Miyakogusa Predicted Gene
- Lj2g3v3007550.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3007550.2 Non Chatacterized Hit- tr|H9V1J5|H9V1J5_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,84.31,6e-18,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.39594.2
(457 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26770.2 | Symbols: | plectin-related | chr2:11404257-114077... 694 0.0
AT2G26770.1 | Symbols: | plectin-related | chr2:11404257-114077... 694 0.0
AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 452 e-127
AT3G56480.1 | Symbols: | myosin heavy chain-related | chr3:2093... 443 e-124
>AT2G26770.2 | Symbols: | plectin-related | chr2:11404257-11407743
REVERSE LENGTH=496
Length = 496
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/493 (69%), Positives = 393/493 (79%), Gaps = 37/493 (7%)
Query: 1 MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
MTRV+RDF D++Q + VPAVS+DV FA+SRFP+Y+IGAN+QI + KDDPKV+SMKEVVAR
Sbjct: 1 MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFDVKDDPKVMSMKEVVAR 60
Query: 61 ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
ETAQL++QQ RLSVRDLA+KFEKG HVLLKKLRDALESLR
Sbjct: 61 ETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESLR 120
Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
GRVAGRN+DDVEEAIAMVEALAVQLTQREGEL EK+EVKKLA+FLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDEE 180
Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
RAFARAEI++ARAAVQRVEEAL+EHE+MS+ASGKQD+E L KEVQEARRIKMLHQPS+VM
Sbjct: 181 RAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVM 240
Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEIL----------- 289
DME+EL+ALR QLAEK++H+L+LQK+LA +K EEN+ YE++G E L
Sbjct: 241 DMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRVRPCSN 300
Query: 290 --------------------------GATKSVYAPEPFDVGRLLQVDIISESQHIMLSTT 323
GATKSVYAPEPFDVGR+L DII + + LST
Sbjct: 301 DAPDLSKCTIQWYRSSSDGSKKELISGATKSVYAPEPFDVGRVLHADIIYDGHSLSLSTV 360
Query: 324 GPIDPAAGLGTYVEALVRKHDTEFNVVVTQMNGSNHPAESIHVLHVGKMRVKLCKGKTTI 383
G IDPAAGLG+YVEALVRKHD +FNVVVTQM+G +H +ESIH+ HVGKMR+KLCKGKT I
Sbjct: 361 GKIDPAAGLGSYVEALVRKHDVDFNVVVTQMSGEDHTSESIHLFHVGKMRIKLCKGKTVI 420
Query: 384 AKEYYSSSMQLCGVRGGGNAAAQALFWQPKPGHSFVLAFESERERNASIMLARRFAFDCN 443
AKEYYSS+MQLCGVRGGGNAAAQAL+WQ K G SFV+AFESERERNA+IMLARRFA DCN
Sbjct: 421 AKEYYSSAMQLCGVRGGGNAAAQALYWQAKKGVSFVIAFESERERNAAIMLARRFACDCN 480
Query: 444 IMLAGPDDRAPLG 456
+ LAGP+DR G
Sbjct: 481 VTLAGPEDRTETG 493
>AT2G26770.1 | Symbols: | plectin-related | chr2:11404257-11407743
REVERSE LENGTH=496
Length = 496
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/493 (69%), Positives = 393/493 (79%), Gaps = 37/493 (7%)
Query: 1 MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
MTRV+RDF D++Q + VPAVS+DV FA+SRFP+Y+IGAN+QI + KDDPKV+SMKEVVAR
Sbjct: 1 MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFDVKDDPKVMSMKEVVAR 60
Query: 61 ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
ETAQL++QQ RLSVRDLA+KFEKG HVLLKKLRDALESLR
Sbjct: 61 ETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESLR 120
Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
GRVAGRN+DDVEEAIAMVEALAVQLTQREGEL EK+EVKKLA+FLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDEE 180
Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
RAFARAEI++ARAAVQRVEEAL+EHE+MS+ASGKQD+E L KEVQEARRIKMLHQPS+VM
Sbjct: 181 RAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVM 240
Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEIL----------- 289
DME+EL+ALR QLAEK++H+L+LQK+LA +K EEN+ YE++G E L
Sbjct: 241 DMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRVRPCSN 300
Query: 290 --------------------------GATKSVYAPEPFDVGRLLQVDIISESQHIMLSTT 323
GATKSVYAPEPFDVGR+L DII + + LST
Sbjct: 301 DAPDLSKCTIQWYRSSSDGSKKELISGATKSVYAPEPFDVGRVLHADIIYDGHSLSLSTV 360
Query: 324 GPIDPAAGLGTYVEALVRKHDTEFNVVVTQMNGSNHPAESIHVLHVGKMRVKLCKGKTTI 383
G IDPAAGLG+YVEALVRKHD +FNVVVTQM+G +H +ESIH+ HVGKMR+KLCKGKT I
Sbjct: 361 GKIDPAAGLGSYVEALVRKHDVDFNVVVTQMSGEDHTSESIHLFHVGKMRIKLCKGKTVI 420
Query: 384 AKEYYSSSMQLCGVRGGGNAAAQALFWQPKPGHSFVLAFESERERNASIMLARRFAFDCN 443
AKEYYSS+MQLCGVRGGGNAAAQAL+WQ K G SFV+AFESERERNA+IMLARRFA DCN
Sbjct: 421 AKEYYSSAMQLCGVRGGGNAAAQALYWQAKKGVSFVIAFESERERNAAIMLARRFACDCN 480
Query: 444 IMLAGPDDRAPLG 456
+ LAGP+DR G
Sbjct: 481 VTLAGPEDRTETG 493
>AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: myosin heavy chain-related
(TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins
in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26;
Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes
- 45 (source: NCBI BLink). | chr2:17036768-17039474
REVERSE LENGTH=492
Length = 492
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/475 (49%), Positives = 327/475 (68%), Gaps = 41/475 (8%)
Query: 17 VPAVSSDVTFATSRFPSYKIGANNQIMETKD-DPKVVSMKEVVARETAQLLEQQNRLSVR 75
V +S+DV+FA++ FP+YK+G ++QI++ D D KV S+K+VV +ET L +Q +LSVR
Sbjct: 19 VEPISADVSFASNHFPTYKLGPDDQIVDEPDEDDKVPSVKDVVGKETGDLSDQHKKLSVR 78
Query: 76 DLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLRGRVAGRNQDDVEEAI 135
DLA KF+K HV+LKKLRDALE++RGR+ GRN++ VE+AI
Sbjct: 79 DLACKFDKNLAAASKLVDEAKLNDVTSLEGHVMLKKLRDALETMRGRMDGRNREAVEKAI 138
Query: 136 AMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEERAFARAEIDNARAAV 195
+MVEALAV+LTQ EGELI +K EVKKLA+FLK+AS+DAKKLV++E++FA AEI++ARA V
Sbjct: 139 SMVEALAVKLTQNEGELIHDKFEVKKLASFLKKASDDAKKLVNQEKSFACAEIESARALV 198
Query: 196 QRVEEALKEHERMSQASGKQ--DLEQLKKEVQEARRIKMLHQPSKVMDMEHELQALRAQL 253
++ A +E E S+AS Q ++E+L +EVQEARRI+ LH+P+ V+ M+HEL+ L++Q+
Sbjct: 199 MKLGGAFEEQELCSKASRDQGPNVEKLVEEVQEARRIRRLHKPTMVIGMQHELRDLKSQI 258
Query: 254 AEKTRHYLRLQKELARTKKGEENVPHFYELEGNE-------------------------- 287
EK+ + ++LQ+E+A KK E + Y L+G +
Sbjct: 259 QEKSAYSVKLQREIAIIKKAEGSKSCPYVLDGAQSLGSCLRIRASSDSGIDISKCSIHWY 318
Query: 288 -----------ILGATKSVYAPEPFDVGRLLQVDIISESQHIMLSTTGPIDPAAGLGTYV 336
I GA +SVYAPEPFDVGR++Q DI+S Q ++T GPI+ AAGL + V
Sbjct: 319 RAASESSRREAISGANRSVYAPEPFDVGRVIQADIVSNGQKFTVTTDGPINTAAGLQSRV 378
Query: 337 EALVRKHDTEFNVVVTQMNGSNHPAESIHVLHVGKMRVKLCKGKTTIAKEYYSSSMQLCG 396
E+L+RK ++EF VV++QMNG +H + S HV VGK R+KL +G T A+E YS+SMQLCG
Sbjct: 379 ESLLRKSNSEFTVVISQMNGQDHASRS-HVFTVGKARIKLSRGWITKAREIYSTSMQLCG 437
Query: 397 VRGGGNAAAQALFWQPKPGHSFVLAFESERERNASIMLARRFAFDCNIMLAGPDD 451
VRG N A+ALFWQ + G +F+L FESE+ERNA+I+LAR +A+DCN+ L GPDD
Sbjct: 438 VRGNANVPAKALFWQLRKGLTFLLTFESEQERNAAIVLARTYAYDCNVTLVGPDD 492
>AT3G56480.1 | Symbols: | myosin heavy chain-related |
chr3:20936480-20938986 REVERSE LENGTH=490
Length = 490
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/467 (50%), Positives = 312/467 (66%), Gaps = 42/467 (8%)
Query: 26 FATSRFPSYKIGANNQIME-TKDDPKVVSMKEVVARETAQLLEQQNRLSVRDLANKFEKG 84
FA+ FP+YK+G +NQI+E K+D K S+KE V +E+ L +Q RLSVRDLA+KF+K
Sbjct: 25 FASDHFPTYKLGPDNQIVEEPKEDEKGPSVKETVEKESELLSDQHKRLSVRDLASKFDKN 84
Query: 85 XXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLRGRVAGRNQDDVEEAIAMVEALAVQ 144
HV+LKKLRDALE +RGR G+N+ DVE AI+MVEALAV+
Sbjct: 85 LAAAVSLANEAKLREVASLEGHVMLKKLRDALEYMRGRTDGQNKQDVETAISMVEALAVK 144
Query: 145 LTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEERAFARAEIDNARAAVQRVEEALKE 204
LTQ EGELIQEK EVKKL NFLKQ SEDAKKLV++E++F+ AEI+ ARA V R+ EA +E
Sbjct: 145 LTQNEGELIQEKFEVKKLGNFLKQTSEDAKKLVNQEKSFSCAEIETARAVVLRLGEAFEE 204
Query: 205 HERMSQASGKQ--DLEQLKKEVQEARRIKMLHQPSKVMDMEHELQALRAQLAEKTRHYLR 262
ER+S+AS Q D+E+L +EVQEAR+IK +H P+KVM M+HEL LR ++ EK + ++
Sbjct: 205 QERISEASRAQGPDVEKLVEEVQEARQIKRMHHPTKVMGMQHELHGLRNRIQEKYMNSVK 264
Query: 263 LQKELARTKKGEENVPHFYELEGNE----------------------------------- 287
L KE+A K+ EE+ + LEG +
Sbjct: 265 LHKEIAIIKRVEESKSCPFVLEGKQSLGSCLRIRVNAQDNAPDLSNCSIQWYRAACETSR 324
Query: 288 ---ILGATKSVYAPEPFDVGRLLQVDIISESQHIMLSTTGPIDPAAGLGTYVEALVRKHD 344
I GA +S+YAPEPFDVGR+LQ DI+S Q ++T P+DP +GL + VE+L+RK +
Sbjct: 325 REAISGAIQSMYAPEPFDVGRILQADILSNGQKFTVTTDDPVDPDSGLPSRVESLMRKSN 384
Query: 345 TEFNVVVTQMNGSNHPAESIHVLHVGKMRVKLCKGKTTIAKEYYSSSMQLCGVRGGGNAA 404
+EF+VV++QMNG ++ + S HV VGK R+KL +G T A+E YS+SMQLCGVRG A
Sbjct: 385 SEFSVVISQMNGQDYASRS-HVFTVGKTRIKLSRGWITKARELYSTSMQLCGVRGNIKAP 443
Query: 405 AQALFWQPKPGHSFVLAFESERERNASIMLARRFAFDCNIMLAGPDD 451
+A+FWQP+ +F+L FESE ERNA+I LAR++AFDC++ L GPDD
Sbjct: 444 TKAVFWQPRKSLTFILTFESEHERNAAIALARKYAFDCSVTLLGPDD 490