Miyakogusa Predicted Gene

Lj2g3v3022830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022830.1 tr|Q474Q3|Q474Q3_CUPPJ Rhodanese-like protein
OS=Cupriavidus pinatubonensis (strain JMP134 / LMG
119,42.86,7e-19,Rotamase,Peptidyl-prolyl cis-trans isomerase,
PpiC-type; Rhodanese,Rhodanese-like domain; seg,NULL; ,CUFF.39606.1
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19370.1 | Symbols:  | rhodanese-like domain-containing prote...   283   1e-76
AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    48   8e-06

>AT5G19370.1 | Symbols:  | rhodanese-like domain-containing protein
           / PPIC-type PPIASE domain-containing protein |
           chr5:6524247-6526629 REVERSE LENGTH=299
          Length = 299

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 132/208 (63%), Positives = 162/208 (77%), Gaps = 2/208 (0%)

Query: 82  REILVQHXXXXXXXXXXXXXXXXRISKGEDLSDLAVEYSICPSKDEGGMLGWVRKGQMVP 141
           REILVQH                +   GE++SDLA EYSICPSK +GG+LGWV+ GQMVP
Sbjct: 94  REILVQHLLVKNNDVELFAELQKKFLDGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVP 153

Query: 142 EFEEAAFGAPLNKVVRCKTQFGWHLLQVLSEREESLLQDIQPAELHAKFQDPNFSEEAQL 201
           EFEEAAF A LN+VVRC+TQFG HLLQVLSERE   ++DIQ  ELH+K QDP F +EAQL
Sbjct: 154 EFEEAAFKAELNQVVRCRTQFGLHLLQVLSEREP--VKDIQVEELHSKMQDPVFMDEAQL 211

Query: 202 IDVREPEEVDKASLPGFTVLPLRQFGTWGPEVTTKFDPQKDTYVMCHHGVRSLQVSKWLQ 261
           IDVREP E++ ASLPGF V PLRQFGTW P++T+K +P+KDT+V+C  G RS+QV+ WLQ
Sbjct: 212 IDVREPNEIEIASLPGFKVFPLRQFGTWAPDITSKLNPEKDTFVLCKVGGRSMQVANWLQ 271

Query: 262 SQGFRKVYNVSGGIHAYAVQVDPSVPKY 289
           SQGF+ VYN++GGI AY+++VDPS+P Y
Sbjct: 272 SQGFKSVYNITGGIQAYSLKVDPSIPTY 299


>AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr1:9171800-9172716 FORWARD
           LENGTH=142
          Length = 142

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 111 DLSDLAVEYSICPSKDEGGMLGWVRKGQMVPEFEEAAFGAPLN-KVVRCKTQFGWHLLQV 169
           + + +A EYS CPS  +GG LGW  +G+M   F++ AF  P+       K+  G+H+  +
Sbjct: 78  EFAKIAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHI--I 135

Query: 170 LSE 172
           LSE
Sbjct: 136 LSE 138