Miyakogusa Predicted Gene

Lj2g3v3007310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007310.1 Non Chatacterized Hit- tr|D1R967|D1R967_9CHLA
Putative uncharacterized protein OS=Parachlamydia
acan,33.33,7e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Trp_Tyr_perm,Tryptophan/tyrosine permease,CUFF.39574.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19500.1 | Symbols:  | Tryptophan/tyrosine permease | chr5:65...   385   e-107
AT2G33260.1 | Symbols:  | Tryptophan/tyrosine permease | chr2:14...    60   1e-09

>AT5G19500.1 | Symbols:  | Tryptophan/tyrosine permease |
           chr5:6579019-6581699 FORWARD LENGTH=505
          Length = 505

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/224 (86%), Positives = 209/224 (93%)

Query: 79  RLFSNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVTCIFCWAFM 138
           RLFSNLNQ+TLKRE GSLSSAIFLVAGTTVGAGILAIPAVTQE+GFLASAV CI CWAFM
Sbjct: 93  RLFSNLNQSTLKRESGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAVACILCWAFM 152

Query: 139 VVTGLLVAEVNVSTMCELGSGGVSLVSMARRTLGAAGVQISCWSYIFIHYALLVAYIARS 198
           VVTGLLVAEVNV+TM ELGSGGVSLVSMA+RTLG+ GVQ+  WSY+ IHY LLVAYIARS
Sbjct: 153 VVTGLLVAEVNVNTMSELGSGGVSLVSMAKRTLGSVGVQVVSWSYLLIHYTLLVAYIARS 212

Query: 199 SDILTKFLGIPIWESATLFSLIFGGICFFGSQRFIGAVNGVLVFGIISSFAALVAVASGD 258
           S ILT FLGIPIWESATLFSLIFGG+CFFGSQRFIGA NGVLVFG+I+SFAALVAVASGD
Sbjct: 213 SGILTNFLGIPIWESATLFSLIFGGLCFFGSQRFIGAANGVLVFGVIASFAALVAVASGD 272

Query: 259 IHLDALLKANFQAAPMSLPIIALSFVYQNVVPVLCTNLEGDLLK 302
           +H +ALLKANF+A PMS+PIIALSFVYQNVVPVLCT+LEGDL +
Sbjct: 273 LHWEALLKANFEAVPMSVPIIALSFVYQNVVPVLCTDLEGDLPR 316


>AT2G33260.1 | Symbols:  | Tryptophan/tyrosine permease |
           chr2:14100840-14102252 REVERSE LENGTH=436
          Length = 436

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 7/222 (3%)

Query: 91  REPGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVTCIFCWAFMVVTGLLVAEVNV 150
           ++  S  +A+ L+ GT VG G+L +PA T  +G + S +  +  W +++ + LLVAE++ 
Sbjct: 11  KKGKSFWAAVSLIIGTAVGPGMLGLPAATIRSGSIPSTIALLCSWVYVISSILLVAELSF 70

Query: 151 STMCELGSGGVSLVSMARRTLGAAGVQISCWSYIFIHYALLVAYIARSSDILTK-FLGIP 209
           + M E  +  VS   +A ++ G        + Y  + ++L+VA ++    I+++ F  + 
Sbjct: 71  AAMEEDNAAEVSFTGLATKSFGNKFGVFVAFVYASLSFSLMVACVSGIGSIVSQWFPSMN 130

Query: 210 IWESATLFSLIFGGICFFGSQRFIGAVNGVLVFGIISSFAALVAVASGDIHLDALLKANF 269
            + +  +F L+ G +  F     I   N  L F ++ S  +LVA+       + L     
Sbjct: 131 PFLANAIFPLVSGILIGFFPFNAIDFTNRGLCFLMLFSITSLVAIGLSVARSNVLASFGQ 190

Query: 270 QAAPMSL-----PIIALSFVYQNVVPVLCTNLEGDLLKECNN 306
               +S+     P++ L+  +  + P +C NL GD + +   
Sbjct: 191 SCWKVSMVLPAVPVMVLTLGFHVITPFIC-NLAGDSVSDARR 231