Miyakogusa Predicted Gene

Lj2g3v3007530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007530.1 tr|H1XX59|H1XX59_9BACT Late embryogenesis
abundant protein 2 (Precursor) OS=Caldithrix abyssi DSM
13,22.9,3e-17,LEA14-like,NULL; no description,Immunoglobulin-like
fold; LEA_2,Late embryogenesis abundant protein,,CUFF.39598.1
         (322 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44060.2 | Symbols:  | Late embryogenesis abundant protein, g...   453   e-128
AT2G44060.1 | Symbols:  | Late embryogenesis abundant protein, g...   453   e-128
AT1G01470.1 | Symbols: LEA14, LSR3 | Late embryogenesis abundant...    74   2e-13
AT2G46140.1 | Symbols:  | Late embryogenesis abundant protein | ...    74   2e-13

>AT2G44060.2 | Symbols:  | Late embryogenesis abundant protein,
           group 2 | chr2:18226922-18227988 FORWARD LENGTH=325
          Length = 325

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/314 (71%), Positives = 259/314 (82%), Gaps = 8/314 (2%)

Query: 1   MSTSDDKPEVVERGLFK--------NXXXXXXXXXXXXXXXFIEKVKDFIHDIGEKIEEA 52
           MSTS+DKPE++ R + +                        F++KVKDFIHDIGEK+E  
Sbjct: 1   MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGT 60

Query: 53  IGFGKPTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPIPLIDINYLIESDGRKLVSGLI 112
           IGFGKPTADVS IHIP IN+ + D+VVDVL+KNPNPVPIPLID+NYL+ESDGRKLVSGLI
Sbjct: 61  IGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLIDVNYLVESDGRKLVSGLI 120

Query: 113 PDAGTIHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVDLIFDVPILGRLTLPL 172
           PDAGT+ AHGEETVKIP+TLIYDDIK TY DI PG IIPYR+KVDLI DVP+LGRLTLPL
Sbjct: 121 PDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRIKVDLIVDVPVLGRLTLPL 180

Query: 173 EKTGEIPIPYKPDIDVDKIQFEKFSFEETIANLHLKLENKNDFDLGLNALDYEVWLGDVS 232
           EK GEIPIP KPD+D++KI+F+KFS EET+A LH++L+N NDFDLGLN LD EVWL DVS
Sbjct: 181 EKCGEIPIPKKPDVDIEKIKFQKFSLEETVAILHVRLQNMNDFDLGLNDLDCEVWLCDVS 240

Query: 233 IGGAQLTKSAKLEKSGISYIDVPITFRPKDFGSALWDMIRGRGTGYTMKGNIDVDTPFGA 292
           IG A++  S KL+K+G   I+VP+TFRPKDFGSALWDMIRG+GTGYT+KGNIDVDTPFGA
Sbjct: 241 IGKAEIADSIKLDKNGSGLINVPMTFRPKDFGSALWDMIRGKGTGYTIKGNIDVDTPFGA 300

Query: 293 MKLPIIKEGGTTRL 306
           MKLPIIKEGG TRL
Sbjct: 301 MKLPIIKEGGETRL 314


>AT2G44060.1 | Symbols:  | Late embryogenesis abundant protein,
           group 2 | chr2:18226922-18227988 FORWARD LENGTH=325
          Length = 325

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/314 (71%), Positives = 259/314 (82%), Gaps = 8/314 (2%)

Query: 1   MSTSDDKPEVVERGLFK--------NXXXXXXXXXXXXXXXFIEKVKDFIHDIGEKIEEA 52
           MSTS+DKPE++ R + +                        F++KVKDFIHDIGEK+E  
Sbjct: 1   MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGT 60

Query: 53  IGFGKPTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPIPLIDINYLIESDGRKLVSGLI 112
           IGFGKPTADVS IHIP IN+ + D+VVDVL+KNPNPVPIPLID+NYL+ESDGRKLVSGLI
Sbjct: 61  IGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIPLIDVNYLVESDGRKLVSGLI 120

Query: 113 PDAGTIHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVDLIFDVPILGRLTLPL 172
           PDAGT+ AHGEETVKIP+TLIYDDIK TY DI PG IIPYR+KVDLI DVP+LGRLTLPL
Sbjct: 121 PDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPYRIKVDLIVDVPVLGRLTLPL 180

Query: 173 EKTGEIPIPYKPDIDVDKIQFEKFSFEETIANLHLKLENKNDFDLGLNALDYEVWLGDVS 232
           EK GEIPIP KPD+D++KI+F+KFS EET+A LH++L+N NDFDLGLN LD EVWL DVS
Sbjct: 181 EKCGEIPIPKKPDVDIEKIKFQKFSLEETVAILHVRLQNMNDFDLGLNDLDCEVWLCDVS 240

Query: 233 IGGAQLTKSAKLEKSGISYIDVPITFRPKDFGSALWDMIRGRGTGYTMKGNIDVDTPFGA 292
           IG A++  S KL+K+G   I+VP+TFRPKDFGSALWDMIRG+GTGYT+KGNIDVDTPFGA
Sbjct: 241 IGKAEIADSIKLDKNGSGLINVPMTFRPKDFGSALWDMIRGKGTGYTIKGNIDVDTPFGA 300

Query: 293 MKLPIIKEGGTTRL 306
           MKLPIIKEGG TRL
Sbjct: 301 MKLPIIKEGGETRL 314


>AT1G01470.1 | Symbols: LEA14, LSR3 | Late embryogenesis abundant
           protein | chr1:172295-172826 REVERSE LENGTH=151
          Length = 151

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 34  FIEKVKDFIHDIGEKIEEAIGFGKPTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPIPL 93
            ++K KDF+ D      +     KP   V+ + +  +N   V+ +  V + NP    IP+
Sbjct: 4   LLDKAKDFVAD------KLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPI 57

Query: 94  IDINYLIESDGRKLVSGLIPDAGTIHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIPYR 153
            +I++   S GR++  G IPD G++ A     + IPV + Y  +     D+     I Y 
Sbjct: 58  CEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYE 117

Query: 154 VKVDLIFDVPILGRLTLPLEKTGEIPIP 181
           +++ L  D+P++G  T+P+   GEI +P
Sbjct: 118 LQIGLTIDLPVVGEFTIPISSKGEIKLP 145


>AT2G46140.1 | Symbols:  | Late embryogenesis abundant protein |
           chr2:18959163-18960362 FORWARD LENGTH=166
          Length = 166

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%)

Query: 58  PTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPIPLIDINYLIESDGRKLVSGLIPDAGT 117
           P A V  +    +    VD    V +KNP    IP+  I+Y+++S  R + SG IPD G+
Sbjct: 37  PEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGS 96

Query: 118 IHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVDLIFDVPILGRLTLPLEKTGE 177
           +   G   + +PV + Y        D+     I Y++ + L FD+P++G +T+P+   GE
Sbjct: 97  LVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGE 156

Query: 178 IPIP 181
           I +P
Sbjct: 157 IKLP 160