Miyakogusa Predicted Gene

Lj2g3v3034080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3034080.1 tr|I3WTA0|I3WTA0_NICAT Jasmonate ZIM domain
protein c.1 OS=Nicotiana attenuata PE=2 SV=1,39.62,5e-17,
,NODE_39350_length_639_cov_118.212830.path1.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain...    57   4e-09

>AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
           protein 3 | chr3:6119968-6122691 FORWARD LENGTH=352
          Length = 352

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 1   MERDFMGLSSKEPLSVIKEEIKNDGWIDSGFTKGSVAQWPFTNKVSA-FPHVMSFKVSQD 59
           MERDF+GL SK     +KEE  ++   DS   +G    W F+NKVSA     +SF+ +Q+
Sbjct: 1   MERDFLGLGSKNSPITVKEET-SESSRDSAPNRG--MNWSFSNKVSASSSQFLSFRPTQE 57

Query: 60  ERTKRMVSEPQKSLNLNEQGGIHFS----------LAPHPVQHDGKMFSVSNQ-----AI 104
           +R ++       + +L   G    S           AP+      +MF  SNQ     A+
Sbjct: 58  DRHRK-----SGNYHLPHSGSFMPSSVADVYDSTRKAPYSSVQGVRMFPNSNQHEETNAV 112

Query: 105 SAPLGNPFQKNHFAAAGQN-MNGANVKLPLLGGKPVTAPHSSLPTIGAVAGMSE 157
           S  +   FQ +H+A  G++ MN  N   PL+G   +  P S LP  G++ G ++
Sbjct: 113 SMSMPG-FQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTD 165