Miyakogusa Predicted Gene

Lj2g3v3007580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007580.1 Non Chatacterized Hit- tr|G7L1E6|G7L1E6_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,38.46,7e-19,no
description,Cupredoxin; Cupredoxins,Cupredoxin;
PHYTOCYANIN,Plastocyanin-like; seg,NULL; Cu_bind_,CUFF.39595.1
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08500.1 | Symbols: ENODL18, AtENODL18 | early nodulin-like p...   219   1e-57
AT3G27200.1 | Symbols:  | Cupredoxin superfamily protein | chr3:...    48   8e-06

>AT1G08500.1 | Symbols: ENODL18, AtENODL18 | early nodulin-like
           protein 18 | chr1:2689110-2689881 FORWARD LENGTH=228
          Length = 228

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 128/174 (73%), Gaps = 1/174 (0%)

Query: 24  IFCFSGSVEAYKNYTVGDSLGWFDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTNHTVVQ 83
           +   S S +AYKNYTVG+S GWFD  E+P  NYQKW  +K FSLGDFLIFNTD+NH+VVQ
Sbjct: 17  LMLLSLSADAYKNYTVGESTGWFDIQERPSANYQKWADSKSFSLGDFLIFNTDSNHSVVQ 76

Query: 84  TYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGDQC 143
           TY+F TYK CDY++ ++ DTT+WS+++PS T   PV+ +VPLVKEG NYFFS +YDG+QC
Sbjct: 77  TYDFKTYKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSGNYDGEQC 136

Query: 144 KNGQHFKINVTYGQGLPKSLRXXXXXXX-XXXXXXXGDDDAAPDTIVPSNFSHP 196
           K GQHF INVT+GQGLP S                 GDD+ APDTIVP+NF HP
Sbjct: 137 KFGQHFMINVTHGQGLPDSSSPDDAAAPGPSESSQSGDDEVAPDTIVPANFDHP 190


>AT3G27200.1 | Symbols:  | Cupredoxin superfamily protein |
           chr3:10043738-10044340 REVERSE LENGTH=174
          Length = 174

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 25/135 (18%)

Query: 24  IFCFSGSVEA----YKNYTVGDSLGWFDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTNH 79
           I  FSG +         + +G S GW     +  V++  W +++ F +GD ++F     H
Sbjct: 9   ILVFSGLLSVKTALAARHVIGGSQGW-----EQSVDFDSWSSDQSFKVGDQIVFKYSELH 63

Query: 80  TVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYD 139
           +VV+  + T YK CD   + +        S  S  ++      V L K G  YF      
Sbjct: 64  SVVELGSETAYKSCDLGTSVN--------SLSSGNDV------VKLSKTGTRYFACGTV- 108

Query: 140 GDQCKNGQHFKINVT 154
              C+ G   K+NV 
Sbjct: 109 -GHCEQGMKIKVNVV 122