Miyakogusa Predicted Gene

Lj2g3v2948500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2948500.1 Non Chatacterized Hit- tr|I1JIP4|I1JIP4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.79,0,seg,NULL;
HMG-CoA_red,Hydroxymethylglutaryl-CoA reductase, class I/II;
HMG_COA_REDUCTASE_4,Hydroxyme,CUFF.39512.1
         (544 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76490.1 | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglut...   790   0.0  
AT2G17370.1 | Symbols: HMG2, HMGR2 | 3-hydroxy-3-methylglutaryl-...   699   0.0  

>AT1G76490.1 | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy
           methylglutaryl CoA reductase 1 | chr1:28695801-28698206
           FORWARD LENGTH=642
          Length = 642

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/525 (72%), Positives = 436/525 (83%), Gaps = 14/525 (2%)

Query: 28  LTNAVFFTLFFSVIYFLLHRWRDKIRSSTPLHVVTLSEITAIVSLIASFIYLLGFFGIDF 87
           LTNAVFFTLFFSV Y+LLHRWRDKIR +TPLHVVT++E+ AI++LIASFIYLLGFFGIDF
Sbjct: 107 LTNAVFFTLFFSVAYYLLHRWRDKIRYNTPLHVVTITELGAIIALIASFIYLLGFFGIDF 166

Query: 88  VQSFISRASNDIWEEDDDVSAADNXXXXXXXXXXXXXXXXXX--------------XXIV 133
           VQSFISRAS D W+  D +   D+                                  IV
Sbjct: 167 VQSFISRASGDAWDLADTIDDDDHRLVTCSPPTPIVSVAKLPNPEPIVTESLPEEDEEIV 226

Query: 134 RSVVEGDTPSYALESRLGDCRRAAAIRREALQRLTGRSLEGLPLEGFDYESILGQCCEMP 193
           +SV++G  PSY+LESRLGDC+RAA+IRREALQR+TGRS+EGLPL+GFDYESILGQCCEMP
Sbjct: 227 KSVIDGVIPSYSLESRLGDCKRAASIRREALQRVTGRSIEGLPLDGFDYESILGQCCEMP 286

Query: 194 VGYVQIPVGVAGPLLLDGFEHTVPMATTEGCLVASTNRGCKAIYASGGASSVVLKDAMSR 253
           VGY+QIPVG+AGPLLLDG+E++VPMATTEGCLVASTNRGCKA++ SGGA+S VLKD M+R
Sbjct: 287 VGYIQIPVGIAGPLLLDGYEYSVPMATTEGCLVASTNRGCKAMFISGGATSTVLKDGMTR 346

Query: 254 APVVRFATAKRAAQLKFFLEDPLNFDTLAVVFNRSSRFARLQGIQCAMAGKNIYLRFTCS 313
           APVVRFA+A+RA++LKFFLE+P NFDTLAVVFNRSSRFARLQ ++C +AGKN Y+RF CS
Sbjct: 347 APVVRFASARRASELKFFLENPENFDTLAVVFNRSSRFARLQSVKCTIAGKNAYVRFCCS 406

Query: 314 TGDAMGMNMVSKGVQNVLDFLQNDFPDMDIIGISGNYCSDKKPAAINWIEGRGKSVVCEA 373
           TGDAMGMNMVSKGVQNVL++L +DFPDMD+IGISGN+CSDKKPAA+NWIEGRGKSVVCEA
Sbjct: 407 TGDAMGMNMVSKGVQNVLEYLTDDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA 466

Query: 374 IIKEDVVKKVLKTNVAALVELNMLKNXXXXXXXXXXXXFNAHASNIVSAVFLATGQDPAQ 433
           +I+ ++V KVLKT+VAALVELNMLKN            FNAHASNIVSAVF+ATGQDPAQ
Sbjct: 467 VIRGEIVNKVLKTSVAALVELNMLKNLAGSAVAGSLGGFNAHASNIVSAVFIATGQDPAQ 526

Query: 434 NVESSHCITMMEAVNDGRDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESP 493
           NVESS CITMMEA+NDG+D+HISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGAS ESP
Sbjct: 527 NVESSQCITMMEAINDGKDIHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASTESP 586

Query: 494 GSNSRXXXXXXXXXXXXXXXSLMSAIAAGQLVNSHMKYNRSSKDV 538
           G N+R               SLMSAIAAGQLV SHMKYNRSS+D+
Sbjct: 587 GMNARRLATIVAGAVLAGELSLMSAIAAGQLVRSHMKYNRSSRDI 631


>AT2G17370.1 | Symbols: HMG2, HMGR2 | 3-hydroxy-3-methylglutaryl-CoA
           reductase 2 | chr2:7550007-7551981 FORWARD LENGTH=562
          Length = 562

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/520 (65%), Positives = 407/520 (78%), Gaps = 13/520 (2%)

Query: 28  LTNAVFFTLFFSVIYFLLHRWRDKIRSSTPLHVVTLSEITAIVSLIASFIYLLGFFGIDF 87
           LTN  F +LFF+ +YFLL RWR+KIR+STPLHVV LSEI A++  +ASFIYLLGF GID 
Sbjct: 39  LTNTFFLSLFFATVYFLLSRWREKIRNSTPLHVVDLSEICALIGFVASFIYLLGFCGIDL 98

Query: 88  VQSFISRASNDIWEEDDDVSAADN---------XXXXXXXXXXXXXXXXXXXXIVRSVVE 138
           +  F S + +D+W  D  +    +                             IV+ V++
Sbjct: 99  I--FRSSSDDDVWVNDGMIPCNQSLDCREVLPIKPNSVDPPRESELDSVEDEEIVKLVID 156

Query: 139 GDTPSYALESRLGDCRRAAAIRREALQRLTGRSLEGLPLEGFDYESILGQCCEMPVGYVQ 198
           G  PSY+LE++LGDC+RAAAIRREA+QR+TG+SL GLPLEGFDY SILGQCCEMPVGYVQ
Sbjct: 157 GTIPSYSLETKLGDCKRAAAIRREAVQRITGKSLTGLPLEGFDYNSILGQCCEMPVGYVQ 216

Query: 199 IPVGVAGPLLLDGFEHTVPMATTEGCLVASTNRGCKAIYASGGASSVVLKDAMSRAPVVR 258
           IPVG+AGPLLLDG E++VPMATTEGCLVASTNRG KAI+ SGGA SV++KDAM+RAPVVR
Sbjct: 217 IPVGIAGPLLLDGVEYSVPMATTEGCLVASTNRGFKAIHLSGGAFSVLVKDAMTRAPVVR 276

Query: 259 FATAKRAAQLKFFLEDPLNFDTLAVVFNRSSRFARLQGIQCAMAGKNIYLRFTCSTGDAM 318
           F +A+RAA + F+L+DP NF+ L+++FN+SSRFARLQ I C +AG+N+Y RF CSTGDAM
Sbjct: 277 FPSARRAALVMFYLQDPSNFERLSLIFNKSSRFARLQSITCTIAGRNLYPRFACSTGDAM 336

Query: 319 GMNMVSKGVQNVLDFLQNDFPDMDIIGISGNYCSDKKPAAINWIEGRGKSVVCEAIIKED 378
           GMNMVSKGVQNVLDF++++FPDMD+IGISGNYCSDKK +A+NWIEGRGK VVCEA IK +
Sbjct: 337 GMNMVSKGVQNVLDFVKSEFPDMDVIGISGNYCSDKKASAVNWIEGRGKHVVCEAFIKAE 396

Query: 379 VVKKVLKTNVAALVELNMLKNXXXXXXXXXXXXFNAHASNIVSAVFLATGQDPAQNVESS 438
           +V+KVLKT+V ALVELN LKN            FNAH+SNIVSAVF+ATGQDPAQNVESS
Sbjct: 397 IVEKVLKTSVEALVELNTLKNLVGSAMAGSLGGFNAHSSNIVSAVFIATGQDPAQNVESS 456

Query: 439 HCITMMEAVNDGRDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSR 498
           HC+TM+  + DG DLHISV+MP IEVGTVGGGTQLASQ+ACLNLLGVKG++ E PGSN++
Sbjct: 457 HCMTMI--LPDGDDLHISVSMPCIEVGTVGGGTQLASQAACLNLLGVKGSNNEKPGSNAQ 514

Query: 499 XXXXXXXXXXXXXXXSLMSAIAAGQLVNSHMKYNRSSKDV 538
                          SLMSAIAAGQLV SHMKYNRSS+D+
Sbjct: 515 QLARIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDI 554