Miyakogusa Predicted Gene
- Lj2g3v3007560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3007560.1 tr|G7KCT9|G7KCT9_MEDTR Cyclin OS=Medicago
truncatula GN=MTR_5g088980 PE=3 SV=1,66.3,0,no
description,Cyclin-like; CYCLIN-B,NULL; CYCLINE,NULL; Cyclin_N,Cyclin,
N-terminal; Cyclin_C,Cycli,CUFF.39591.1
(451 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 337 8e-93
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 322 5e-88
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 301 6e-82
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 297 1e-80
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 214 8e-56
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 211 1e-54
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 202 4e-52
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169... 189 5e-48
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666... 178 7e-45
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 170 2e-42
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951... 167 2e-41
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 166 2e-41
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125... 165 7e-41
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 156 3e-38
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 151 1e-36
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365... 144 2e-34
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 143 3e-34
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 142 3e-34
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302... 142 3e-34
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 139 5e-33
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 138 6e-33
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173... 138 7e-33
AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-7... 127 1e-29
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 79 7e-15
AT1G14750.1 | Symbols: SDS | Cyclin family protein | chr1:507967... 60 3e-09
AT1G14750.2 | Symbols: SDS | Cyclin family protein | chr1:507967... 60 4e-09
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 54 2e-07
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 50 3e-06
AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26142110-261... 50 4e-06
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 49 7e-06
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 337 bits (865), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 193/439 (43%), Positives = 245/439 (55%), Gaps = 66/439 (15%)
Query: 2 ASRAAVLPREQQPRVENKQKMVAGEVR-NRRALKEIGNLVADPAANVTKRITRNAAEKNK 60
+SR + LP ++ E K K VAG R NR+ L +IGNLV T R
Sbjct: 3 SSRVSDLPHQRGIAGEIKPKNVAGHGRQNRKVLGDIGNLV-------TGR---------- 45
Query: 61 KISTEXXXXXXXXXXXXXXXXXXXFATKVDPAQRPPEPXXXXXXXXXXXXXXXXXXXXXX 120
AT D A++ +P
Sbjct: 46 -----------------------DVATGKDVAKKAKQPQQQTKAEVIVISPDENEKCKPH 82
Query: 121 XGRKTRGKSASKNVKAFSSVLTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDI 180
R+T + K F++ L ARSKAA+GL KD V++ID+ D +NELAA EY++DI
Sbjct: 83 FSRRTH----IRGTKTFTATLRARSKAASGL----KDAVIDIDAVDANNELAAVEYVEDI 134
Query: 181 YNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFE 240
+ FY+ E + + + N KMRSIL+DWLV+VHRKFE
Sbjct: 135 FKFYRTVE-----------------EEGGIKDYIGSQPEINEKMRSILIDWLVDVHRKFE 177
Query: 241 LMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAY 300
LMPET YLTIN+VDRFLS+ VHR+ELQL+G+ +MLIA KYEEIWAPEVNDFV ISDNAY
Sbjct: 178 LMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVNDFVCISDNAY 237
Query: 301 VRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSKEMENMAFYLAELGMMHXXX 360
R+QVL MEK+IL +EWY+TVPTPYVFL RY+KA+ P EME + FYLAELG+M
Sbjct: 238 NRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVPCDAEMEKLVFYLAELGLMQYPI 297
Query: 361 XXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSEEHLRECAKLLVNLHTAAPESK 420
R L + PFWTETLKH+TGYSE+ + E AK+L+ L +A ESK
Sbjct: 298 VVLNRPSMLAASAVYAARQILKKTPFWTETLKHHTGYSEDEIMEHAKMLMKLRDSASESK 357
Query: 421 LRAIYKKFCSSDRCAVALL 439
L A++KK+ S+ VALL
Sbjct: 358 LIAVFKKYSVSENAEVALL 376
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 202/472 (42%), Positives = 264/472 (55%), Gaps = 66/472 (13%)
Query: 1 MASRAAV------LPREQQPRVENKQKMVAGEVRNRRALKEIGNLVADPAAN-------V 47
MA+RA V P +++NK G V++RRAL +IGNLV+ P +
Sbjct: 1 MATRANVPEQVRGAPLVDGLKIQNKN----GAVKSRRALGDIGNLVSVPGVQGGKAQPPI 56
Query: 48 TKRITR--------NAAEKNKKISTEXXXXXXXXXXXXXXXXXXXFATKVDP-AQRPPEP 98
+ ITR NA + K I+ + K P A R PE
Sbjct: 57 NRPITRSFRAQLLANAQLERKPINGDNKVPA--------------LGPKRQPLAARNPEA 102
Query: 99 XXXXXXXXXXXXXXXXXXXXXXXGRKTRGKSAS---KNVK-AFSSVLTARSKAAAGLAYK 154
++ K + KN K +SSVL+ARSKAA G+ K
Sbjct: 103 QRAVQKKNLVVKQQTKPVEVIETKKEVTKKEVAMSPKNKKVTYSSVLSARSKAACGIVNK 162
Query: 155 LKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLM 214
K +++ID SD DN LAA EY+DD+Y+FYK E Y M
Sbjct: 163 PK--IIDIDESDKDNHLAAVEYVDDMYSFYKEVE------------KESQPKMY-----M 203
Query: 215 YAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISS 274
+ N KMR+IL+DWL+EVH KFEL ET YLT+NI+DRFLS+KAV ++ELQLVGIS+
Sbjct: 204 HIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISA 263
Query: 275 MLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIK 334
+LIASKYEEIW P+VND V ++DNAY +Q+LVMEK IL NLEWYLTVPT YVFLVR+IK
Sbjct: 264 LLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIK 323
Query: 335 ASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHY 394
AS S EMENM +LAELGMMH RC+L++ P WT+TL+ +
Sbjct: 324 ASM-SDPEMENMVHFLAELGMMH-YDTLTFCPSMLAASAVYTARCSLNKSPAWTDTLQFH 381
Query: 395 TGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAKNL 446
TGY+E + +C+KLL LH+ ES+LRA+YKK+ ++ VA++ PAK+L
Sbjct: 382 TGYTESEIMDCSKLLAFLHSRCGESRLRAVYKKYSKAENGGVAMVS-PAKSL 432
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 301 bits (771), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 208/310 (67%), Gaps = 28/310 (9%)
Query: 137 FSSVLTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCX 196
+SSVL ARSKAA+ ++ID D +N+LAA EY++D+Y FYK EVV +
Sbjct: 128 YSSVLDARSKAASK--------TLDIDYVDKENDLAAVEYVEDMYIFYK--EVVNES--- 174
Query: 197 XXXXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRF 256
Y M+ + KMRSIL+DWLVEVH KF+L PET YLT+NI+DRF
Sbjct: 175 -------KPQMY-----MHTQPEIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRF 222
Query: 257 LSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNL 316
LS+K V R+ELQLVG+S++LIASKYEEIW P+VND V ++DN+Y +Q+LVMEKTIL NL
Sbjct: 223 LSLKTVPRRELQLVGVSALLIASKYEEIWPPQVNDLVYVTDNSYNSRQILVMEKTILGNL 282
Query: 317 EWYLTVPTPYVFLVRYIKASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXX 376
EWYLTVPT YVFLVR+IKAS S +++EN+ +LAELG+MH
Sbjct: 283 EWYLTVPTQYVFLVRFIKASG-SDQKLENLVHFLAELGLMH-HDSLMFCPSMLAASAVYT 340
Query: 377 XRCTLHRIPFWTETLKHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAV 436
RC L++ P WT+TLK +TGYSE L +C+KLL +H+ A ESKLR + KK+ R AV
Sbjct: 341 ARCCLNKTPTWTDTLKFHTGYSESQLMDCSKLLAFIHSKAGESKLRGVLKKYSKLGRGAV 400
Query: 437 ALLYVPAKNL 446
AL+ PAK+L
Sbjct: 401 ALIS-PAKSL 409
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 203/313 (64%), Gaps = 24/313 (7%)
Query: 139 SVLTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXX 198
SVLTARSKAA GL K K+ +V+IDS+D++N+LAA EY++DIY+FYK E
Sbjct: 128 SVLTARSKAACGLEKKQKEKIVDIDSADVENDLAAVEYVEDIYSFYKSVE---------- 177
Query: 199 XXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLS 258
+ M + N KMR ILV+WL++VH +FEL PETFYLT+NI+DRFLS
Sbjct: 178 -------SEWRPRDYMASQPDINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLS 230
Query: 259 MKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEW 318
+K V RKELQLVG+S++L+++KYEEIW P+V D V I+D+AY +Q+LVMEKTIL+ LEW
Sbjct: 231 VKPVPRKELQLVGLSALLMSAKYEEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEW 290
Query: 319 YLTVPTPYVFLVRYIKASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXR 378
YLTVPT YVFL R+IKAS K MENM YLAELG+MH R
Sbjct: 291 YLTVPTHYVFLARFIKASIADEK-MENMVHYLAELGVMHYDTMIMFSPSMVAASAIYAAR 349
Query: 379 CTLHRIPFWTETLKHYTGYSEEHLRECAKLLV-----NLHTAAPESKLRAIYKKFCSSDR 433
+L ++P WT TLKH+TGYSE L +CAKLL + S A+ KK+ +R
Sbjct: 350 SSLRQVPIWTSTLKHHTGYSETQLMDCAKLLAYQQWKQQEEGSESSTKGALRKKYSKDER 409
Query: 434 CAVALLYVPAKNL 446
AVAL+ PAK L
Sbjct: 410 FAVALI-PPAKAL 421
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 182/314 (57%), Gaps = 23/314 (7%)
Query: 128 KSASKNVKAFSSVLTARSK--AAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYK 185
K SK K+F+S+L SK G + + L +ID D N+L EY+DDIY FY
Sbjct: 348 KPKSKRRKSFTSLLVNGSKFDEKNGETTEPEKLP-SID--DESNQLEVAEYVDDIYQFYW 404
Query: 186 LTEVVLHALCXXXXXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPET 245
E + AL + A+ + R IL++WL+EVH KF+LM ET
Sbjct: 405 TAEALNPALGH----------------YLSAHAEVSPVTRGILINWLIEVHFKFDLMHET 448
Query: 246 FYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQV 305
YLT++++DR+LS +H+ E+QL+G++++L+ASKYE+ W P + D + IS +Y R+Q+
Sbjct: 449 LYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAESYTREQI 508
Query: 306 LVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSKEMENMAFYLAELGMMHXXXXXXXX 365
L ME+++L L++ L PTPYVF++R++KA+ S+K++E +AFYL EL ++
Sbjct: 509 LGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQ-SNKKLEQLAFYLIELCLVE-YEALKYK 566
Query: 366 XXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIY 425
RCTLH P WT L ++T Y+ +++C+ +++ H AA LR Y
Sbjct: 567 PSLLCASAIYVARCTLHMTPVWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTGNLRVTY 626
Query: 426 KKFCSSDRCAVALL 439
+K+ + DR VA+L
Sbjct: 627 EKYINPDRSNVAVL 640
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 174/286 (60%), Gaps = 18/286 (6%)
Query: 152 AYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALI 211
A K ++ V++ID+ D +N LAA EYI D++ FYK E + C
Sbjct: 153 ADKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLS---CVPP------------- 196
Query: 212 SLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVG 271
+ M + N +MR IL+DWL+EVH KFELM ET YLTIN++DRFL++ + RK+LQLVG
Sbjct: 197 NYMDNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVG 256
Query: 272 ISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVR 331
++++L+A KYEE+ P V+D +LISD AY R++VL MEK + N L++ ++PTPYVF+ R
Sbjct: 257 VTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKR 316
Query: 332 YIKASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETL 391
++KA+ S K++E ++F++ EL ++ +CTL W++T
Sbjct: 317 FLKAAQ-SDKKLEILSFFMIELCLVE-YEMLEYLPSKLAASAIYTAQCTLKGFEEWSKTC 374
Query: 392 KHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVA 437
+ +TGY+E+ L CA+ +V H A KL +++K+ +S C A
Sbjct: 375 EFHTGYNEKQLLACARKMVAFHHKAGTGKLTGVHRKYNTSKFCHAA 420
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 169/279 (60%), Gaps = 19/279 (6%)
Query: 154 KLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISL 213
++++ V++IDS D +N L+ EYI+DIY FYK E C + +
Sbjct: 155 EVEESVMDIDSCDKNNPLSVVEYINDIYCFYKKNE------CRSCVPPNYMENQHDI--- 205
Query: 214 MYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSM-KAVHRKELQLVGI 272
N +MR IL DWL+EVH KFELM ET YLTIN++DRFL++ + + RK+LQLVG+
Sbjct: 206 -------NERMRGILFDWLIEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGV 258
Query: 273 SSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRY 332
++ML+A KYEE+ P V+D +LISD AY R ++L MEK + N L++ +PTPYVF+ R+
Sbjct: 259 TAMLLACKYEEVSVPVVDDLILISDKAYTRTEILDMEKLMANTLQFNFCLPTPYVFMRRF 318
Query: 333 IKASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLK 392
+KA+ S K++E ++F++ EL ++ + TL W++T +
Sbjct: 319 LKAAQ-SDKKLELLSFFMIELCLVE-YEMLQYTPSQLAASAIYTAQSTLKGYEDWSKTSE 376
Query: 393 HYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSS 431
++GY+EE L EC++ +V LH A KL +++K+ +S
Sbjct: 377 FHSGYTEEALLECSRKMVGLHHKAGTGKLTGVHRKYNTS 415
>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
chr4:16901744-16903766 FORWARD LENGTH=429
Length = 429
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 170/290 (58%), Gaps = 22/290 (7%)
Query: 159 VVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMYAYK 218
V++ID D +N LAA EY+ D+Y+FY+ TE ++ + L Y +
Sbjct: 155 VLDIDEYDANNSLAAVEYVQDLYDFYRKTE------------------RFSCVPLDYMAQ 196
Query: 219 WTNV--KMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSML 276
++ KMR+IL+DWL+EVH KFELM ET +LT+N++DRFLS +AV RK+LQLVG+ ++L
Sbjct: 197 QFDISDKMRAILIDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALL 256
Query: 277 IASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKAS 336
+A KYEE+ P V D V+ISD AY R VL MEK +L+ L++ +++PT Y FL R++KA+
Sbjct: 257 LACKYEEVSVPIVEDLVVISDKAYTRTDVLEMEKIMLSTLQFNMSLPTQYPFLKRFLKAA 316
Query: 337 TPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTG 396
S K++E +A +L EL ++ +CT+H W T + +
Sbjct: 317 Q-SDKKLEILASFLIELALVD-YEMVRYPPSLLAATAVYTAQCTIHGFSEWNSTCEFHCH 374
Query: 397 YSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAKNL 446
YSE L EC + +V LH A KL +++K+ SS +A Y A L
Sbjct: 375 YSENQLLECCRRMVRLHQKAGTDKLTGVHRKYSSSKFGYIATKYEAAHFL 424
>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
FORWARD LENGTH=429
Length = 429
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 161/275 (58%), Gaps = 22/275 (8%)
Query: 159 VVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMYAYK 218
+V+ID D N LAA EY+ D+Y FY+ E ++ + + Y +
Sbjct: 154 IVDIDVLDSKNSLAAVEYVQDLYAFYRTME------------------RFSCVPVDYMMQ 195
Query: 219 WT--NVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSML 276
N KMR+IL+DWL+EVH KF+L+ ET +LT+N++DRFLS + V RK+LQLVG+ ++L
Sbjct: 196 QIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALL 255
Query: 277 IASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKAS 336
+A KYEE+ P V D VLISD AY R VL MEKT+L+ L++ +++PT Y FL R++KA+
Sbjct: 256 LACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAA 315
Query: 337 TPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTG 396
+ K+ E +A +L EL ++ +CTL W T + +
Sbjct: 316 Q-ADKKCEVLASFLIELALVE-YEMLRFPPSLLAATSVYTAQCTLDGSRKWNSTCEFHCH 373
Query: 397 YSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSS 431
YSE+ L EC++ LV+LH A L +Y+K+ +S
Sbjct: 374 YSEDQLMECSRKLVSLHQRAATGNLTGVYRKYSTS 408
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 152/277 (54%), Gaps = 26/277 (9%)
Query: 159 VVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMYAYK 218
+VNIDS MD +L A+ + DIY +++EV AL +
Sbjct: 162 IVNIDSDLMDPQLCAS-FACDIYEHLRVSEV---------------NKRPALDYMERTQS 205
Query: 219 WTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIA 278
N MRSIL+DWLVEV ++ L PET YL +N VDR+L+ A++++ LQL+G++ M+IA
Sbjct: 206 SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIA 265
Query: 279 SKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTP 338
+KYEE+ P+V DF I+DN Y+R ++L ME ++LN L++ LT PT FL R+++A+
Sbjct: 266 AKYEEVCVPQVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQ- 324
Query: 339 SSKEM-----ENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLH--RIPFWTETL 391
KE+ E +A YL EL ++ + TLH R P W TL
Sbjct: 325 GRKEVPSLLSECLACYLTELSLLD-YAMLRYAPSLVAASAVFLAQYTLHPSRKP-WNATL 382
Query: 392 KHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKF 428
+HYT Y +H+ C K L+ L S + AI KK+
Sbjct: 383 EHYTSYRAKHMEACVKNLLQLCNEKLSSDVVAIRKKY 419
>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
chr1:12595110-12599628 FORWARD LENGTH=491
Length = 491
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 123/209 (58%), Gaps = 39/209 (18%)
Query: 128 KSASKNVKAFSSVLTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLT 187
K +K V+ + A+SKAA G+ K K +++ID SD DN +AA EY+DD+Y+FYK
Sbjct: 226 KQQTKPVEVIETKRNAQSKAACGIVNKPK--ILDIDESDKDNHVAAVEYVDDMYSFYKEV 283
Query: 188 EVVLHALCXXXXXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFY 247
E Y M+ N KMR+IL+DWL+EVH KFEL ET Y
Sbjct: 284 E------------KESQPKMY-----MHIQTEMNEKMRAILIDWLLEVHIKFELNLETLY 326
Query: 248 LTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLV 307
LT+NI+DRFL +KAV ++ELQ VND V ++DNAY +Q+LV
Sbjct: 327 LTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNAYSSRQILV 366
Query: 308 MEKTILNNLEWYLTVPTPYVFLVRYIKAS 336
M+K IL NLEWYLT+PT YVFL +IKAS
Sbjct: 367 MKKAILGNLEWYLTIPTQYVFLFCFIKAS 395
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 20/292 (6%)
Query: 156 KDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMY 215
K+ +VNIDS++ D +L AT + DIY + +E Y +
Sbjct: 175 KNQIVNIDSNNGDPQLCAT-FACDIYKHLRASEA-----------KKRPDVDY----MER 218
Query: 216 AYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSM 275
K N MR ILVDWL+EV ++ L+PET YLT+N +DR+LS + R++LQL+G++ M
Sbjct: 219 VQKDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACM 278
Query: 276 LIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKA 335
+IA+KYEEI AP+V +F I+DN Y++ +VL ME +LN L++ +T PT FL R+++A
Sbjct: 279 MIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRA 338
Query: 336 STPSSK----EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETL 391
+ + ++E MA Y+AEL ++ W TL
Sbjct: 339 AHGVHEAPLMQLECMANYIAELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTL 398
Query: 392 KHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPA 443
+HYT Y LR C K L L + A S L A+ +K+ VA + P+
Sbjct: 399 QHYTQYKAMELRGCVKDLQRLCSTAHGSTLPAVREKYSQHKYKFVAKKFCPS 450
>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
chr1:12595110-12599354 FORWARD LENGTH=483
Length = 483
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 120/205 (58%), Gaps = 39/205 (19%)
Query: 132 KNVKAFSSVLTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVL 191
+ K + T R+KAA G+ K K +++ID SD DN +AA EY+DD+Y+FYK E
Sbjct: 227 QQTKPVEVIETKRNKAACGIVNKPK--ILDIDESDKDNHVAAVEYVDDMYSFYKEVE--- 281
Query: 192 HALCXXXXXXXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTIN 251
Y M+ N KMR+IL+DWL+EVH KFEL ET YLT+N
Sbjct: 282 ---------KESQPKMY-----MHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVN 327
Query: 252 IVDRFLSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKT 311
I+DRFL +KAV ++ELQ VND V ++DNAY +Q+LVM+K
Sbjct: 328 IIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNAYSSRQILVMKKA 367
Query: 312 ILNNLEWYLTVPTPYVFLVRYIKAS 336
IL NLEWYLT+PT YVFL +IKAS
Sbjct: 368 ILGNLEWYLTIPTQYVFLFCFIKAS 392
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR IL+DWLVEV +++L+ +T YLT+N++DRF+S + +++LQL+GI+ MLIASKYEE
Sbjct: 206 MRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEE 265
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSK-- 341
I AP + +F I+DN Y R +VL ME +LN+L + L+VPT FL R+I+A+ S K
Sbjct: 266 ISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVP 325
Query: 342 --EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPF-WTETLKHYTGYS 398
EME +A Y AEL + R TL + W +TL+HYT Y
Sbjct: 326 LIEMEYLANYFAELTLTE-YTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQHYTRYE 384
Query: 399 EEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVPAK 444
L+ + L S L AI+ K+ VA L P +
Sbjct: 385 TSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPER 430
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 156/309 (50%), Gaps = 24/309 (7%)
Query: 141 LTARSKAAAGLAYKLKDLVVNIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXX 200
+T + + +G+ L+ VV+IDS+ D + + Y DIY+ + E+ L
Sbjct: 140 ITEQQEDGSGVMELLQ--VVDIDSNVEDPQCCSL-YAADIYDNIHVAELQQRPLANY--- 193
Query: 201 XXXXXXXYALISLMYAYKWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMK 260
+ + + MR IL+DWLVEV ++L+P+T YLT+N++DRFLS
Sbjct: 194 ------------MELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNS 241
Query: 261 AVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYL 320
+ R+ LQL+G+S MLIASKYEE+ AP V +F I+ N Y R +VL ME ILN + + L
Sbjct: 242 YIERQRLQLLGVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRL 301
Query: 321 TVPTPYVFLVRYIKASTPSSK----EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXX 376
+VPT FL R+IKA+ S K E+E +A YLAEL ++
Sbjct: 302 SVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAELTLVE-YSFLRFLPSLIAASAVFL 360
Query: 377 XRCTLHRIPF-WTETLKHYTGYSEEHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCA 435
R TL + W TL+HYT Y L+ + +L L A +K+ +
Sbjct: 361 ARWTLDQTDHPWNPTLQHYTRYEVAELKNTVLAMEDLQLNTSGCTLAATREKYNQPKFKS 420
Query: 436 VALLYVPAK 444
VA L P +
Sbjct: 421 VAKLTSPKR 429
>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
FORWARD LENGTH=450
Length = 450
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 115/223 (51%), Gaps = 4/223 (1%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR ILVDWLVEV ++ L +T YLT+ ++D FL V R++LQL+GI+ MLIASKYEE
Sbjct: 221 MRGILVDWLVEVSEEYTLASDTLYLTVYLIDWFLHGNYVQRQQLQLLGITCMLIASKYEE 280
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPS---- 339
I AP + +F I+DN Y R QVL ME +L + + + PTP FL R+++A+ S
Sbjct: 281 ISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSP 340
Query: 340 SKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSE 399
S E+E +A YL EL ++ W TL+HYT Y
Sbjct: 341 SLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKA 400
Query: 400 EHLRECAKLLVNLHTAAPESKLRAIYKKFCSSDRCAVALLYVP 442
L+ L +L L AI K+ +VA+L P
Sbjct: 401 SDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSVAVLTSP 443
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR++LVDWLVEV +++L+ +T YLTI+ VDRFLS+K ++R++LQLVG+S+MLIASKYEE
Sbjct: 130 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEE 189
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSK-- 341
I P+V DF I+DN + +Q+V+ ME IL L++ L PT FL R+ + + K
Sbjct: 190 IGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDS 249
Query: 342 --EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSE 399
++E + YL+EL M+ + W + L+ YT Y
Sbjct: 250 QLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKA 309
Query: 400 EHLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+ C ++ +L+ + + L A+ K+
Sbjct: 310 ADLQVCVGIIHDLYLSRRGNTLEAVRNKY 338
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR +LVDWLVEV +++L+ +T YL ++ +DRFLS+K V+++ LQL+G++SMLIASKYEE
Sbjct: 120 MRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEE 179
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTP----S 339
I P V+DF I+DN Y +Q+++ ME IL L++ L PT FL R+ + + S
Sbjct: 180 ITPPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMS 239
Query: 340 SKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSE 399
+ME + YL+EL M+ + W L+ YT Y
Sbjct: 240 HLQMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKA 299
Query: 400 EHLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+EC ++ +L+ + L AI +K+
Sbjct: 300 GDLKECVAMIHDLYLSRKCGALEAIREKY 328
>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
chr1:30214694-30216861 FORWARD LENGTH=461
Length = 461
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR ILVDWLVEV ++ L+P+T YLT+ ++D FL V R+ LQL+GI+ MLIASKYEE
Sbjct: 230 MRGILVDWLVEVSEEYTLVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYEE 289
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPS---- 339
I AP + +F I+DN Y R QVL ME +L + + + PT FL R+++A+ S
Sbjct: 290 IHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQ 349
Query: 340 SKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPF-WTETLKHYTGYS 398
S EME +A YL EL +M + TL++ W TL+HYT Y
Sbjct: 350 SLEMEFLANYLTELTLMD-YPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHYTTYK 408
Query: 399 EEHLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+ L +L L +I K+
Sbjct: 409 ASDLKASVHALQDLQLNTKGCSLNSIRMKY 438
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEE 283
MR +LVDWLVEV +++L ET YLT++ +DRFLS+K V++++LQLVG+S+MLIASKYEE
Sbjct: 137 MRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEE 196
Query: 284 IWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSK-- 341
I P+V+DF I+DN + +Q V+ ME IL L++ L PT F+ R+ + + K
Sbjct: 197 ISPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVP 256
Query: 342 --EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSE 399
++E + YL+EL ++ + W + L+ YT Y
Sbjct: 257 HLQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKA 316
Query: 400 EHLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+ C ++ +L+ + L+A+ +K+
Sbjct: 317 ADLQVCVGIIHDLYLSRRGGALQAVREKY 345
>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=370
Length = 370
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 224 MRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIAS-KYE 282
MR++LVDWLVEV +++L+ +T YLTI+ VDRFLS+K ++R++LQLVG+S+MLIAS KYE
Sbjct: 130 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYE 189
Query: 283 EIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSK- 341
EI P+V DF I+DN + +Q+V+ ME IL L++ L PT FL R+ + + K
Sbjct: 190 EIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKD 249
Query: 342 ---EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYS 398
++E + YL+EL M+ + W + L+ YT Y
Sbjct: 250 SQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYK 309
Query: 399 EEHLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+ C ++ +L+ + + L A+ K+
Sbjct: 310 AADLQVCVGIIHDLYLSRRGNTLEAVRNKY 339
>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
chr1:17303676-17305197 FORWARD LENGTH=327
Length = 327
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 225 RSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIASKYEEI 284
R +LVDWLVEV +FEL+ ET YLT++ +DRFLS+K V+ LQLVG+S+M IASKYEE
Sbjct: 92 RGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEK 151
Query: 285 WAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTPSSK--- 341
P+V DF I+ N Y +Q VL ME+ IL LE+ L PT FL R+I+ + K
Sbjct: 152 RRPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPN 211
Query: 342 -EMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXXXXRCTLHRIPFWTETLKHYTGYSEE 400
++E + YL+EL M+ L W++ L+ T Y
Sbjct: 212 LQLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAA 271
Query: 401 HLRECAKLLVNLHTAAPESKLRAIYKKF 428
L+ C +++++L+ + E +A+ +K+
Sbjct: 272 DLQVCVEIMLDLYLSRSEGASKAVREKY 299
>AT1G20590.1 | Symbols: | Cyclin family protein |
chr1:7131166-7132183 REVERSE LENGTH=199
Length = 199
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 256 FLSMKAVHRKELQLVGISSMLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNN 315
FL++ + RK+LQLVG++++L+A KYEE+ P V+D +LISD AY R++VL MEK + N
Sbjct: 3 FLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANT 62
Query: 316 LEWYLTVPTPYVFLVRYIKASTPSSKEMENMAFYLAELGMMHXXXXXXXXXXXXXXXXXX 375
L++ ++PTPYVF+ R++KA+ S K++E ++F++ EL ++
Sbjct: 63 LQFNFSLPTPYVFMKRFLKAA-QSDKKLEILSFFMIELCLVE-YEMLEYLPSKLAASAIY 120
Query: 376 XXRCTLHRIPFWTETLKHYTGYSEEHLRECAKLLVNLHTAAPESKLRA 423
+CTL W++T + +TGY+EE L CA+ +V H A KL
Sbjct: 121 TAQCTLKGFEEWSKTCEFHTGYNEEQLLACARKMVAFHHKAGTGKLTG 168
>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
Length = 192
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 161 NIDSSDMDNELAATEYIDDIYNFYKLTEVVLHALCXXXXXXXXXXXXYALISLMYAYKWT 220
+IDS D ++ Y+ DIY + + EV Y + K
Sbjct: 88 DIDSRSDDPQMCGP-YVADIYEYLRQLEV---------KPKQRPLPDY----IEKVQKDV 133
Query: 221 NVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKELQLVGISSMLIAS 279
MR +LVDWLVEV +++L ET YLT++ +DRFLS+K V++++LQLVG+S+MLIAS
Sbjct: 134 TPSMRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>AT1G14750.1 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=578
Length = 578
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 223 KMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAV-HRKELQLVGISSMLIASKY 281
++RSI+V W+V+ L ET +L + ++DRFLS + + L LVGI+S+ +A++
Sbjct: 385 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 444
Query: 282 EEIW---APEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTP 338
EE + +F I + Y R +V+ ME + L + PT + FL Y+KA+
Sbjct: 445 EENQPYNSIRKRNFT-IQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAAR- 502
Query: 339 SSKEMENMAFYLA 351
++ E+E A LA
Sbjct: 503 ANPEVERKAKSLA 515
>AT1G14750.2 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=410
Length = 410
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 223 KMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAV-HRKELQLVGISSMLIASKY 281
++RSI+V W+V+ L ET +L + ++DRFLS + + L LVGI+S+ +A++
Sbjct: 217 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 276
Query: 282 EEIW---APEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKASTP 338
EE + +F I + Y R +V+ ME + L + PT + FL Y+KA+
Sbjct: 277 EENQPYNSIRKRNFT-IQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAAR- 334
Query: 339 SSKEMENMAFYLA 351
++ E+E A LA
Sbjct: 335 ANPEVERKAKSLA 347
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 229 VDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKE---LQLVGISSMLIASKYEEIW 285
V W+++V + P T YL +N +DRFL + + +QL+ ++ + +A+K EEI
Sbjct: 86 VAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEIL 145
Query: 286 APEVNDFVLISDNAYVRQQVLV--MEKTILNNLEWYLTVPTPYVFLVRYIKASTPSS 340
P + DF ++ Y+ + + ME +L+ L+W L TP+ F+ + PS
Sbjct: 146 VPSLFDFQ-VAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSG 201
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 221 NVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKE---LQLVGISSMLI 277
NV R L +W+ + + P F L +N +DRFLS+ + + LQL+ ++ + +
Sbjct: 75 NVGRRDAL-NWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSL 133
Query: 278 ASKYEEIWAPEVNDFVLISDNAYV--RQQVLVMEKTILNNLEWYLTVPTPYVFLVRYIKA 335
A+K EE P + D + + D +V + V ME +LN L+W L TP ++ +++
Sbjct: 134 AAKIEETEVPMLID-LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRK 192
Query: 336 STPSSKEMEN 345
+ +E N
Sbjct: 193 MSKCDQEPSN 202
>AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26142110-26143750 REVERSE LENGTH=242
Length = 242
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 221 NVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKE---LQLVGISSMLI 277
NV R L +W+ + + P F L +N +DRFLS+ + + LQL+ ++ + +
Sbjct: 75 NVGRRDAL-NWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSL 133
Query: 278 ASKYEEIWAPEVNDFVLISDNAYVRQ--QVLVMEKTILNNLEWYLTVPTPYVFLVRYIKA 335
A+K EE P + D + + D +V + V ME +LN L+W L TP ++ +++
Sbjct: 134 AAKIEETEVPMLID-LQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRK 192
Query: 336 STPSSKEMEN 345
+ +E N
Sbjct: 193 MSKCDQEPSN 202
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 218 KWTNVKMRSILVDWLVEVHRKFELMPETFYLTINIVDRFLSMKAVHRKE---LQLVGISS 274
K T+ R I +DW++ +F +T Y+ I+ D FL + + + E ++L+ ++
Sbjct: 65 KTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDETWAMRLLSVAC 124
Query: 275 MLIASKYEEIWAPEVNDFVLISDNAYVRQQVLVMEKTILNNLEWYLTVPTPYVFLVRYI 333
+ +A+K EE P ++ + D + + E IL+ L+W + + TP+ + ++
Sbjct: 125 LSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFL 183