Miyakogusa Predicted Gene

Lj2g3v3007320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007320.1 Non Chatacterized Hit- tr|I1JIT7|I1JIT7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.42,0,no
description,NULL; seg,NULL; UBA,Ubiquitin-associated/translation
elongation factor EF1B, N-termin,CUFF.39587.1
         (652 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation elong...   486   e-137
AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation elong...   400   e-111

>AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr2:11489648-11491588
           FORWARD LENGTH=646
          Length = 646

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 322/667 (48%), Positives = 409/667 (61%), Gaps = 41/667 (6%)

Query: 1   MSPASRSKSKDKKACKEAQKASAKPTGSGNAVAGIPTSGYNPLLGTFHTLDMSPSPATSP 60
           MSPA++SKSKDKK  KEAQKAS KP+ S N  + +  SGYNPLLGTF  LD     + SP
Sbjct: 6   MSPATKSKSKDKKTGKEAQKASPKPSLSVNGNSSLAASGYNPLLGTFQALDSVSIASISP 65

Query: 61  IHSNSRFRNIDETDEHPGSSVVAGLEYDSVSNNGSWSGESEDHKEKTSNPAVRLESLPGA 120
           +   SRFR+IDE D       V G+E DSVSNNGS SGESEDHKEKT+N  ++ E +PGA
Sbjct: 66  LQY-SRFRSIDEAD-------VNGIESDSVSNNGSCSGESEDHKEKTTNLPLKQEVIPGA 117

Query: 121 DNDKREKIRQKNERKHQRQRERRAQELHEKCCGYLMSRKLEALAQQLVAMGFSHERATMA 180
           DNDKREK+RQKNERKHQRQ+ERRAQEL+EKC  YL+SRKLEA  QQ+VAMG S E AT A
Sbjct: 118 DNDKREKVRQKNERKHQRQKERRAQELNEKCSTYLISRKLEARTQQIVAMGISQEHATTA 177

Query: 181 LIMNEGRVEESVAWLFEGSEEADSHKDKNFNDNLKIDISEELARVADMETRYGCSKQEVE 240
           L+MN+G+VEESV WLF+  EE    +      NLKIDI+EELAR+  ME +  C++QE+E
Sbjct: 178 LMMNDGKVEESVHWLFDRLEEEIEKQSIQSPGNLKIDITEELARITKMELQLKCTRQEIE 237

Query: 241 RVIVNYEGDLDKAAETLREARHDPPSAPPKPEETGDPFIINNGKQ-SGVVSQSPRPQTKP 299
           R +V  EGDLD+A E L+  +++  S P K EE GDP   +NGK   G+  Q+   +   
Sbjct: 238 RAVVQAEGDLDRAEEVLKGTKYEEFSVPVKQEECGDPLTPSNGKLIVGIGYQNSDVERSE 297

Query: 300 IPSPN-QLRKDEKDFNYTKAATTIGVTSESSNKNM-QPLKRIQPKSEWVRPQQATIPADK 357
           IPSP     +D+K+FNYTK+ +    T+ES NK + QP+KR + K +W +PQQ+   ADK
Sbjct: 298 IPSPGLHPTRDDKNFNYTKSPS----TTESVNKMLAQPMKRPELKLDWPKPQQSAALADK 353

Query: 358 RWPPSAGANPSVSYSLASPLQVSAPPA-KSEALYMSVGGDFKNL-----QPGAARDPMVV 411
           RWPP+ G  PS SYSL S    S  PA + EA Y++ G +FKN      QP      MV+
Sbjct: 354 RWPPTTGQVPSASYSLPSSPSPSPQPAVRVEARYLASGNEFKNFQQQQQQPANRESVMVM 413

Query: 412 MQRPQTANAKQVPATSMSSSPPGNAASWYPTNSVEAMRSNGFIS--HPPSTMSPSPNYLS 469
            QRPQ      VP +SMS+ P     SW+P  S+E M+SNGF+   + PS  SPSPN+L+
Sbjct: 414 RQRPQVVITNPVPTSSMSAPP----TSWHPAASIEIMKSNGFMQTHNIPSARSPSPNHLN 469

Query: 470 SNQMYHQLQYHPQQPFVAGNSNSVDPQVT-SRGN-NIWNR-TGASPTXXXXXXXXXXXXX 526
            NQ+Y QLQY  Q+ F   N+N VDP  + +RGN   W R T +SP              
Sbjct: 470 PNQVYQQLQYQNQKRFT--NNNQVDPHGSMARGNGGQWTRNTASSPPISAASSLGLFSAV 527

Query: 527 XXXXXXXXXXPVDWSTGGSVQFDYTSIDWSLDRGLA-SPRSNPLWLGLSPYSKTSAHTYD 585
                     P+DW +GGSV  DYT+IDWSLD+ L+ + R N  W GL    K+S+  YD
Sbjct: 528 GSAGTSGASSPIDWISGGSV--DYTNIDWSLDQSLSQNSRVNGNWSGL----KSSSQIYD 581

Query: 586 SSASGAAAQLPMRSVPSNGSIVPMPXXXXXXXXXXXXXXXXXXXXXXPFEGKDLFSLPRQ 645
            + +  +    M    +N + V M                       PFEGKD+FSL RQ
Sbjct: 582 ENMNRYSLNGSMGGRLNNSNGVSM-ENSGAGVIVETQQAATSPDWTSPFEGKDIFSLSRQ 640

Query: 646 FVSSPSL 652
           +V SPSL
Sbjct: 641 YV-SPSL 646


>AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr5:3916229-3918088
           REVERSE LENGTH=619
          Length = 619

 Score =  400 bits (1028), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 266/669 (39%), Positives = 374/669 (55%), Gaps = 76/669 (11%)

Query: 1   MSPASRSKSKDKKACKEAQKASAKPTGSGNAVAGIPTSGYNPLLGTFHTLDMSPSPATSP 60
           MS AS+ KS+DKK   ++QK  +K +GS    + +   GYNPLLGTF T++   +  +S 
Sbjct: 1   MSSASKMKSRDKKVMNDSQKTPSKASGSMGG-SSVVVGGYNPLLGTFQTIESLSATGSSS 59

Query: 61  IHSNSRFRNIDETDEHPGSSVVAGLEYDSVSNNGSWSGESEDHKEK--TSNPAVRLESLP 118
           +H+N RFR+IDE+D         G + DSVSNNGSWSGESEDHKEK  +++ A + E +P
Sbjct: 60  LHNNGRFRHIDESDS-------TGADCDSVSNNGSWSGESEDHKEKVPSTSIAAKQEIIP 112

Query: 119 GADNDKREKIRQKNERKHQRQRERRAQELHEKCCGYLMSRKLEALAQQLVAMGFSHERAT 178
           GADNDKR+K+R KNERKHQRQ+E+RAQELHE+CC YLMSRKLE  AQ +++MG  HERAT
Sbjct: 113 GADNDKRDKMRLKNERKHQRQKEKRAQELHERCCQYLMSRKLEVHAQLIISMGIPHERAT 172

Query: 179 MALIMNEGRVEESVAWLFE--GSEEADSHKDKNFNDNLKIDISEELARVADMETRYGCSK 236
            AL++NEG++EES+ WLF+  G++ AD   D   + NLK+DIS+EL R+ ++ET+Y C+K
Sbjct: 173 YALMLNEGKIEESINWLFDDGGAKVADKKLDPT-SGNLKLDISQELGRILELETKYKCTK 231

Query: 237 QEVERVIVNYEGDLDKAAETLREARHDPPSAPPKPEETGDPFIINNGKQSGVV-SQSPRP 295
           Q+VER +V  EGD++KA E LR  + D  +A  KPE+  D   +NN K   V+ SQ+   
Sbjct: 232 QDVERAVVTAEGDIEKAEEALRRQKQDQSTASRKPEDISDSTSVNNSKVPSVLTSQNTVG 291

Query: 296 QTKP----IPSPNQLRKDEKDFNYTKAATTIGVTSESSNKNMQPLKRIQPKSEWVRPQQ- 350
           Q +P     P+  +   D K+  Y + ++ I  + ES N+++  L+RI  K +W++ QQ 
Sbjct: 292 QLQPNSGMYPAGREEALDRKNLGYPRGSSYI--SGESENQSVNSLERIHMKLQWMKLQQN 349

Query: 351 ATIPADKRWPPSAGANPSVSYSLASPLQVSAPPAKSEALYMSVGGD-FKNLQPGAARDPM 409
           A +  +KR P              +PL  S      E  Y++  GD FK LQ    R+P+
Sbjct: 350 APLEENKRIPYQQ-----------TPLSRST----EETHYVTALGDQFKRLQQQDMREPV 394

Query: 410 VVMQ-------RPQTANAKQVPATSMSSSPPGNAAS---WYPTNSVEAMRSNGFISHPPS 459
           +VMQ       R Q+AN   +P ++M++S  G AA+   W+P N  EA +SNG++   PS
Sbjct: 395 MVMQQQQQQQQRSQSANTNVLPVSTMNASFTGAAAAGSGWHPANRSEAAQSNGYL---PS 451

Query: 460 TMSPSPNYLSSNQMYHQLQYHPQQPFVAGNSNSVDPQVTSRGNNIWNRTGASPTXXXXXX 519
              P PN L+SN MY QLQY   Q  V  N + +               G          
Sbjct: 452 RSLP-PNDLNSNLMYQQLQYQQYQGQVNNNGHRMAGSSAPPAVAPAASLGL--------- 501

Query: 520 XXXXXXXXXXXXXXXXXPVDWSTGGSV-QFDYTSIDWSLDRGLASPRSNPLWLGLSPYSK 578
                             +DW+T GS+   DY +IDWSLD+GLA  R +  ++  S    
Sbjct: 502 ----FSGFGSLAGSSSSGLDWNTDGSLGHLDYNNIDWSLDKGLACVRPSQQYVAASSPYS 557

Query: 579 TSAHTYDSSASGAAAQLPMRSVPSNGSIVPMPXXXXXXXXXXXXXXXXXXXXXXPFEGKD 638
            ++  Y++  +G    +       NG  V M                       PFEGKD
Sbjct: 558 AASSPYEAHMNGRTRMM----TNGNGMGVAM-------GVQEAALVGNGREWTSPFEGKD 606

Query: 639 LFSLPRQFV 647
           LFSL RQ+V
Sbjct: 607 LFSLSRQYV 615