Miyakogusa Predicted Gene

Lj2g3v3007550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007550.1 Non Chatacterized Hit- tr|B4FMG9|B4FMG9_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55.43,3e-16,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,CUFF.39594.1
         (303 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26770.2 | Symbols:  | plectin-related | chr2:11404257-114077...   432   e-121
AT2G26770.1 | Symbols:  | plectin-related | chr2:11404257-114077...   432   e-121
AT2G40820.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   264   4e-71
AT3G56480.1 | Symbols:  | myosin heavy chain-related | chr3:2093...   264   5e-71

>AT2G26770.2 | Symbols:  | plectin-related | chr2:11404257-11407743
           REVERSE LENGTH=496
          Length = 496

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/295 (73%), Positives = 253/295 (85%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+RDF D++Q + VPAVS+DV FA+SRFP+Y+IGAN+QI + KDDPKV+SMKEVVAR
Sbjct: 1   MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFDVKDDPKVMSMKEVVAR 60

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETAQL++QQ RLSVRDLA+KFEKG                     HVLLKKLRDALESLR
Sbjct: 61  ETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESLR 120

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRVAGRN+DDVEEAIAMVEALAVQLTQREGEL  EK+EVKKLA+FLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDEE 180

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFARAEI++ARAAVQRVEEAL+EHE+MS+ASGKQD+E L KEVQEARRIKMLHQPS+VM
Sbjct: 181 RAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVM 240

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DME+EL+ALR QLAEK++H+L+LQK+LA  +K EEN+   YE++G E LGS L++
Sbjct: 241 DMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRV 295


>AT2G26770.1 | Symbols:  | plectin-related | chr2:11404257-11407743
           REVERSE LENGTH=496
          Length = 496

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/295 (73%), Positives = 253/295 (85%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+RDF D++Q + VPAVS+DV FA+SRFP+Y+IGAN+QI + KDDPKV+SMKEVVAR
Sbjct: 1   MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFDVKDDPKVMSMKEVVAR 60

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETAQL++QQ RLSVRDLA+KFEKG                     HVLLKKLRDALESLR
Sbjct: 61  ETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESLR 120

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRVAGRN+DDVEEAIAMVEALAVQLTQREGEL  EK+EVKKLA+FLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDEE 180

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFARAEI++ARAAVQRVEEAL+EHE+MS+ASGKQD+E L KEVQEARRIKMLHQPS+VM
Sbjct: 181 RAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVM 240

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DME+EL+ALR QLAEK++H+L+LQK+LA  +K EEN+   YE++G E LGS L++
Sbjct: 241 DMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRV 295


>AT2G40820.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           plasma membrane; EXPRESSED IN: 21 plant structures;
           EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
           thaliana protein match is: myosin heavy chain-related
           (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins
           in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26;
           Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes
           - 45 (source: NCBI BLink). | chr2:17036768-17039474
           REVERSE LENGTH=492
          Length = 492

 Score =  264 bits (675), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 142/282 (50%), Positives = 206/282 (73%), Gaps = 3/282 (1%)

Query: 17  VPAVSSDVTFATSRFPSYKIGANNQIMETKD-DPKVVSMKEVVARETAQLLEQQNRLSVR 75
           V  +S+DV+FA++ FP+YK+G ++QI++  D D KV S+K+VV +ET  L +Q  +LSVR
Sbjct: 19  VEPISADVSFASNHFPTYKLGPDDQIVDEPDEDDKVPSVKDVVGKETGDLSDQHKKLSVR 78

Query: 76  DLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLRGRVAGRNQDDVEEAI 135
           DLA KF+K                      HV+LKKLRDALE++RGR+ GRN++ VE+AI
Sbjct: 79  DLACKFDKNLAAASKLVDEAKLNDVTSLEGHVMLKKLRDALETMRGRMDGRNREAVEKAI 138

Query: 136 AMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEERAFARAEIDNARAAV 195
           +MVEALAV+LTQ EGELI +K EVKKLA+FLK+AS+DAKKLV++E++FA AEI++ARA V
Sbjct: 139 SMVEALAVKLTQNEGELIHDKFEVKKLASFLKKASDDAKKLVNQEKSFACAEIESARALV 198

Query: 196 QRVEEALKEHERMSQASGKQ--DLEQLKKEVQEARRIKMLHQPSKVMDMEHELQALRAQL 253
            ++  A +E E  S+AS  Q  ++E+L +EVQEARRI+ LH+P+ V+ M+HEL+ L++Q+
Sbjct: 199 MKLGGAFEEQELCSKASRDQGPNVEKLVEEVQEARRIRRLHKPTMVIGMQHELRDLKSQI 258

Query: 254 AEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
            EK+ + ++LQ+E+A  KK E +    Y L+G + LGS L++
Sbjct: 259 QEKSAYSVKLQREIAIIKKAEGSKSCPYVLDGAQSLGSCLRI 300


>AT3G56480.1 | Symbols:  | myosin heavy chain-related |
           chr3:20936480-20938986 REVERSE LENGTH=490
          Length = 490

 Score =  264 bits (675), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 146/273 (53%), Positives = 193/273 (70%), Gaps = 3/273 (1%)

Query: 26  FATSRFPSYKIGANNQIME-TKDDPKVVSMKEVVARETAQLLEQQNRLSVRDLANKFEKG 84
           FA+  FP+YK+G +NQI+E  K+D K  S+KE V +E+  L +Q  RLSVRDLA+KF+K 
Sbjct: 25  FASDHFPTYKLGPDNQIVEEPKEDEKGPSVKETVEKESELLSDQHKRLSVRDLASKFDKN 84

Query: 85  XXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLRGRVAGRNQDDVEEAIAMVEALAVQ 144
                                HV+LKKLRDALE +RGR  G+N+ DVE AI+MVEALAV+
Sbjct: 85  LAAAVSLANEAKLREVASLEGHVMLKKLRDALEYMRGRTDGQNKQDVETAISMVEALAVK 144

Query: 145 LTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEERAFARAEIDNARAAVQRVEEALKE 204
           LTQ EGELIQEK EVKKL NFLKQ SEDAKKLV++E++F+ AEI+ ARA V R+ EA +E
Sbjct: 145 LTQNEGELIQEKFEVKKLGNFLKQTSEDAKKLVNQEKSFSCAEIETARAVVLRLGEAFEE 204

Query: 205 HERMSQASGKQ--DLEQLKKEVQEARRIKMLHQPSKVMDMEHELQALRAQLAEKTRHYLR 262
            ER+S+AS  Q  D+E+L +EVQEAR+IK +H P+KVM M+HEL  LR ++ EK  + ++
Sbjct: 205 QERISEASRAQGPDVEKLVEEVQEARQIKRMHHPTKVMGMQHELHGLRNRIQEKYMNSVK 264

Query: 263 LQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           L KE+A  K+ EE+    + LEG + LGS L++
Sbjct: 265 LHKEIAIIKRVEESKSCPFVLEGKQSLGSCLRI 297