T YN I +G G
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 257 TSFSLFHQM-------PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYT 309
S L M GP++ T+N L+ CK KV++A V + + C +PD TY
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 310 TL-------------------------------------IQGCCKTYKIDHATRIFNQMH 332
T+ + G C+ ++ R +M
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
+V+NSL++ + ++ M + VKA TY+ +++ G E
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 393 AAYTLFCDLKKKGQFVDGITYSII 416
A +F ++ K G D YSI+
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSIL 371
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 128/325 (39%), Gaps = 25/325 (7%)
Query: 81 AYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYI 140
+Y+ +L +++ ++Q L FN ++++ S N + +Q L +
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQAL--L 139
Query: 141 QQRHL-LQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNS 199
+ + L L P T YN+L I P S L L+ +D
Sbjct: 140 KMKELGLNP--TTSTYNTL-IKGYGIAGKPERSSELLDLM----------LEEGNVDVGP 186
Query: 200 NSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSF 259
N + FN L+ A K E +V K M++ G DT YN + G+ +
Sbjct: 187 NIRT--FNVLVQAWCKKKKVEEAWEVVKK-MEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 260 S------LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
S + + P+ T ++ C+ G+V+D L + + + + +LI
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
G + D + M + I Y+++++ A + +A Q+F++M + GVK
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLF 398
Y+IL G ++ P+ A L
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELL 388
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
L++VL + G+ +A V++ L H+P +YTTL+ + + I +++ +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+ +I +N++++ ++ + +A Q KM + G+ + TYN LI G G+PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 396 TLF 398
L
Sbjct: 171 ELL 173
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+ + N L+ + KL A KL+E V P TY +++ + + A ++
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
EM + +N II GLG+ GR A +++R IV YN+L+ KAG
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAG 369
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +K + M + G++P TYN + SK ++ +++AG +P+ +T
Sbjct: 370 DLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 167/448 (37%), Gaps = 31/448 (6%)
Query: 66 FNWCRSHHSSPLSPSAYSLILRSLSRP-AFXXXXXXXXXSIKQD--AVVLHPQSFNPLLH 122
F W LSPS + ++ SL + F ++ D + ++ +F L+
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 123 SLIISHNFHETLQILDYIQQRHLLQPGCTPL-IYNSLLIASLRNNHIPLAFSIFLKLIEL 181
+ + ++ ++ + + T L + LL A + H+ A S++L+ I
Sbjct: 182 RYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA-SMYLERI-- 238
Query: 182 FXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWG 241
+DSN + FN LL ++ KL+ + + M
Sbjct: 239 ----------GGTMDSNWVPSVRIFNILLNGWFRSR-KLKQAEKLWEEMKAMNVKPTVVT 287
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLN 297
Y I + + + + +M ++ +N +I L + G++ +AL + E
Sbjct: 288 YGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
C P TY +L++ CK + A++I M G P T YN K K
Sbjct: 348 VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTE 407
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
E L+ K+ + G TY++++ L ++G+ A + ++K +G D +T ++++
Sbjct: 408 EGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 418 LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDR---LMKHVREG 474
RG + +T + G+ G D R LM +
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
Query: 475 DLVPKVLRWKAGMEASIKNPPSKKKDYS 502
+P R ++ PP K + S
Sbjct: 528 KKLPNTYR------EAVDAPPDKDRRKS 549
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+LS A + E F P TYNS++ +F K G A I+ M + TY
Sbjct: 334 GRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N + K + + + +L++ G D + Y+ ++ L + G++ + ++MK+
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLD 764
GI+PD++T LI + + +L++A++ + G P ++T +D
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 572 VQQKGSDSFDIDMVNTFLSI--FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
+QQ G S V+T+ S F+ +S A ++++ + Y NSI+S VK
Sbjct: 124 MQQHGKIS-----VSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVK 178
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRA-DLASAILDRLLKQGGYLDIV 688
G + + +M D+ TYN ++ G K+ A ++ L G +D V
Sbjct: 179 NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSV 238
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
MY T++ GR +E F +QMK G +P++ Y++L+ +S G K A + + M
Sbjct: 239 MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEM 298
Query: 749 LDAGCTPNHVTDTTL 763
G PN V TTL
Sbjct: 299 KSIGLVPNKVMMTTL 313
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 577 SDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK-KGYFNE 635
S ++ + N+ LS + GKL KLF+ G+ P TYN++++ +K K + +
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLIN 695
A +I E+ D Y ++ GR++ A + ++ +G +I Y++L+N
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
+ G + ++ +MKS G+ P+ V TL++V+ K GL + + L + AG
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 756 NHV 758
N +
Sbjct: 341 NEM 343
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 147/382 (38%), Gaps = 31/382 (8%)
Query: 104 SIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASL 163
S+++ A VL Q N +L IS + + +Q+ +++QQ G + S I +
Sbjct: 88 SLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQH-----GKISVSTYSSCIKFV 142
Query: 164 RNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQ 223
++ A I+ + D ++ N N +L L K + KL+
Sbjct: 143 GAKNVSKALEIY----------------QSIPDESTKINVYICNSILSCLVK-NGKLDSC 185
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCW---GDLATSFSLFHQMP----GPDLCTYNCL 276
M + G D YN + GC + L ++P D Y +
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLA--GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTV 243
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
+++ G+ ++A + + H P+ + Y++L+ A + +M + G
Sbjct: 244 LAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGL 303
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYT 396
P ++ +LL V K + +L ++ G + Y +L+ GL K G+ E A +
Sbjct: 304 VPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARS 363
Query: 397 LFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIH 456
+F D+K KG DG SI++ DLV + +++
Sbjct: 364 IFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYC 423
Query: 457 KHGRWDWTDRLMKHVREGDLVP 478
+ G + R+MK + E + P
Sbjct: 424 RAGEMESVMRMMKKMDEQAVSP 445
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 84/174 (48%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
++ L+ + KG A +L G+ P +++ ++K G F+ + +++E+
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ Y M++ GL K G+ + A +I D + +G D + +I+AL ++ R E
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +++ D+V NT++ + +AG ++ + +K M + +P++ T
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
Y L+ L K GK+++A +++D+ + D + + +I C++ + A +
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
+ ++ N++L +A ++ ++ +KM ++ V T++ILI IK
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHL 464
Query: 393 AAYTLFCDLKKKGQFVD 409
AY D+ KG ++
Sbjct: 465 LAYQTTLDMHSKGHRLE 481
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
GV+ + TY++I++ + +N+A M + D TY+ I+ K G+ +
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
++ +R + G D + ++ L G+AG D + ++MKS + P+VV YNTL+E
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+AG A ML+AG TPN T T L
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 30/351 (8%)
Query: 56 TLHPSHKLH-FFNWCRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIKQDAVVLHP 114
+L K H FFNW +S P+ Y++ ++SL + +D V L
Sbjct: 162 SLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDN 221
Query: 115 QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSI 174
+++ ++ + +++ ++ + + + L+ T Y+++L ++ + S+
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVT---YSAILDVYSKSGKVEEVLSL 278
Query: 175 FLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKG 234
+ + A+ + ++IAF+ L +A ++ + + L + K
Sbjct: 279 YER----------------AVATGWKPDAIAFSVLGKMFGEAG---DYDGIRYVLQEMKS 319
Query: 235 FAL--DTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKD 288
+ + YN + A G G + SLF++M P+ T L+ + K +D
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN-GFRPGTIVYNSLL 347
AL +WE++ A D Y TL+ C + A R+FN M + RP Y ++L
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML 439
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
++ K +A +LFE+M + GV+ + L+ L K R + +F
Sbjct: 440 NIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF 490
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 578 DSFDIDMVNTFLSIFLAKGKLSL---ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
D ++D + T+ +I + +L A + FE + G+ P TY++I+ + K G
Sbjct: 215 DGVELDNI-TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE 273
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
E ++ D ++++ + G+ G D +L + ++V+YNTL+
Sbjct: 274 EVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLL 333
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
A+G+AG+ F +M +G+ P+ T L++++ KA +DA + + M
Sbjct: 334 EAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 4/192 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M K G LD Y+ I + F +M PD TY+ ++ V K GK
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
V++ L ++E A +PD ++ L + + D + +M + +P +VYN+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
LL+ + +A K A LF +M + G+ + +T L+ K A L+ ++K K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 406 QFVDGITYSIIV 417
+D I Y+ ++
Sbjct: 392 WPMDFILYNTLL 403
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
+ L ++ GK+ L+E G P + ++ + F + G ++ ++ EM
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
++ YN +++ +G+ G+ LA ++ + +L+ G + L+ GKA +
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA-GCTPNHVTDTTL 763
+ +E+MK+ D + YNTL+ + + GL ++A + M ++ C P++ + T +
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAM 438
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
++ + NT L GK LA LF EAG+ P T +++ + K + +A +
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ-GGYLDIVMYNTLINALGK 699
EM K P D YN ++ IG + A + + + + D Y ++N G
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
G+ ++ + FE+M +G+ +V+ L++ KA + D + + G P+
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
++I ++ ++ ++ ++ + + F + M K G D Y+ + + G + SL
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFER-MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSL 278
Query: 262 FHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+ + PD ++ L + + G V +++ + +P+ Y TL++ +
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K A +FN+M G P +L+ + KA +A QL+E+M +
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL 398
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFV-DGITYSIIV 417
YN L++ G E A LF D+K+ Q D +Y+ ++
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML 439
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 647 LCPADIATYNMIIQGLGKIGRA-DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
L P + YN+ ++ L + GR L + ++K G LD + Y+T+I + ++
Sbjct: 181 LFPMETIFYNVTMKSL-RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNK 239
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
++FE+M +G+ PD VTY+ +++V+SK+G +++ + + G P+ + + L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 766 LGREI---DKLRY 775
+ E D +RY
Sbjct: 300 MFGEAGDYDGIRY 312
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK---------ATKVS 357
TYTTLIQG + D A IF +M ++G P + YN LLD L K A KV
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ LF ++ +GVK + TY +I G K G E AYTLF +K+ G D TY+ ++
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M ++G +T Y I GD + +F +M PD+ TYN L+ LCK GK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 286 VKDALIV------WE---DLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
++ AL+ W+ L+ +P+ TYTT+I G CK + A +F +M +G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
P + YN+L+ + + + +L ++M TY L+ ++ +GR + +
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 603 KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGL 662
+LF ++ G+ + TY +++ + G + A I EM P DI TYN+++ GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 663 ---GKIGRADLASAILD------RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
GK+ +A +A + D L +G ++V Y T+I+ K G +E F +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
K G PD TYNTLI H + G + + +K M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+ EM ++ + TY +IQGL + G D+A I ++ G DI+ YN L++ L
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 699 K---------AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
K AG++++ F + G+ P+VVTY T+I K G ++AY + M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 750 DAGCTPNHVTDTTL 763
+ G P+ T TL
Sbjct: 123 EDGPLPDSGTYNTL 136
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 326 RIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
+F +M G T+ Y +L+ LF+A A ++F++M +GV TYNIL+ GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 386 IKNGRPEAA---------YTLFCDLKKKGQFVDGITYSIIV 417
KNG+ E A + LFC L KG + +TY+ ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMI 102
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/464 (19%), Positives = 193/464 (41%), Gaps = 50/464 (10%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
LF ++ ++ ++ +I V C++G + AL+ + ++ PD+F + + C
Sbjct: 129 LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKW 188
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ + +G V +SL D+ K + +A ++F+++ A +N
Sbjct: 189 SRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA----WNA 244
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+ G ++NG+ E A LF D++K+G +T S + G
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG 304
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
+D + TSL+ K G ++ + + + E D+V W + ++ +
Sbjct: 305 MELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVT----WNLIISGYVQQGLVEDAI 360
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
Y ++M ++E + D +L+ M A
Sbjct: 361 Y---------MCQLM----------------RLEKLKYDCVTLATLMSA----------A 385
Query: 561 SQLFTPTPGQRVQQ---KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
++ G+ VQ + S DI + +T + ++ G + A K+F+ E +
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL---- 441
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
+N++++++ + G EA + M + P ++ T+N+II L + G+ D A + +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPD 721
+ G +++ + T++N + + G +E F +M+ SG+ P+
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
+++M + K G +A + EK D+ +N ++ + G + A + +
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
+G +++ +N +I +L + G++DE F QM+SSGI P+++++ T++ + G ++
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 741 AYKFLKMMLDAGCTPNHVTDTT 762
A FL+ M ++G PN + T
Sbjct: 530 AILFLRKMQESGLRPNAFSITV 551
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 195/491 (39%), Gaps = 73/491 (14%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+F +M D+ T+N +IS + G V+DA+ + + + + D T TL+ +T
Sbjct: 331 VFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTEN 390
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+ + + F ++ ++++D+ K + +A ++F+ V+ +N
Sbjct: 391 LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNT 446
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L+ ++G A LF ++ +G + IT+++I+L G
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSG 506
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
+ +L++ T++M G+ ++G + ++ ++E L P SI S
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF--------SITVALSACAH 558
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
+ + + I+ L Q ++L S +T + D ++ ++K A +V +
Sbjct: 559 LASLHIGRTIHGYIIRNL---QHSSLVSIETSLV----DMYAKCGDINK-AEKV----FG 606
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
S+L++ P + N +S + G L A L+ G+ P + T
Sbjct: 607 SKLYSELP---------------LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITI 651
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEK--LCPADIATYNMIIQGLGKIGRADLASAILD-- 676
+++S+ G N+A I T++ K + P + Y +++ L G + A +++
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPC-LEHYGLMVDLLASAGETEKALRLIEEM 710
Query: 677 -------------------RLLKQGGYLDIVM----------YNTLINALGKAGRIDEVN 707
R + YL + Y T+ NA G DEV
Sbjct: 711 PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 708 KFFEQMKSSGI 718
K E MK+ G+
Sbjct: 771 KMREMMKAKGL 781
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 37/227 (16%)
Query: 574 QKGSDSFDIDMVNTF-LSIFLAKGKLSLACKLFEI-FTEAGVDPV----SYTYNSIMSSF 627
++G S I +VN L L L+ CK+ I + E D + T+N I+S +
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 628 VKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLG-----KIGR------------AD- 669
V++G +A + M + D T ++ K+G+ +D
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 670 -LASAILDRLLKQGGYLD------------IVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
LAS ++D K G +D ++++NTL+ A ++G E + F M+
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G+ P+V+T+N +I + G + +A M +G PN ++ TT+
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 4/245 (1%)
Query: 221 EFQQVFHKLMDKKGFALD---TWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLI 277
E + F +++ + GF D Y C+ G D + ++ P Y+ I
Sbjct: 768 EATRTFREMI-RSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYI 826
Query: 278 SVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR 337
LC++GK+++AL D +TY +++ G + + A N M G +
Sbjct: 827 RALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
PG VY SL+ FK ++ + + +KM E + S TY +I G + G+ E A+
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 398 FCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHK 457
F +++++G D TYS + +G + ++ G+++
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNR 1006
Query: 458 HGRWD 462
G+ D
Sbjct: 1007 EGKHD 1011
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCT----YNCLISVLCKLGKVKDALIVW 293
D +GY + +F G + + L ++ ++C + L+ LC+ ++ DAL +
Sbjct: 330 DAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
D+ D Y +I G + + A F + +G P Y ++ LFK
Sbjct: 388 -DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKL 446
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
+ + C LF +M + G++ ++ G + R A+ +F +++KG +Y
Sbjct: 447 KQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSY 506
Query: 414 SIIV 417
SI V
Sbjct: 507 SIFV 510
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D Y +IS + V AL +E + P TYT ++Q K + + +F
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
N+M NG P ++ +++ +V+EA ++F M ++G+K + ++Y+I + L ++
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 389 GRPEAAYTLF 398
R + +F
Sbjct: 517 SRYDEIIKIF 526
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 7/192 (3%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC----TYNCLISVLCKLGKVK 287
+ G+ ++ YN+ I GC D SLF++M T+ +I + G
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCC--KTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
A+ ++++ P T+ LI C K ++ ATR F +M +GF P +
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
L L + +A + + + G + Y+I I L + G+ E A + + +
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 406 QFVDGITYSIIV 417
+D TY IV
Sbjct: 850 SLLDQYTYGSIV 861
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDR 677
YTY SI+ +++G +A + M E + Y +I K + + +
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK 914
Query: 678 LLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGL 737
+ + +V Y +I G+++E F M+ G +PD TY+ I +A
Sbjct: 915 MEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 738 LKDAYKFLKMMLDAGCTPNHVTDTTLDY-LGRE----IDKLRYQKASIL 781
+DA K L MLD G P+ + T+ Y L RE + ++ QK S L
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSAL 1023
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 9/265 (3%)
Query: 225 VFHKLMDKKGFALDTWGYNICIHAF--GCWGDLATSF--SLFHQMPGPDLCTYNCLISVL 280
VF K M K GF LD YNI I + GDLA F + + L TY L+ +
Sbjct: 246 VFEK-MRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCI 304
Query: 281 CKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGT 340
K KV + +D+ +H + L++ C + KI A + ++ N
Sbjct: 305 AKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDA 364
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+ L+ L +A ++ +A ++ + M + + S Y I+I G ++ A F
Sbjct: 365 KYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKALEQFEV 423
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
+KK G+ TY+ I+ G D V IT+++ G R
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKA 485
++ + E + P WK+
Sbjct: 484 VAEAWKVFSSMEEKGIKPT---WKS 505
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
YN+++S + + +++EM + C DI T+ ++I GK + + +++
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKA 735
K G LD YN +I +L AGR D +F+++M GI + TY L++ +K+
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS 307
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 57/137 (41%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
L +G L A E G P + Y S++ F K+ + +M + C
Sbjct: 864 LLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPS 923
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ TY +I G +G+ + A + ++G D Y+ IN L +A + ++ K
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Query: 712 QMKSSGINPDVVTYNTL 728
+M GI P + + T+
Sbjct: 984 EMLDKGIAPSTINFRTV 1000
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ YN ++ G+ D+ ++ + K G DI + LI+ GKA +I + FE
Sbjct: 189 VGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFE 248
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
+M+ SG D YN +I AG A +F K M++ G T
Sbjct: 249 KMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
V+QK S + + NT LSI L + +L + G D T+ ++S + K
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
+ + +M + D YN++I+ L GR DLA ++++G + Y
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 692 TLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK----- 746
L++ + K+ ++D V + M + + L++ +G +K+A + ++
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK 358
Query: 747 -MMLDAG---------CTPNHVTD 760
M LDA C N + D
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVD 382
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D ++V +L G A + + G PV+ Y+ + + + G EA + +
Sbjct: 784 DRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAI--LDRLLKQGGYLDIVMYNTLINALG 698
+ D TY I+ GL + R DL A+ ++ + + G + +Y +LI
Sbjct: 843 ASFEGERSLLDQYTYGSIVHGL--LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
K ++++V + ++M+ P VVTY +I + G +++A+ + M + G +P+
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 759 T 759
T
Sbjct: 961 T 961
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 302 QPDHFT-----YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKV 356
Q D F+ Y T++ + +D + ++M NG + L+ V KA K+
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 357 SEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
+ +FEKM + G + YNI+I L GR + A + ++ +KG TY ++
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 417 V 417
+
Sbjct: 301 L 301
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 249 FGCWG---------DLATSFSLFHQM-----PGP------DLCTYNCLISVLCKLGKVKD 288
FGCW +L S LF ++ P D C N LI LC+ G ++
Sbjct: 161 FGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEA 220
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
AL + ++ +P+ T++ LI+G C K + A ++ +M P TI +N L+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
L K +V E L E+M +G + + TY +++GL+ R A + + G
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 409 DGITYSIIVL 418
++Y +VL
Sbjct: 341 SFLSYKKMVL 350
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G+++ A ++ + G P S ++N I++ V F+E I + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
N++I+GL + G + A +LD +Q +++ ++ LI G+ +E K E+M+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
I PD +T+N LI K G +++ L+ M GC PN T + Y
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
+N + G L A +L + F + P T++ ++ F KG F EA+ ++ M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
++ D T+N++I GL K GR + +L+R+ +G + Y ++ L R
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
E + QM S G+ P ++Y ++ + + + L+ M++ G P
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 598 LSLACKLFE----IFTEA---GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
L ++ KLF+ IF A GV+ + N ++ + G A ++ E ++
Sbjct: 176 LLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRP 235
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
++ T++ +I+G G+ + A +L+R+ K+ D + +N LI+ L K GR++E
Sbjct: 236 NVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLL 295
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLK-----DAYKFLKMMLDAGCTPNHVT 759
E+MK G P+ TY ++ GLL +A + + M+ G P+ ++
Sbjct: 296 ERMKVKGCEPNPGTYQEVL-----YGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
F KGK A KL E + ++P + T+N ++S KKG E ++ M K C +
Sbjct: 247 FCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TY ++ GL R A ++ +++ G + Y ++ L + + E++
Sbjct: 307 PGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLR 366
Query: 712 QMKSSGINPDVVTYNTLIE 730
QM + G P + + +++
Sbjct: 367 QMVNHGFVPKTLMWWKVVQ 385
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
+N IH F GD+ + +F + P DL ++NCLI+ K+G+ + A+ V++ + +
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+PD T L+ C ++ + + NG R + N+L+D+ K + EA +
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 313
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
+F+ + K + ++ +I G + G + + LF D+++K
Sbjct: 314 IFDNLE----KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 119/579 (20%), Positives = 222/579 (38%), Gaps = 99/579 (17%)
Query: 198 NSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD--- 254
NS + + N LL L K + L +Q+ +++ G LD + + I AF +
Sbjct: 45 NSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMI-INGLILDPFASSRLI-AFCALSESRY 102
Query: 255 LATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL---NACAHQPDHFTYTTL 311
L S + + P++ ++N I + K++ ++++ + C +PDHFTY L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 312 IQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGV 371
+ C I + + V+N+ + + + A ++F+ E
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD----ESP 218
Query: 372 KASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXX 431
++N LI+G K G E A ++ ++ +G D +T
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT------------------- 259
Query: 432 XXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASI 491
++ LV+ S++ G + ++V+E L + A M+
Sbjct: 260 ----------MIGLVSSCSML------GDLNRGKEFYEYVKENGLRMTIPLVNALMD--- 300
Query: 492 KNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKI----------------ED 535
MF GD E I + + S T I +D
Sbjct: 301 ------------MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 536 EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAK 595
E + L M + Q K A LF Q +Q + +I M++ LS
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALF-----QEMQTSNTKPDEITMIHC-LSACSQL 402
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYN-----SIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
G L + I+ ++ S + N S++ + K G +EA ++ + +
Sbjct: 403 GALDVG-----IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR---- 453
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
+ TY II GL G A A + + ++ G D + + L++A G I +F
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 711 EQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
QMKS +NP + Y+ ++++ +AGLL++A + ++ M
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGK 285
H+ ++K +L+ + + G+++ + S+FH + + TY +I L G
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN-GFRPGTIVYN 344
A+ + ++ PD T+ L+ CC I F+QM + P Y+
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKA--SCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
++D+L +A + EA +L E M E A + +HG ++ G A L D
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590
Query: 403 KKGQFV--DGI 411
G +V DG+
Sbjct: 591 DSGIYVLLDGM 601
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASA 673
P TYNS++ + G NE +++ M E +I TYN ++ G+ K R D+
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLV 269
Query: 674 ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
I + +++ G D++ Y +I++LG++G + E + F++MK I P V Y LI+
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 734 KAGLLKDAYKF 744
K+G + A +
Sbjct: 330 KSGDFQSALQL 340
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNA-CAHQPDHFTYTTLIQGCCKTYKIDHATR 326
PD+ TYN ++ +L + G V + L V + C+ + TY T++ G K + D
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLV 269
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
I+N+M G P + Y +++D L ++ V E+ +LF++M Q ++ S Y LI L
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 387 KNGRPEAAYTLFCDLK 402
K+G ++A L +LK
Sbjct: 330 KSGDFQSALQLSDELK 345
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
N I+ +F + ++ I+ EM E C D+ TYN ++ LG+ G + +L + +
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 681 QGGY-LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
++I+ YNT++N + KA R D + +M GI PD+++Y +I+ ++G +K
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 740 DAYKFLKMMLDAGCTPN-HVTDTTLDYLGREID 771
++ + M P+ +V +D L + D
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGD 333
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 117/592 (19%), Positives = 233/592 (39%), Gaps = 92/592 (15%)
Query: 202 NSIAFNQLLVA-LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+S+ F+ LL + +R D +L ++ H + + D+ YN I + GD A +
Sbjct: 61 DSVTFSSLLKSCIRARDFRL--GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 261 LFHQMP---GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+F M D+ +++ +++ G+ DA+ V+ + P+ + YT +I+ C
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 318 TYKIDHATRIFNQMHNNG-FRPGTIVYNSLLDVLFKATKVSE-ACQLFEKMAQEGVKASC 375
+ + + G F V SL+D+ K E A ++F+KM++ V
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV---- 234
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXX 435
T+ ++I ++ G P A F D+ G D T S +
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA---------------- 278
Query: 436 XXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA-GMEASIKNP 494
+ +L +G H W L+ V E LV + A G +
Sbjct: 279 ---------CAELENLSLGKQLHS-WAIRSGLVDDV-ECSLVDMYAKCSADGSVDDCRKV 327
Query: 495 PSKKKDYSPMFPSKGDFSEIMSILTG-SQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQ 553
+ +D+S M +++TG ++ NL + + E + + P+ ++
Sbjct: 328 FDRMEDHSVM--------SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 554 VKSSGYASQLFTPTPGQRVQ----QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFT 609
K+ G L P G++V ++G S + + N+ +S+F+ ++ A + FE +
Sbjct: 380 FKACG---NLSDPRVGKQVLGQAFKRGLAS-NSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
E + +YN+ + + F +A+ +++E+ E+ T+ ++ G+ +G
Sbjct: 436 EKNL----VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE------------------ 711
I +++K G + + N LI+ K G ID ++ F
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 712 -------------QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
QM G+ P+ VTY ++ S GL+ + ++ M +
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/534 (20%), Positives = 208/534 (38%), Gaps = 93/534 (17%)
Query: 268 PDLCTYNCLISVLCKLG---KVKDA-----------LIVWEDLNACAHQ----------- 302
PD YN LIS+ K G K +D ++ W + AC
Sbjct: 95 PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
Query: 303 ---------PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG-FRPGTIVYNSLLDVLFK 352
P+ + YT +I+ C + + + G F V SL+D+ K
Sbjct: 155 VEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 353 ATKVSE-ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
E A ++F+KM++ V T+ ++I ++ G P A F D+ G D
Sbjct: 215 GENSFENAYKVFDKMSELNV----VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 412 TYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHV 471
T S + + +L +G H W L+ V
Sbjct: 271 TLSSVFSA-------------------------CAELENLSLGKQLHS-WAIRSGLVDDV 304
Query: 472 REGDLVPKVLRWKA-GMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTG-SQDANLDSH 529
E LV + A G + + +D+S M +++TG ++ NL +
Sbjct: 305 -ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM--------SWTALITGYMKNCNLATE 355
Query: 530 DTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQ----QKGSDSFDIDMV 585
+ E + + P+ ++ K+ G L P G++V ++G S + +
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACG---NLSDPRVGKQVLGQAFKRGLAS-NSSVA 411
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ +S+F+ ++ A + FE +E + +YN+ + + F +A+ +++E+ E
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNL----VSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ T+ ++ G+ +G I +++K G + + N LI+ K G ID
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++ F M+ N +V+++ ++I +K G + M++ G PN VT
Sbjct: 528 ASRVFNFME----NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 39/243 (16%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
S+S+ +N++L L K EF QVF ++ + GF ++ Y + ++ + + +
Sbjct: 141 SSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGF-VNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 261 LFHQMP--GPD------------LCTY------------------------NCLISVLCK 282
+F + G D LC Y N +++ C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCV 259
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
LG V +A W+D+ A +PD +Y T+I K K+ A ++ M + P +
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
N+++D L ++ EA ++F +++++G + TYN L+ L K R E + L +++
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 403 KKG 405
KG
Sbjct: 380 LKG 382
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + N + K ++ A ++F +E G DP TYNS++ K + W ++
Sbjct: 316 DVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELV 375
Query: 641 TEM---GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
EM G P D+ T++ +++ + D+ +L+R+ K + +YN +
Sbjct: 376 EEMELKGGSCSPNDV-TFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLY 431
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
+ + ++V + + +M+ SG+ PD TY I G + +A + + M+ G P
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Query: 758 VTDTTLD 764
T+ L+
Sbjct: 492 RTEMLLN 498
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 121/305 (39%), Gaps = 31/305 (10%)
Query: 87 RSLSRPAFXXXXXXXXXSIKQDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLL 146
RS +PA+ S+ + +L +N +L L F E Q+ D + +R
Sbjct: 120 RSDWKPAYILSQLVVKQSVHLSSSML----YNEILDVLGKMRRFEEFHQVFDEMSKRDGF 175
Query: 147 QPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAF 206
T Y LL + + A +F + E + + +AF
Sbjct: 176 VNEKT---YEVLLNRYAAAHKVDEAVGVFERRKEF----------------GIDDDLVAF 216
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
+ LL+ L + +EF + ++ F D N+ ++ + G++ + + +
Sbjct: 217 HGLLMWLCRYK-HVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDII 274
Query: 267 G----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
PD+ +Y +I+ L K GK+ A+ ++ + PD +I C +I
Sbjct: 275 ASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
A +F ++ G P + YNSLL L K + + +L E+M +G SC ++
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG--GSCSPNDVTF 392
Query: 383 HGLIK 387
L+K
Sbjct: 393 SYLLK 397
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQM----PGPDLCTYNCLISVLCKLGKVKDALIVW 293
D Y I+A G L + L+ M PD+ N +I LC ++ +AL V+
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG--FRPGTIVYNSLLDVLF 351
+++ P+ TY +L++ CK + + + +M G P + ++ LL
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQ 400
Query: 352 KATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGI 411
++ V + E+MA+ + + YN++ ++ + E ++ ++++ G D
Sbjct: 401 RSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQR 457
Query: 412 TYSIIV 417
TY+I +
Sbjct: 458 TYTIRI 463
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
L+ + A K+ A +FE E G+D ++ ++ + + A + +
Sbjct: 183 VLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE 242
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
DI NMI+ G +G A ++ D+V Y T+INAL K G++ +
Sbjct: 243 F-GCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKA 301
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ + M + NPDV N +I+ + +A + + + + G PN VT +L
Sbjct: 302 MELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSL 358
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 266 PGPDLCTYNCLISVLCKLGKVKDALIVWE-----DLNACAHQPDHFTYTTLIQGCCKTYK 320
P P++ TYN L+ LCK+ + + VWE +L + P+ T++ L++ ++
Sbjct: 348 PDPNVVTYNSLLKHLCKIRRTEK---VWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKD 404
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
+D + +M N + +YN + + + K + +++ +M + G+ +TY I
Sbjct: 405 VDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTI 461
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKG 405
IHGL G+ A + F ++ KG
Sbjct: 462 RIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
N I++ + G +EA ++ C D+ +Y +I L K G+ A + +
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
D+ + N +I+AL RI E + F ++ G +P+VVTYN+L++ K +
Sbjct: 311 TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEK 370
Query: 741 AYKFL-KMMLDAG-CTPNHVTDTTLDYL 766
++ + +M L G C+PN D T YL
Sbjct: 371 VWELVEEMELKGGSCSPN---DVTFSYL 395
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 109/552 (19%), Positives = 219/552 (39%), Gaps = 87/552 (15%)
Query: 234 GFALDT-WGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIV 292
GF +D+ G + + C GDL + +F ++ +N L++ L K G ++ +
Sbjct: 124 GFVIDSNLGSKLSLMYTNC-GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 293 WEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFK 352
++ + + + D +T++ + + + ++ + +GF V NSL+ K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 353 ATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGIT 412
+V A ++F++M + V ++N +I+G + NG E ++F + V GI
Sbjct: 243 NQRVDSARKVFDEMTERDV----ISWNSIINGYVSNGLAEKGLSVFVQM-----LVSGIE 293
Query: 413 YSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVR 472
+DL TI S+ G + +
Sbjct: 294 ------------------------------IDLATIVSVFAGCADS----------RLIS 313
Query: 473 EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTK 532
G V + G++A M+ GD ++ D ++ S+ +
Sbjct: 314 LGRAVHSI-----GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 533 IED--EEGDEWSLSPHMDKLANQVKSSGYASQLFTPTP-------------GQRVQQ--K 575
I EG L+ KL +++ G + ++T T G+RV + K
Sbjct: 369 IAGYAREG----LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 576 GSD-SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+D FDI + N + ++ G + A +L +F+E V + ++N+I+ + K Y N
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEA-EL--VFSEMRVKDI-ISWNTIIGGYSKNCYAN 480
Query: 635 EAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
EA ++ + EK D T ++ + D I +++ G + D + N+L
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
++ K G + + F+ + S D+V++ +I + G K+A M AG
Sbjct: 541 VDMYAKCGALLLAHMLFDDIAS----KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596
Query: 754 TPNHVTDTTLDY 765
+ ++ +L Y
Sbjct: 597 EADEISFVSLLY 608
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 173/451 (38%), Gaps = 56/451 (12%)
Query: 304 DHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLF 363
D T +++Q C + + + N + NGF + + + L + + EA ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 364 EKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXX 423
+++ E +NIL++ L K+G + LF + G +D T+S +
Sbjct: 153 DEVKIE----KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 424 XXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
GF SL+ K+ R D ++ + E D V+ W
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD----VISW 264
Query: 484 KAGMEASIKNPPSKK--KDYSPMFPS--KGDFSEIMSILTGSQDANLDSHDTKIEDEEGD 539
+ + + N ++K + M S + D + I+S+ G D+ L S
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS----------- 313
Query: 540 EWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLS 599
L V S G K S + NT L ++ G L
Sbjct: 314 ----------LGRAVHSIGV---------------KACFSREDRFCNTLLDMYSKCGDLD 348
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
A +F ++ V VSYT S+++ + ++G EA + EM E+ D+ T ++
Sbjct: 349 SAKAVFREMSDRSV--VSYT--SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 719
+ D + + + + DI + N L++ K G + E F +M+
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV---- 460
Query: 720 PDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
D++++NT+I +SK +A ++L+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 216 ADMKL-EFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYN 274
AD +L + H + K F+ + N + + GDL ++ ++F +M + +Y
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK-IDHATRIFNQMHN 333
+I+ + G +A+ ++E++ PD +T T ++ CC Y+ +D R+ +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN-CCARYRLLDEGKRVHEWIKE 425
Query: 334 NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEA 393
N V N+L+D+ K + EA +F +M + + ++N +I G KN
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI----ISWNTIIGGYSKNCYANE 481
Query: 394 AYTLFCDLKKKGQF 407
A +LF L ++ +F
Sbjct: 482 ALSLFNLLLEEKRF 495
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 112/544 (20%), Positives = 209/544 (38%), Gaps = 67/544 (12%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
LE + H ++ K GF D + N I + G + +F +MP D+ ++N +IS
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
LG +L++++++ C +PD F+ + + C Y I + G
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 340 TI-VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
+ V S+LD+ K +VS A ++F M Q + A +N++I +NGR A+ F
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA----WNVMIGCYARNGRVTDAFLCF 321
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
+ ++ + SI +L RGF+ +V T+L+ +
Sbjct: 322 QKMSEQNGLQPDVITSINLLP---ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSIL 518
G+ + + + E + V+ W + + A ++N K+YS + E+ L
Sbjct: 379 GQLKSAEVIFDRMAEKN----VISWNSIIAAYVQNG----KNYSAL--------ELFQEL 422
Query: 519 TGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKG-- 576
S + I + SLS + A VKS +++ + + G
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 577 SDSF---------DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSF 627
D+ D+ N+ + + G ++ LF + V+P T+ S++++
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 628 VKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLASAILDR--------- 677
G +E W M + I Y ++ +G+ G A L+
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 678 ----LLKQGGYLDIVM------------------YNTLINALGKAGRIDEVNKFFEQMKS 715
L + DI + Y L+N +AGR ++VN+ M+S
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 716 SGIN 719
GI+
Sbjct: 663 KGIS 666
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 533 IEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIF 592
++D+ WS +A V++ Y L QR+ + + F + V S
Sbjct: 223 MQDKSSVTWS-----SMVAGYVQNKNYEEALLLYRRAQRMSLE-QNQFTLSSVICACSNL 276
Query: 593 LA--KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPA 650
A +GK ++ + ++G + +S + + K G E++ I +E+ EK
Sbjct: 277 AALIEGK-----QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK---- 327
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
++ +N II G K R + +++ + G + + V +++L++ G G ++E +FF
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 711 EQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
+ M+++ G++P+VV Y+ ++++ +AGLL +AY+ +K
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N + ++ A +E +Q+ H ++ K GF + + + + + G L S+ +
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 262 FHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
F ++ +L +N +IS K + K+ +I++E + P+ T+++L+ C T +
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 322 DHATRIFNQMHNN-GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-------GVKA 373
+ R F M G P + Y+ ++D+L +A +SEA +L + + + + A
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 374 SCQTYNIL 381
SC+ Y L
Sbjct: 441 SCRVYKNL 448
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 686 DIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFL 745
++ ++NT+I+ K R EV FE+M+ G++P+ VT+++L+ V GL+++ +F
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 746 KMMLDA-GCTPNHV-TDTTLDYLGR 768
K+M G +PN V +D LGR
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGR 412
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 562 QLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
+LF G+++ + D +M + +++ +G + ++ +A +
Sbjct: 304 KLFKEAGGKKLLK------DPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILC 357
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
+I++ F K+ F EA + ++ C A TY + I ++ + + A + D ++K+
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
G +V Y+ +++ GK R+ + + +MK G P++ YN+LI++H +A L+ A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 742 YKFLKMMLDAGCTPNHVTDTTL 763
K K M A P+ V+ T++
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSM 499
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 135/331 (40%), Gaps = 62/331 (18%)
Query: 130 FHETLQILDYIQQRHLLQPGCTPLIYNSLLIA--SLRNNHIPLAFSIFLKLIELFXXXXX 187
+ T+Q+ D ++Q ++P +P Y ++ A + NH K++ELF
Sbjct: 189 YSSTIQVFDRLKQSVGVEP--SPGCYCRIMEAHEKIGENH---------KVVELFQEFKS 237
Query: 188 XXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIH 247
A +S S + + +L K+ E +V ++ DK G + Y++ I
Sbjct: 238 QRLSFLAKESGS-----IYTIVCSSLAKSGRAFEALEVLEEMKDK-GIPESSELYSMLIR 291
Query: 248 AFGCWGDLATSFSLFHQMPG------PDLCTYNCLISV---------------------- 279
AF ++ + LF + G P++C L+ V
Sbjct: 292 AFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKV 351
Query: 280 ----LC-------KLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
LC K +A+ V+E + TY I C+ K + A +F
Sbjct: 352 TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI--HGLI 386
++M GF + Y++++D+ K ++S+A +L KM Q G K + YN LI HG
Sbjct: 412 DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ R A ++ ++K+ D ++Y+ ++
Sbjct: 472 MDLR--RAEKIWKEMKRAKVLPDKVSYTSMI 500
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 74/139 (53%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A K++E + + TY ++++ + +N+A + EM +K + Y+ I+
Sbjct: 372 AVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMD 431
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
GK R A ++ ++ ++G +I +YN+LI+ G+A + K +++MK + + P
Sbjct: 432 MYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLP 491
Query: 721 DVVTYNTLIEVHSKAGLLK 739
D V+Y ++I ++++ L+
Sbjct: 492 DKVSYTSMISAYNRSKELE 510
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGK 285
M KKGF Y+ + +G L+ + L +M P++ YN LI + +
Sbjct: 414 MVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMD 473
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
++ A +W+++ PD +YT++I ++ +++ ++ + N + +
Sbjct: 474 LRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGI 533
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
++ V K +++ E +L + M EG + + Y+ ++ L G
Sbjct: 534 MVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKV 286
HK+ DK D Y I + G + + LF ++P D+ ++N +IS + G
Sbjct: 189 HKVFDKSPHR-DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
K+AL +++D+ +PD T T++ C ++ I+ ++ + ++GF + N+L
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
+D+ K ++ AC LFE++ + V ++N LI G + A LF ++ + G+
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDV----ISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 407 FVDGIT 412
+ +T
Sbjct: 364 TPNDVT 369
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
+E + H +D GF + N I + G+L T+ LF ++P D+ ++N LI
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID--HATRIFNQMHNNGFR 337
+ K+AL++++++ P+ T +++ C ID ++ G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 338 PGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
+ + SL+D+ K + A Q+F + + S ++N +I G +GR +A++ L
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRADASFDL 457
Query: 398 FCDLKKKGQFVDGITY 413
F ++K G D IT+
Sbjct: 458 FSRMRKIGIQPDDITF 473
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A KL+ G+ P SYT+ ++ S K F E I + + C D+ + +I
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
+ GR + A + D+ + D+V Y LI G I+ K F+++
Sbjct: 178 MYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK---- 229
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
DVV++N +I +++ G K+A + K M+ P+ T T+
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ + + ++G + A KLF+ E V V ++N+++S + + G + EA +
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFD---EIPVKDV-VSWNAMISGYAETGNYKEALELF 254
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + D +T ++ + G +L + + G ++ + N LI+ K
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G ++ FE++ DV+++NTLI ++ L K+A + ML +G TPN VT
Sbjct: 315 GELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 13/210 (6%)
Query: 544 SPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSF---DIDMVNTFLSIFLAKGKLSL 600
SPH D ++ GYAS+ + QK D D+ N +S + G
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIEN-----AQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQ 660
A +LF+ + V P T +++S+ + G + + + +++ N +I
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
K G + A + +RL Y D++ +NTLI E F++M SG P
Sbjct: 310 LYSKCGELETACGLFERL----PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
+ VT +++ + G + D +++ + +D
Sbjct: 366 NDVTMLSILPACAHLGAI-DIGRWIHVYID 394
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 236 ALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWED 295
D +N I F G + + +LF +MP + ++N +IS + G+ KDAL ++ +
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 296 LNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATK 355
+ +PD FT +L+ C + I + N F +IV +L+D+ K
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 356 VSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
+ E +FE ++ + SC +N +I GL NG E A LF +L++ G D +++
Sbjct: 309 IEEGLNVFECAPKK--QLSC--WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 587 TFLSIFLAKGKLSLAC---KLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
T+ S+F A G+L A +L + + G++ S+ N+++ +V G EAW I M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
D+ +N +I G K G D A + D + ++ G V +N++I+ + GR
Sbjct: 188 ----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG----VSWNSMISGFVRNGRF 239
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ F +M+ + PD T +L+ + G
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+ T+N I CK +V++AL +++ +P +YTT+I+ C+ ++ +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++M NG P +I Y +++ L + EA ++ +M + G K YN LIH L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 388 NGRPEAAYTLF-CDLKKKGQFVDGITYSIIV 417
GR E A +F ++ + G ++ TY+ ++
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 603 KLFEIFTEA---GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
K++E+ +E G P S TY +IMSS + F EA + T M C D YN +I
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 660 QGLGKIGRADLASAILDRLLKQ-GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
L + GR + A + + + G ++ YN++I D+ + ++M+SS +
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 719 -NPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
NPDV TY L+ K G + + K LK M+
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G P +Y +I+ + ++ F + + +++EM P + TY I+ L + A
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE-QMKSSGINPDVVTYNTLIE 730
+ R+ + G D + YN LI+ L +AGR++E + F +M G++ + TYN++I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 731 VHSKAGLLKDAYKFLKMMLDAG-CTPN 756
++ A + LK M + C P+
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPD 400
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T IM F G + EA I +GE + + N+++ L K R + A +L +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K + +N I+ KA R++E ++MK G P V++Y T+I + +
Sbjct: 217 -KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
Y+ L M G PN +T TT+
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTI 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
+ +G ++ V + F G+ A +F+ E G++ + + N ++ + K+
Sbjct: 146 RMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNT 692
+A ++ ++ + P + T+N+ I G K R + A + + G ++ Y T
Sbjct: 206 VEQARVVLLQLKSHITP-NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 693 LINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+I + +V + +M+++G P+ +TY T++ + ++A + M +G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 753 CTPN 756
C P+
Sbjct: 325 CKPD 328
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P+ T+N I CK +V++AL +++ +P +YTT+I+ C+ ++ +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
++M NG P +I Y +++ L + EA ++ +M + G K YN LIH L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 388 NGRPEAAYTLF-CDLKKKGQFVDGITYSIIV 417
GR E A +F ++ + G ++ TY+ ++
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 603 KLFEIFTEA---GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
K++E+ +E G P S TY +IMSS + F EA + T M C D YN +I
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 660 QGLGKIGRADLASAILDRLLKQ-GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGI 718
L + GR + A + + + G ++ YN++I D+ + ++M+SS +
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 719 -NPDVVTYNTLIEVHSKAGLLKDAYKFLKMML 749
NPDV TY L+ K G + + K LK M+
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G P +Y +I+ + ++ F + + +++EM P + TY I+ L + A
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE-QMKSSGINPDVVTYNTLIE 730
+ R+ + G D + YN LI+ L +AGR++E + F +M G++ + TYN++I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 731 VHSKAGLLKDAYKFLKMMLDAG-CTPN 756
++ A + LK M + C P+
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPD 400
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T IM F G + EA I +GE + + N+++ L K R + A +L +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
K + +N I+ KA R++E ++MK G P V++Y T+I + +
Sbjct: 217 -KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
Y+ L M G PN +T TT+
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTI 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 573 QQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGY 632
+ +G ++ V + F G+ A +F+ E G++ + + N ++ + K+
Sbjct: 146 RMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 633 FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNT 692
+A ++ ++ + P + T+N+ I G K R + A + + G ++ Y T
Sbjct: 206 VEQARVVLLQLKSHITP-NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 693 LINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+I + +V + +M+++G P+ +TY T++ + ++A + M +G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 753 CTPN 756
C P+
Sbjct: 325 CKPD 328
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 76/140 (54%)
Query: 620 YNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLL 679
+N I+ + K G++ + +M + D+ +Y++ + + K G+ A + +
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 680 KQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLK 739
+ LD+V YNT+I A+G + ++ + F +M+ G P+V T+NT+I++ + G ++
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 740 DAYKFLKMMLDAGCTPNHVT 759
DAY+ L M GC P+ +T
Sbjct: 312 DAYRMLDEMPKRGCQPDSIT 331
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 13/226 (5%)
Query: 535 DEEG---DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI 591
D EG D +S S +MD + K A +L+ +R++ D+ NT +
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWK-AVKLYKEMKSRRMK------LDVVAYNTVIRA 268
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
A + ++F E G +P T+N+I+ + G +A+ ++ EM ++ C D
Sbjct: 269 IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
TY + L K ++ R+++ G + Y L+ + G + V ++
Sbjct: 329 SITYMCLFSRLEKPSE---ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWK 385
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
MK SG PD YN +I+ + G+L A ++ + M++ G +P
Sbjct: 386 TMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLC 281
+ K MD +G D + Y+I + G + L+ +M D+ YN +I +
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 282 KLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTI 341
V+ + V+ ++ +P+ T+ T+I+ C+ ++ A R+ ++M G +P +I
Sbjct: 271 ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSI 330
Query: 342 VYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
Y L L K SE LF +M + GV+ TY +L+ + G + ++ +
Sbjct: 331 TYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 402 KKKGQFVDGITYSIIV 417
K+ G D Y+ ++
Sbjct: 388 KESGDTPDSAAYNAVI 403
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
+N ++ KLG W+ ++ D F+Y+ + CK+ K A +++ +M
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
+ + + YN+++ + + V ++F +M + G + + T+N +I L ++GR
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 393 AAYTLFCDLKKKGQFVDGITY 413
AY + ++ K+G D ITY
Sbjct: 312 DAYRMLDEMPKRGCQPDSITY 332
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQV-FHKLMDKKGFAL-DTWGYNICIHAF--- 249
LD + + +F L+ AL + +E +++ F K + GF++ +T +N+ + +
Sbjct: 143 LDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKL 202
Query: 250 GCWGDLATSFS-LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G WG + + + DL +Y+ + ++CK GK A+ +++++ + + D Y
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
T+I+ + ++ R+F +M G P +N+++ +L + ++ +A ++ ++M +
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
G + TY L L K P +LF + + G
Sbjct: 323 RGCQPDSITYMCLFSRLEK---PSEILSLFGRMIRSG 356
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 65/132 (49%)
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
+G ++ +N+I++G K+G ++ +G D+ Y+ ++ + K+G+
Sbjct: 180 IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGK 239
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
+ K +++MKS + DVV YNT+I + ++ + + M + GC PN T T
Sbjct: 240 PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 763 LDYLGREIDKLR 774
+ L E ++R
Sbjct: 300 IIKLLCEDGRMR 311
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 561 SQLFTPTPGQRVQQKGSDSFDID--MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
+++F +Q G D D +N+ L F G++ + +E F +G++P
Sbjct: 269 AKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIR 328
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T+N ++ S+ K G + + A++ M + I TYN++I G+ G + +
Sbjct: 329 TFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 388
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+ + V +L+ A G+A + D++ +++S I D+V +N L++ + +
Sbjct: 389 QSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKF 448
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTL 763
+ L++M G P+ +T T+
Sbjct: 449 AEMKGVLELMEKKGFKPDKITYRTM 473
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 584 MVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
++ +FL +F A K+ L G+ P + TYN+++ ++ K F E + + +M
Sbjct: 227 LIKSFLQVF-AFDKVQ---DLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQM 282
Query: 644 -GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
GE C D T N ++ G G+ ++ ++ G +I +N L+++ GK+G
Sbjct: 283 LGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGN 342
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+++ E M+ + +VTYN +I+ +AG LK ++M P+ VT
Sbjct: 343 YKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVT 399
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEA-GVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
++ +S + G+ A L E + P +TY+ ++ SF++ F++ +++
Sbjct: 186 EVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLS 245
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGR-ADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + + TYN +I GK ++ S ++ L + D N+ + A G
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGN 305
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT- 759
G+I+ + +E+ +SSGI P++ T+N L++ + K+G K ++ M + VT
Sbjct: 306 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 365
Query: 760 DTTLDYLGREID 771
+ +D GR D
Sbjct: 366 NVVIDAFGRAGD 377
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 6/200 (3%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCT----YNCLISV 279
QVF L ++ + + Y I G + LF +M Y L+S
Sbjct: 135 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 280 LCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRP 338
+ G+ A + E + + + QPD TY+ LI+ + + D + + M G RP
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 339 GTIVYNSLLDVLFKATKVSE-ACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTL 397
TI YN+L+D KA E L + + ++ K T N + NG+ E
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 398 FCDLKKKGQFVDGITYSIIV 417
+ + G + T++I++
Sbjct: 315 YEKFQSSGIEPNIRTFNILL 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK-QGGYLDIVMYNTL 693
+A + EM + C + Y ++ + GR D A +L+R+ D+ Y+ L
Sbjct: 168 KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSIL 227
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMML-DAG 752
I + + D+V M+ GI P+ +TYNTLI+ + KA + + L ML +
Sbjct: 228 IKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDD 287
Query: 753 CTPNHVT-DTTLDYLG 767
C P+ T ++TL G
Sbjct: 288 CKPDSWTMNSTLRAFG 303
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/315 (18%), Positives = 118/315 (37%), Gaps = 24/315 (7%)
Query: 108 DAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNH 167
+ V++ + + L+ + S F +L+ ++ H C P ++
Sbjct: 179 EGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSH----NCQPDVH------------ 222
Query: 168 IPLAFSIFLK-LIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVF 226
+SI +K +++F N+I +N L+ A KA M +E +
Sbjct: 223 ---TYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCK 282
+++ + D+W N + AFG G + + + + P++ T+N L+ K
Sbjct: 280 IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGK 339
Query: 283 LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
G K V E + + TY +I + + +F M + P +
Sbjct: 340 SGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVT 399
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
SL+ +A+K + + + ++ +N L+ + + + ++
Sbjct: 400 LCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELME 459
Query: 403 KKGQFVDGITYSIIV 417
KKG D ITY +V
Sbjct: 460 KKGFKPDKITYRTMV 474
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+ +L+V L K + ++F +++++ G ++ Y + A+ G +F+L +M
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINE-GCVVNHEVYTALVSAYSRSGRFDAAFTLLERM 211
Query: 266 PG-----PDLCTYNCLISVLCKL---GKVKDALIVWEDLNACAHQPDHFTYTTLIQ--GC 315
PD+ TY+ LI ++ KV+D L D+ +P+ TY TLI G
Sbjct: 212 KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL---SDMRRQGIRPNTITYNTLIDAYGK 268
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K + ++ + + + + +P + NS L ++ +EK G++ +
Sbjct: 269 AKMF-VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+T+NIL+ K+G + + ++K +TY++++
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
++ Y +I LGK + + A + ++ +G ++ +Y L++A ++GR D
Sbjct: 149 NVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLL 208
Query: 711 EQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT-DTTLDYLGR 768
E+MKSS PDV TY+ LI+ + L M G PN +T +T +D G+
Sbjct: 209 ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGK 268
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 10/235 (4%)
Query: 532 KIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSI 591
K E+ G +SL M K +VK A ++F + K FD+ + NT +S+
Sbjct: 170 KKENVTGHTYSL---MLKAVAEVKGCESALRMFRELERE---PKRRSCFDVVLYNTAISL 223
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPA 650
+ +++ + G TY+ ++S FV+ G A + EM K+
Sbjct: 224 CGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLR 283
Query: 651 DIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFF 710
+ A Y MI K + DLA I +LK+G ++V NTLIN+LGKAG++ V K +
Sbjct: 284 EDAMYAMI-SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVY 342
Query: 711 EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG--CTPNHVTDTTL 763
+KS G PD T+N L+ KA +D + M+ C ++ +T +
Sbjct: 343 SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAM 397
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 29/261 (11%)
Query: 146 LQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIA 205
LQP NS L LRN I AF++F + N
Sbjct: 138 LQPNAHAC--NSFLSCLLRNGDIQKAFTVF-----------------EFMRKKENVTGHT 178
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMD--KKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
++ +L A+ + ++F +L K+ D YN I G ++ + ++
Sbjct: 179 YSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWR 238
Query: 264 QMPGP----DLCTYNCLISVLCKLGKVKDALIVWEDL--NACAHQPDHFTYTTLIQGCCK 317
M G TY+ L+S+ + G+ + AL V++++ N + + D +I C K
Sbjct: 239 VMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED--AMYAMISACTK 296
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
K D A +IF M G +P + N+L++ L KA KV +++ + G K T
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 378 YNILIHGLIKNGRPEAAYTLF 398
+N L+ L K R E LF
Sbjct: 357 WNALLTALYKANRYEDVLQLF 377
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 154/389 (39%), Gaps = 41/389 (10%)
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
L L + KV A +LF+ M G++ + N + L++NG + A+T+F + +K +
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKE 172
Query: 407 FVDGITYSII---VLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDW 463
V G TYS++ V + R D+V + I GR
Sbjct: 173 NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNT---AISLCGR--- 226
Query: 464 TDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILT--GS 521
+ +V E + + +V++ + I +S ++SI G
Sbjct: 227 ----INNVYETERIWRVMKGDGHIGTEI------------------TYSLLVSIFVRCGR 264
Query: 522 QDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFD 581
+ LD +D + ++ M + + A ++F Q + +KG +
Sbjct: 265 SELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIF-----QSMLKKGMKP-N 318
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+ NT ++ GK+ L K++ + G P YT+N+++++ K + + +
Sbjct: 319 LVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFD 378
Query: 642 EM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+ E LC + YN + K+G + A +L + G + YN +I+A K+
Sbjct: 379 MIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKS 438
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
+ +E M P+ TY +L+
Sbjct: 439 RKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
+N LL AL KA+ + Q+F + + L+ + YN + + G + L ++
Sbjct: 356 TWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYE 415
Query: 265 MPGPDLC----TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
M G L +YN +IS K K K AL+V+E + +P+ FTY +L++ C
Sbjct: 416 MEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSL 475
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
D I ++ P +YN+ + + + A +L+ KM + G++ +T +
Sbjct: 476 WDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAM 530
Query: 381 LIHGLIKNGR 390
++ L K+ +
Sbjct: 531 MLQNLKKHQK 540
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN---E 635
S D + +S + K LA K+F+ + G+ P N++++S K G +
Sbjct: 281 SLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFK 340
Query: 636 AWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG-GYLDIVMYNTLI 694
++++ +G K D T+N ++ L K R + + D + + L+ +YNT +
Sbjct: 341 VYSVLKSLGHK---PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAM 397
Query: 695 NALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
+ K G ++ K +M+ SG+ +YN +I K+ K A + M C
Sbjct: 398 VSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCK 457
Query: 755 PNHVTDTTL 763
PN T +L
Sbjct: 458 PNTFTYLSL 466
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISV 279
++F ++ KKG + N I++ G G + F ++ + PD T+N L++
Sbjct: 305 KIFQSML-KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTA 363
Query: 280 LCKLGKVKDALIVWEDL---NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGF 336
L K + +D L +++ + N C + + Y T + C K + A ++ +M +G
Sbjct: 364 LYKANRYEDVLQLFDMIRSENLCC--LNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGL 421
Query: 337 RPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
T YN ++ K+ K A ++E MAQ K + TY L+ I
Sbjct: 422 TVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCI 471
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 202 NSIAFNQLLVAL-RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
N+ A N L L R D++ F VF + K+ T Y++ + A ++
Sbjct: 141 NAHACNSFLSCLLRNGDIQKAFT-VFEFMRKKENVTGHT--YSLMLKAVAEVKGCESALR 197
Query: 261 LFHQMPGP-------DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQ 313
+F ++ D+ YN IS+ ++ V + +W + H TY+ L+
Sbjct: 198 MFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVS 257
Query: 314 GCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
+ + + A ++++M NN +++ K K A ++F+ M ++G+K
Sbjct: 258 IFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKP 317
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ N LI+ L K G+ + ++ LK G D T++ ++
Sbjct: 318 NLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALL 361
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 260 SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
S+ + P+L N LI+ L K GKV V+ L + H+PD +T+ L+ K
Sbjct: 309 SMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKAN 368
Query: 320 KIDHATRIFNQMHNNGFRP-GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+ + ++F+ + + +YN+ + K +A +L +M G+ S +Y
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
N++I K+ + + A ++ + ++ + TY +V
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 1/159 (0%)
Query: 583 DMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITE 642
+ + T ++++ + KL A +L+ E+ P S++ ++V+ G+ +A+ + E
Sbjct: 671 ETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLFME 729
Query: 643 MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGR 702
EK C T ++++ L G+ A I L++ LD V YNTLI A+ +AG+
Sbjct: 730 SAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGK 789
Query: 703 IDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
+ ++ +E+M +SG+ + TYNT+I V+ + L A
Sbjct: 790 LQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 565 TPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
+ TPG+ V + + + ++ G L A LF E G DP + T + ++
Sbjct: 699 SKTPGKSV------------IRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILV 746
Query: 625 SSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGY 684
++ +G EA I EK D YN +I+ + + G+ AS I +R+ G
Sbjct: 747 NALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 685 LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKF 744
I YNT+I+ G+ ++D+ + F + SG+ D Y +I + K G + +A
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Query: 745 LKMMLDAGCTPN 756
M G P
Sbjct: 867 FSEMQKKGIKPG 878
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+KG D + ++ ++ +GK A + E ++ + YN+++ + ++ G
Sbjct: 732 EKGCDPGAVT-ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKL 790
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
A I M P I TYN +I G+ + D A I + G YLD +Y +
Sbjct: 791 QCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNM 850
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG- 752
I GK G++ E F +M+ GI P +YN ++++ + + L + + L+ M G
Sbjct: 851 IMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGR 910
Query: 753 CT 754
CT
Sbjct: 911 CT 912
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL-C---TYNCLISVLCKLGKVK 287
+K LDT GYN I A G L + ++ +M + C TYN +ISV + ++
Sbjct: 767 EKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLD 826
Query: 288 DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLL 347
A+ ++ + D YT +I K K+ A +F++M G +PGT YN ++
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+ + E +L + M + G TY LI ++ + A +K+KG
Sbjct: 887 KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 2/176 (1%)
Query: 579 SFDIDMV--NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA 636
+ ++D V NT + L GKL A +++E +GV TYN+++S + + ++A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
I + D Y +I GK G+ A ++ + K+G YN ++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
+ EV++ + M+ +G D+ TY TLI+V++++ +A K + ++ + G
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 241 GYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKL---GKVKDALIVW 293
G +C +A WG + + + + + YN ++S L K GKV D +W
Sbjct: 227 GTMLCTYAR--WGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID---LW 281
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
++ P+ FTYT ++ K + A + F +M + GF P + Y+S++ + KA
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
+A L+E M +G+ S T ++ K A +LF D+++ D +
Sbjct: 342 GDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIR 401
Query: 414 SIIV 417
+I+
Sbjct: 402 GLII 405
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D YN LI + + GK++ A ++E ++ TY T+I + ++D A IF
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+ +G +Y +++ K K+SEA LF +M ++G+K +YN+++ +
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATS 892
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
L +++ G+ D TY ++
Sbjct: 893 RLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 589 LSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLC 648
L ++ GK+ +A + F E G +P + +++ ++ + G + + E+
Sbjct: 195 LRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRI 254
Query: 649 PADIATYNMIIQGLGKIGRADLASAILD---RLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ YN ++ L K ++D ++++G + Y ++++ K G +E
Sbjct: 255 LLSTSVYNFMLSSLQK---KSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEE 311
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
K F +MKS G P+ VTY+++I + KAG + A + M G P++ T T+
Sbjct: 312 ALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P +I + G ++DA ++ + P T + L+ K A I
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
T+ YN+L+ + +A K+ A +++E+M GV S QTYN +I +
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
+ + A +F + ++ G ++D Y+ +++
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
T L + G+ S ++ E + + YN ++SS KK + + + EM E
Sbjct: 227 GTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVE 286
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
+ P + TY +++ K G + A + G + V Y+++I+ KAG ++
Sbjct: 287 EGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEK 346
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+E M+S GI P T T++ ++ K
Sbjct: 347 AIGLYEDMRSQGIVPSNYTCATMLSLYYK 375
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P + TYNS++ F K+ ++A ++ M K C D+ T++ +I G K R D I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ ++G + V Y TLI+ + G +D +M S G+ PD +T++ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 735 AGLLKDAYKFLK 746
L+ A+ L+
Sbjct: 128 KKELRKAFAILE 139
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%)
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
TYN +I G K R D A +LD + +G D+V ++TLIN KA R+D + F +M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
GI + VTY TLI + G L A L M+ G P+++T
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P TYN +I CK +V DA + + + + PD T++TLI G CK ++D+ I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F +MH G T+ Y +L+ + + A L +M GV T++ ++ GL
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 388 NGRPEAAYTLFCDLKK 403
A+ + DL+K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 303 PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL 362
P TY ++I G CK ++D A R+ + M + G P + +++L++ KA +V ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 363 FEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
F +M + G+ A+ TY LIHG + G +AA L ++ G D IT+ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 688 VMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKM 747
+ YN++I+ K R+D+ + + M S G +PDVVT++TLI + KA + + +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 748 MLDAGCTPNHVTDTTL 763
M G N VT TTL
Sbjct: 71 MHRRGIVANTVTYTTL 86
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
F GV P T+N ++ SF K G + + +++ M ++ TYN++I+ GK GR
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
+ + ++ QG + + Y +L+NA KAG + +++ Q+ +S + D +N
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+I + +AG L + M + C P+ +T T+
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATM 467
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE-KLCPADIATYNMIIQGL 662
LFE+ G+ P Y S++S + K ++A++ + M C D+ T+ ++I
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCC 225
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN-PD 721
K+GR DL +I+ + G V YNT+I+ GKAG +E+ M G + PD
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 722 VVTYNTLI 729
V T N++I
Sbjct: 286 VCTLNSII 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 5/186 (2%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +S G+ L + + GV + TYN+I+ + K G F E +++
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 641 TEM---GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINAL 697
+M G+ L D+ T N II G + R G DI +N LI +
Sbjct: 274 ADMIEDGDSL--PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 698 GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
GKAG ++ + M+ + VTYN +IE KAG ++ + M G PN
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 758 VTDTTL 763
+T +L
Sbjct: 392 ITYCSL 397
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 12/223 (5%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATR 326
P + Y LISV K + A E + + + +PD FT+T LI CCK + D
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG--VKASCQTYNILIHG 384
I +M G T+ YN+++D KA E + M ++G + C +I+ G
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII--G 294
Query: 385 LIKNGRP----EAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
NGR E+ Y+ F + G D T++I++L R
Sbjct: 295 SYGNGRNMRKMESWYSRF---QLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 351
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRW 483
F + VT ++ K GR + D + + ++ + P + +
Sbjct: 352 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITY 394
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 4/220 (1%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL---ATS 258
+++ +N ++ KA M E + V +++ D N I ++G ++ +
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 259 FSLFHQMP-GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCK 317
+S F M PD+ T+N LI K G K V + + TY +I+ K
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 318 TYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
+I+ +F +M G +P +I Y SL++ KA V + + ++ V
Sbjct: 369 AGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPF 428
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+N +I+ + G L+ ++++ D IT++ ++
Sbjct: 429 FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 258 SFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH----------- 301
+ +F+QM G PD+ Y+C+ L + G +K+ L V E +
Sbjct: 274 ALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNW 333
Query: 302 ----QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
+PD Y ++ C T + + +F ++ NG RP Y ++V+ ++ K
Sbjct: 334 DPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFD 393
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
F KM G TY +L+ L + G+ E A D+++KG G Y
Sbjct: 394 RVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVY 449
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 19/208 (9%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ + +LL L A E Q+F++++ + D Y+ G G L +
Sbjct: 254 SRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKV 313
Query: 262 FHQMPG-------------------PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQ 302
+M PDL YN +++ + K V+ +L +
Sbjct: 314 IERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLR 373
Query: 303 PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL 362
P+ TY ++ ++ K D F +M ++G P I Y L+ L++ K+ EA +
Sbjct: 374 PNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEA 433
Query: 363 FEKMAQEGVKASCQTYNILIHGLIKNGR 390
M Q+GV + Y L L NGR
Sbjct: 434 VRDMEQKGVIGTGSVYYELACCLCNNGR 461
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 220/553 (39%), Gaps = 73/553 (13%)
Query: 207 NQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMP 266
N+L+ A K + +QVF K+ + + TW N + G L + SLF MP
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIY---TW--NSVVTGLTKLGFLDEADSLFRSMP 113
Query: 267 GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR 326
D CT+N ++S + + ++AL + ++ + +++ +++ C ++ +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
+ + + + F + ++L+D+ K V++A ++F++M V ++N LI
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV----VSWNSLITCFE 229
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLV 446
+NG A +F + + D +T + ++
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISA-------------------------CA 264
Query: 447 TITSLMVGIHKHGRWDWTDRLMKHVREG----DLVPKVLRWKAGM----EASIKN---PP 495
+++++ VG HGR D+L + D+ K R K I+N
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 496 SKKKDYSPMFPSKGD---FSEIMSILTGSQDANLDSHDTKIEDEEG-------DEWSLSP 545
S Y+ +K F+++ S +A + + E+EE S+ P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 546 HMDKLANQVKSS--------GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGK 597
AN +K+ G + + G + Q D DI + N+ + +++ G
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED--DIFVGNSLIDMYVKCGC 442
Query: 598 LSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNM 657
+ +F E D VS +N+++ F + GY NEA + EM E D T
Sbjct: 443 VEEGYLVFRKMMER--DCVS--WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIV-MYNTLINALGKAGRIDEVNKFFEQMKSS 716
++ G G + + + G + Y +++ LG+AG ++E E+M
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP-- 556
Query: 717 GINPDVVTYNTLI 729
+ PD V + +L+
Sbjct: 557 -MQPDSVIWGSLL 568
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
++G + + NS++ +VK G E + + +M E+ C ++N +I G + G +
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC----VSWNAMIIGFAQNGYGN 475
Query: 670 LASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-KSSGINPDVVTYNTL 728
A + +L+ G D + +++A G AG ++E +F M + G+ P Y +
Sbjct: 476 EALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCM 535
Query: 729 IEVHSKAGLLKDAYKFLKMM 748
+++ +AG L++A ++ M
Sbjct: 536 VDLLGRAGFLEEAKSMIEEM 555
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
+M+ +++G EA +I + E+ + TY ++ L + +++ ++ K G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D +++N +INA ++G +D+ K FE+MK SG P T+NTLI+ + K G L+++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 743 KFLKMML-DAGCTPNHVT 759
+ L MML D PN T
Sbjct: 445 RLLDMMLRDEMLQPNDRT 462
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 155/387 (40%), Gaps = 38/387 (9%)
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
L++GLI+ GRP+ A+++F L ++G ITY+ +V G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
D + +++ + G D ++ + ++E P AS N + K
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPT---------ASTFN--TLIKG 433
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
Y + G E +L D + DE L P+ D+ N + +
Sbjct: 434 YGKI----GKLEESSRLL-----------DMMLRDE-----MLQPN-DRTCN-ILVQAWC 471
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA----GVDPV 616
+Q V + S D+V TF ++ A ++ C ++ V P
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVV-TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 617 SYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILD 676
T +I++ + ++G EA M E ++ +N +I+G I D ++D
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD 590
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
+ + G D+V ++TL+NA G + + + M GI+PD+ ++ L + +++AG
Sbjct: 591 LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAG 650
Query: 737 LLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+ A + L M G PN V T +
Sbjct: 651 EPEKAEQILNQMRKFGVRPNVVIYTQI 677
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
++ T ++ + +GK+ A + F E GV P + +NS++ F+ + ++
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M E D+ T++ ++ +G I +L+ G DI ++ L +A
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD-AGCTPNHVT 759
G ++ + QM+ G+ P+VV Y +I AG +K A + K M G +PN T
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTT 709
Query: 760 DTTL 763
TL
Sbjct: 710 YETL 713
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 134/327 (40%), Gaps = 29/327 (8%)
Query: 116 SFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIF 175
++ L+ +L +FH L ++ ++ ++ L+P +++N+++ AS + ++ A IF
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVE-KNGLKP--DTILFNAIINASSESGNLDQAMKIF 412
Query: 176 LKLIE--------LFXXXXXXXXXXAALDSNSN------------SNSIAFNQLLVALRK 215
K+ E F L+ +S N N L+ A
Sbjct: 413 EKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCN 472
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL-----FHQMPGPDL 270
E + +K M G D +N A+ G T+ + H P++
Sbjct: 473 QRKIEEAWNIVYK-MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 271 CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQ 330
T +++ C+ GK+++AL + + P+ F + +LI+G +D + +
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 331 MHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGR 390
M G +P + +++L++ + +++ M + G+ ++IL G + G
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 391 PEAAYTLFCDLKKKGQFVDGITYSIIV 417
PE A + ++K G + + Y+ I+
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQII 678
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 70/130 (53%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ + L++ L + G+ ++A ++ L H+P TYTTL+ + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
+++ NG +P TI++N++++ ++ + +A ++FEKM + G K + T+N LI G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 389 GRPEAAYTLF 398
G+ E + L
Sbjct: 438 GKLEESSRLL 447
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ + FL + ++ ++ E GV P T++++M+++ G I T+M E
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
DI ++++ +G + G + A IL+++ K G ++V+Y +I+ AG + +
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 706 VNKFFEQMKS-SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ +++M G++P++ TY TLI +A A + LK M P T
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
PD+ T++ L++ +G +K ++ D+ PD ++ L +G + + + A +I
Sbjct: 599 PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ-EGVKASCQTYNILIHGLI 386
NQM G RP ++Y ++ A ++ +A Q+++KM G+ + TY LI G
Sbjct: 659 LNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFG 718
Query: 387 KNGRPEAAYTLFCDLKKK 404
+ +P A L D++ K
Sbjct: 719 EAKQPWKAEELLKDMEGK 736
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%)
Query: 650 ADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKF 709
D+ + ++ GL + GR A +I + L+++G ++ Y TL+ AL + +
Sbjct: 317 GDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 710 FEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
+++ +G+ PD + +N +I S++G L A K + M ++GC P T TL
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTL 430
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 260 SLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+L + P L TY L++ L + L + + +PD + +I ++
Sbjct: 344 TLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 403
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ-EGVKASCQTY 378
+D A +IF +M +G +P +N+L+ K K+ E+ +L + M + E ++ + +T
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
NIL+ + E A+ + ++ G D +T++ +
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/504 (19%), Positives = 205/504 (40%), Gaps = 45/504 (8%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK 320
+F +M ++ T+ LIS + + L ++ + QP+ FT+ + +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 321 IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNI 380
++ + NG V NSL+++ K V +A LF+K + V T+N
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV----VTWNS 265
Query: 381 LIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
+I G NG A +F ++ + +++ ++ G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 441 FVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKD 500
F+ D T+LMV K RL K + V V+ W A + ++N K++
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDG--KEE 380
Query: 501 YSPMF---------PSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLA 551
+F P++ +S I++ L + + + K E ++ +
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS--TVGTALLDAY 438
Query: 552 NQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEA 611
++ A+++F+ G D DI + L+ + G+ A K+F T+
Sbjct: 439 VKLGKVEEAAKVFS----------GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 612 GVDPVSYTYNSIMS------SFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
G+ P +T++SI++ + + +G +AI + + LC + + ++ K
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS-----SALLTMYAKK 543
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
G + A + R ++ D+V +N++I+ + G+ + F++MK + D VT+
Sbjct: 544 GNIESAEEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 726 NTLIEVHSKAGLLKDAYKFLKMML 749
+ + AGL+++ K+ +M+
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMV 623
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 108/619 (17%), Positives = 237/619 (38%), Gaps = 71/619 (11%)
Query: 120 LLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLI 179
L+ + + NF + ++ D +++R+++ + +L+ RN+ ++F+++
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVV-------TWTTLISGYARNSMNDEVLTLFMRM- 185
Query: 180 ELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDT 239
+ + NS F L L + + QV H ++ K G
Sbjct: 186 ---------------QNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTI 229
Query: 240 WGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNAC 299
N I+ + G++ + LF + + T+N +IS G +AL ++ +
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 300 AHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEA 359
+ ++ ++I+ C ++ ++ + GF + +L+ K T + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 360 CQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQ 419
+LF+++ G + ++ +I G ++N E A LF ++K+KG + TYS+I+
Sbjct: 350 LRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 420 XXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK 479
R V T+L+ K G+ + ++ + + D+V
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVG----TALLDAYVKLGKVEEAAKVFSGIDDKDIVA- 461
Query: 480 VLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGD 539
W A + Y+ ++ + G N
Sbjct: 462 ---WSAMLAG-----------YAQTGETEAAIKMFGELTKGGIKPN-------------- 493
Query: 540 EWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLS 599
E++ S ++ A S G Q G ++ + S + + L+++ KG +
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFH----GFAIKSRLDSSLCVS--SALLTMYAKKGNIE 547
Query: 600 LACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMII 659
A ++F+ E D VS +NS++S + + G +A + EM ++ D T+ +
Sbjct: 548 SAEEVFKRQREK--DLVS--WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNT-LINALGKAGRIDEVNKFFEQMKSSGI 718
G + D +++ +N+ +++ +AG++++ K E M +
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 719 NPDVVTYNTLIEVHSKAGL 737
+ T VH K L
Sbjct: 664 STIWRTILAACRVHKKTEL 682
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 126/573 (21%), Positives = 232/573 (40%), Gaps = 106/573 (18%)
Query: 205 AFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQ 264
A N+ L + ++ E + +F KL A +T +N I + ++ + LF
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLE-----ARNTVTWNTMISGYVKRREMNQARKLFDV 96
Query: 265 MPGPDLCTYNCLISVLCKLGKVK---DALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
MP D+ T+N +IS G ++ +A +++++ + D F++ T+I G K +I
Sbjct: 97 MPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRI 152
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A +F +M + +++++ + +V A LF KM + C L
Sbjct: 153 GEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCA----L 204
Query: 382 IHGLIKNGR-PEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRG 440
+ GLIKN R EAA+ L + G V G
Sbjct: 205 VAGLIKNERLSEAAWV----LGQYGSLVSGRE---------------------------- 232
Query: 441 FVVDLV-TITSLMVGIHKHGRWDWTDRLMKHVRE--GD---------LVPKVLRWKAGME 488
DLV +L+VG + G+ + L + + GD V+ W + ++
Sbjct: 233 ---DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 489 ASIKNPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDS--HDTKIEDEEGDEWSLSPH 546
A +K + ++ F ++ T S + +D H +++ED +S P+
Sbjct: 290 AYLK--------VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFA-LFSEMPN 340
Query: 547 MDKLANQVKSSGYAS--------QLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKL 598
D + + SGYAS F TP +K + S+ N+ ++ +
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTP-----EKHTVSW-----NSIIAAYEKNKDY 390
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI-ITEMGEKLCPADIATYNM 657
A LF G P +T S++S+ G N + + ++ K D+ +N
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSA--STGLVNLRLGMQMHQIVVKTVIPDVPVHNA 448
Query: 658 IIQGLGKIGRADLASAILDRL-LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS 716
+I + G + I D + LK+ +++ +N +I G E F MKS+
Sbjct: 449 LITMYSRCGEIMESRRIFDEMKLKR----EVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 717 GINPDVVTYNTLIEVHSKAGLLKDA-YKFLKMM 748
GI P +T+ +++ + AGL+ +A +F+ MM
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFVSMM 537
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 46/246 (18%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
N +++N ++ A K + + +F ++ D+ DT +N I + + +F+L
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR-----DTISWNTMIDGYVHVSRMEDAFAL 334
Query: 262 FHQMPGPDLCTYNCLISVLCKLGKV-------------------------------KDAL 290
F +MP D ++N ++S +G V K+A+
Sbjct: 335 FSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 291 IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFR---PGTIVYNSLL 347
++ +N +PD T T+L+ + R+ QMH + P V+N+L+
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNL----RLGMQMHQIVVKTVIPDVPVHNALI 450
Query: 348 DVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQF 407
+ + ++ E+ ++F++M +K T+N +I G +G A LF +K G +
Sbjct: 451 TMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 408 VDGITY 413
IT+
Sbjct: 508 PSHITF 513
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 105/526 (19%), Positives = 216/526 (41%), Gaps = 72/526 (13%)
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACA-HQPDHFTYTTLIQGCCKTYKIDHATRI 327
D+ +N L+S K D L V++ L C+ PD FT+ +I+ + I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
+ +G+ +V +SL+ + K + Q+F++M + V ++N +I +
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV----ASWNTVISCFYQ 185
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVT 447
+G E A LF ++ G + ++ ++ + +GF +D
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 448 ITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSK-------KKD 500
++L + +G+ D + + + V + ++ W + ++ + SK +
Sbjct: 246 NSAL---VDMYGKCDCLE-VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 501 YSPMFPSKGDFSEIMSILTGSQDANLDS----HDTKIEDEEGDEWSLSPHMDKLANQVKS 556
PS+ + I+ + S+ NL H I + ++ + L +
Sbjct: 302 IEGTRPSQTTLTSIL--MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 557 SGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPV 616
+ A +F+ T Q+ ++S+++ M+++++S+ G A ++++ GV P
Sbjct: 360 ANLAETVFSKT-----QKDVAESWNV-MISSYISV----GNWFKAVEVYDQMVSVGVKPD 409
Query: 617 SYTYNSIMSS-----------------------------------FVKKGYFNEAWAIIT 641
T+ S++ + + K G EA+ I
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+ +K D+ ++ ++I G G+ A D + K G D V +++A G AG
Sbjct: 470 SIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 702 RIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
IDE KFF QM+S GI P + Y+ +I++ +AG L +AY+ ++
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQ 660
C +F + Y +NS+MS + K F++ + + +C D T+ +I+
Sbjct: 56 CSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK 115
Query: 661 GLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 720
G +GR L I ++K G D+V+ ++L+ K + + F++M
Sbjct: 116 AYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP----ER 171
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTT 762
DV ++NT+I ++G + A + M +G PN V+ T
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTV 213
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKL 283
++ H L+ K G+ D + + + + S +F +MP D+ ++N +IS +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G+ + AL ++ + + +P+ + T I C + ++ I + GF V
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNG 389
++L+D+ K + A ++F+KM ++ + A +N +I G + G
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVA----WNSMIKGYVAKG 288
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/448 (18%), Positives = 173/448 (38%), Gaps = 16/448 (3%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
NS++ + A + + LE + H+ KKGF LD + + + +G L + +
Sbjct: 207 NSVSLTVAISACSRL-LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 262 FHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
F +MP L +N +I G K + + + +P T T+++ C ++ +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
H I + + V SL+D+ FK + + A +F K K +++N++
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ----KDVAESWNVM 381
Query: 382 IHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
I I G A ++ + G D +T++ ++
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEA--SIKNPPSKKK 499
D + +++L+ K G R+ + + D+V W + A S P
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS----WTVMISAYGSHGQPREALY 497
Query: 500 DYSPM--FPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSS 557
+ M F K D ++++L+ A L K + ++ + P ++ + +
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
G A +L + +QQ S + ++++T S + SL ++ + E D S
Sbjct: 558 GRAGRLLEAY--EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAS 615
Query: 618 YTYNSIMSSFVKKGYFNEAWAIITEMGE 645
TY + + + ++ A + +M E
Sbjct: 616 -TYMVLFNLYASGESWDAARRVRLKMKE 642
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 17/257 (6%)
Query: 223 QQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPD----LCTYNCLIS 278
+Q ++ M K+GFA I +G G + +F +MP D + ++N L+S
Sbjct: 99 EQKKYRDMSKEGFAAR------IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 279 VLCKLGKVKDALIVWEDLNAC----AHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
+L K D +V E N + +PD +Y TLI+ C+ + A + +++ N
Sbjct: 153 AY-RLSKKFD--VVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK 209
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
G +P + +N+LL + + +++ KM ++ V +TYN + GL + +
Sbjct: 210 GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKEL 269
Query: 395 YTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVG 454
LF +LK G D +++ ++ G+ D T L+
Sbjct: 270 VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
Query: 455 IHKHGRWDWTDRLMKHV 471
+ K G ++ L K
Sbjct: 330 MCKAGDFESAIELFKET 346
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 586 NTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N LS + K + +LF E+ + + P +YN+++ + +K EA A++ E+
Sbjct: 148 NALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIE 207
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
K DI T+N ++ G+ +L I +++++ +DI YN + L +
Sbjct: 208 NKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSK 267
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
E+ F ++K+SG+ PDV ++N +I G + +A + K ++ G P+ T
Sbjct: 268 ELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKAT 322
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 562 QLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYN 621
+LF PG K S DI NT + K L A L + G+ P T+N
Sbjct: 165 ELFNELPG-----KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFN 219
Query: 622 SIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
+++ S KG F I +M EK DI TYN + GL ++ + L
Sbjct: 220 TLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKAS 279
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
G D+ +N +I G++DE +++++ G PD T+ L+ KAG + A
Sbjct: 280 GLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESA 339
Query: 742 YKFLK 746
+ K
Sbjct: 340 IELFK 344
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
+++N L+ AL + D E + ++ + KG D +N + + G ++
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEI-ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWA 239
Query: 264 QMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
+M D+ TYN + L K K+ + ++ +L A +PD F++ +I+G
Sbjct: 240 KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K+D A + ++ +G+RP + LL + KA A +LF++ + T
Sbjct: 300 KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQ 359
Query: 380 ILIHGLIKNGRPEAA 394
L+ L+K + E A
Sbjct: 360 QLVDELVKGSKREEA 374
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 204 IAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH 263
++FN LL A R + +++F++L K D YN I A L + +L
Sbjct: 145 LSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLD 204
Query: 264 QMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTY 319
++ PD+ T+N L+ G+ + +W + D TY + G
Sbjct: 205 EIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264
Query: 320 KIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
K +F ++ +G +P +N+++ K+ EA ++++ + G + T+
Sbjct: 265 KSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFA 324
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+L+ + K G E+A LF + K V T +V
Sbjct: 325 LLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+KG DI + N + ++ G + A +F V ++N+I+S + + G+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV----ISWNTIISGYAQNGFA 431
Query: 634 NEA---WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
+EA + I+ E GE A+ T+ ++ + G + RLLK G YLD+ +
Sbjct: 432 SEAIEMYNIMEEEGE--IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
+L + GK GR+++ F Q+ + V +NTLI H G + A K MLD
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 751 AGCTPNHVTDTTL 763
G P+H+T TL
Sbjct: 546 EGVKPDHITFVTL 558
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKV 286
H L K GF D + IH + + + + LF +MP D+ ++N +IS C+ G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 287 KDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
K+AL + L A D T +L+ C + + I + +G V N L
Sbjct: 233 KEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLK 402
+D+ + ++ + ++F++M + ++N +I N +P A +LF +++
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLI----SWNSIIKAYELNEQPLRAISLFQEMR 340
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 212 ALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLC 271
ALR+ MKL H + K G LD + +G G L + SLF+Q+P +
Sbjct: 466 ALRQG-MKL------HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
+N LI+ G + A+++++++ +PDH T+ TL+ C + +D F M
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 332 HNN-GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
+ G P Y ++D+ +A ++ A + + M+
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 545 PHMDKLANQVKSSGYASQLFTPTPGQR---VQQKGSDSFDIDMVNTFLSIFLAKGKLSLA 601
P+ D ++ SGYA F + ++++G + + + L G L
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 602 CKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG 661
KL + G+ + S+ + K G +A ++ ++ + +N +I
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR----VNSVPWNTLIAC 526
Query: 662 LGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINP 720
G G + A + +L +G D + + TL++A +G +DE FE M++ GI P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 721 DVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ Y +++++ +AG L+ A KF+K M
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSM 614
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 563 LFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNS 622
+F PG K S D+ NT + KG + A L + G+ P T+N
Sbjct: 163 IFKELPG-----KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNI 217
Query: 623 IMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQG 682
++ KG F E I M EK DI +YN + GL +++ ++ D+L
Sbjct: 218 LLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE 277
Query: 683 GYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAY 742
D+ + +I G++DE ++++++ +G P +N+L+ KAG L+ AY
Sbjct: 278 LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAY 337
Query: 743 KFLKMML 749
+ K +
Sbjct: 338 ELCKEIF 344
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Query: 560 ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSY 618
A ++F P +R ++ + SF N L+ + K L +F E+ + ++P
Sbjct: 125 AQKVFDEMP-ERNCKRTALSF-----NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
+YN+++ KG F EA A+I E+ K D T+N+++ G+ + I R+
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
+++ DI YN + L + +E+ F+++K + + PDV T+ +I+ G L
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKL 298
Query: 739 KDAYKFLKMMLDAGCTP 755
+A + K + GC P
Sbjct: 299 DEAITWYKEIEKNGCRP 315
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 261 LFHQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGC 315
+F ++PG PD+ +YN LI LC G +A+ + +++ +PDH T+ L+
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K + +I+ +M + YN+ L L K E LF+K+ +K
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
T+ +I G + G+ + A T + +++K G
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDL----CTYNCLISVLCKLGK 285
M K+GF I+ +G G + +F +MP + ++N L++ K
Sbjct: 103 MSKEGFVARI------INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKK 156
Query: 286 VKDALIVWEDL-NACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
++++L + +PD +Y TLI+G C A + +++ N G +P I +N
Sbjct: 157 FDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFN 216
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
LL + K E Q++ +M ++ VK ++YN + GL + E +LF LK
Sbjct: 217 ILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGN 276
Query: 405 GQFVDGITYSIIV 417
D T++ ++
Sbjct: 277 ELKPDVFTFTAMI 289
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP----DLCTYNCLISVLCKLGK 285
++ KG D +NI +H G ++ +M D+ +YN + L K
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS 345
++ + +++ L +PD FT+T +I+G K+D A + ++ NG RP V+NS
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 346 LLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
LL + KA + A +L +++ + + ++ L+K + + A
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 196 DSNSNSNSIAFNQLLVAL---RKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW 252
+ N +++FN LL A +K D+ + +F +L K D YN I
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDL---VEGIFKELPGKLSIEPDVASYNTLIKGLCGK 190
Query: 253 GDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
G + +L ++ PD T+N L+ GK ++ +W + + D +Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 309 TTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQ 368
+ G K + +F+++ N +P + +++ K+ EA ++++ +
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 369 EGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G + +N L+ + K G E+AY L ++ K VD +V
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFT---EAGVDPVSYTYNSIMSSFVKKGYFNEAW 637
D + T + ++ G+++ ++ E + P TY +++S+FV G + A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 638 AIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYL-DIVMYNTLINA 696
++ EM PA+ TYN++++G K + D A +L + + G D+V YN +I+
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 697 L----GKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
AG + FF +M++ GI P ++Y TL++ + +G K A + M++
Sbjct: 533 CILIDDSAGAL----AFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
T +S F+ G + A ++ GV TYN ++ + K+ + A ++ EM E
Sbjct: 457 TVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTED 516
Query: 647 L-CPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ +YN+II G I + A A + + +G + Y TL+ A +G+
Sbjct: 517 AGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKL 576
Query: 706 VNKFF-EQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
N+ F E M + D++ +N L+E + + GL++DA + + M + G PN T +L
Sbjct: 577 ANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 11/228 (4%)
Query: 261 LFHQMPGPDLCTYNCLISVLCKLGKVKD------ALIVWEDLNACAHQPDHFTYTTLIQG 314
L ++ PD Y L+ K G+V D A+ +D N+ PD TYTT++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNS---HPDEVTYTTVVSA 461
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-GVKA 373
+D A ++ +M G I YN LL K ++ A L +M ++ G++
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 374 SCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXX 433
+YNI+I G I A F +++ +G I+Y+ ++
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 434 XXXXXRGFV-VDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
V VDL+ L+ G + G + R++ ++E P V
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 201 SNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFS 260
+N I +N LL K + + ++ + G D YNI I D A + +
Sbjct: 485 ANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALA 544
Query: 261 LFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDL-NACAHQPDHFTYTTLIQGC 315
F++M P +Y L+ G+ K A V++++ N + D + L++G
Sbjct: 545 FFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGY 604
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE 369
C+ I+ A R+ ++M NGF P Y SL + + +A K +A L++++ +
Sbjct: 605 CRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 6/192 (3%)
Query: 228 KLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKL 283
+ D + D Y + AF G + + + +M + TYN L+ CK
Sbjct: 441 RRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQ 500
Query: 284 GKVKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIV 342
++ A + ++ A +PD +Y +I GC A FN+M G P I
Sbjct: 501 LQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKIS 560
Query: 343 YNSLLDVLFKATKVSEACQLFEKMAQE-GVKASCQTYNILIHGLIKNGRPEAAYTLFCDL 401
Y +L+ + + A ++F++M + VK +N+L+ G + G E A + +
Sbjct: 561 YTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM 620
Query: 402 KKKGQFVDGITY 413
K+ G + + TY
Sbjct: 621 KENGFYPNVATY 632
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 20/176 (11%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMII 659
A F G+ P +Y ++M +F G A + EM + D+ +NM++
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 660 QGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG-- 717
+G ++G + A ++ R+ + G Y ++ Y +L N + +A + + ++++K
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAV 661
Query: 718 -----------------INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+ PD +TL ++ +A K A + + M + G PN
Sbjct: 662 KKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPN 717
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 54/100 (54%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P + +N+++++ G ++ W + EM E C D+ TYN++I+ ++GR +L +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
L+R++ +G + + ++L+ A G + + + M+
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMR 333
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/521 (19%), Positives = 194/521 (37%), Gaps = 45/521 (8%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
L +NS +S +F L+ A K + +Q+ +L+ G + IHA +GD
Sbjct: 12 LYTNSGIHSDSFYASLI--DSATHKAQLKQIHARLL-VLGLQFSGFLITKLIHASSSFGD 68
Query: 255 LATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
+ + +F +P P + +N +I + +DAL+++ ++ PD FT+ L++
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C + + Q+ GF V N L+ + K ++ A +FE + + +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP--ERT 186
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXX 434
++ ++ +NG P A +F ++K D + ++
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 435 XXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNP 494
G ++ + SL K G+ L ++ P ++ W A + KN
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNG 302
Query: 495 PSKK----------KDYSPMFPSKGDFSEIMSILTG-SQDANLDSHDTKIE-----DEEG 538
+++ KD P D I S ++ +Q +L+ + E D
Sbjct: 303 YAREAIDMFHEMINKDVRP------DTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 539 DEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKL 598
D + S +D A G A +F T + D+ + + + + G+
Sbjct: 357 DVFISSALIDMFAKCGSVEG-ARLVFDRTLDR----------DVVVWSAMIVGYGLHGRA 405
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
A L+ GV P T+ ++ + G E W M + Y +
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
I LG+ G D A ++ + Q G + ++ L++A K
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPG---VTVWGALLSACKK 503
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N +S + G A +F V P + + S +S+ + G +A ++ +G
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
D+ + +I K G + A + DR L + D+V+++ +I G GR E
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRARE 407
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV-TDTTLD 764
+ M+ G++P+ VT+ L+ + +G++++ + F M D P +D
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVID 467
Query: 765 YLGR 768
LGR
Sbjct: 468 LLGR 471
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/528 (20%), Positives = 212/528 (40%), Gaps = 60/528 (11%)
Query: 210 LVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPD 269
L+ LR +D L +Q V H + G LDT+ NI I+ + G + + +F +MP +
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 270 LCTYNCLISVLCKLGKVKDALIVW-EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATR-I 327
L +++ ++S G +++L+V+ E P+ + ++ IQ C +D R +
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS---GLDGRGRWM 166
Query: 328 FNQMHN----NGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
Q+ + +GF V L+D K + A +F+ + ++ S T+ +I
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK----STVTWTTMIS 222
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV 443
G +K GR + LF L + DG S ++ G +
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSP 503
D + L+ K GR +L + +++ W + +N K
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS----WTTLLSGYKQNALHK------ 332
Query: 504 MFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQL 563
E M + T L + D ++ S + A+ + + G+ +Q+
Sbjct: 333 ---------EAMELFTSMSKFGL----------KPDMYACSSILTSCAS-LHALGFGTQV 372
Query: 564 FTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSI 623
T + G+DS+ + N+ + ++ L+ A K+F+IF A V +N++
Sbjct: 373 HAYTIKANL---GNDSY---VTNSLIDMYAKCDCLTDARKVFDIFAAADV----VLFNAM 422
Query: 624 MSSFVKKGY---FNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
+ + + G +EA I +M +L + T+ +++ + L+ I + K
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
G LDI + LI+ + + F++MK D+V +N++
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV----KDLVIWNSM 526
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
++ Q FH + K+G + + N + + G + F D+ +N +IS
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
G+ K AL + E + + +P++ T+ ++ C ++ + F M G P
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE-----AA 394
T Y ++ +L +A ++++A +L EKM K + + L+ G K G E A
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMP---TKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 395 YTLFCDLKKKGQF 407
+ D K G F
Sbjct: 748 MAILSDPKDSGSF 760
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 607 IFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIG 666
+F E V + +NS+ + +V++ EA + E+ D T+ ++ G +
Sbjct: 511 VFDEMKVKDL-VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 667 RADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
L +LLK+G + + N L++ K G ++ +K F+ S + DVV +N
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD----SAASRDVVCWN 625
Query: 727 TLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
++I ++ G K A + L+ M+ G PN++T
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 177/442 (40%), Gaps = 24/442 (5%)
Query: 311 LIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG 370
LI + + A R+FNQ+ P + NSL+ + ++ +A +F +M + G
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFG 112
Query: 371 VKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXX 430
+ A TY L+ + ++K G D Y L
Sbjct: 113 LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD--IYVPNALIDCYSRCGGLGV 170
Query: 431 XXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS 490
+ D V+ S++ G+ K G RL + + DL+ W ++
Sbjct: 171 RDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLIS----WNTMLDGY 226
Query: 491 IK-NPPSKKKDYSPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDK 549
+ SK + P + S ++ S+ +++ D+ L P +
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF-----DKMPL-PAKNV 280
Query: 550 LANQVKSSGYASQLFTPTPGQRVQQKGSDS--FDIDMVNTFLSIFLAKGKLSLACKLFEI 607
+ + +GYA + + V Q + FD V + L+ G LSL ++ I
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
+ + +Y N+++ + K G +A+ + ++ +K D+ ++N ++ GLG G
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGH 396
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE-VNKFFEQMKSSGINPDVVTYN 726
A + R+ ++G D V + ++ + AG IDE ++ F+ K + P V Y
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 727 TLIEVHSKAGLLKDAYKFLKMM 748
L+++ + G LK+A K ++ M
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTM 478
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 579 SFDIDMVNTFLSIFLAKGKLSL--ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA 636
S DI + N + + G L + A KLFE +E D VS+ NS++ VK G +A
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER--DTVSW--NSMLGGLVKAGELRDA 204
Query: 637 WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA 696
+ EM ++ D+ ++N ++ G + A + +++ ++ + V ++T++
Sbjct: 205 RRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMG 256
Query: 697 LGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAG 752
KAG ++ F++M N VVT+ +I +++ GLLK+A + + M+ +G
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKN--VVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGD 254
D + I++N +L + + ++F K+ ++ +T ++ + + GD
Sbjct: 208 FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER-----NTVSWSTMVMGYSKAGD 262
Query: 255 LATSFSLFHQMPGP--DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
+ + +F +MP P ++ T+ +I+ + G +K+A + + + A + D +++
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
C ++ + RI + + + V N+LLD+ K + +A +F + K
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP----K 378
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
++N ++HGL +G + A LF ++++G D +T+
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 199 SNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATS 258
S +++++N +L L KA + +++F ++ + D +N + + +++ +
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR-----DLISWNTMLDGYARCREMSKA 235
Query: 259 FSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKT 318
F LF +MP + +++ ++ K G ++ A ++++ + A + T+T +I G +
Sbjct: 236 FELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEK 293
Query: 319 YKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTY 378
+ A R+ +QM +G + S+L ++ +S ++ + + + ++
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL 353
Query: 379 NILIHGLIKNGRPEAAYTLFCDLKKK 404
N L+ K G + A+ +F D+ KK
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKK 379
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 118/281 (41%), Gaps = 7/281 (2%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
FN +L+++ + +E + +L+ + G D Y I + G + F +FHQM
Sbjct: 470 FN-MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
+L T+ LI + G+V A + L + +PD + LI C ++ +
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 322 DHATRIFNQM--HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYN 379
D A + +M + P I +L+ A +V A ++++ + + G++ + + Y
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Query: 380 ILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXR 439
I ++ K+G + A +++ D+K+K D + +S ++ +
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKV 480
G + ++ +SLM W L + ++ L P +
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTI 749
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 6/222 (2%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P + T+N L+SV ++ A V + D YTTLI C K+ K+D +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIK 387
F+QM N+G + +L+D +A +V++A + + + VK +N LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 388 NGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVV---- 443
+G + A+ + ++K + +D SI L + +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 444 DLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKA 485
++ TI + K G WD+ + K ++E D+ P + + A
Sbjct: 645 EVYTIA--VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N +S+ + + A + + E+G+ Y +++SS K G + + + +M
Sbjct: 471 NMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSN 530
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
A++ T+ +I G + G+ A L + D V++N LI+A G++G +D
Sbjct: 531 SGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDR 590
Query: 706 VNKFFEQMKSSG--INPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+MK+ I+PD ++ L++ AG ++ A + +M+
Sbjct: 591 AFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 135/354 (38%), Gaps = 67/354 (18%)
Query: 110 VVLHP--QSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNNH 167
++L+P +FN L+ S + +L +Q+ + C +Y +L+ + ++
Sbjct: 461 LILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGM-TADCK--LYTTLISSCAKSGK 517
Query: 168 IPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVF- 226
+ F +F ++ +S +N F L+ +A + + F
Sbjct: 518 VDAMFEVFHQMS----------------NSGVEANLHTFGALIDGCARAG---QVAKAFG 558
Query: 227 -HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG------PDLCTYNCLISV 279
+ ++ K D +N I A G G + +F + +M PD + L+
Sbjct: 559 AYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
Query: 280 LCKLGKVKDALIVWE----------------DLNACAHQ-------------------PD 304
C G+V+ A V++ +N+C+ PD
Sbjct: 619 CCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 305 HFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFE 364
++ LI +D A I + G R GTI Y+SL+ A +A +L+E
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 365 KMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
K+ ++ + T N LI L + + A ++K G + ITYS+++L
Sbjct: 739 KIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLML 792
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIIT 641
+DM + + F K A K FT+ ++P T+N +MS A ++
Sbjct: 432 LDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLR 491
Query: 642 EMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAG 701
+ E AD Y +I K G+ D + ++ G ++ + LI+ +AG
Sbjct: 492 LVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAG 551
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
++ + + ++S + PD V +N LI ++G + A+ L M
Sbjct: 552 QVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM 598
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADI--A 653
G+++ A + I V P +N+++S+ + G + A+ ++ EM + P D
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 654 TYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM 713
+ +++ G+ + A + + K G +Y +N+ K+G D ++ M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 714 KSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKL 773
K + PD V ++ LI+V A +L +A+ L+ G ++ ++L +G +
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL--MGACCNAK 728
Query: 774 RYQKASILNEK 784
++KA L EK
Sbjct: 729 DWKKALELYEK 739
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%)
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
++T+NM++ + A +L + + G D +Y TLI++ K+G++D + + F
Sbjct: 467 MSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFH 526
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
QM +SG+ ++ T+ LI+ ++AG + A+ ++ P+ V
Sbjct: 527 QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 2/190 (1%)
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
R+ Q+ + D + T +S GK+ ++F + +GV+ +T+ +++ +
Sbjct: 491 RLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARA 550
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDI--V 688
G +A+ + K D +N +I G+ G D A +L + + +D +
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
L+ A AG+++ + ++ + GI Y + SK+G A K M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 749 LDAGCTPNHV 758
+ TP+ V
Sbjct: 671 KEKDVTPDEV 680
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 232 KKGFALDTWGYNICIHAFGCWGDLATSFSLF---HQMPGPDLCTYNCLISVLCKLGKVKD 288
+K F +D +NI + AF ++ + S+F H PD+ T N L+ + G V
Sbjct: 171 RKKFGVDE--FNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTA 228
Query: 289 ALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLD 348
+ + ++ +P+ TY I G CK A R+F M F + +L+
Sbjct: 229 TELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIH 288
Query: 349 VLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFV 408
A +A QLF+++++ G+ C YN L+ L+K G A + ++++KG
Sbjct: 289 GSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP 348
Query: 409 DGITY 413
D +T+
Sbjct: 349 DSVTF 353
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
FN LL A E + +F KL + F D NI + F GD+ + +H+M
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR--FNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 266 PG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKI 321
P+ TY I CK +AL ++ED++ TTLI G
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 322 DHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNIL 381
A ++F+++ G P YN+L+ L K VS A ++ ++M ++G++ T++ +
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 382 IHGLIKNGRPEAAYTLFCDLKKK 404
G++K+ E + C+ +K
Sbjct: 357 FIGMMKS--KEFGFNGVCEYYQK 377
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +N L F G ++ + + G P S TY + F KK F EA +
Sbjct: 209 DVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLF 268
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
+M + +I G G A + D + K+G D YN L+++L K
Sbjct: 269 EDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKC 328
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
G + K ++M+ GI PD VT++++
Sbjct: 329 GDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAI 639
F +D N L F + ++ A +FE + +P T N ++ F + G
Sbjct: 174 FGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELF 232
Query: 640 ITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLD----IVMYNTLIN 695
EM ++ + TY + I G K + + A+ RL + LD + + TLI+
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCK--KRNFGEAL--RLFEDMDRLDFDITVQILTTLIH 288
Query: 696 ALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTP 755
G A + + F+++ G+ PD YN L+ K G + A K +K M + G P
Sbjct: 289 GSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP 348
Query: 756 NHVT 759
+ VT
Sbjct: 349 DSVT 352
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNA-CAHQPDHFTYTTLIQGCCKTYKIDHATR 326
P+ T+N ++ + G+ + +W ++ P+ ++Y L++ C + A +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 327 IFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLI 386
++ +M G + YN+++ L +V +A +LF M +G++ +C TY L++G
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
K G ++ ++ ++K+KG DG+T +V
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 586 NTFLSIFLAKGKLSLACKLF-EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMG 644
N+ + F +G+ + +++ E+ E G P Y+YN +M ++ +G +EA + EM
Sbjct: 249 NSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMK 308
Query: 645 EKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRID 704
+ DI YN +I GL A + + +G + Y L+N KAG +D
Sbjct: 309 VRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVD 368
Query: 705 EVNKFFEQMKSSGINPDVVTYNTLIE----------VHSKAGLLKDAYK 743
+ +MK G D +T L+E V A ++KDA +
Sbjct: 369 SGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVR 417
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGLGKIGRADLA 671
+ P + T+NS+M SF ++G I EM E++ C ++ +YN++++ G A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+ + + +G DIV YNT+I L + + + F M GI +TY L+
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 732 HSKAG 736
+ KAG
Sbjct: 361 YCKAG 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
P++ +YN L+ C G + +A VWE++ D Y T+I G C +++ A +
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGL 385
F M G + Y L++ KA V ++ +M ++G +A T L+ GL
Sbjct: 339 FRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 26/247 (10%)
Query: 146 LQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIA 205
++P T +NS++++ R + I+ ++ E + + N +
Sbjct: 241 IKPNATT--FNSMMVSFYREGETEMVERIWREMEE---------------EVGCSPNVYS 283
Query: 206 FNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQM 265
+N L+ A + E ++V+ + M +G D YN I ++ + LF M
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEE-MKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 266 PGPDL---C-TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYK- 320
+ C TY L++ CK G V L+V+ ++ + D T L++G C
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 321 ---IDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQT 377
++ A + + + F P Y L+ L + K+ A + +M +G K S +T
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 378 YNILIHG 384
Y I G
Sbjct: 463 YRAFIDG 469
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 159 LIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAA----LDSNSNSNSIAFNQLLVALR 214
++A R++ PL IF LI+++ + L+ N N++L L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL- 164
Query: 215 KADMKLEFQQVFHKLMDKK--GFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----P 268
+ Q+ F + G +T YN+ + AF DL+ ++ LF +M P
Sbjct: 165 -VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
D+ +Y LI C+ G+V A+ + +D+ PD TLI G C D +
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYL 279
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
+M + GF P V N L+ KV EAC + E + + G T+ ++I
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 585 VNTFLSIFLA-KGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEM 643
+N L + ++ +G L A +LF+ GV P + +YN +M +F + A+ + +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
E+ D+ +Y ++IQG + G+ + A +LD +L +G D TLI L G
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMF 272
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCT 754
DE K+ E+M S G +P N L++ G +++A +++++ G T
Sbjct: 273 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 323
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 218/538 (40%), Gaps = 62/538 (11%)
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKV 286
H L GF + + N + + L+ + +F +M D+ ++N +I KLGK
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 287 KDALIVWEDL-NACAHQPDHFTYTTLIQGCCK--TYKID---HATRIFNQMHNNGFRPGT 340
K AL ++ + N +PD+ T ++ C T+ + H + ++M N F
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF---- 265
Query: 341 IVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
V N L+D+ K + EA +F M+ + V ++N ++ G + GR E A LF
Sbjct: 266 -VGNCLVDMYAKCGMMDEANTVFSNMSVKDV----VSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 401 LKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGR 460
++++ +D +T+S + G + VT+ S++ G G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 461 WDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIMSILTG 520
+ H +E +IK P +K+ G E M I
Sbjct: 381 -------LMHGKEIHCY------------AIKYPIDLRKN--------GHGDENMVI--- 410
Query: 521 SQDANLDSHDTKIEDEEGDEWSLSP-HMDKLANQVKSSGY--------ASQLFTPTPGQR 571
+Q ++ + K++ SLSP D + V GY A +L + +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 572 VQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKG 631
Q + ++F I LA ++ + + + P+ + N ++ + K G
Sbjct: 471 CQTR-PNAFTISCA-LVACASLAALRIGKQIHAYALRNQQNAVPL-FVSNCLIDMYAKCG 527
Query: 632 YFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYN 691
++A + M K + T+ ++ G G G + A I D + + G LD V
Sbjct: 528 SISDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 692 TLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
++ A +G ID+ ++F +MK+ G++P Y L+++ +AG L A + ++ M
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 580 FDIDMVNTFLSIFLAKGKLSLACKLFEIFT-EAGVDPVSYTYNSIMSSFVKKGYFN---- 634
+D+ N+ + + GK +A ++F T E G P + T +++ G +
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 635 -EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+A+ +EM + ++ N ++ K G D A+ + + + D+V +N +
Sbjct: 251 LHCFAVTSEMIQ-----NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAM 301
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGC 753
+ + GR ++ + FE+M+ I DVVT++ I +++ GL +A + ML +G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 754 TPNHVT 759
PN VT
Sbjct: 362 KPNEVT 367
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/540 (19%), Positives = 214/540 (39%), Gaps = 57/540 (10%)
Query: 216 ADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNC 275
A+ L + H L K A T+ N ++ + G L+ + + F+ P++ +YN
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
++ K K+ A +++++ QPD +Y TLI G + A +F +M G
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
F + L+ + + F G + N + K G A
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLIKQLHCFS--VSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 396 TLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGI 455
++F + + D ++++ +++ +GF +D+ T+ S++ +
Sbjct: 194 SVFYGMD---ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 456 HKHGRWDWTDRLMKHVR-EGDLVPKVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEI 514
D L+ + G L+ + + + + + SK M+ S+ F EI
Sbjct: 251 TS------LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 515 MSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLFTPTPGQRVQQ 574
+S +L +T I +E LS K Q+ QR+
Sbjct: 305 LS-------PDLVVWNTMISGYSMNE-ELSEEAVKSFRQM---------------QRIGH 341
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSL--ACKLFE---IFTEAGVDPVSYTYNSIMSSFVK 629
+ D +F+ + A LS CK I + + +S N+++S + K
Sbjct: 342 RPDDC-------SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN-NALISLYYK 393
Query: 630 KGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVM 689
G +A + M E + ++N +I+G + G A + R+L G + +
Sbjct: 394 SGNLQDARWVFDRMPE----LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 690 YNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ +++A G++DE ++F MK + I P+ Y+ +I++ +AG L++A +F+ M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 177/491 (36%), Gaps = 83/491 (16%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY-TTLIQGCCKTYKID--HA 324
P+ N ++ V KL V AL ++E + + F++ L C + + D
Sbjct: 141 PNTRAMNMMMDVNFKLNVVNGALEIFEGIRF----RNFFSFDIALSHFCSRGGRGDLVGV 196
Query: 325 TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHG 384
+ +M GF P + +L + + VSEA Q+ M G+ S +++L+ G
Sbjct: 197 KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSG 256
Query: 385 LIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD 444
++G P+ A LF + + G +
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGC-----------------------------------SPN 281
Query: 445 LVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDYSPM 504
LVT TSL+ G G D ++ V+ L P ++ +
Sbjct: 282 LVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT--------------- 326
Query: 505 FPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYASQLF 564
+ G F E + T + L D+++ + + L S F
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVP----------DQYTFASILSSLC--------LSGKF 368
Query: 565 TPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIM 624
P R+ FD+ N + F G S A K+ I + YTY +
Sbjct: 369 DLVP--RITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYL 426
Query: 625 SSFVKKGYFNEA---WAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ 681
S+ + G A + II + + L D ++ II L ++G+ + A + R + +
Sbjct: 427 SALCRGGAPRAAIKMYKIIIKEKKHL---DAHFHSAIIDSLIELGKYNTAVHLFKRCILE 483
Query: 682 GGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDA 741
LD+V Y I L +A RI+E MK GI P+ TY T+I K +
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 742 YKFLKMMLDAG 752
K L+ + G
Sbjct: 544 RKILRECIQEG 554
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 127/322 (39%), Gaps = 30/322 (9%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMP----GPDLCTYNCLISVLCKLGKVKDALIVWEDLN 297
Y I F G + +F++ ++ PD+ N +I +LG+ ++A V+ L
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE 344
Query: 298 ACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVS 357
PD +T+ +++ C + K D RI H G + N L + K S
Sbjct: 345 KRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLSNCFSKIGYNS 401
Query: 358 EACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
A ++ M+ + C TY + + L + G P AA ++ + K+ + +D +S I+
Sbjct: 402 YALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAII 461
Query: 418 LQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLV 477
+ +D+V+ T + G+ + R + L ++EG +
Sbjct: 462 DSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIY 521
Query: 478 P----------------------KVLRWKAGMEASIKNPPSKKKDYSPMFPSKGDFSEIM 515
P K+LR + E +P +K + YS + +GDFSE
Sbjct: 522 PNRRTYRTIISGLCKEKETEKVRKILR-ECIQEGVELDPNTKFQVYSLLSRYRGDFSEFR 580
Query: 516 SILTGSQDANLDSHDTKIEDEE 537
S+ + ++ D D+E
Sbjct: 581 SVFEKWKSEFTENVDVSDSDDE 602
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G P + I+ + G +EA+ ++ M + ++M++ G + G A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+ +++++ G ++V Y +LI G +DE +++S G+ PD+V N +I
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+++ G ++A K + P+ T
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 3/241 (1%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDA 289
M GF +T N+ + + + +F + + +++ +S C G D
Sbjct: 134 MSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDL 193
Query: 290 L---IVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSL 346
+ IV + + P+ + +++ CC+T + A ++ M +G V++ L
Sbjct: 194 VGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSML 253
Query: 347 LDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQ 406
+ F++ + +A LF KM Q G + TY LI G + G + A+T+ ++ +G
Sbjct: 254 VSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL 313
Query: 407 FVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDR 466
D + ++++ R V D T S++ + G++D R
Sbjct: 314 APDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPR 373
Query: 467 L 467
+
Sbjct: 374 I 374
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 35/238 (14%)
Query: 558 GYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS 617
G + FT +VQ +G DI + N + + G+ A K+F + + P
Sbjct: 296 GMVDEAFTVL--SKVQSEGLAP-DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 352
Query: 618 YTYNSIMSS--------------------------------FVKKGYFNEAWAIITEMGE 645
YT+ SI+SS F K GY + A +++ M
Sbjct: 353 YTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSY 412
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDE 705
K D TY + + L + G A + ++K+ +LD ++ +I++L + G+ +
Sbjct: 413 KDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNT 472
Query: 706 VNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
F++ DVV+Y I+ +A +++AY M + G PN T T+
Sbjct: 473 AVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTI 530
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 572 VQQKGSDSFDIDMVNTFLSIFL--AKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVK 629
V ++G D + + NT L + +G +++A K+F+ VD +YNSIMS + +
Sbjct: 209 VIKRGFDR-GVSVGNTLLDAYAKGGEGGVAVARKIFDQI----VDKDRVSYNSIMSVYAQ 263
Query: 630 KGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIV 688
G NEA+ + + K+ + T + ++ + G + I D++++ G D++
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 689 MYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ ++I+ K GR++ K F++MK N +V ++ +I + G A + M
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMK----NKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 749 LDAGCTPNHVT 759
+D+G PN++T
Sbjct: 380 IDSGVRPNYIT 390
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 200/504 (39%), Gaps = 43/504 (8%)
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
G +A++ +F MP D +N +++ +LG ++A+ ++ L +PD +++T ++
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK 372
C + +I + + +GF V NSL+D+ K + A ++F M +
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXX 432
T+ L+ + + EAA +F ++ K+ F ++I++
Sbjct: 138 E--VTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFA----WNIMISGHAHCGKLESCLSL 191
Query: 433 XXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIK 492
F D T +SLM +V G +V V+ K G ++++
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACSADS---------SNVVYGRMVHAVML-KNGWSSAVE 241
Query: 493 NPPSKKKDYSPMFPSKGDFSEIMSILTGSQ---DANLDSHDTKIEDEEGDE-WSLSPHMD 548
S Y+ + E+ SI +Q ++ +D+ E E+ E + L+P +
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 549 KLANQVKSSGY--------ASQLFTPTPGQRVQQKGSDSFDIDMVNTFLS--IFLAKGKL 598
+ +GY A + F V SD F V S L GK+
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD---SDHFAYGAVLHACSGLALLGHGKM 358
Query: 599 SLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMI 658
C G +Y N++++ + K G EA ++ K D+ ++N +
Sbjct: 359 IHGC-----LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK----DLVSWNTM 409
Query: 659 IQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-KSSG 717
+ G G AD A + D ++ G D V + L+ +G ++E FE M K
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYR 469
Query: 718 INPDVVTYNTLIEVHSKAGLLKDA 741
I +V +I++ + G L +A
Sbjct: 470 IPLEVDHVTCMIDMFGRGGHLAEA 493
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N+ + + G+ A ++F + E + T+ ++++ + + G +A EM +
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNI----VTWTTMITGYGRNGDGEQALRFFVEMMK 330
Query: 646 KLCPADIATYNMIIQ--------GLGKI-----------GRADLASAIL----------- 675
+D Y ++ G GK+ G A + +A++
Sbjct: 331 SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKE 390
Query: 676 -DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
DR D+V +NT++ A G G D+ K ++ M +SGI PD VT+ L+ S
Sbjct: 391 ADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSH 450
Query: 735 AGLLKDAYKFLKMMLDAGCTP---NHVTDTTLDYLGR 768
+GL+++ + M+ P +HVT +D GR
Sbjct: 451 SGLVEEGCMIFESMVKDYRIPLEVDHVT-CMIDMFGR 486
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 601 ACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEA-W--AIITEMGEKLCPADIATYNM 657
A +LF+ G P ++Y S+ + G+ + W A + + GEKL N
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF---AGNT 302
Query: 658 IIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSG 717
++ K G A I DRL K+ D+V +N+L+ A + G E +FE+M+ G
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 718 INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN--HVTDTTLDYLGREID 771
I P+ +++ +++ S +GLL + + + ++M G P H T +D LGR D
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV-TVVDLLGRAGD 413
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 592 FLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPAD 651
FL +GK A ++G V++ N+++ + K G ++A I ++L D
Sbjct: 277 FLEQGKWVHA-----YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF----DRLAKRD 327
Query: 652 IATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFE 711
+ ++N ++ + G A + + + G + + + +++ A +G +DE ++E
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 712 QMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
MK GI P+ Y T++++ +AG L A +F++ M
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
LE + H M K G L + N + + G + + +F ++ D+ ++N L++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
+ G K+A+ +E++ +P+ ++ +++ C + +D + M +G P
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKA 373
Y +++D+L +A ++ A + E+M E A
Sbjct: 398 AWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 241 GYNICIHAFGCWGDLATSFSL-------FHQMPGPDLCTYNCLISVLCKLGKVKDALIVW 293
G++ +H DL T + L F + + ++N LI+ + + AL ++
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKA 353
+ + +P HF+Y +L C T ++ + M +G + N+LLD+ K+
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 354 TKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITY 413
+ +A ++F+++A+ V ++N L+ ++G + A F ++++ G + I++
Sbjct: 311 GSIHDARKIFDRLAKRDV----VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 414 SIIVLQXXXXXXXXXXXXXXXXXXXRGFVVD---LVTITSLMVGIHKHGRWDWTDRLMKH 470
++ G V + VT+ L+ GR +R ++
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL------GRAGDLNRALRF 420
Query: 471 VREGDLVPKVLRWKAGMEA 489
+ E + P WKA + A
Sbjct: 421 IEEMPIEPTAAIWKALLNA 439
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 649 PADIATYNMIIQGL--------GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
PAD YN +++ G+I A + +I DIVM NTL+N K
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRH--------DIVMGNTLLNMYAKC 108
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G ++E K FE+M D VT+ TLI +S+ DA F ML G +PN T
Sbjct: 109 GSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
++G S +N+++++F + G +A + +M E +TYN +I+G G G+ +
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 670 LASAILDRLLKQGGY---LDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYN 726
+S +LD +L++G +I +N L+ A K +++E + ++M+ G+ PD VTYN
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 727 TLIEVHSKAG--LLKDAYKFLKMMLDAGCTPNHVTDTTL--DYL--GREIDKLRY 775
T+ + + G + ++ KM++ PN T + Y GR D LR+
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 575 KGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFN 634
+GS + +++ + +G+ A +F+ E G P +Y +++++ + +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 635 EAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLI 694
+I++E+ + D +N +I + G + A L ++ + G YNTLI
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 695 NALGKAGRIDEVNKFFEQMKSSG---INPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDA 751
G AG+ + ++ + M G + P++ T+N L++ K +++A++ +K M +
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 752 GCTPNHVTDTTL 763
G P+ VT T+
Sbjct: 218 GVRPDTVTYNTI 229
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
+I N + + K K+ A ++ + E GV P + TYN+I + +V+KG A + +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 641 TE---MGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINA- 696
E M EK P + T +++ G + GR + R+ + ++V++N+LIN
Sbjct: 247 VEKMVMKEKAKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 697 ---LGKAGRIDEVN------KFFEQ----------------MKSSGINPDVVTYNTLIEV 731
+ + G IDEV F E+ MK + DV+TY+T++
Sbjct: 306 VEVMDRDG-IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNA 364
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPN 756
S AG ++ A + K M+ AG P+
Sbjct: 365 WSSAGYMEKAAQVFKEMVKAGVKPD 389
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 276 LISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG 335
L++VL + G+ +A V++ L H+P +YTTL+ + + I +++ +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAY 395
+ +I +N++++ ++ + +A Q KM + G+ + TYN LI G G+PE +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 396 TLF 398
L
Sbjct: 171 ELL 173
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
G + ++ + E V TY+++M+++ GY +A + EM + D Y
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
+++ +G + A +L+ L+ + ++V++ T+I+ G +D+ + F +M
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G++P++ T+ TL+ + + A + L+MM G P + T
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 496
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 18/218 (8%)
Query: 196 DSNSNSNSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDL 255
S + +SI FN ++ A ++ + Q K M + G T YN I +G G
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 256 ATSFSLFHQM-------PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTY 308
S L M GP++ T+N L+ CK KV++A V + + C +PD TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 309 TTLIQGCCKTYK---IDHATRIFNQM-HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFE 364
T+ C K + + + +M +P ++ + +V + +
Sbjct: 227 NTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 365 KMAQEGVKASCQTYNILIHGLI----KNGRPEAAYTLF 398
+M + V+A+ +N LI+G + ++G E TL
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL 322
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 585 VNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVS--------------YTYNSIMSSFVKK 630
V+ + +L + L ++ KL ++ G V+ + +NS++S + +
Sbjct: 114 VHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAEL 173
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
G + +A A+ +M E D T+ +++ G IG + AI L+K+G D+ +
Sbjct: 174 GQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL 233
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLD 750
N L+ K G I + F+ + + D V++N+++ + GLL +A ++M+
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIP----HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ 289
Query: 751 AGCTPNHVTDTTL 763
G P+ V +++
Sbjct: 290 NGIEPDKVAISSV 302
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFV--KKGYFNEAWAIITEM 643
N+ L+ +L G L A +F + + G++P +S+++ + K G W I M
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGM 324
Query: 644 GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRI 703
+L A N +I K G+ A I D++L++ D V +N +I+A K
Sbjct: 325 EWELSVA-----NALIVLYSKRGQLGQACFIFDQMLER----DTVSWNAIISAHSKN--- 372
Query: 704 DEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
K+FEQM + PD +T+ +++ + + G+++D + +M
Sbjct: 373 SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 220 LEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISV 279
++ + H+ + K+GF D + N + + GD+ + ++F +P D ++N +++
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 280 LCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPG 339
G + +AL ++ + +PD ++++ + H ++ + G
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWE 327
Query: 340 TIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFC 399
V N+L+ + K ++ +AC +F++M ++ ++N +I KN F
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHSKNSN---GLKYFE 380
Query: 400 DLKKKGQFVDGITY 413
+ + DGIT+
Sbjct: 381 QMHRANAKPDGITF 394
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 553 QVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTE 610
Q K A +LF PG+ DMV+ + F KG++S +LF + E
Sbjct: 353 QRKQISEAYELFEKMPGK------------DMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 611 AGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK-LCPADIATYNMIIQGLGKIGRAD 669
D +++T +++S+FV GY+ EA +M +K +CP + T++ ++ + AD
Sbjct: 401 K--DNITWT--AMISAFVSNGYYEEALCWFHKMLQKEVCP-NSYTFSSVLSATASL--AD 453
Query: 670 LASA--ILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNT 727
L I R++K D+ + N+L++ K G ++ K F + P++V+YNT
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNT 509
Query: 728 LIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+I +S G K A K M+ +G PN VT
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 108/250 (43%), Gaps = 11/250 (4%)
Query: 166 NHIPLAFSIFL--KLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQ 223
+ +PL F +FL L+ ++ A N +S+++N L+ L + E
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 224 QVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKL 283
++F K+ K D + I F G+++ LF MP D T+ +IS
Sbjct: 362 ELFEKMPGK-----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVY 343
G ++AL + + P+ +T+++++ + +I ++ V
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ 476
Query: 344 NSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKK 403
NSL+ + K ++A ++F +++ + +YN +I G NG + A LF L+
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISEPNI----VSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 404 KGQFVDGITY 413
G+ +G+T+
Sbjct: 533 SGKEPNGVTF 542
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
NS++S + K G N+A+ I + + E +I +YN +I G G A + L
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIEVHSKAGLLK 739
G + V + L++A G +D K+F+ MKSS I P Y ++++ ++GLL
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 740 DAYKFLKMM 748
DA + M
Sbjct: 593 DASNLISTM 601
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G++P TYN ++ F + G + +++I+ EM K + +++ ++I G ++D
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEV 731
+L + +G + + YN I +L K + E + M S+G+ P+ VTY+ LI
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 732 HSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDY 765
++A K K+M++ GC P+ TL Y
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY 335
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 7/232 (3%)
Query: 249 FGCW--GDLATSFSLFHQMPG-----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
F C D + ++ +MP PDL TYN +I V C+ G + + ++
Sbjct: 159 FACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGI 218
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+P+ ++ +I G K D ++ M + G G YN + L K K EA
Sbjct: 219 KPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKA 278
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
L + M G+K + TY+ LIHG E A LF + +G D Y ++
Sbjct: 279 LLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC 338
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVRE 473
+ +V + SL+ G+ K + + L+ V+E
Sbjct: 339 KGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D++ N + +F G S + + G+ P S ++ ++S F + +E ++
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M ++ ++TYN+ IQ L K ++ A A+LD +L G + V Y+ LI+
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPN 756
+E K F+ M + G PD Y TLI K G + A K ++ P+
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 272 TYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQM 331
TYN I LCK K K+A + + + + +P+ TY+ LI G C + A ++F M
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 332 HNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRP 391
N G +P + Y +L+ L K A L ++ ++ S L++GL K+ +
Sbjct: 319 VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKV 378
Query: 392 EAAYTLFCDLKKK 404
E A L +K+K
Sbjct: 379 EEAKELIGQVKEK 391
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 7/237 (2%)
Query: 243 NICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL-NACAH 301
N+ H+ + DL F + + + + CL++ K+A V+ ++
Sbjct: 130 NMLDHSLRVFRDL-EKFEISRTVKSLNALLFACLVA-----KDYKEAKRVYIEMPKMYGI 183
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+PD TY +I+ C++ + I +M G +P + + ++ + K E +
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXX 421
+ M GV TYNI I L K + + A L + G + +TYS ++
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 422 XXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVP 478
RG D +L+ + K G ++ L K E + VP
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
+N I + G + + LF +MP ++ ++N ++ L + G++ +A+ ++E +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----P 198
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+ D ++T ++ G K K+D A R+F+ M I +N+++ + ++ EA Q
Sbjct: 199 RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQ 254
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK 404
LF+ M + ++N +I G I+N A LF + +K
Sbjct: 255 LFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEK 293
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 242 YNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH 301
+N + A G + + +LF +MP D+ ++ ++ L K GKV +A +++ C
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD----CMP 229
Query: 302 QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQ 361
+ + ++ +I G + +ID A ++F M F +N+++ + ++++AC
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACG 285
Query: 362 LFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
LF++M ++ V ++ +I G ++N E A +F + + G
Sbjct: 286 LFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 587 TFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEK 646
+S +L +LS+A LF+ E V ++N+++ + + G ++A + EM E+
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 647 LCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEV 706
+I ++N +++ L + GR D A + +R+ ++ D+V + +++ L K G++DE
Sbjct: 170 ----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEA 221
Query: 707 NKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
+ F+ M I +++N +I +++ + +A + ++M
Sbjct: 222 RRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 213 LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCT 272
++ DM+ E +++F ++ +K TW + + L+ + LF +MP ++ +
Sbjct: 88 IKLGDMR-EARELFDRVDSRKNVV--TW--TAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH 332
+N +I + G++ AL +++++ + + ++ ++++ + +ID A +F +M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 333 NNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE 392
R + + +++D L K KV EA +LF+ M + + ++N +I G +N R +
Sbjct: 199 ----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRID 250
Query: 393 AAYTLF 398
A LF
Sbjct: 251 EADQLF 256
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 596 GKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATY 655
GK++ A KLF+ E D V++T+ +++ ++K G EA + + + ++ T+
Sbjct: 60 GKIAEARKLFDGLPER--DVVTWTH--VITGYIKLGDMREARELFDRVDSR---KNVVTW 112
Query: 656 NMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 715
++ G + + +A + + ++ ++V +NT+I+ ++GRID+ + F++M
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 716 SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 748
I V++N++++ + G + +A + M
Sbjct: 169 RNI----VSWNSMVKALVQRGRIDEAMNLFERM 197
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 116/571 (20%), Positives = 223/571 (39%), Gaps = 66/571 (11%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFH--QMPGPDLCTYNCLISVLCKL 283
H L+ K G+ + N + + DL+ + LF Q G D +N ++S
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG-DAVLWNSILSSYSTS 262
Query: 284 GKVKDALIVWEDLNACAHQPDHFTYTTLIQGC-----CKTYKIDHATRIFNQMHNNGFRP 338
GK + L ++ +++ P+ +T + + C K K HA+ + + H++
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL-- 320
Query: 339 GTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLF 398
V N+L+ + + K+ +A ++ +M A T+N LI G ++N + A F
Sbjct: 321 --YVCNALIAMYTRCGKMPQAERILRQMNN----ADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 399 CDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGFVVDLVTITSLMVGIHKH 458
D+ G D ++ + I+ G+ +L +L+ K
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 459 GRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKK--KDYSPMFPSKGDFSEIM- 515
+ R + + DL+ W + +N + + + + + + E++
Sbjct: 435 NLTCYMGRAFLRMHDKDLIS----WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 516 -SILTGSQD-------ANLDSH-------DTKIEDEEGDEWSLSPHMDKLANQVKSSGYA 560
SIL S + H DT I++E D + + ++ GYA
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVY----------GKCRNMGYA 540
Query: 561 SQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTY 620
+++F G+ D+ + +S G S A +LF E G+ S
Sbjct: 541 TRVFESIKGK----------DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 621 NSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK 680
I+S+ N+ I + K + + ++ G A A+ DR+ +
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Query: 681 QGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
+G ++ Y ++INA G G + F++M+ ++PD +++ L+ S AGLL +
Sbjct: 651 KG----LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 741 AYKFLKMM---LDAGCTPNHVTDTTLDYLGR 768
FLK+M + P H +D LGR
Sbjct: 707 GRGFLKIMEHEYELEPWPEHYV-CLVDMLGR 736
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 217 DMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCL 276
D L + H L+ K+ F+ +T+ N I+ + GDL S ++F +MP + ++N +
Sbjct: 370 DNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSM 429
Query: 277 ISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHN-NG 335
I+ + G AL ++E++ +P T+ +L+ C ID + N+M +G
Sbjct: 430 IAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHG 489
Query: 336 FRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPE--- 392
P T Y ++D+L +A + EA + + +K C+ + L+ +G E
Sbjct: 490 IEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLP---LKPDCKIWQALLGACSFHGDTEVGE 546
Query: 393 -AAYTLF 398
AA LF
Sbjct: 547 YAAEQLF 553
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G+ ++ N+++ +VK G+ A I +M K + T+N++I G G G A
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK----SLITWNLMIYGYGSHGDCITA 662
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVVTYNTLIE 730
++ D + K G D V + +LI+A +G ++E FE MK GI P++ Y +++
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVD 722
Query: 731 VHSKAGLLKDAYKFLKMM 748
+ +AGLL++AY F+K M
Sbjct: 723 LLGRAGLLEEAYSFIKAM 740
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 258 SFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDL--NACAHQPDHFTYTTLIQGC 315
++ +F M D+ + LIS LCK GK K+AL V+ D+ + + +PD T++ C
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
+ ++ M G V +SL+D+ K A ++F M+ E + A
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-- 544
Query: 376 QTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVL 418
+N +I +N PE + LF + +G F D ++ + +++
Sbjct: 545 --WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 557 SGYASQLFTPTPGQRV-QQKGSDSFDIDMVN--TFLSIFLAKGKLSLACKLFEIFTEAGV 613
+G+ + + +P +RV + G+ D+V+ + +S + G L+ KLF+ + +
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 614 DPVSYTYNSIMSSFVKKGYFNEAWAIITEM-GEKLCPADIATYNMIIQGLGKIGRADLAS 672
+P YN+++ + K + +EA ++ M EK ++ TYN +I+ L K + + A
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 673 AILDRLLKQGGYLDIVMYNT--------------------------------LINALGKA 700
+ D +L++G + I Y+ LI L +
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNH 757
D V +++MK + PD+ +Y +I G +++AY + K M D G PN
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 230 MDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGK 285
M G D Y+ I + G L LF +M PD YN ++ L K
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 286 VKDALIVWEDLNACAH-QPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYN 344
V +A + + + +P+ TY +LI+ CK K + A ++F++M G P Y+
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 345 SLLDVLFKATKVSE--------ACQ------------------------LFEKMAQEGVK 372
+ + +L +V E C+ L+++M ++ V
Sbjct: 413 AFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 472
Query: 373 ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKG 405
+Y ++IHGL NG+ E AY + ++K KG
Sbjct: 473 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 269 DLCTYNCLISVLCK-LGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
D ++N +++ C +G ++A VW ++ + D +Y+++I K ++ ++
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQE-GVKASCQTYNILIHGLI 386
F++M P VYN+++ L KA+ VSEA L + M +E G++ + TYN LI L
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 387 KNGRPEAAYTLFCDLKKKGQFVDGITY 413
K + E A +F ++ +KG F TY
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTY 411
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQG-LGKIGRA 668
E G+D + S++S+ + ++A +I +K P D ++N+++ G IG
Sbjct: 229 EMGID----DFQSLLSALCRYKNVSDAGHLIFCNKDKY-PFDAKSFNIVLNGWCNVIGSP 283
Query: 669 DLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 728
A + + G D+V Y+++I+ K G +++V K F++MK I PD YN +
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 729 IEVHSKAGLLKDAYKFLKMMLDA-GCTPNHVTDTTL 763
+ +KA + +A +K M + G PN VT +L
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSL 379
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGF-ALDTWGYNICIHAFGCWGDLATSFS 260
N + +N L+ L KA E +QVF ++++K F + T+ + I G F
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG-----EEVFE 426
Query: 261 LFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
L +M P + TY LI LC+ + L++W+++ PD +Y +I G
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF 486
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIV 342
KI+ A + +M + G RP V
Sbjct: 487 LNGKIEEAYGYYKEMKDKGMRPNENV 512
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P +TY++++ + V F+ ++ EM E+L + T N+++ G G++GR D +
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 675 L-DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHS 733
L D L+ D+ N +++ G G+ID + ++E+ ++ GI P+ T+N LI +
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 734 K 734
K
Sbjct: 313 K 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +N LS+F GK+ + +E F G++P + T+N ++ S+ KK +++ +++
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM 324
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKA 700
M + P +TYN II+ +G A D++ +G D + LIN A
Sbjct: 325 EYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 384
Query: 701 GRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
G +V + I + YN +I +KA L + + M + C + T
Sbjct: 385 GLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRT 443
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 25/254 (9%)
Query: 144 HLLQPGCTPLI--YNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNS 201
+L+ G P + Y +LL A R+N I AFSI K+
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF---------------PQCQP 193
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSL 261
+ ++ LL A A + + +K MD++ +T NI + +G G +
Sbjct: 194 DVFTYSTLLKACVDAS-QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 262 FHQM-----PGPDLCTYNCLISVLCKLGKVKDALIVW-EDLNACAHQPDHFTYTTLIQGC 315
M PD+ T N ++SV +GK+ D + W E +P+ T+ LI
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKI-DMMESWYEKFRNFGIEPETRTFNILIGSY 311
Query: 316 CKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASC 375
K D + + M F T YN++++ F++M EG+KA
Sbjct: 312 GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADT 371
Query: 376 QTYNILIHGLIKNG 389
+T+ LI+G G
Sbjct: 372 KTFCCLINGYANAG 385
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 581 DIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAII 640
D+ +T L + + L L++ E + P + T N ++S + + G F++ ++
Sbjct: 194 DVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVL 253
Query: 641 TEM-GEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGK 699
++M C D+ T N+I+ G +G+ D+ + ++ G + +N LI + GK
Sbjct: 254 SDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGK 313
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKD 740
D+++ E M+ TYN +IE + G K+
Sbjct: 314 KRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKN 354
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 582 IDMVNTFLSIFLAKGKLSLACKLFEIFTEAGV-DPVSYTYNSIMSSFVKKGYFNEAWAII 640
++ V LS +AK + A ++F++ E P TY ++ K G N A +
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 641 TEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLK-QGGYLDIVMYNTLINALGK 699
EM E+ + Y ++ + D A +ILD++ D+ Y+TL+ A
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 700 AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK-MMLDAGCTPN 756
A + D V+ +++M I P+ VT N ++ + + G K L M++ C P+
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPD 265
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 653 ATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQ 712
TY ++ LGK G+ + A + D +L++G + +Y L+ A ++ ID+ ++
Sbjct: 125 GTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDK 184
Query: 713 MKS-SGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
MKS PDV TY+TL++ A K M + TPN VT
Sbjct: 185 MKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVT 232
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 615 PVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAI 674
P +Y ++ S+ G +A I+ +M K + I+ L K G ++A +
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 675 LDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSK 734
+ ++K+G LD YN I + K + V + E+M S G+ PD ++YN L+ + +
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 735 AGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
G+L +A K + + C PN T TL
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 612 GVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLA 671
G++ + + +I+SS KKG A + EM +K C D A YN+ I K +
Sbjct: 204 GMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES-PERV 262
Query: 672 SAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLI 729
+++ + G D + YN L+ A + G +DE K +E ++ + P+ T+ TLI
Sbjct: 263 KELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 303 PDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQL 362
PD +Y LI+ C + + A I QM G TI + ++L L+K ++ A L
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 363 FEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ +M ++G + YN+ I K PE L ++ G D I+Y+ ++
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLM 285
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 308 YTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMA 367
Y+TLI+ + +HA R F QM G + +N+LL+ + + QLF+++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 368 QEGVK--ASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
Q K +Y ILI +G PE A + ++ KG V I ++ I+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTIL 216
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL-DTWGYNICIHAFGCWGDLATSFS 260
++++FN LL A + + Q+F ++ + + D Y I I ++ G +
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 261 LFHQMPGPDL----CTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCC 316
+ QM G + + ++S L K G+++ A +W ++ + D+ Y I
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQ 255
Query: 317 KTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ 376
K + + +M + G +P TI YN L+ + + EA +++E + +
Sbjct: 256 KE-SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAA 314
Query: 377 TYNILIHGLIKNGRPEAAYTLF 398
T+ LI L + E Y +F
Sbjct: 315 TFRTLIFHLCYSRLYEQGYAIF 336
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 131/627 (20%), Positives = 251/627 (40%), Gaps = 80/627 (12%)
Query: 146 LQPGCTPLIYNSLLIASLRNNHIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIA 205
+ P ++NS++ A +N P A + KL E S + +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE----------------SKVSPDKYT 108
Query: 206 FNQLLVA---LRKADMKLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLF 262
F ++ A L A+M V+ +++D GF D + N + + G L + +F
Sbjct: 109 FPSVIKACAGLFDAEMG---DLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 263 HQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKID 322
+MP DL ++N LIS G ++AL ++ +L PD FT ++++ +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 323 HATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILI 382
+ +G +V N L+ + K + ++A ++F++M V+ S +YN +I
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM---DVRDSV-SYNTMI 280
Query: 383 HGLIKNGRPEAAYTLFCDLKKKGQFV-DGITYSIIVLQXXXXXXXXXXXXXXXXXXXRGF 441
G +K E + +F L+ QF D +T S ++ GF
Sbjct: 281 CGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 442 VVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEASIKNPPSKKKDY 501
V++ T+ ++++ ++ T R + + E + W + + I++
Sbjct: 339 VLE-STVRNILIDVYAKCGDMITARDVFNSME---CKDTVSWNSIISGYIQS-------- 386
Query: 502 SPMFPSKGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKLANQVKSSGYAS 561
GD E M + I +E+ D H+ L S+ A
Sbjct: 387 -------GDLMEAMKLFKMMM----------IMEEQAD------HITYLMLISVSTRLAD 423
Query: 562 QLFTPTPGQRVQQKGSDS---FDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSY 618
F G+ + G S D+ + N + ++ G++ + K IF+ G +
Sbjct: 424 LKF----GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK---IFSSMGTGD-TV 475
Query: 619 TYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRL 678
T+N+++S+ V+ G F + T+M + D+AT+ + + + L I L
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 679 LKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLL 738
L+ G ++ + N LI K G ++ ++ FE+M DVVT+ +I + G
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS----RRDVVTWTGMIYAYGMYGEG 591
Query: 739 KDAYKFLKMMLDAGCTPNHVTDTTLDY 765
+ A + M +G P+ V + Y
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIY 618
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 256 ATSFSLFHQM-PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQG 314
A+S S+F ++ P ++ +N +I K G +AL + L PD +T+ ++I+
Sbjct: 56 ASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA 115
Query: 315 CCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKAS 374
C + + ++ Q+ + GF V N+L+D+ + ++ A Q+F++M +
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL--- 172
Query: 375 CQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
++N LI G +G E A ++ +LK D T S ++
Sbjct: 173 -VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 606 EIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKI 665
+F E V S +YN+++ ++K E+ + E ++ P D+ T + +++ G +
Sbjct: 263 RVFDEMDVRD-SVSYNTMICGYLKLEMVEESVRMFLENLDQFKP-DLLTVSSVLRACGHL 320
Query: 666 GRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
LA I + +LK G L+ + N LI+ K G + F M+ D V++
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK----DTVSW 376
Query: 726 NTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRYQKA 778
N++I + ++G L +A K KMM+ +H+T L + + L++ K
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 211 VALRKADMKLEFQQ--VFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGP 268
V L++ + E+ + H M GFAL+ + + + GDL T+ LF +
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR 172
Query: 269 DLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIF 328
DL +N +IS + G ++ L ++ D+ PD +T+ ++ + C +++H R
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 232
Query: 329 NQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKN 388
M + IV ++L+D+ FK + S+ ++F++++ V T+ LI G +
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV----ITWTSLISGYGYH 288
Query: 389 GRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
G+ F +K++G + +T+ +++
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVL 317
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 37/214 (17%)
Query: 588 FLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL 647
L ++ G L A LF + P +N+++S +V+KG E I +M +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIP----WNAMISGYVQKGLEQEGLFIYYDMRQNR 204
Query: 648 CPADIATYNMIIQGLGKIGRAD-------------------LASAILD------------ 676
D T+ + + + R + + SA++D
Sbjct: 205 IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGH 264
Query: 677 RLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAG 736
R+ Q +++ + +LI+ G G++ EV K FE+MK G P+ VT+ ++ + G
Sbjct: 265 RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 737 LLKDAYK-FLKMMLDAGCTP-NHVTDTTLDYLGR 768
L+ ++ F M D G P +D LGR
Sbjct: 325 LVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 604 LFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKL-CPADIATYNMIIQGL 662
LF ++G++P + N ++ +V + N+A I +M C + TY+ +I GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 663 GKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDV 722
GR A +L + +G + YN+L+NA +G ID+ K +M +G D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 723 VTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREI 770
++Y TL++ + G +A + L+M+ + D ++ L +++
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKDL 442
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 202 NSIAFNQLLVALRKADMKLEFQQVFHKLMDKKGFAL--DTWGYNICIHAFGCWGD----- 254
N +N ++ KA + +F ++ K Y+I A G+
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 255 ---LATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAH-QPDHF 306
+ T SLF QM PD+ NCL+ V DAL ++ ++ +P+ F
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 307 TYTTLIQGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKM 366
TY LI G C + +A + ++M GF P YNSL++ + ++ +A + +M
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 367 AQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ G +Y L+ + G+ + A L L++K Q VD +Y +V
Sbjct: 386 IENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK-QLVDRDSYDKLV 435
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 18/222 (8%)
Query: 273 YNCLISVLCKLGKVKDALIVWEDLNACAH---QPDHFTYTTLIQ---GCCKTYKIDHA-- 324
YN +I K GK+ A+ ++ + + +P TY L + G I+H
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 325 ---TRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQ----T 377
+F QM ++G P N L+ + V++A ++F +M+ V C+ T
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS---VVYDCEPNSFT 326
Query: 378 YNILIHGLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIVLQXXXXXXXXXXXXXXXXXX 437
Y+ LIHGL GR A L ++K KG +G +Y+ +V
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 438 XRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPK 479
G VVD ++ +L+ + G++D RL++ +RE LV +
Sbjct: 387 ENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 115/565 (20%), Positives = 214/565 (37%), Gaps = 86/565 (15%)
Query: 195 LDSNSNSNSIAFNQLLVALRKADM--KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCW 252
LD N +S ++ A M L + H +KG L+++ N + +G
Sbjct: 191 LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKL 249
Query: 253 GDLATSFSLFHQMPGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLI 312
G LA+S L G DL T+N ++S LC+ ++ +AL ++ +PD FT ++++
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 313 QGCCKTYKIDHATRIFNQMHNNGFRPGTIVYNS-----LLDVLFKATKVSEACQLFEKMA 367
C + R ++H + G++ NS L+D+ +V ++F+ M
Sbjct: 310 PACSHLEML----RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 368 QEGVKASCQTYNILIHGLIKNGRPEAAYTLFCDLKKK-GQFVDGITYSIIVLQXXXXXXX 426
+ +N +I G +N + A LF +++ G + T + +V
Sbjct: 366 DRKIG----LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 427 XXXXXXXXXXXXRGFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAG 486
RG D +LM + G+ D R+ + + DLV W
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT----WNTM 477
Query: 487 MEASIKNPPSKKKDYSPMFPSKGDFSEIM--SILTGSQDANLDSHDTKIEDEEGDEWSLS 544
+ + FSE ++L + NL+ +K SL
Sbjct: 478 ITGYV-------------------FSEHHEDALLLLHKMQNLERKVSK----GASRVSLK 514
Query: 545 PHMDKLANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKL 604
P+ L + S S L K + + D+ + + + ++ G L ++ K+
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 605 FEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGK 664
F+ + V T+N I+ ++ G EA
Sbjct: 575 FDQIPQKNV----ITWNVIIMAYGMHGNGQEA---------------------------- 602
Query: 665 IGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSS-GINPDVV 723
DL L ++ QG + V + ++ A +G +DE + F MK G+ P
Sbjct: 603 ---IDL----LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMM 748
Y ++++ +AG +K+AY+ + MM
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMM 680
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 226 FHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPGPDLCTYNCLISVLCKLGK 285
H K A D + + + G L S +F Q+P ++ T+N +I G
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 286 VKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMH-NNGFRPGTIVYN 344
++A+ + + +P+ T+ ++ C + +D RIF M + G P + Y
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 345 SLLDVLFKATKVSEACQLFEKMAQEGVKA 373
++D+L +A ++ EA QL M ++ KA
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 238 DTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYNCLISVLCKLGKVKDALIVW 293
DT YN+ I F GDL + L +M PD+ TY +I+ C GK+ DA +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 294 EDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNNG----FRPGTIVYNSLLDV 349
++++ + TY+ +++G CK+ ++ A + +M P + Y ++
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 350 LFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAAYTLFCD 400
+ +V EA + ++M G + T +LI G+++N A + D
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID 334
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 586 NTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGE 645
N + +F KG L++A L + G+ P TY S+++ + G ++AW + EM +
Sbjct: 169 NLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSK 228
Query: 646 KLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQ-GGYL---DIVMYNTLINALGKAG 701
C + TY+ I++G+ K G + A +L + K+ GG L + V Y +I A +
Sbjct: 229 HDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKR 288
Query: 702 RIDEVNKFFEQMKSSGINPDVVTYNTLIE 730
R++E ++M + G P+ VT LI+
Sbjct: 289 RVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 608 FTEAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGR 667
F E V + YN ++ F KG N A +I EM D+ TY +I G G+
Sbjct: 156 FPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGK 215
Query: 668 ADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQM-KSSG---INPDVV 723
D A + + K L+ V Y+ ++ + K+G ++ + +M K G I+P+ V
Sbjct: 216 IDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAV 275
Query: 724 TYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTL 763
TY +I+ + +++A L M + GC PN VT L
Sbjct: 276 TYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVL 315
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 268 PDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRI 327
D YN +I + G + A ++ ++++ PD TYT++I G C KID A R+
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 328 FNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEG----VKASCQTYNILIH 383
+M + ++ Y+ +L+ + K+ + A +L +M +E + + TY ++I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSIIV 417
+ R E A + + +G + +T +++
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 639 IITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALG 698
+I ++ C ++ T +++ + AD A +L + + D V YN +I
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 699 KAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHV 758
G ++ + ++M G+ PDV+TY ++I + AG + DA++ K M C N V
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 759 T 759
T
Sbjct: 237 T 237
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
+EA ++ + E AD YN++I+ G ++A ++ + G Y D++ Y ++
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 694 INALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM--LDA 751
IN AG+ID+ + ++M + VTY+ ++E K+G ++ A + L M D
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 752 G--CTPNHVTDT 761
G +PN VT T
Sbjct: 267 GGLISPNAVTYT 278
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 142/364 (39%), Gaps = 36/364 (9%)
Query: 48 ILQILSNPTLHPSHKLHFFNW-CRSHHSSPLSPSAYSLILRSLSRPAFXXXXXXXXXSIK 106
+++ N T P L FF+W C+S SS L ++ +LR L+ ++
Sbjct: 73 VIESCKNET-SPRRLLRFFSWSCKSLGSS-LHDKEFNYVLRVLAEKKDHTAMQILLSDLR 130
Query: 107 QDAVVLHPQSFNPLLHSLIISHNFHETLQILDYIQQRHLLQPGCTPLIYNSLLIASLRNN 166
++ + Q+F+ + +L+ + + I + + Q G T +++ A
Sbjct: 131 KENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFT---VTAIISALCSRG 187
Query: 167 HIPLAFSIFLKLIELFXXXXXXXXXXAALDSNSNSNSIAFNQLLVALRKADMKLEFQQVF 226
H+ A + D S + + LL E ++V
Sbjct: 188 HVKRALGVM----------------HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 227 HKLMDKKGFALDTWGYNICIHAFGCW--------GDLATSFSLFHQMPG----PDLCTYN 274
M G D + +N + C G + + ++ +M P +YN
Sbjct: 232 QD-MKSAGITPDLFCFNSLLTCL-CERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYN 289
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
L+S L + +V+++ + E + PD +Y +++ T + +I ++M
Sbjct: 290 ILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIER 349
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIHGLIKNGRPEAA 394
GFRP Y L+ VL +V+ A QLFEKM + V Q Y++LI L K G E
Sbjct: 350 GFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 409
Query: 395 YTLF 398
L+
Sbjct: 410 RELW 413
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 613 VDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLAS 672
+ P S +YN ++S + E+ I+ +M C D +Y +++ L GR +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 673 AILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVH 732
I+D ++++G + Y LI L R++ + FE+MK S + Y+ LI
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 733 SKAG 736
K G
Sbjct: 401 CKGG 404
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/190 (17%), Positives = 81/190 (42%), Gaps = 7/190 (3%)
Query: 574 QKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKKGYF 633
+K + + D + + GK A +F+I + +T +I+S+ +G+
Sbjct: 130 RKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHV 189
Query: 634 NEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTL 693
A ++ + + +++ Y ++ G A ++ + G D+ +N+L
Sbjct: 190 KRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSL 249
Query: 694 INALGK-------AGRIDEVNKFFEQMKSSGINPDVVTYNTLIEVHSKAGLLKDAYKFLK 746
+ L + +G + E +M+S I P ++YN L+ + ++++ + L+
Sbjct: 250 LTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILE 309
Query: 747 MMLDAGCTPN 756
M +GC P+
Sbjct: 310 QMKRSGCDPD 319
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 219 KLEFQQVFHKLMDKKGFALDTWGYNICIHAFGCWGDLATSFSLFHQMPG----PDLCTYN 274
K+E + +M K ++++ YN+ ++ + +G + L+ +M P+ TY
Sbjct: 296 KVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYW 355
Query: 275 CLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDHATRIFNQMHNN 334
L++ LCK GKV +A+ +L + D Y+TL + C + ID + + +M +
Sbjct: 356 VLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRD 415
Query: 335 GFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVK-ASCQTYNI 380
GF PG + L D LF+ + EA L + + G+K SC Y +
Sbjct: 416 GFIPGATICERLADSLFEVNR-KEAQMLITIVVKCGIKPKSCSQYGL 461
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 38/320 (11%)
Query: 440 GFVVDLVTITSLMVGIHKHGRWDWTDRLMKHVREGDLVPKVLRWKAGMEAS--IKNPPSK 497
F DL T SL + R+ + L+K V D +LR+ + S I +
Sbjct: 79 SFQPDLRTHLSLTFRVLSERRFSYAKELLKPVAIDD----ILRYPFNVIVSSVIDECGCE 134
Query: 498 KKDYSPMFPS-------KGDFSEIMSILTGSQDANLDSHDTKIEDEEGDEWSLSPHMDKL 550
KK F S G FSE++ + + +++ KI DE + + H+ L
Sbjct: 135 KKVVGRFFNSMIMVYSDNGKFSEVVEVF-----EYMKNNEVKI-----DEKTCTLHLLNL 184
Query: 551 ANQVKSSGYASQLFTPTPGQRVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFE-IFT 609
+ A F+ + + G D + + +++ G+++ A +L E +
Sbjct: 185 -KRCDQMELARDFFSL-----MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGL 238
Query: 610 EAGVDPVSYTYNSIMSSFVKKGYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRAD 669
GV T+ S++ VK+ F E ++ M ++ D+ +Y ++I G G+ +
Sbjct: 239 VKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 670 LASAIL----DRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTY 725
A ++ D+ L+ YL YN ++N + G +++V + + +M S G+ P+ TY
Sbjct: 299 EAERLVLMMHDKKLRVESYL----YNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTY 354
Query: 726 NTLIEVHSKAGLLKDAYKFL 745
L+ KAG + +A FL
Sbjct: 355 WVLMNGLCKAGKVCEAMSFL 374
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 210 LVALRKADMKLEFQQVFHKLMDKKGFALDT-WGYNICIHAFGCWGDLATSFSLFHQM--- 265
L+ L++ D ++E + F LM + G + T + + + C G++ + L +M
Sbjct: 181 LLNLKRCD-QMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLV 239
Query: 266 --PGPDLCTYNCLISVLCKLGKVKDALIVWEDLNACAHQPDHFTYTTLIQGCCKTYKIDH 323
++ T+ +I K ++ +V + + + D +Y LI G K++
Sbjct: 240 KGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEE 299
Query: 324 ATRIFNQMHNNGFRPGTIVYNSLLDVLFKATKVSEACQLFEKMAQEGVKASCQTYNILIH 383
A R+ MH+ R + +YN +++ + V + +L+ +M+ GV + TY +L++
Sbjct: 300 AERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMN 359
Query: 384 GLIKNGRPEAAYTLFCDLKKKGQFVDGITYSII 416
GL K G+ A + +L+ +D YS +
Sbjct: 360 GLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL 392
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 597 KLSLACKLFEIFTEAGVDPVS-YTYNSIMSSFVKKGYFNEAWAIITEMG-EKLCPADIAT 654
++ LA F + E+G+D V+ Y+ +++ G A ++ EMG K A+I T
Sbjct: 189 QMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVT 248
Query: 655 YNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMK 714
+ +I K + +L + K+ LD+ Y LI+ G+++E + M
Sbjct: 249 FKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMH 308
Query: 715 SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVT 759
+ + YN ++ +S+ GL++ + M G TPN T
Sbjct: 309 DKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDT 353
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 571 RVQQKGSDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTEAGVDPVSYTYNSIMSSFVKK 630
++ +K S D+D + F + GK+ A +L + + + SY YN IM+ + +
Sbjct: 270 KLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRF 329
Query: 631 GYFNEAWAIITEMGEKLCPADIATYNMIIQGLGKIGRADLASAILDRLLKQGGYLDIVMY 690
G + + +EM + + TY +++ GL K G+ A + L+ L +D MY
Sbjct: 330 GLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMY 389
Query: 691 NTLINALGKAGRIDEVNKFFEQMKSSGINPDVVT----YNTLIEVHSKAGLLKDAYKFLK 746
+TL + G ID+ + +M G P ++L EV+ K+A +
Sbjct: 390 STLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-----KEAQMLIT 444
Query: 747 MMLDAGCTP 755
+++ G P
Sbjct: 445 IVVKCGIKP 453