Miyakogusa Predicted Gene

Lj2g3v3007500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007500.1 CUFF.39589.1
         (584 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12290.1 | Symbols: DGS1 | dgd1 suppressor 1 | chr5:3974374-3...   657   0.0  

>AT5G12290.1 | Symbols: DGS1 | dgd1 suppressor 1 |
           chr5:3974374-3978066 REVERSE LENGTH=602
          Length = 602

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/578 (56%), Positives = 435/578 (75%), Gaps = 14/578 (2%)

Query: 21  LYSNYIRNRLKDLHRFSPFNLLSNLAARFRLSPRRE---CFPLPLPYNLLDSSTTMT--- 74
            YS+Y+ NRL  L   S    L  ++  +R +  R+    FPLPLP +   SST  +   
Sbjct: 25  FYSSYLWNRLASLLPTSKPIFLGKISNLYRQTVSRKRSISFPLPLPSDFPSSSTITSNVS 84

Query: 75  -ESSRAHVVLEDVLERVLMNLHLIEKNLQFWQSRAEGSDARKAYFMVFERGPRAFIDETV 133
            +++R H VLE+++  VL NLH I+K+L FW+SRAEGS+ARKAYFM+FERGP AF++E+ 
Sbjct: 85  ADTARIHGVLEEIMADVLSNLHDIQKSLDFWRSRAEGSNARKAYFMIFERGPTAFVNEST 144

Query: 134 RFL-RCVAQSSSSQNLCQFASDYISERKTVLDSLRFSLATFLAQVYVEVDKIRKELRTDP 192
           +F+ + +++ S+ Q+LCQ +S +++ER  VL  LR +LA+F+AQ+YVE+DK  ++L   P
Sbjct: 145 KFVSKSLSEDSAMQHLCQSSSSHMTERMRVLVELRSALASFIAQLYVELDKRGEDLVKIP 204

Query: 193 ENRLPSLLATINDLFSTLEAS------MRQSDYSMDGSHSTPLLFEKLPEINPESSQSTD 246
           E  LPSLLA IN LFS LE S      +R+ D S+DGS+  PL+F++LPE+N E SQ TD
Sbjct: 205 EKALPSLLAVINGLFSNLEGSFSHLHAVRECDSSVDGSYPMPLVFDRLPEVNEEGSQWTD 264

Query: 247 CEIKDAINSVYQNLDKLDSYISFLVIKHRKPKKITQYWIRYTCGAVGLSVCSIWLLRHSS 306
           CE+ DAIN V++NL+KL+SY+S +V KHRKP+++T YW+RYTCGAVGLSV SIWLLRHSS
Sbjct: 265 CELTDAINLVHKNLEKLNSYLSVMVGKHRKPRRMTLYWVRYTCGAVGLSVFSIWLLRHSS 324

Query: 307 LMGSSDLDNWIKEAKDSTVSFFKDRVEKPILSIRDELFETFRKRHHGIMDLEEVQLTFNS 366
           LMGSSD++NW+ +AK++T+SFF D VE+P+LSIRDELF+TFRKRH G+M+ EEVQLT +S
Sbjct: 325 LMGSSDIENWVHDAKEATMSFFSDHVEQPLLSIRDELFDTFRKRHKGVMETEEVQLTQDS 384

Query: 367 LHRMLLAFSEQTKGEKFPANASDQEMLAIVMDRYEKELVHPIQNLVSGELARAMLIQVQK 426
           LHRML  F EQ   EK P NASDQEML +VM+RYEKELVHPI NL+SGELAR +LIQVQK
Sbjct: 385 LHRMLRNFCEQATREKVPDNASDQEMLEVVMNRYEKELVHPIHNLLSGELARGLLIQVQK 444

Query: 427 LKLDIETAMLELNQILRANEINXXXXXXXXXXXXXXXXIMLVRAWFKQDTKAEGRGRAAQ 486
           LKLDIETAMLEL+QILRANEIN                + ++R W K+D+KA+GRGR A+
Sbjct: 445 LKLDIETAMLELDQILRANEINFAILAALPAFFLSIVMLTVLRTWLKKDSKAQGRGRIAR 504

Query: 487 KMRRLLVVEVEERIIQYQNYVNEGLERDAQCMYGMLLYSLYRLYHSVKRHPEDSGKWQRL 546
             RRLLVVE+E+RI+QYQ+Y+ +G ++DA+ ++G+L+YSL RLY  V++    + +W  +
Sbjct: 505 IHRRLLVVEIEKRIMQYQSYIEQGRDKDAETVFGLLIYSLERLYRVVEKPARATDEWDLV 564

Query: 547 RRDIIDLARPGLQTADKLYVTSRMERVYDCLLPILKRQ 584
           ++D+I+L RP  QT+ KL VT R+  VYDCLLP LKRQ
Sbjct: 565 KQDLIELGRPQQQTSYKLTVTQRLVTVYDCLLPTLKRQ 602