Miyakogusa Predicted Gene
- Lj2g3v3057350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3057350.1 tr|Q2LAH5|Q2LAH5_SOYBN Polygalacturonase
(Precursor) OS=Glycine max GN=PG11 PE=2 SV=1,81.82,0,Pectin
lyase-like,Pectin lyase fold/virulence factor;
Glyco_hydro_28,Glycoside hydrolase, family 28;,CUFF.39641.1
(132 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07970.1 | Symbols: QRT2 | Pectin lyase-like superfamily prot... 154 2e-38
AT3G57510.1 | Symbols: ADPG1 | Pectin lyase-like superfamily pro... 137 2e-33
AT2G41850.1 | Symbols: PGAZAT, ADPG2 | polygalacturonase absciss... 128 8e-31
AT1G80170.1 | Symbols: | Pectin lyase-like superfamily protein ... 126 3e-30
AT1G23460.1 | Symbols: | Pectin lyase-like superfamily protein ... 125 9e-30
AT1G70500.1 | Symbols: | Pectin lyase-like superfamily protein ... 119 4e-28
AT2G43890.1 | Symbols: | Pectin lyase-like superfamily protein ... 116 4e-27
AT2G43870.1 | Symbols: | Pectin lyase-like superfamily protein ... 112 8e-26
AT3G59850.1 | Symbols: | Pectin lyase-like superfamily protein ... 108 7e-25
AT2G43860.1 | Symbols: | Pectin lyase-like superfamily protein ... 105 8e-24
AT1G65570.1 | Symbols: | Pectin lyase-like superfamily protein ... 103 3e-23
AT1G05650.1 | Symbols: | Pectin lyase-like superfamily protein ... 103 4e-23
AT3G15720.1 | Symbols: | Pectin lyase-like superfamily protein ... 102 5e-23
AT3G15720.2 | Symbols: | Pectin lyase-like superfamily protein ... 102 5e-23
AT1G17150.1 | Symbols: | Pectin lyase-like superfamily protein ... 100 2e-22
AT1G05660.1 | Symbols: | Pectin lyase-like superfamily protein ... 100 2e-22
AT5G14650.1 | Symbols: | Pectin lyase-like superfamily protein ... 100 4e-22
AT4G18180.1 | Symbols: | Pectin lyase-like superfamily protein ... 100 5e-22
AT2G43880.1 | Symbols: | Pectin lyase-like superfamily protein ... 99 7e-22
AT3G14040.1 | Symbols: | Pectin lyase-like superfamily protein ... 97 4e-21
AT5G27530.1 | Symbols: | Pectin lyase-like superfamily protein ... 96 9e-21
AT1G80140.1 | Symbols: | Pectin lyase-like superfamily protein ... 95 1e-20
AT3G07850.1 | Symbols: | Pectin lyase-like superfamily protein ... 94 2e-20
AT2G15460.1 | Symbols: | Pectin lyase-like superfamily protein ... 94 3e-20
AT1G48100.1 | Symbols: | Pectin lyase-like superfamily protein ... 93 5e-20
AT3G07830.1 | Symbols: | Pectin lyase-like superfamily protein ... 92 7e-20
AT1G56710.1 | Symbols: | Pectin lyase-like superfamily protein ... 92 8e-20
AT3G26610.1 | Symbols: | Pectin lyase-like superfamily protein ... 91 2e-19
AT2G15470.1 | Symbols: | Pectin lyase-like superfamily protein ... 91 2e-19
AT1G02790.1 | Symbols: PGA4 | polygalacturonase 4 | chr1:610681-... 91 2e-19
AT2G33160.1 | Symbols: | glycoside hydrolase family 28 protein ... 91 2e-19
AT2G15450.1 | Symbols: | Pectin lyase-like superfamily protein ... 89 6e-19
AT2G26620.1 | Symbols: | Pectin lyase-like superfamily protein ... 89 7e-19
AT1G78400.1 | Symbols: | Pectin lyase-like superfamily protein ... 87 2e-18
AT1G43080.1 | Symbols: | Pectin lyase-like superfamily protein ... 86 5e-18
AT4G35670.1 | Symbols: | Pectin lyase-like superfamily protein ... 86 6e-18
AT3G07840.1 | Symbols: | Pectin lyase-like superfamily protein ... 86 8e-18
AT5G48140.1 | Symbols: | Pectin lyase-like superfamily protein ... 85 1e-17
AT1G43090.1 | Symbols: | Pectin lyase-like superfamily protein ... 85 2e-17
AT1G43100.1 | Symbols: | Pectin lyase-like superfamily protein ... 85 2e-17
AT4G32375.1 | Symbols: | Pectin lyase-like superfamily protein ... 84 2e-17
AT3G07820.1 | Symbols: | Pectin lyase-like superfamily protein ... 83 4e-17
AT5G44840.1 | Symbols: | Pectin lyase-like superfamily protein ... 83 5e-17
AT1G02460.1 | Symbols: | Pectin lyase-like superfamily protein ... 83 5e-17
AT5G44830.1 | Symbols: | Pectin lyase-like superfamily protein ... 83 5e-17
AT2G40310.1 | Symbols: | Pectin lyase-like superfamily protein ... 82 8e-17
AT4G13760.1 | Symbols: | Pectin lyase-like superfamily protein ... 82 9e-17
AT4G32380.1 | Symbols: | Pectin lyase-like superfamily protein ... 81 2e-16
AT4G01890.1 | Symbols: | Pectin lyase-like superfamily protein ... 80 4e-16
AT1G60590.1 | Symbols: | Pectin lyase-like superfamily protein ... 79 7e-16
AT1G10640.1 | Symbols: | Pectin lyase-like superfamily protein ... 77 3e-15
AT5G17200.1 | Symbols: | Pectin lyase-like superfamily protein ... 63 7e-11
AT4G32370.1 | Symbols: | Pectin lyase-like superfamily protein ... 52 1e-07
AT1G19170.1 | Symbols: | Pectin lyase-like superfamily protein ... 52 1e-07
>AT3G07970.1 | Symbols: QRT2 | Pectin lyase-like superfamily protein
| chr3:2541006-2543370 FORWARD LENGTH=439
Length = 439
Score = 154 bits (388), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+VN ATL GTTNGVRIKTWQGG G AKNI F +I M+NVTN III+Q+YCD+ E C EQ
Sbjct: 308 VVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQK 367
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTT-ASCENVR 119
S+V++SNVLY+NI GTS+ +A+KF CS+ +PCRGI +Q+V L + + D + ASC NV+
Sbjct: 368 SAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 427
Query: 120 YVNRGKFFPRCS 131
RG P C+
Sbjct: 428 LDTRGNVSPLCT 439
>AT3G57510.1 | Symbols: ADPG1 | Pectin lyase-like superfamily
protein | chr3:21283546-21285842 REVERSE LENGTH=431
Length = 431
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 96/130 (73%), Gaps = 6/130 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V+GA + NGVRIKT+QGGSG AKNIKF NI+M+NV N IIIDQ+YCD+ + C++Q+S
Sbjct: 308 VDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDK-DKCEDQES 366
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+V++ NV+Y+NI GTSA++VAI +CS PC+GI L++V ++ TASC+N
Sbjct: 367 AVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIKG-----GTASCKNANVK 421
Query: 122 NRGKFFPRCS 131
N+G P+CS
Sbjct: 422 NQGTVSPKCS 431
>AT2G41850.1 | Symbols: PGAZAT, ADPG2 | polygalacturonase abscission
zone A. thaliana | chr2:17461918-17464059 REVERSE
LENGTH=433
Length = 433
Score = 128 bits (322), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 92/129 (71%), Gaps = 6/129 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V+GA L GT NGVRIKT+QGGSG A NI F NI+M NV N IIIDQ+YCD+++ C + S
Sbjct: 308 VDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSK-CTTEKS 366
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+V++ NV+Y++I GTSASE AI F+CS+ PC+GI L V ++ G+ A+C N V
Sbjct: 367 AVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNIK-GGK----ATCTNANVV 421
Query: 122 NRGKFFPRC 130
++G P+C
Sbjct: 422 DKGAVLPQC 430
>AT1G80170.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:30153646-30155683 REVERSE LENGTH=444
Length = 444
Score = 126 bits (317), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V+ A + T NGVRIKTWQGGSG I F NIKM NV+N IIIDQ YCD +PC Q S
Sbjct: 293 VDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTS 352
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPE-GRGDTTASCENVRY 120
++ + N+ + ++ GTSAS+ AIK CS + PCR I LQD+ LEP G G T + C
Sbjct: 353 AISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYG 412
Query: 121 VNRGKFFP 128
+ G+ +P
Sbjct: 413 SSSGQVYP 420
>AT1G23460.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:8327382-8329622 FORWARD LENGTH=460
Length = 460
Score = 125 bits (313), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+++ A LR TTNG+RIKT+QGGSGY + I+F N++MQ+V N I+IDQ YCD CQ Q
Sbjct: 305 VLDTALLRETTNGLRIKTYQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQT 364
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S+VK+S ++Y+NI GT+ S AIKF CS TVPC I L +V LE G A C +
Sbjct: 365 SAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVNLEGN-DGQVEAYCNSAEG 423
Query: 121 VNRGKFFP 128
G P
Sbjct: 424 FGYGVIHP 431
>AT1G70500.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:26566579-26568729 REVERSE LENGTH=468
Length = 468
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 5 ATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVK 64
A L+ TTNG+RIKTWQGG+GY K ++F N+ MQ+V N IIIDQ YCD CQ Q S+V
Sbjct: 309 AFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQTSAVH 368
Query: 65 LSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYVNRG 124
+S ++Y+NI GT+ S AI F CS VPC I L ++ LE G A C + G
Sbjct: 369 ISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLEGN-DGKVEAYCNSAEGFGYG 427
Query: 125 KFFP 128
P
Sbjct: 428 VVHP 431
>AT2G43890.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:18176924-18178390 FORWARD LENGTH=392
Length = 392
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Query: 5 ATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
+ G+ NGVRIKTW + +G+ +N+ F N+ M+NV N II+DQNYC + C +Q S V
Sbjct: 265 SVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQNYCPSNQGCPKQGSGV 324
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYVNR 123
K+S V+Y+NI GTS ++ A+ FDCSR+ PC+ I L D+ L GR T++C+N++ V
Sbjct: 325 KISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNGR-SATSTCKNIKGVKA 383
Query: 124 GKFFPR 129
G P+
Sbjct: 384 GVVMPQ 389
>AT2G43870.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:18166615-18168264 REVERSE LENGTH=384
Length = 384
Score = 112 bits (279), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V T GT NGVRIK+W + SG+AKNI+F + M NV N IIIDQNYC + C Q
Sbjct: 256 VKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDHD-CPRQV 314
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S +K+S+VL+ +I GTSA+EV +K DCS PC GI L+DV L + + +A C +
Sbjct: 315 SGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASA-CTHAGG 373
Query: 121 VNRGKFFPRC 130
+ G F P C
Sbjct: 374 IEAGFFQPNC 383
>AT3G59850.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:22109343-22111566 REVERSE LENGTH=388
Length = 388
Score = 108 bits (271), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGS-GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V AT GT NGVRIK+W S G+AKNI+F + M NV N I+IDQNYC E C Q
Sbjct: 258 VKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQV 317
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTT 112
S +K+S+V++ +I GTSA+EV +K DCS PC GI +QDV L + TT
Sbjct: 318 SGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATT 369
>AT2G43860.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:18162945-18164428 REVERSE LENGTH=405
Length = 405
Score = 105 bits (262), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V+ GT NGVRIKTW + + +A+NI F +I M+ V N IIIDQ+YC +PC +Q+
Sbjct: 269 VSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLH-KPCPKQE 327
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCEN 117
S VK+SNV Y++I GTS +EVA+ DCS+ PC GI + DV L R ASC+N
Sbjct: 328 SGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHR-PAQASCDN 383
>AT1G65570.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:24374098-24375846 REVERSE LENGTH=397
Length = 397
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V A T NG+RIK+W + +G+ + ++FL M NV+ I+IDQNYC C Q+
Sbjct: 267 VKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILIDQNYCPGDSSCPSQE 326
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S +K+++V+Y I+GTSA+E+AIK DCS VPC GI +Q + L G T SC NV
Sbjct: 327 SGIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSYGEAAKT-SCTNVSG 385
Query: 121 VNRGKFFP 128
G P
Sbjct: 386 KQLGLVTP 393
>AT1G05650.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:1690264-1692126 REVERSE LENGTH=394
Length = 394
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V+ + G+ NGVRIK+W + +G+ +N+ F N+ M+NV N IIIDQNYC + C +
Sbjct: 261 VSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIIIDQNYCPSNQGCPTEH 320
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S VK++ V Y+NI GTSA++ A+K CS++ PC GI LQD+ L T+ C N
Sbjct: 321 SGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNKGTPATSLCFNAVG 380
Query: 121 VNRGKFFP 128
N G P
Sbjct: 381 KNLGVIQP 388
>AT3G15720.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:5325329-5327457 REVERSE LENGTH=456
Length = 456
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNY--CDQAEPCQEQ 59
V RGT NG RIKTWQGGSGYA+ I F I + NV N IIIDQ Y D +
Sbjct: 254 VQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRK 313
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD---TTASCE 116
S+V++S V++ N IGTS SE + F CS VPC I+L+D+ +E G C
Sbjct: 314 SSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCL 373
Query: 117 NVR 119
NVR
Sbjct: 374 NVR 376
>AT3G15720.2 | Symbols: | Pectin lyase-like superfamily protein |
chr3:5325329-5327617 REVERSE LENGTH=452
Length = 452
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNY--CDQAEPCQEQ 59
V RGT NG RIKTWQGGSGYA+ I F I + NV N IIIDQ Y D +
Sbjct: 250 VQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRK 309
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD---TTASCE 116
S+V++S V++ N IGTS SE + F CS VPC I+L+D+ +E G C
Sbjct: 310 SSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCL 369
Query: 117 NVR 119
NVR
Sbjct: 370 NVR 372
>AT1G17150.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:5865707-5867495 FORWARD LENGTH=402
Length = 402
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAK--NIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
MV + GTTNG+RIKTW+ + + N+ + N++M NV N I IDQ YC PC
Sbjct: 267 MVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYC-PYPPCSN 325
Query: 59 Q-DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG-RGDTTASCE 116
DS +++ NV +NI GTS ++VA+KF CS+T PC+ + L D+ L G G +A CE
Sbjct: 326 MGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCE 385
Query: 117 NVRYVNRGKFFP 128
NV GK P
Sbjct: 386 NVDGSATGKMVP 397
>AT1G05660.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:1694286-1696058 REVERSE LENGTH=394
Length = 394
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGS-GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V+ + G+ NGVRIK+W S G+ + + F ++ M+NV N IIIDQNYC E C +
Sbjct: 261 VSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEY 320
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCEN 117
S VK+S V Y+NI GTSA++ A+K CS++ PC GI LQD+ L T+ C N
Sbjct: 321 SGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGTPATSFCFN 377
>AT5G14650.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:4724509-4726328 FORWARD LENGTH=435
Length = 435
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T+ TTNGVRIK+WQGGSG K + F NI++ NV N IIIDQ YCD C + S
Sbjct: 287 VRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGG-CHNETS 345
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V +SN+ Y NI GT E ++F CS ++PC GI L + L+P
Sbjct: 346 AVAVSNINYINIKGTYTKE-PVRFACSDSLPCTGISLSTIELKP 388
>AT4G18180.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:10065626-10067317 FORWARD LENGTH=414
Length = 414
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGY--AKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V + GTTNG+RIKTW G A N+ F NI M NVTN IIIDQ+YC +
Sbjct: 269 VVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISN 328
Query: 59 QDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILE----------PEGR 108
S V+LS + ++NI GTS+S VA++ CSR +PC+ +YL++V L+ R
Sbjct: 329 VPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNR 388
Query: 109 GD--TTASCENVR 119
G+ ++SC NVR
Sbjct: 389 GNEAVSSSCRNVR 401
>AT2G43880.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:18173034-18174482 FORWARD LENGTH=394
Length = 394
Score = 99.0 bits (245), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGS-GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V + T NGVRIKTW S G+ N+ F N+ M NV N +IIDQNYC + C Q
Sbjct: 264 VTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCPNGKGCPRQS 323
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S VK+S V + NI GTS + +A+K DCS + C G+ LQD+ L R + + C N
Sbjct: 324 SGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYM-RRSSASYCRNAHG 382
Query: 121 VNRGKFFPR 129
G PR
Sbjct: 383 RASGVMVPR 391
>AT3G14040.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:4648607-4650226 REVERSE LENGTH=445
Length = 445
Score = 96.7 bits (239), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 2 VNGATLR-----GTTNGVRIKTWQGGS-GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEP 55
V G T+R T NGVRIKTW G G A NI F +I M NV+ ++IDQ YC
Sbjct: 301 VKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 360
Query: 56 CQEQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTAS 114
S VKLS+V +NI GTSA++VA+K CS+ VPC I L D+ L G+ G ++
Sbjct: 361 KAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA 420
Query: 115 CENVRYVNRGKFFP 128
C N++ + GK P
Sbjct: 421 CSNIKPILSGKLVP 434
>AT5G27530.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:9717503-9721097 FORWARD LENGTH=458
Length = 458
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 65/114 (57%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T TTNG RIKTWQGG GYA+NI F NI + NV N IIIDQ Y D+ +DS+V +
Sbjct: 283 TFNKTTNGARIKTWQGGQGYARNISFENITLINVQNPIIIDQQYTDKVLLDATKDSAVAI 342
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S+V Y GT+ +E AI CS C+ + + D+ + E CENV
Sbjct: 343 SSVKYVGFQGTTLNEDAIMLKCSAITYCKDMVIDDIEVTMENGEKPKVECENVE 396
>AT1G80140.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:30146611-30148180 FORWARD LENGTH=336
Length = 336
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNY-CDQAEPCQEQD 60
V+ GTTNG RIKTW GG+GY + I+F +I+ +V N IIIDQ Y C A C E
Sbjct: 205 VSHVNFTGTTNGARIKTWPGGTGYVRGIEFFDIRFSSVQNPIIIDQFYGC--APTCVETM 262
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCS-RTVPCRGIYLQDVILEPEGRGDTTAS 114
V + V Y + GTSA++VA+K +CS +VPC ++++D+ L P D+ +S
Sbjct: 263 KGVHIEKVRYMKMSGTSATKVAMKLECSGESVPCSNLFMRDIDLSPADGIDSVSS 317
>AT3G07850.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:2505813-2507438 REVERSE LENGTH=444
Length = 444
Score = 94.4 bits (233), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 2 VNGATLR-----GTTNGVRIKTWQGGS-GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEP 55
V G T+R T NGVRIKTW G G A NI F +I M NV+ ++IDQ YC
Sbjct: 300 VKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 359
Query: 56 CQEQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTAS 114
S VKLS+V + I GTSA++VA+K CS+ VPC I L D+ L G+ G ++
Sbjct: 360 KAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA 419
Query: 115 CENVRYVNRGKFFP 128
C N++ + GK P
Sbjct: 420 CSNIKPILSGKLVP 433
>AT2G15460.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:6750934-6752647 FORWARD LENGTH=402
Length = 402
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+
Sbjct: 266 IVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHP-PCEH 324
Query: 59 Q---DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTA 113
+ +S V++ N+ +NI GTS ++VA+ CS+ PC+ + L D+ ++ G G +T+
Sbjct: 325 ERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSSTS 384
Query: 114 SCENVRYVNRGKFFPR 129
CENV RGK FPR
Sbjct: 385 VCENVDGFARGKMFPR 400
>AT1G48100.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:17766921-17769625 FORWARD LENGTH=475
Length = 475
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V +R + NG+R+KTWQGG+G N+ F NI+M+NV N II+DQ YC Q++ C+ + S
Sbjct: 326 VRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYC-QSKDCRNETS 384
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEPE 106
+VK+ +V Y+NI GT I F CS TV C I + +V L PE
Sbjct: 385 AVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPE 430
>AT3G07830.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:2499454-2500966 REVERSE LENGTH=397
Length = 397
Score = 92.4 bits (228), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Query: 6 TLRGTTNGVRIKTWQGG--SGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
TL+ T NG+RIKTW S A NI F NI ++NV+N I+IDQ YC + +++ SS+
Sbjct: 259 TLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSI 318
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCENVRYVN 122
KL+N+ ++ I GTS ++ A+K CS+ PC + + D+ ++ G G T C NVR
Sbjct: 319 KLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKL 378
Query: 123 RGKFFPR 129
G FP+
Sbjct: 379 VGTQFPK 385
>AT1G56710.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:21258206-21259922 REVERSE LENGTH=434
Length = 434
Score = 92.0 bits (227), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V +T+ + NGVRIKTWQGGSG I F NI M NV N I+IDQ YC Q C Q S
Sbjct: 296 VTNSTIWNSDNGVRIKTWQGGSGSVSRIVFSNILMVNVRNPIMIDQYYC-QTNNCANQTS 354
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEPE 106
+V +S+VLY NI GT I F CS +VPC + L +V L P
Sbjct: 355 AVIISDVLYANIKGTYDLRSPPIHFGCSDSVPCTNLTLTEVDLFPS 400
>AT3G26610.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:9777025-9780267 FORWARD LENGTH=470
Length = 470
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+V +++ T GVRIKTWQGG G KN+ F NI++++V I+IDQ YCD+++ C+ Q
Sbjct: 308 IVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSK-CKNQT 366
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTT-----A 113
+V +S V Y NI+G+ + ++ CS VPC + L D+ L P G RG T A
Sbjct: 367 RAVSISGVKYNNIVGSFTVQ-PVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQQQQA 425
Query: 114 SCENVRYVNRGKFFP 128
C N +G P
Sbjct: 426 LCWNSYGKTQGPLVP 440
>AT2G15470.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:6754330-6756051 FORWARD LENGTH=404
Length = 404
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+
Sbjct: 266 IVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHP-PCEH 324
Query: 59 Q---DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTA 113
+ +S V++ N+ +NI GTS ++VA+ CS+ PC+ + L D+ ++ G G +T+
Sbjct: 325 ERKGESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNGVKDGSSTS 384
Query: 114 SCENVRYVNRGKFFPR 129
CENV RGK FP+
Sbjct: 385 VCENVDGFARGKMFPQ 400
>AT1G02790.1 | Symbols: PGA4 | polygalacturonase 4 |
chr1:610681-612225 REVERSE LENGTH=422
Length = 422
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 19/142 (13%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAK--NIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
VN T+ T NG+RIKTW GGS +K +IKF NI MQ+V N IIIDQNY +
Sbjct: 285 VNNCTMIETDNGLRIKTW-GGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRG-----G 338
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR----------G 109
DS V +S++L++NI GT+ ++ ++ CS++VPC+G+ + DV L+ G+ G
Sbjct: 339 DSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGG 398
Query: 110 DTTASCENVRYVNRGKF-FPRC 130
A C+N + GK FP C
Sbjct: 399 LVGALCDNANVIFGGKLSFPMC 420
>AT2G33160.1 | Symbols: | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
chr2:14053404-14056246 FORWARD LENGTH=664
Length = 664
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGY--AKNIKFLNIKMQNVTNSIIIDQNYC--DQAEPCQ 57
V + + GTT+G+RIKTW N + NI+M NV N I+IDQ YC Q +
Sbjct: 268 VRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPG 327
Query: 58 EQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCE 116
+ S V++ +V Y NI GTS S+ A+K CS+T PC+ + L ++ L GR G TA CE
Sbjct: 328 KYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCE 387
Query: 117 NVRYVNRGKFFP 128
NV RGK P
Sbjct: 388 NVGGSIRGKIVP 399
>AT2G15450.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:6747536-6749256 FORWARD LENGTH=404
Length = 404
Score = 89.4 bits (220), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V GT++G+RIK W+ + N + NI+M +V I IDQ YC PC+
Sbjct: 266 IVRDVIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHP-PCEH 324
Query: 59 Q---DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTA 113
+ +S V++ N+ +NI GTS ++VA+ CS+ PC+ + L D+ ++ G G +T+
Sbjct: 325 ERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSSTS 384
Query: 114 SCENVRYVNRGKFFP 128
CENV RGK FP
Sbjct: 385 VCENVDGFARGKMFP 399
>AT2G26620.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:11325163-11326835 REVERSE LENGTH=402
Length = 402
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQ- 57
V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+
Sbjct: 266 FVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHP-PCEH 324
Query: 58 EQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTASC 115
E+ S V++ ++ +NI GTS ++VA+ CS++ PC+ + L D+ ++ G G + C
Sbjct: 325 ERKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNGLEDGSSITVC 384
Query: 116 ENVRYVNRGKFFPR 129
ENV RGK FP+
Sbjct: 385 ENVDGFARGKMFPQ 398
>AT1G78400.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:29498281-29499682 REVERSE LENGTH=404
Length = 404
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 1 MVNGATLRGTTNGVRIKTWQ--GGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V + GT+NGVRIKTW G N F N++M +V + I IDQ YC PC
Sbjct: 269 IVRNSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPN-PPCSF 327
Query: 59 QD-SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCE 116
Q S +++ +V +QNI GTS ++ A+K CS+ VPC+ + L ++ + GR G T+ CE
Sbjct: 328 QSFSKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCE 387
Query: 117 NVRYVNRGKFFP 128
NV GK P
Sbjct: 388 NVGGWIGGKISP 399
>AT1G43080.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:16213995-16215828 REVERSE LENGTH=404
Length = 404
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+ +
Sbjct: 267 VRDTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHP-PCEHE 325
Query: 60 ---DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTAS 114
+S V++ ++ +NI GTS + VA+ CS++ PC+ + L D+ L+ G +G +TA
Sbjct: 326 KKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAM 385
Query: 115 CENVRYVNRGKFFPR 129
CENV R K P+
Sbjct: 386 CENVDGSVRSKMVPQ 400
>AT4G35670.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:16914996-16917201 FORWARD LENGTH=394
Length = 394
Score = 85.9 bits (211), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T TTNG RIKTW GG GYA+NI F +I + N N IIIDQ+Y D+ +E S
Sbjct: 260 VTHCTFNQTTNGARIKTWLGGQGYARNISFTDITLVNTKNPIIIDQHYIDKGRLTEE--S 317
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENV 118
+V +SNV + + GTS+++ AI CS T C + + + + G +C+ V
Sbjct: 318 AVAISNVKFVDFRGTSSNKNAITLKCSETTHCVDVVMDGIDITMANGGKPKVNCQYV 374
>AT3G07840.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:2501893-2503475 REVERSE LENGTH=401
Length = 401
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 6 TLRGTTNGVRIKTWQGGS--GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
TL+GT NG+RIKTW + A I F NI + NV+N I+IDQ YC + +++ S++
Sbjct: 259 TLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTI 318
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCENV 118
KL ++ ++NI GTS ++ A+K CS+ PC + + ++ LE +G G T C NV
Sbjct: 319 KLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNV 374
>AT5G48140.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:19518907-19520412 REVERSE LENGTH=395
Length = 395
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 6 TLRGTTNGVRIKTWQGGS--GYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
TL+ T NG+RIKTW + A +I F NI ++NV+N I+IDQ YC + +++ S++
Sbjct: 258 TLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTI 317
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCENVRYVN 122
KL+N+ ++ I GTS ++ A+K CS+ PC+ + + DV ++ G G T C NV
Sbjct: 318 KLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKL 377
Query: 123 RGKFFPR 129
G P+
Sbjct: 378 VGTQIPK 384
>AT1G43090.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:16217197-16219150 REVERSE LENGTH=444
Length = 444
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+ +
Sbjct: 267 VRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHP-PCEHE 325
Query: 60 D---SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTAS 114
S V++ ++ +NI GTS + VA+ CS++ PC+ + L D+ L+ G +G +TA
Sbjct: 326 KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAM 385
Query: 115 CENVRYVNRGK 125
CENV RGK
Sbjct: 386 CENVDGSVRGK 396
>AT1G43100.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:16220519-16222473 REVERSE LENGTH=444
Length = 444
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+ +
Sbjct: 267 VRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHP-PCEHE 325
Query: 60 D---SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEG--RGDTTAS 114
S V++ ++ +NI GTS + VA+ CS++ PC+ + L D+ L+ G +G +TA
Sbjct: 326 KKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAM 385
Query: 115 CENVRYVNRGK 125
CENV RGK
Sbjct: 386 CENVDGSVRGK 396
>AT4G32375.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:15628873-15631596 FORWARD LENGTH=486
Length = 486
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 6 TLRGTTNGVRIKTW--QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPC-QEQDSS 62
+ GT NG RIKTW +GG G AKNI + NI + + IIIDQ+YC+ C +E ++
Sbjct: 228 SFNGTENGARIKTWTVRGGLGVAKNILYENITLTDTKYPIIIDQHYCNGGHNCTKEAMTA 287
Query: 63 VKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCE 116
VK+SNV ++ GT A+++AIK DC C+ I ++ + I + TA C+
Sbjct: 288 VKVSNVTFRYFTGTCANDIAIKLDCDEVTGCKDIVMEHINITSSSTKRPLTAYCQ 342
>AT3G07820.1 | Symbols: | Pectin lyase-like superfamily protein |
chr3:2496597-2498028 REVERSE LENGTH=391
Length = 391
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 6 TLRGTTNGVRIKTWQGG--SGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
TL+ T NG+RIKTW S A +I F +I +++V+N I+IDQ YC + +++ S++
Sbjct: 258 TLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTI 317
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR-GDTTASCENV 118
KL N+ ++NI GTS ++ A+K CS+ PC+ + + D+ ++ G G T C NV
Sbjct: 318 KLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 373
>AT5G44840.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:18104851-18107127 REVERSE LENGTH=381
Length = 381
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T T NG RIKTW G GYAKNI F ++ + N IIIDQNY D+ ++S
Sbjct: 250 VTNCTFIRTDNGARIKTWPNGKGYAKNILFKSLTFRETKNPIIIDQNYVDKGR-LDVEES 308
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENV 118
+V +SNV + ++ GTS + IK DCS+ C+ I L + + C NV
Sbjct: 309 AVAISNVTFTDLRGTSKLDEIIKIDCSKVTYCKDIVLDKIDIATVDGNKPIVECSNV 365
>AT1G02460.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:504897-507099 REVERSE LENGTH=491
Length = 491
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + ++ + NGVRIKTWQGGSG + F NI + +V N IIIDQ YC + C + S
Sbjct: 340 VRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPIIIDQYYC-MTKDCANKTS 398
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V +S++ YQ I GT + F CS VPC + L D+ L P
Sbjct: 399 AVFVSDIAYQGIKGTYDIRSPPMHFGCSDAVPCTNLTLSDIELLP 443
>AT5G44830.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:18100128-18101885 REVERSE LENGTH=332
Length = 332
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T T NGVRIKTW G GYA+NI F ++ + N IIIDQNY D+ ++S
Sbjct: 201 VTNCTFFRTDNGVRIKTWPNGKGYARNILFKDLTFRESKNPIIIDQNYVDKGR-LDVEES 259
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENV 118
+V +SNV + +I GTS IK DCS C+ I L + + C NV
Sbjct: 260 AVAISNVTFTDIRGTSQRNEIIKIDCSEVTYCKDIVLDKIDIATVDGNKPVVECSNV 316
>AT2G40310.1 | Symbols: | Pectin lyase-like superfamily protein |
chr2:16834065-16835711 FORWARD LENGTH=404
Length = 404
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
V GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+ +
Sbjct: 267 VRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHP-PCEHE 325
Query: 60 ---DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTT--AS 114
+S V++ ++ +NI GTS ++VA+ CS++ PC+ I L D+ ++ G +++ A
Sbjct: 326 QKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNGLENSSSIAV 385
Query: 115 CENVRYVNRGKFFPR 129
CENV GK P+
Sbjct: 386 CENVDGSMSGKMVPQ 400
>AT4G13760.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:7988058-7989648 FORWARD LENGTH=404
Length = 404
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 7 LRGTTNGVRIKTWQGGSG--YAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ---DS 61
GT++G+RIKTW+ + N + NI+M +V I IDQ YC PC+ + +S
Sbjct: 272 FNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHP-PCEHEQKGES 330
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD--TTASCENVR 119
V++ N+ +NI GTS ++VA+ CS+ PC+ I L D+ + G D +T CENV
Sbjct: 331 HVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNGLVDSFSTLVCENVD 390
Query: 120 YVNRGKFFPR 129
GK P+
Sbjct: 391 GSVSGKMVPQ 400
>AT4G32380.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:15633641-15635420 FORWARD LENGTH=354
Length = 354
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ-- 59
V T GT NG RIKTW GG G+ KNI + +I + N IIIDQ Y D A ++
Sbjct: 163 VRHCTFTGTQNGARIKTWPGGQGFVKNILYEDITLINANFPIIIDQQYRDNAGQYKQSAG 222
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCENV 118
++VK+S+V +++ GT A+ +AIK DC C I ++ + I + T+ C+
Sbjct: 223 ATAVKVSDVTFRSFTGTCAAPIAIKLDCDPNTGCDNIVMEQINIASSSPKTPLTSYCKFA 282
Query: 119 RYVNR 123
V+R
Sbjct: 283 HVVSR 287
>AT4G01890.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:816210-818428 FORWARD LENGTH=468
Length = 468
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + ++ + NGVRIKTWQGGSG + F NI + V N IIIDQ YC + C + S
Sbjct: 317 VRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPIIIDQYYC-TTKSCANKTS 375
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEPE 106
+V +++++YQ+I GT + F CS VPC + L ++ L P
Sbjct: 376 AVFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNIELLPS 421
>AT1G60590.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:22314426-22316867 REVERSE LENGTH=540
Length = 540
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + T GVRIKTWQGG G K I F NI++ V I+IDQ YCD ++ C S
Sbjct: 391 VRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVIDQFYCDHSK-CMNHTS 449
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V + V Y+ I GT + + F CS + PC + L + L+P
Sbjct: 450 AVSVEGVTYEKIRGTYTVK-PVHFACSDSFPCIDVQLSGIELKP 492
>AT1G10640.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:3515478-3517807 REVERSE LENGTH=532
Length = 532
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + T GVRIKTWQGG G K I F NI++ V I I+Q YCD ++ C+ Q S
Sbjct: 384 VRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSK-CKNQTS 442
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V + V Y+ I GT + + F CS PC + L + L+P
Sbjct: 443 AVAVEGVTYERIKGTYTVK-PVHFACSDNFPCVDVQLSSIELKP 485
>AT5G17200.1 | Symbols: | Pectin lyase-like superfamily protein |
chr5:5653524-5655336 REVERSE LENGTH=421
Length = 421
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T T NGVRIKT+Q GSGYA+ I F +I M N IIIDQ Y + S
Sbjct: 269 VKNCTFTKTQNGVRIKTYQNGSGYARKISFEDINMVASENPIIIDQTYHNGGTNGGISKS 328
Query: 62 S---------------------VKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQD 100
S VK+++V Y I G+SAS+ I +C + C I + +
Sbjct: 329 SSSYQNCHLTAKQRTPSGNGKGVKVTDVRYARIRGSSASDQDITLNCDADLGCSDIVMDN 388
Query: 101 VILEPEGRGDTT-ASCENVR 119
V + G +SC+N
Sbjct: 389 VNMVSATFGHKLFSSCKNAH 408
>AT4G32370.1 | Symbols: | Pectin lyase-like superfamily protein |
chr4:15625558-15627517 FORWARD LENGTH=342
Length = 342
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + GT NG RIKTW GG G AKNI + NI + + III+Q+Y D + S
Sbjct: 275 VRSCSFTGTQNGARIKTWNGGRGLAKNILYENITLIDAGYPIIINQHYFDNKKKHYFDKS 334
Query: 62 SVKL 65
+K+
Sbjct: 335 FLKV 338
>AT1G19170.1 | Symbols: | Pectin lyase-like superfamily protein |
chr1:6616777-6618875 FORWARD LENGTH=506
Length = 506
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 13 GVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKLSNVLYQN 72
G+RIKT G GY +NI + N+ + NV I+I +Y + A+ ++ + LS +
Sbjct: 361 GIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAG 420
Query: 73 IIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYVNRGKFFPR 129
I G V ++ S +P R + +D+ + + C V+ G FPR
Sbjct: 421 IHGQGV-RVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPR 476